Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005921

Physical Location & Seq

Genomic Coordinates Forward (+)

41679703 .. 41685873

Gene Structure 6171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0334800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGGCTTCGGGGCCTATAGTTGGAGAAGGTGATGGAACCAGAGAGAAGCAGAGGTACTCGGAAAGCAAGGTCTATACTCGAAAAGCTTTCAAAGGCCCCAAGAAAAATCTCAACAACAACGCCAAAACAAACTCTACCACCACAACCGCCTTAGCCGCCCCGACCTCCACCGCCACCGCCGCCGCCAACCACGAAAAGAGTAACGGCGAGAAGAAGGACGAGGACAACAGGAGTAACAAGAATGACAATTCGACTCAAGCTCCAGCTGAGGTGATTGGTTTGGAGGATGGGAATTCAGCTCAGCCTCCAGCTCCGGTTTCCGAGGATGGGAATTCAGCTCAGCCGCCAGCTCAGGCGTCCGAGGATGGGAATTCTACCCTGCCGCCGCAACAGCCGCAGTCGGTTTTGCGGGTTGAGGCAGCCTCTGACGATTCCTCGAGCCTGAACCGGCAAGAGCCTGCTGCGGCGGTGGTGGCACCGGCCACTCAGGATATACCTGCAGAGAATGGGGTTTCCAAACCGGAGTCGGACAGCCGAGTTAAGATCAATTTAGCTTCGAGGTCGAAGCAAGAGGTGCGTGAGCTTAGAAGGAAGCTTGAAAGTGAGCTGGATATGGTTCGAGGTTTGGTGAAGAAGATTGAGACCAAGCAGGGGCAGATTGGTGGGTTAAGTTACCCCCATGTTTCTGCAAATGATGGGGTTAATAATAATGTCATGTTGAGGCGGGTTCACTCGGAGGTTGCTTCCGGTGGTATTCCTCGTGAGGCTACTAGGCCTTTGCATCAGCTGAGTATATCAGTATTGGAGAATAGTCAGGGAGGGATTGATAACGTGGAGAAAGAGAAGAGAACCCCCAAGGCAAACCAGTTCTACCAAAGTTCTGAGTTTTTGCTGGCCAAGGATAAGTTTCCACCTGCTGAAAGTAACAAGAAGACGAAATTGAATCTGAAGAAGCAGCAGCAAAGTGGAGGAGAGTTGGGGCACAGGTATTCAATGGGCACCAAGTTTTTCAAGAGTTGTAGTTCTTTGCTTGAGAAATTGATGAAACACAAGCATAGTTGGGTGTTTAATGAACCTGTGGATGCCGAAAAGCTTGGTTTGCATGATTATCACATCATTATCAAGAGTCCAATGGACTTGGGTACGATCAAATCCAGGCTGATCAAGAATTGGTACAAGTCTCCCAAAGAATTTGCAGAAGATGTGAGACTTACATTTGACAATGCCATGACCTATAATCCGCCCGGGCAGGATGTTCATGTCATGGCAGAACAGCTAGCCAAGATTTTCGAGGAAAGGTGGGCTATAATAGAGTCAGATTATAATCGTGAGATAAGGTTCGGCTATGATTATGGGACTGGTCTCCCTACACAACCAATACCAAGAAAGGCTCCTCCACCACCACCTGCTCTTGATATGCGAAGGGTCTTGGATAGGTCTGAGTCCATATCACATCATGGTGATCCCAGGCCAAAACCCATGACTATTACTCCTAGGACCCCTGCTCCGAAGAAGCCTAAGGCGAAAGATCCTCATAAAAGGGACATGACTTATGAAGAGAAACAAAAGCTTAGCACAAGCCTCCAGGGTCTACCTTCAGAGAAGCTAGATACCATTGTACAGATTATTAGGAAAAGGAATTCAGCCGTCTTCCAGCATGATGATGAAATTGAAGTGGACATTGATAGCGTGGATGCTGAGACTCTTTGGGAGCTTGATAGGTATGTAACCAACTATAAGAAGAGTTTGAGCAAACACAAGCGAAAAGCTGAACTTGCTATGCAAGCCAGAACAGAAACTGAGCAGAATGTCCTGCCGCAGGCCCAGGCCCCCAGTGTGGATGAGGTTCCAAAAGAAACCACAACAGATCCAAAGATAGTTTCGTCTTCAACACCTATTCAAAGGGATAACCAGGGTGATAATAGGAGTAGGTCGAGTAGTTCAAGCAGCTCTAGCAGTGATTCTGGATCTTCCTCGAGTGACTCTGATAGTGATAGTTCATCAGACTCTGGATCTGATGCCGGATCGCCAAGGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF642

Protein Analysis

679

Amino Acids

74.79

Weight (kDa)

8.17

Isoelectric Point (pI)

55.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	340 - 424	6.9e-20	Bromodomain
BET	PF17035	516 - 577	2.6e-22	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005921)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g30480
malus_domestica	MD17G1203500.v1.1
prunus_persica	Prupe.3G078400_v2.0.a1
pyrus_communis	pycom1094g00040 pycom17g20690
rosa_chinensis	RchiOBHm_Chr2g0136831 RchiOBHm_Chr2g0136841
rosa_laevigata	RLG00000019581 RLG00000019582
rosa_multiflora	Rmu_sc0001299.1_g000007 Rmu_sc0001299.1_g000009 Rmu_sc0001368.1_g000003 Rmu_sc0001368.1_g000004
rosa_roxburghii	Rroxscaffold_2G00107940
rosa_rugosa	Rorug02G0334400 Rorug02G0334500 Rorug02G0334600 Rorug02G0334700 Rorug02G0334800
rosa_samantha	Rh2AG384500 Rh2AG384700 Rh2BG391700 Rh2CG371100 Rh2CG371200 Rh2DG408000 Rh2DG408100
rosa_wichuraiana	Rw2G031450 Rw2G031460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1323
AarI	CACCTGC	2 cut(s)	922, 1414
Acc36I	ACCTGC	3 cut(s)	505, 922, 1414
AccB1I	GGYRCC	2 cut(s)	475, 998
AccI	GTMKAC	1 cut(s)	1591
AclWI	GGATC	6 cut(s)	1457, 1523, 1862, 1975, 2020, 2032
AcoI	YGGCCR	2 cut(s)	480, 894
AcsI	RAATTY	5 cut(s)	292, 331, 370, 1190, 1639
AcuI	CTGAAG	2 cut(s)	968, 1581
AcyI	GRCGYC	1 cut(s)	356
AfaI	GTAC	4 cut(s)	56, 1144, 1175, 1620
AfiI	CCNNNNNNNGG	6 cut(s)	20, 327, 366, 651, 1819, 1837
AgsI	TTSAA	9 cut(s)	91, 599, 943, 993, 1012, 1673, 1890, 1901, 1944
AjnI	CCWGG	5 cut(s)	1154, 1466, 1584, 1824, 1911
AjuI	GAANNNNNNNTTGG	2 cut(s)	1864, 1896
Alw26I	GTCTC	5 cut(s)	635, 1185, 1201, 1367, 1694
AlwI	GGATC	6 cut(s)	1457, 1523, 1862, 1975, 2020, 2032
AlwNI	CAGNNNCTG	3 cut(s)	425, 1799, 2009
Ama87I	CYCGRG	3 cut(s)	436, 1244, 1975
AoxI	GGCC	8 cut(s)	11, 94, 480, 773, 894, 1469, 1821, 1827
ApeKI	GCWGC	5 cut(s)	419, 461, 955, 958, 1947
ApoI	RAATTY	5 cut(s)	292, 331, 370, 1190, 1639
AspA2I	CCTAGG	1 cut(s)	1493
AspS9I	GGNCC	5 cut(s)	11, 95, 1497, 1822, 1828
AsuC2I	CCSGG	2 cut(s)	1245, 1246
AsuHPI	GGTGA	5 cut(s)	41, 283, 640, 1472, 1928
AsuNHI	GCTAGC	1 cut(s)	1276
AvaI	CYCGRG	3 cut(s)	436, 1244, 1975
AvaII	GGWCC	1 cut(s)	1497
AvrII	CCTAGG	1 cut(s)	1493
AxyI	CCTNAGG	1 cut(s)	1518
BaeGI	GKGCMC	2 cut(s)	984, 1001
BaeI	ACNNNNGTAYC	2 cut(s)	1602, 1635
BalI	TGGCCA	1 cut(s)	896
BanI	GGYRCC	2 cut(s)	475, 998
BarI	GAAGNNNNNNTAC	2 cut(s)	38, 70
BauI	CACGAG	1 cut(s)	759
BbsI	GAAGAC	3 cut(s)	938, 1642, 1878
BbvCI	CCTCAGC	1 cut(s)	267
BbvI	GCAGC	5 cut(s)	431, 448, 967, 970, 1959
BccI	CCATC	5 cut(s)	26, 281, 320, 359, 689
BceAI	ACGGC	2 cut(s)	220, 1631
BciT130I	CCWGG	5 cut(s)	1156, 1468, 1586, 1826, 1913
BclI	TGATCA	1 cut(s)	1161
BcnI	CCSGG	2 cut(s)	1245, 1246
BcoDI	GTCTC	5 cut(s)	635, 1185, 1201, 1367, 1694
BfaI	CTAG	5 cut(s)	771, 1277, 1494, 1607, 1953
BfmI	CTRYAG	2 cut(s)	15, 498
BfuAI	ACCTGC	3 cut(s)	505, 922, 1414
BlnI	CCTAGG	1 cut(s)	1493
BlpI	GCTNAGC	3 cut(s)	300, 339, 1571
Bme1390I	CCNGG	7 cut(s)	1156, 1245, 1246, 1468, 1586, 1826, 1913
Bme18I	GGWCC	1 cut(s)	1497
BmeT110I	CYCGRG	3 cut(s)	436, 1244, 1975
BmgT120I	GGNCC	5 cut(s)	11, 95, 1497, 1822, 1828
BmiI	GGNNCC	9 cut(s)	12, 37, 97, 477, 1000, 1392, 1499, 1830, 1848
BmrFI	CCNGG	7 cut(s)	1156, 1245, 1246, 1468, 1586, 1826, 1913
BmrI	ACTGGG	1 cut(s)	1827
BmsI	GCATC	4 cut(s)	790, 1072, 1684, 2008
BmtI	GCTAGC	1 cut(s)	1280
BmuI	ACTGGG	1 cut(s)	1827
BpiI	GAAGAC	3 cut(s)	938, 1642, 1878
BplI	GAGNNNNNCTC	2 cut(s)	407, 439
BpmI	CTGGAG	3 cut(s)	246, 291, 1568
Bpu10I	CCTNAGC	3 cut(s)	151, 267, 351
Bpu1102I	GCTNAGC	3 cut(s)	300, 339, 1571
BpuEI	CTTGAG	2 cut(s)	240, 1052
BpuMI	CCSGG	2 cut(s)	1245, 1246
BsaBI	GATNNNNATC	1 cut(s)	1323
BsaHI	GRCGYC	1 cut(s)	356
BsaI	GGTCTC	2 cut(s)	635, 1367
BsaWI	WCCGGW	3 cut(s)	313, 520, 746
BsaXI	ACNNNNNCTCC	6 cut(s)	244, 274, 1474, 1489, 1504, 1519
Bsc4I	CCNNNNNNNGG	6 cut(s)	20, 327, 366, 651, 1819, 1837
Bse118I	RCCGGY	2 cut(s)	447, 478
Bse1I	ACTGG	3 cut(s)	865, 1363, 1833
Bse21I	CCTNAGG	1 cut(s)	1518
Bse8I	GATNNNNATC	1 cut(s)	1323
BseBI	CCWGG	5 cut(s)	1156, 1468, 1586, 1826, 1913
BseGI	GGATG	7 cut(s)	292, 331, 370, 1087, 1258, 1699, 1846
BseJI	GATNNNNATC	1 cut(s)	1323
BseLI	CCNNNNNNNGG	6 cut(s)	20, 327, 366, 651, 1819, 1837
BseNI	ACTGG	3 cut(s)	865, 1363, 1833
BseRI	GAGGAG	2 cut(s)	984, 1383
BseSI	GKGCMC	2 cut(s)	984, 1001
BseXI	GCAGC	5 cut(s)	431, 448, 967, 970, 1959
BshFI	GGCC	8 cut(s)	13, 96, 482, 775, 896, 1471, 1823, 1829
BshNI	GGYRCC	2 cut(s)	475, 998
BsiHKCI	CYCGRG	3 cut(s)	436, 1244, 1975
BsiSI	CCGG	7 cut(s)	314, 448, 479, 521, 747, 1245, 2022
BslFI	GGGAC	2 cut(s)	1369, 1556
BslI	CCNNNNNNNGG	6 cut(s)	20, 327, 366, 651, 1819, 1837
BsmAI	GTCTC	5 cut(s)	635, 1185, 1201, 1367, 1694
BsmFI	GGGAC	2 cut(s)	1369, 1556
BsnI	GGCC	8 cut(s)	13, 96, 482, 775, 896, 1471, 1823, 1829
Bso31I	GGTCTC	2 cut(s)	635, 1367
BsoBI	CYCGRG	3 cut(s)	436, 1244, 1975
Bsp1286I	GDGCHC	2 cut(s)	984, 1001
Bsp1407I	TGTACA	1 cut(s)	1618
Bsp143I	GATC	9 cut(s)	543, 1146, 1161, 1462, 1528, 1867, 1967, 2012, 2024
Bsp1720I	GCTNAGC	3 cut(s)	300, 339, 1571
BspANI	GGCC	8 cut(s)	13, 96, 482, 775, 896, 1471, 1823, 1829
BspLI	GGNNCC	9 cut(s)	12, 37, 97, 477, 1000, 1392, 1499, 1830, 1848
BspMAI	CTGCAG	1 cut(s)	502
BspMI	ACCTGC	3 cut(s)	505, 922, 1414
BspOI	GCTAGC	1 cut(s)	1280
BspPI	GGATC	6 cut(s)	1457, 1523, 1862, 1975, 2020, 2032
BspT107I	GGYRCC	2 cut(s)	475, 998
BspTNI	GGTCTC	2 cut(s)	635, 1367
BsrFI	RCCGGY	2 cut(s)	447, 478
BsrGI	TGTACA	1 cut(s)	1618
BsrI	ACTGG	3 cut(s)	865, 1363, 1833
BssAI	RCCGGY	2 cut(s)	447, 478
BssMI	GATC	9 cut(s)	543, 1146, 1161, 1462, 1528, 1867, 1967, 2012, 2024
BssNI	GRCGYC	1 cut(s)	356
BssSI	CACGAG	1 cut(s)	759
BssT1I	CCWWGG	4 cut(s)	855, 897, 1493, 2030
Bst2BI	CACGAG	1 cut(s)	759
Bst2UI	CCWGG	5 cut(s)	1156, 1468, 1586, 1826, 1913
Bst6I	CTCTTC	3 cut(s)	839, 1551, 1736
BstACI	GRCGYC	1 cut(s)	356
BstAPI	GCANNNNNTGC	1 cut(s)	574
BstAUI	TGTACA	1 cut(s)	1618
BstC8I	GCNNGC	6 cut(s)	348, 459, 894, 1278, 1785, 1821
BstENI	CCTNNNNNAGG	1 cut(s)	1817
BstF5I	GGATG	7 cut(s)	292, 331, 370, 1087, 1258, 1699, 1846
BstKTI	GATC	9 cut(s)	546, 1149, 1164, 1465, 1531, 1870, 1970, 2015, 2027
BstMAI	GTCTC	5 cut(s)	635, 1185, 1201, 1367, 1694
BstMBI	GATC	9 cut(s)	543, 1146, 1161, 1462, 1528, 1867, 1967, 2012, 2024
BstNI	CCWGG	5 cut(s)	1156, 1468, 1586, 1826, 1913
BstSCI	CCNGG	7 cut(s)	1154, 1243, 1244, 1466, 1584, 1824, 1911
BstSFI	CTRYAG	2 cut(s)	15, 498
BstSLI	GKGCMC	2 cut(s)	984, 1001
BstV1I	GCAGC	5 cut(s)	431, 448, 967, 970, 1959
BstV2I	GAAGAC	3 cut(s)	938, 1642, 1878
BstX2I	RGATCY	4 cut(s)	1528, 1867, 1967, 2012
BstYI	RGATCY	4 cut(s)	1528, 1867, 1967, 2012
Bsu36I	CCTNAGG	1 cut(s)	1518
BsuRI	GGCC	8 cut(s)	13, 96, 482, 775, 896, 1471, 1823, 1829
BtsCI	GGATG	7 cut(s)	292, 331, 370, 1087, 1258, 1699, 1846
BtsI	GCAGTG	1 cut(s)	1963
BtsIMutI	CAGTG	2 cut(s)	1840, 1963
BveI	ACCTGC	3 cut(s)	505, 922, 1414
Cac8I	GCNNGC	6 cut(s)	348, 459, 894, 1278, 1785, 1821
CaiI	CAGNNNCTG	3 cut(s)	425, 1799, 2009
Cfr10I	RCCGGY	2 cut(s)	447, 478
Cfr13I	GGNCC	5 cut(s)	11, 95, 1497, 1822, 1828
Cfr9I	CCCGGG	1 cut(s)	1244
CseI	GACGC	1 cut(s)	345
Csp6I	GTAC	4 cut(s)	55, 1143, 1174, 1619
CviQI	GTAC	4 cut(s)	55, 1143, 1174, 1619
DpnI	GATC	9 cut(s)	545, 1148, 1163, 1464, 1530, 1869, 1969, 2014, 2026
DpnII	GATC	9 cut(s)	543, 1146, 1161, 1462, 1528, 1867, 1967, 2012, 2024
EaeI	YGGCCR	2 cut(s)	480, 894
Eam1104I	CTCTTC	3 cut(s)	839, 1551, 1736
EarI	CTCTTC	3 cut(s)	839, 1551, 1736
EciI	GGCGGA	1 cut(s)	1230
Eco130I	CCWWGG	4 cut(s)	855, 897, 1493, 2030
Eco147I	AGGCCT	1 cut(s)	775
Eco31I	GGTCTC	2 cut(s)	635, 1367
Eco47I	GGWCC	1 cut(s)	1497
Eco57I	CTGAAG	2 cut(s)	968, 1581
Eco81I	CCTNAGG	1 cut(s)	1518
Eco88I	CYCGRG	3 cut(s)	436, 1244, 1975
EcoNI	CCTNNNNNAGG	1 cut(s)	1817
EcoO109I	RGGNCCY	4 cut(s)	11, 95, 1497, 1828
EcoRI	GAATTC	4 cut(s)	292, 331, 370, 1639
EcoRII	CCWGG	5 cut(s)	1154, 1466, 1584, 1824, 1911
EcoT14I	CCWWGG	4 cut(s)	855, 897, 1493, 2030
ErhI	CCWWGG	4 cut(s)	855, 897, 1493, 2030
FalI	AAGNNNNNCTT	2 cut(s)	1758, 1790
FaqI	GGGAC	2 cut(s)	1369, 1556
FauI	CCCGC	2 cut(s)	402, 717
FbaI	TGATCA	1 cut(s)	1161
FblI	GTMKAC	1 cut(s)	1591
FokI	GGATG	7 cut(s)	299, 338, 377, 1094, 1265, 1706, 1853
FspBI	CTAG	5 cut(s)	771, 1277, 1494, 1607, 1953
GsuI	CTGGAG	3 cut(s)	246, 291, 1568
HaeIII	GGCC	8 cut(s)	13, 96, 482, 775, 896, 1471, 1823, 1829
HapII	CCGG	7 cut(s)	314, 448, 479, 521, 747, 1245, 2022
HgaI	GACGC	1 cut(s)	345
Hin1I	GRCGYC	1 cut(s)	356
HindIII	AAGCTT	4 cut(s)	84, 593, 1091, 1568
HpaII	CCGG	7 cut(s)	314, 448, 479, 521, 747, 1245, 2022
HphI	GGTGA	5 cut(s)	41, 283, 640, 1472, 1928
Hpy166II	GTNNAC	3 cut(s)	730, 1592, 1678
Hpy188III	TCNNGA	9 cut(s)	488, 761, 1012, 1123, 1165, 1328, 1412, 1965, 2010
Hpy8I	GTNNAC	3 cut(s)	730, 1592, 1678
HpyAV	CCTTC	5 cut(s)	20, 208, 582, 1416, 1605
HpyCH4IV	ACGT	1 cut(s)	831
HpyCH4V	TGCA	6 cut(s)	500, 689, 781, 1102, 1196, 1783
HpySE526I	ACGT	1 cut(s)	831
Hsp92I	GRCGYC	1 cut(s)	356
Ksp22I	TGATCA	1 cut(s)	1161
Kzo9I	GATC	9 cut(s)	543, 1146, 1161, 1462, 1528, 1867, 1967, 2012, 2024
LmnI	GCTCC	5 cut(s)	265, 316, 1396, 1510, 1711
Lsp1109I	GCAGC	5 cut(s)	431, 448, 967, 970, 1959
LweI	GCATC	4 cut(s)	790, 1072, 1684, 2008
MaeI	CTAG	5 cut(s)	771, 1277, 1494, 1607, 1953
MaeII	ACGT	1 cut(s)	831
MaeIII	GTNAC	6 cut(s)	200, 233, 671, 923, 1726, 1979
MalI	GATC	9 cut(s)	545, 1148, 1163, 1464, 1530, 1869, 1969, 2014, 2026
MboI	GATC	9 cut(s)	543, 1146, 1161, 1462, 1528, 1867, 1967, 2012, 2024
MflI	RGATCY	4 cut(s)	1528, 1867, 1967, 2012
MhlI	GDGCHC	2 cut(s)	984, 1001
MlsI	TGGCCA	1 cut(s)	896
MluNI	TGGCCA	1 cut(s)	896
MlyI	GAGTC	8 cut(s)	247, 533, 1135, 1322, 1451, 1696, 1976, 2000
MmeI	TCCRAC	1 cut(s)	507
Mox20I	TGGCCA	1 cut(s)	896
MscI	TGGCCA	1 cut(s)	896
MseI	TTAA	4 cut(s)	540, 668, 702, 1068
MslI	CAYNNNNRTG	2 cut(s)	1458, 1662
Msp20I	TGGCCA	1 cut(s)	896
MspA1I	CMGCKG	2 cut(s)	266, 787
MspI	CCGG	7 cut(s)	314, 448, 479, 521, 747, 1245, 2022
MspR9I	CCNGG	7 cut(s)	1156, 1245, 1246, 1468, 1586, 1826, 1913
MvaI	CCWGG	5 cut(s)	1156, 1468, 1586, 1826, 1913
NciI	CCSGG	2 cut(s)	1245, 1246
NdeII	GATC	9 cut(s)	543, 1146, 1161, 1462, 1528, 1867, 1967, 2012, 2024
NheI	GCTAGC	1 cut(s)	1276
NlaIV	GGNNCC	9 cut(s)	12, 37, 97, 477, 1000, 1392, 1499, 1830, 1848
NmeAIII	GCCGAG	1 cut(s)	560
NmuCI	GTSAC	1 cut(s)	1979
PaeR7I	CTCGAG	2 cut(s)	436, 1975
PaqCI	CACCTGC	2 cut(s)	922, 1414
PceI	AGGCCT	1 cut(s)	775
PfeI	GAWTC	3 cut(s)	431, 943, 1961
PleI	GAGTC	8 cut(s)	247, 532, 1134, 1321, 1450, 1696, 1976, 2000
PpsI	GAGTC	8 cut(s)	247, 532, 1134, 1321, 1450, 1696, 1976, 2000
PpuMI	RGGWCCY	1 cut(s)	1497
PsiI	TTATAA	1 cut(s)	1323
Psp5II	RGGWCCY	1 cut(s)	1497
Psp6I	CCWGG	5 cut(s)	1154, 1466, 1584, 1824, 1911
PspGI	CCWGG	5 cut(s)	1154, 1466, 1584, 1824, 1911
PspN4I	GGNNCC	9 cut(s)	12, 37, 97, 477, 1000, 1392, 1499, 1830, 1848
PspPI	GGNCC	5 cut(s)	11, 95, 1497, 1822, 1828
PspPPI	RGGWCCY	1 cut(s)	1497
PspXI	VCTCGAGB	2 cut(s)	436, 1975
PstI	CTGCAG	1 cut(s)	502
PstNI	CAGNNNCTG	3 cut(s)	425, 1799, 2009
PsuI	RGATCY	4 cut(s)	1528, 1867, 1967, 2012
PvuII	CAGCTG	2 cut(s)	266, 787
RsaI	GTAC	4 cut(s)	56, 1144, 1175, 1620
RsaNI	GTAC	4 cut(s)	55, 1143, 1174, 1619
RseI	CAYNNNNRTG	2 cut(s)	1458, 1662
SaqAI	TTAA	4 cut(s)	540, 668, 702, 1068
Sau3AI	GATC	9 cut(s)	543, 1146, 1161, 1462, 1528, 1867, 1967, 2012, 2024
Sau96I	GGNCC	5 cut(s)	11, 95, 1497, 1822, 1828
SchI	GAGTC	8 cut(s)	247, 533, 1135, 1322, 1451, 1696, 1976, 2000
ScrFI	CCNGG	7 cut(s)	1156, 1245, 1246, 1468, 1586, 1826, 1913
SduI	GDGCHC	2 cut(s)	984, 1001
SfaNI	GCATC	4 cut(s)	790, 1072, 1684, 2008
SfcI	CTRYAG	2 cut(s)	15, 498
Sfr274I	CTCGAG	2 cut(s)	436, 1975
SinI	GGWCC	1 cut(s)	1497
SlaI	CTCGAG	2 cut(s)	436, 1975
SmaI	CCCGGG	1 cut(s)	1246
SmiMI	CAYNNNNRTG	2 cut(s)	1458, 1662
SmlI	CTYRAG	4 cut(s)	255, 436, 1031, 1975
SmoI	CTYRAG	4 cut(s)	255, 436, 1031, 1975
SrfI	GCCCGGGC	1 cut(s)	1246
SseBI	AGGCCT	1 cut(s)	775
SspMI	CTAG	5 cut(s)	771, 1277, 1494, 1607, 1953
StuI	AGGCCT	1 cut(s)	775
StyD4I	CCNGG	7 cut(s)	1154, 1243, 1244, 1466, 1584, 1824, 1911
StyI	CCWWGG	4 cut(s)	855, 897, 1493, 2030
TaiI	ACGT	1 cut(s)	834
TaqI	TCGA	9 cut(s)	79, 251, 437, 557, 563, 619, 1290, 1934, 1976
TatI	WGTACW	1 cut(s)	1618
TauI	GCSGC	9 cut(s)	158, 182, 185, 346, 385, 388, 397, 467, 1819
TfiI	GAWTC	3 cut(s)	431, 943, 1961
Tru1I	TTAA	4 cut(s)	540, 668, 702, 1068
Tru9I	TTAA	4 cut(s)	540, 668, 702, 1068
TscAI	CASTG	2 cut(s)	1840, 1963
TseFI	GTSAC	1 cut(s)	1979
TseI	GCWGC	5 cut(s)	419, 461, 955, 958, 1947
Tsp45I	GTSAC	1 cut(s)	1979
TspDTI	ATGAA	6 cut(s)	1058, 1086, 1247, 1569, 1680, 1989
TspMI	CCCGGG	1 cut(s)	1244
TspRI	CASTG	2 cut(s)	1840, 1963
VpaK11BI	GGWCC	1 cut(s)	1497
XagI	CCTNNNNNAGG	1 cut(s)	1817
XapI	RAATTY	5 cut(s)	292, 331, 370, 1190, 1639
XhoI	CTCGAG	2 cut(s)	436, 1975
XmaI	CCCGGG	1 cut(s)	1244
XmaJI	CCTAGG	1 cut(s)	1493
XmiI	GTMKAC	1 cut(s)	1591
XspI	CTAG	5 cut(s)	771, 1277, 1494, 1607, 1953

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.