Rorug02G0478500

No description available

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
60975318 .. 60980821
5504 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0478500.1

Sequence Viewer

Length: 3264 bp
ATGGCTGCCAAGGATTTTGCTGAATTCCAGTGGAAGAAGTTCTTGAGGTCTCTGTTAGAGGCAGAGTATGAATTATCAGGTTCCATAAATCTCATTTCTTACTTCAAAACAATCAAACAGATGTTAATAGATACACAGACGATTCCTTTTTCCGAGATAGCTGCAGCTGCAGGGATGGCATTGAATATGGTGTCATGGGAAAGGGATACTTACATTTTGGCTTACCGTTATCTCTTGGAGCTCAACTACGCATTGGCAGAGTGCCGAATCTTTGCAAAGGAGTTCAAGGAGCTTAACAAGAAGATCTTGCCCTTGAATCCTTCCACAGTTTATATCATCCTAAAGATGAAGAAGCGGCTGACGGCACTGGAGAGTAAGTTTTTCATTTTGGTGTGCAGCCCATCAACGTCTGTTTCTGTCATGACTGAGCAGAAAGCTATGGAATGCTTGGGATTCACTGAGAAGGATATAGTGGTGATAACGAAGAATTCAGAAGAAACTGTGGTATTTTCGGATGTGCAATTCGGGAGGCAGTATAGTTGTACATTGATGCTTAGGGACTTCAACTTGCTTACTGAAACTGGATTTAGGTCGATTGGGATAGTCGGCATGGCTGGAGTGGGTAAGTCCACCTTCTTAAAAAGTATTTTGGAATCGCATGACGTGCGCTACTTCGAGTTTTCTCCTATCATTCAGTTATGCTTGTCTGATATAATGCAAGAAAACCATGTCATAGACAGTACTAGTGCTAATGGGATCAGCATTAGCATTGTGAAACTTCTTCTTGAGAAGTTGGGGGAGGAGGAGACTGATATTTCTGGCGTTGGACTCGCTTCACTCTTGGAAAGGTTATCCAGTCTTTTATCAGGTAAAAAGTATTTGATTGCGTTGGATGATGTGTTACATATTATGGACTTCTATTCGGATTTGGGTTATGATCTTCCTAAAGGTGAGGCATTCGGGGATCGCCTATCGCATGGCTTGCCTAAGGATAGTGGTGGTTTAGTCATTGTTGTTAGTAGTAAACCAGTAGTGGCTCTAGATATGGTGGGGCTTCGCCAAAATTCTGTGCATAAGCGGCTAACCACACTCAAAAGGAAGTCTAAAGTACAGTCGACAACTTCGGTGGAATGTCCAGACCATCAAACACCTATAGCTAAAAGCCCCTCATCGATTTCTATGCCAAAAGAGAACACGAATGGGGAAGAAGAATGTTTGCCATTTACAGAAAATGTGCTACTACTTCCCAATGTAGGGAGGTCTAGGAACCACAGGGATTTTAGGGACTCTCGCTTGCTTGTTAGTGATCCAGCAGGAATTGGATTTACGGCCATCGGGATAGTTGGCATGGCAGGTGTCGGTAAGTCCACTTTCGTGCACAAGGTCTTGAAAACTGTGTGGTTTGAATTTGATCCTATAGTTTGGTTATGCTTGTCGGATATAATCAAACCTAAAAACCAAGTACCGGATGCTACTGCTGCCACTGATCAGGAGATCAGCATTAGCATTGTGACATGTATTCTTGAAATGTTGGGGGTGTCCATAGACAAGGATCTTAGCCTTGCCGAGCTCTTGGAAAGGCTCTACCATGTTTTATTAGGTAAAAGGTACTTGATTGTGCTTGATGATGTATGGGACATTATGAAGTTCTACTCGGATTTATGTTTTAAACTCCCGGAAGGTGAAAAAATTCGGGATCACTTATCACACGGATTGCCTAAGGACTGTGGTGGTACGGTCATTGTCACTAGTAGGATGACGGAAGTAGCGCGAGATATGGTGGGCTTTGGCCAAAATAAGTTGTTCCTTGTTCCGCCATTGGAGAGAGAAGAGTGCTTGTCCAACTTTAACAGCTTTATACACCATGAAAAATACAGGTGCGGTGAAGGAACACGCTTTGGCAAGTCCAACATGGAAACTGTGAAAAAGGTTCATGATGAGATTCTGCATCAAGTTTGTGGTCTGCCATCAATTGCCAAGACTCTGGCAGACTTGATCATTGCAAATCAGATTGGTCAAAATGATTATAATAGGTCTGCCTTGAAGAAGATGTTGATACCTCATGAAATTCTTATTCAATGTTCATGGGTGACTGTTGCGACAAAAGACAAGAAAGCGAAATGGATTCAGGATAAAACCGAAGTACCAAAATGTCCAATATTTGTGTTTATTGATTTAAGAAGTGACCAAGTAGGAGATCTTGCTGAAGACCTTCGCTACCAGCTTAATCGTGAGCAGGTCATTGCTGTTCTGCACGAGAGTTTCTATAATAAGTATAAATTAGCGACAGTGAACCCAGATAGGGCGCTGACTGAGGTTTATGGTGCTCTAGCAACGCTTAAGGGTGTAGGACATAACTTTGCTGATGAAATTCAAAAGAAGATGACAATTATAATTGTTGGTGAGGATGTTTTTATTAACTGGTTTCTGGGAGTTTTCTGTGATCTAAATTTGCCAGACTCACCCTCCATTGTTCCCATAGCACTCGGAATCAAGAGTAACATCCCATTCTCCTTTGGATGGGAGTTTGATGCTATGAAACCAGTGAACAAGATCTTGGAGACGGTTCTAAATCATACAAAACAGATAAAAGCAGACAGCTGGCATATCCTAATCAACTTGAAAGCCATTCCTACAGATCATCAAGAATTACCATATTGTCTGCATTTATGTACTCCTGTTGATGAACCTGCAGATAGGGAAAATGTGGATAATCGACCATTAATCCGTGGAGAATTTTGGAACTACTTCAGCATTGGTGTTGACGATCCAAGACTCTATGGAGCTTCTCGCTTTCGCCATACTTCAAGGACCTTGAACAGGTTACTTGCAAAAGTACAGGTTTTGAAACATCATGGTGATCAGTGGGAAATGCTTAGCATTCCTAGTAGCATTAGGTCAATTGTTTGTCTCAACTTGCCTAGCTTTGTTGGTGGACTAACTCCTTGGACAACGGCAAATTTGAAGAAAGATCACAGAAAAGGCTTGACCTCATCTTTCACAGATGATGGACGTCTTGAAATTATTGGTTCCCGAGATGATTTACTTTCTCCGAAGAAAAGGTGGATTCGCCTTGATCAGGTACGAGAAATTCGCTTCAAGTTTATTGAGGAGTCAGCTGAGGTTGTAAACATGATGATCGATGGAGTACCGTTGAAAAAATCCCCACTTGACGGTTTAGATGAGATTGAAATCTCTTACTGCCGTCAAGTCAGCGTTCTTGTTGAACAAGGTTACTCAGCAAAAAGTATCCACGACTCATAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1087

Amino Acids

122.47

Weight (kDa)

6.24

Isoelectric Point (pI)

38.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 190 - 305 2.2e-10 NB-ARC domain
NB-ARC PF00931 444 - 622 4.4e-15 NB-ARC domain
DAGK_acc PF00609 949 - 1049 2.2e-08 Diacylglycerol kinase accessory domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2028, 2393
AarI CACCTGC 1 cut(s) 1343
AatII GACGTC 1 cut(s) 3016
Acc36I ACCTGC 3 cut(s) 1343, 2227, 2698
AccI GTMKAC 1 cut(s) 1115
AccII CGCG 1 cut(s) 1771
AciI CCGC 4 cut(s) 355, 1078, 1814, 1881
AclWI GGATC 7 cut(s) 764, 972, 1301, 1406, 1560, 1704, 2762
AcoI YGGCCR 2 cut(s) 1329, 1789
AcuI CTGAAG 2 cut(s) 2226, 2734
AcyI GRCGYC 1 cut(s) 3013
AfiI CCNNNNNNNGG 8 cut(s) 1253, 1254, 1465, 2302, 2520, 2820, 3079, 3173
AflII CTTAAG 1 cut(s) 2339
AflIII ACRYGT 1 cut(s) 1514
AhlI ACTAGT 2 cut(s) 743, 1748
AjiI CACGTC 1 cut(s) 664
AjuI GAANNNNNNNTTGG 2 cut(s) 2540, 2572
AleI CACNNNNGTG 1 cut(s) 1373
Alw21I GWGCWC 4 cut(s) 243, 1380, 1572, 2329
Alw26I GTCTC 4 cut(s) 54, 800, 2555, 2915
Alw44I GTGCAC 1 cut(s) 1376
AlwI GGATC 7 cut(s) 764, 972, 1301, 1406, 1560, 1704, 2762
Ama87I CYCGRG 1 cut(s) 3033
AoxI GGCC 2 cut(s) 1329, 1789
ApaLI GTGCAC 1 cut(s) 1376
ApeKI GCWGC 6 cut(s) 5, 161, 164, 167, 396, 1478
AseI ATTAAT 1 cut(s) 2723
Asp700I GAANNNNTTC 4 cut(s) 38, 1689, 2211, 2747
AspLEI GCGC 3 cut(s) 669, 1771, 2308
AspS9I GGNCC 1 cut(s) 2811
AsuC2I CCSGG 1 cut(s) 1676
AsuHPI GGTGA 8 cut(s) 487, 962, 1694, 1895, 2101, 2414, 2454, 2870
AvaI CYCGRG 1 cut(s) 3033
AvaII GGWCC 1 cut(s) 2811
AxyI CCTNAGG 2 cut(s) 987, 1719
BaeGI GKGCMC 1 cut(s) 1380
BaeI ACNNNNGTAYC 2 cut(s) 2127, 2160
BalI TGGCCA 1 cut(s) 1791
BanII GRGCYC 2 cut(s) 243, 1572
BauI CACGAG 1 cut(s) 2255
BbsI GAAGAC 1 cut(s) 2214
Bbv12I GWGCWC 4 cut(s) 243, 1380, 1572, 2329
BbvCI CCTCAGC 1 cut(s) 3120
BbvI GCAGC 5 cut(s) 148, 154, 176, 408, 1465
BccI CCATC 8 cut(s) 169, 409, 1149, 1340, 1975, 2514, 3002, 3137
BceAI ACGGC 4 cut(s) 378, 1344, 2970, 3189
BcgI CGANNNNNNTGC 4 cut(s) 143, 177, 1162, 1196
BciVI GTATCC 2 cut(s) 199, 3260
BclI TGATCA 4 cut(s) 1486, 1995, 2860, 3076
BcnI CCSGG 1 cut(s) 1676
BcoDI GTCTC 4 cut(s) 54, 800, 2555, 2915
BcuI ACTAGT 2 cut(s) 743, 1748
BfaI CTAG 7 cut(s) 744, 1040, 1263, 1749, 2330, 2886, 2922
BfmI CTRYAG 6 cut(s) 162, 168, 1152, 1416, 2634, 2691
BfoI RGCGCY 1 cut(s) 2309
BfrI CTTAAG 1 cut(s) 2339
BfuAI ACCTGC 3 cut(s) 1343, 2227, 2698
BfuI GTATCC 2 cut(s) 199, 3260
BglII AGATCT 3 cut(s) 303, 2197, 2553
BisI GCNGC 8 cut(s) 6, 162, 165, 168, 356, 397, 1079, 1479
BlpI GCTNAGC 1 cut(s) 2876
BlsI GCNGC 8 cut(s) 7, 163, 166, 169, 357, 398, 1080, 1480
BmcAI AGTACT 1 cut(s) 742
Bme1390I CCNGG 1 cut(s) 1676
Bme18I GGWCC 1 cut(s) 2811
BmeT110I CYCGRG 1 cut(s) 3033
BmgBI CACGTC 1 cut(s) 664
BmgT120I GGNCC 1 cut(s) 2811
BmiI GGNNCC 3 cut(s) 82, 1268, 3031
BmrFI CCNGG 1 cut(s) 1676
BmsI GCATC 4 cut(s) 540, 1459, 1957, 2521
BpiI GAAGAC 1 cut(s) 2214
BpmI CTGGAG 2 cut(s) 389, 636
Bpu10I CCTNAGC 2 cut(s) 554, 3120
Bpu1102I GCTNAGC 1 cut(s) 2876
BpuEI CTTGAG 2 cut(s) 64, 806
BpuMI CCSGG 1 cut(s) 1676
Bsa29I ATCGAT 2 cut(s) 1172, 3141
BsaBI GATNNNNATC 1 cut(s) 3191
BsaHI GRCGYC 1 cut(s) 3013
BsaI GGTCTC 1 cut(s) 54
BsaJI CCNNGG 3 cut(s) 9, 2728, 2945
BsaWI WCCGGW 1 cut(s) 1465
BsaXI ACNNNNNCTCC 4 cut(s) 362, 392, 2450, 2480
Bsc4I CCNNNNNNNGG 8 cut(s) 1253, 1254, 1465, 2302, 2520, 2820, 3079, 3173
Bse1I ACTGG 7 cut(s) 28, 372, 586, 855, 1028, 2426, 2543
Bse21I CCTNAGG 2 cut(s) 987, 1719
Bse3DI GCAATG 2 cut(s) 1998, 2241
Bse8I GATNNNNATC 1 cut(s) 3191
BseCI ATCGAT 2 cut(s) 1172, 3141
BseDI CCNNGG 3 cut(s) 9, 2728, 2945
BseGI GGATG 9 cut(s) 180, 336, 520, 898, 1474, 1761, 2413, 2502, 2525
BseJI GATNNNNATC 1 cut(s) 3191
BseLI CCNNNNNNNGG 8 cut(s) 1253, 1254, 1465, 2302, 2520, 2820, 3079, 3173
BseMI GCAATG 2 cut(s) 1998, 2241
BseMII CTCAG 5 cut(s) 417, 450, 2304, 3111, 3252
BseNI ACTGG 7 cut(s) 28, 372, 586, 855, 1028, 2426, 2543
BseRI GAGGAG 3 cut(s) 815, 818, 3125
BseSI GKGCMC 1 cut(s) 1380
BseXI GCAGC 5 cut(s) 148, 154, 176, 408, 1465
BsgI GTGCAG 2 cut(s) 415, 2237
Bsh1236I CGCG 1 cut(s) 1771
BshFI GGCC 2 cut(s) 1331, 1791
BshVI ATCGAT 2 cut(s) 1172, 3141
BsiHKAI GWGCWC 4 cut(s) 243, 1380, 1572, 2329
BsiHKCI CYCGRG 1 cut(s) 3033
BsiSI CCGG 2 cut(s) 1466, 1676
BslFI GGGAC 3 cut(s) 572, 1298, 1649
BslI CCNNNNNNNGG 8 cut(s) 1253, 1254, 1465, 2302, 2520, 2820, 3079, 3173
BsmAI GTCTC 4 cut(s) 54, 800, 2555, 2915
BsmBI CGTCTC 1 cut(s) 2555
BsmFI GGGAC 3 cut(s) 572, 1298, 1649
BsmI GAATGC 3 cut(s) 449, 956, 2880
BsnI GGCC 2 cut(s) 1331, 1791
Bso31I GGTCTC 1 cut(s) 54
BsoBI CYCGRG 1 cut(s) 3033
Bsp1286I GDGCHC 4 cut(s) 243, 1380, 1572, 2329
Bsp1407I TGTACA 1 cut(s) 542
Bsp1720I GCTNAGC 1 cut(s) 2876
BspACI CCGC 4 cut(s) 355, 1078, 1814, 1881
BspANI GGCC 2 cut(s) 1331, 1791
BspCNI CTCAG 5 cut(s) 418, 451, 2305, 3112, 3251
BspDI ATCGAT 2 cut(s) 1172, 3141
BspFNI CGCG 1 cut(s) 1771
BspHI TCATGA 3 cut(s) 420, 1933, 2062
BspLI GGNNCC 3 cut(s) 82, 1268, 3031
BspMAI CTGCAG 3 cut(s) 166, 172, 2695
BspMI ACCTGC 3 cut(s) 1343, 2227, 2698
BspPI GGATC 7 cut(s) 764, 972, 1301, 1406, 1560, 1704, 2762
BspTI CTTAAG 1 cut(s) 2339
BspTNI GGTCTC 1 cut(s) 54
BsrDI GCAATG 2 cut(s) 1998, 2241
BsrGI TGTACA 1 cut(s) 542
BsrI ACTGG 7 cut(s) 28, 372, 586, 855, 1028, 2426, 2543
BssECI CCNNGG 3 cut(s) 9, 2728, 2945
BssNI GRCGYC 1 cut(s) 3013
BssSI CACGAG 1 cut(s) 2255
BssT1I CCWWGG 2 cut(s) 9, 2945
Bst2BI CACGAG 1 cut(s) 2255
Bst6I CTCTTC 1 cut(s) 1824
BstACI GRCGYC 1 cut(s) 3013
BstAFI CTTAAG 1 cut(s) 2339
BstAPI GCANNNNNTGC 2 cut(s) 664, 982
BstAUI TGTACA 1 cut(s) 542
BstC8I GCNNGC 3 cut(s) 983, 1295, 2603
BstDSI CCRYGG 1 cut(s) 2728
BstENI CCTNNNNNAGG 2 cut(s) 2818, 3077
BstF5I GGATG 9 cut(s) 180, 336, 520, 898, 1474, 1761, 2413, 2502, 2525
BstFNI CGCG 1 cut(s) 1771
BstH2I RGCGCY 1 cut(s) 2309
BstHHI GCGC 3 cut(s) 669, 1771, 2308
BstMAI GTCTC 4 cut(s) 54, 800, 2555, 2915
BstMWI GCNNNNNNNGC 6 cut(s) 167, 176, 664, 982, 1078, 1478
BstNSI RCATGY 1 cut(s) 1518
BstSCI CCNGG 1 cut(s) 1674
BstSFI CTRYAG 6 cut(s) 162, 168, 1152, 1416, 2634, 2691
BstSLI GKGCMC 1 cut(s) 1380
BstUI CGCG 1 cut(s) 1771
BstV1I GCAGC 5 cut(s) 148, 154, 176, 408, 1465
BstV2I GAAGAC 1 cut(s) 2214
BstX2I RGATCY 4 cut(s) 303, 1552, 2197, 2553
BstXI CCANNNNNNTGG 1 cut(s) 1984
BstYI RGATCY 4 cut(s) 303, 1552, 2197, 2553
Bsu15I ATCGAT 2 cut(s) 1172, 3141
Bsu36I CCTNAGG 2 cut(s) 987, 1719
BsuI GTATCC 2 cut(s) 199, 3260
BsuRI GGCC 2 cut(s) 1331, 1791
BsuTUI ATCGAT 2 cut(s) 1172, 3141
BtgI CCRYGG 1 cut(s) 2728
BtrI CACGTC 1 cut(s) 664
BtsCI GGATG 9 cut(s) 180, 336, 520, 898, 1474, 1761, 2413, 2502, 2525
BtsIMutI CAGTG 7 cut(s) 35, 365, 456, 1482, 2295, 2550, 2870
BveI ACCTGC 3 cut(s) 1343, 2227, 2698
Cac8I GCNNGC 3 cut(s) 983, 1295, 2603
CciI TCATGA 3 cut(s) 420, 1933, 2062
CfoI GCGC 3 cut(s) 669, 1771, 2308
Cfr13I GGNCC 1 cut(s) 2811
ClaI ATCGAT 2 cut(s) 1172, 3141
CspCI CAANNNNNGTGG 2 cut(s) 1107, 1142
DraI TTTAAA 1 cut(s) 1669
EaeI YGGCCR 2 cut(s) 1329, 1789
Eam1104I CTCTTC 1 cut(s) 1824
EarI CTCTTC 1 cut(s) 1824
EciI GGCGGA 1 cut(s) 1803
Ecl136II GAGCTC 2 cut(s) 241, 1570
Eco130I CCWWGG 2 cut(s) 9, 2945
Eco24I GRGCYC 2 cut(s) 243, 1572
Eco31I GGTCTC 1 cut(s) 54
Eco47I GGWCC 1 cut(s) 2811
Eco53kI GAGCTC 2 cut(s) 241, 1570
Eco57I CTGAAG 2 cut(s) 2226, 2734
Eco81I CCTNAGG 2 cut(s) 987, 1719
Eco88I CYCGRG 1 cut(s) 3033
EcoICRI GAGCTC 2 cut(s) 241, 1570
EcoNI CCTNNNNNAGG 2 cut(s) 2818, 3077
EcoO109I RGGNCCY 1 cut(s) 2811
EcoRI GAATTC 2 cut(s) 23, 487
EcoT14I CCWWGG 2 cut(s) 9, 2945
EcoT38I GRGCYC 2 cut(s) 243, 1572
ErhI CCWWGG 2 cut(s) 9, 2945
Esp3I CGTCTC 1 cut(s) 2555
FalI AAGNNNNNCTT 8 cut(s) 26, 58, 193, 225, 290, 322, 617, 649
FaqI GGGAC 3 cut(s) 572, 1298, 1649
FbaI TGATCA 4 cut(s) 1486, 1995, 2860, 3076
FblI GTMKAC 1 cut(s) 1115
Fnu4HI GCNGC 8 cut(s) 6, 162, 165, 168, 356, 397, 1079, 1479
FokI GGATG 9 cut(s) 187, 323, 527, 905, 1481, 1768, 2420, 2489, 2532
FriOI GRGCYC 2 cut(s) 243, 1572
Fsp4HI GCNGC 8 cut(s) 6, 162, 165, 168, 356, 397, 1079, 1479
FspBI CTAG 7 cut(s) 744, 1040, 1263, 1749, 2330, 2886, 2922
GlaI GCGC 3 cut(s) 668, 1770, 2307
GluI GCNGC 8 cut(s) 6, 162, 165, 168, 356, 397, 1079, 1479
GsuI CTGGAG 2 cut(s) 389, 636
HaeII RGCGCY 1 cut(s) 2309
HaeIII GGCC 2 cut(s) 1331, 1791
HapII CCGG 2 cut(s) 1466, 1676
HhaI GCGC 3 cut(s) 669, 1771, 2308
Hin1I GRCGYC 1 cut(s) 3013
Hin6I GCGC 3 cut(s) 667, 1769, 2306
HinP1I GCGC 3 cut(s) 667, 1769, 2306
HincII GTYRAC 2 cut(s) 1116, 2764
HindII GTYRAC 2 cut(s) 1116, 2764
HpaII CCGG 2 cut(s) 1466, 1676
HphI GGTGA 8 cut(s) 487, 962, 1694, 1895, 2101, 2414, 2454, 2870
HpyAV CCTTC 6 cut(s) 330, 457, 643, 1673, 1880, 2222
HpyCH4IV ACGT 3 cut(s) 407, 663, 3013
HpyF10VI GCNNNNNNNGC 6 cut(s) 167, 176, 664, 982, 1078, 1478
HpySE526I ACGT 3 cut(s) 407, 663, 3013
Hsp92I GRCGYC 1 cut(s) 3013
HspAI GCGC 3 cut(s) 667, 1769, 2306
Ksp22I TGATCA 4 cut(s) 1486, 1995, 2860, 3076
LmnI GCTCC 3 cut(s) 238, 289, 2783
Lsp1109I GCAGC 5 cut(s) 148, 154, 176, 408, 1465
LweI GCATC 4 cut(s) 540, 1459, 1957, 2521
MaeI CTAG 7 cut(s) 744, 1040, 1263, 1749, 2330, 2886, 2922
MaeII ACGT 3 cut(s) 407, 663, 3013
MaeIII GTNAC 8 cut(s) 900, 1510, 1744, 2089, 2183, 2498, 2823, 3233
MfeI CAATTG 2 cut(s) 1971, 2901
MflI RGATCY 4 cut(s) 303, 1552, 2197, 2553
MhlI GDGCHC 4 cut(s) 243, 1380, 1572, 2329
MlsI TGGCCA 1 cut(s) 1791
MluNI TGGCCA 1 cut(s) 1791
MlyI GAGTC 7 cut(s) 822, 1280, 1975, 2453, 2769, 3122, 3251
MmeI TCCRAC 5 cut(s) 805, 870, 1416, 1866, 1932
Mox20I TGGCCA 1 cut(s) 1791
MroXI GAANNNNTTC 4 cut(s) 38, 1689, 2211, 2747
MscI TGGCCA 1 cut(s) 1791
MslI CAYNNNNRTG 3 cut(s) 389, 1373, 2856
Msp20I TGGCCA 1 cut(s) 1791
MspA1I CMGCKG 3 cut(s) 167, 2601, 3119
MspCI CTTAAG 1 cut(s) 2339
MspI CCGG 2 cut(s) 1466, 1676
MspR9I CCNGG 1 cut(s) 1676
MunI CAATTG 2 cut(s) 1971, 2901
Mva1269I GAATGC 3 cut(s) 449, 956, 2880
MvnI CGCG 1 cut(s) 1771
MwoI GCNNNNNNNGC 6 cut(s) 167, 176, 664, 982, 1078, 1478
NciI CCSGG 1 cut(s) 1676
NlaIV GGNNCC 3 cut(s) 82, 1268, 3031
NmeAIII GCCGAG 1 cut(s) 1591
NmuCI GTSAC 4 cut(s) 1510, 1744, 2089, 2183
NspI RCATGY 1 cut(s) 1518
OliI CACNNNNGTG 1 cut(s) 1373
PagI TCATGA 3 cut(s) 420, 1933, 2062
PaqCI CACCTGC 1 cut(s) 1343
PciI ACATGT 1 cut(s) 1514
PctI GAATGC 3 cut(s) 449, 956, 2880
PdmI GAANNNNTTC 4 cut(s) 38, 1689, 2211, 2747
PfeI GAWTC 9 cut(s) 142, 267, 316, 453, 653, 1942, 2125, 2490, 3067
PfoI TCCNGGA 1 cut(s) 1674
PkrI GCNGC 8 cut(s) 7, 163, 166, 169, 357, 398, 1080, 1480
PleI GAGTC 7 cut(s) 822, 1280, 1975, 2453, 2769, 3121, 3251
PpsI GAGTC 7 cut(s) 822, 1280, 1975, 2453, 2769, 3121, 3251
PpuMI RGGWCCY 1 cut(s) 2811
PscI ACATGT 1 cut(s) 1514
PshBI ATTAAT 1 cut(s) 2723
PsiI TTATAA 2 cut(s) 2028, 2393
Psp124BI GAGCTC 2 cut(s) 243, 1572
Psp5II RGGWCCY 1 cut(s) 2811
PspN4I GGNNCC 3 cut(s) 82, 1268, 3031
PspPI GGNCC 1 cut(s) 2811
PspPPI RGGWCCY 1 cut(s) 2811
PstI CTGCAG 3 cut(s) 166, 172, 2695
PsuI RGATCY 4 cut(s) 303, 1552, 2197, 2553
PvuII CAGCTG 3 cut(s) 167, 2601, 3119
RseI CAYNNNNRTG 3 cut(s) 389, 1373, 2856
SacI GAGCTC 2 cut(s) 243, 1572
SalI GTCGAC 1 cut(s) 1114
SatI GCNGC 8 cut(s) 6, 162, 165, 168, 356, 397, 1079, 1479
Sau96I GGNCC 1 cut(s) 2811
ScaI AGTACT 1 cut(s) 742
SchI GAGTC 7 cut(s) 822, 1280, 1975, 2453, 2769, 3122, 3251
ScrFI CCNGG 1 cut(s) 1676
SduI GDGCHC 4 cut(s) 243, 1380, 1572, 2329
SfaNI GCATC 4 cut(s) 540, 1459, 1957, 2521
SfcI CTRYAG 6 cut(s) 162, 168, 1152, 1416, 2634, 2691
SinI GGWCC 1 cut(s) 2811
SmiMI CAYNNNNRTG 3 cut(s) 389, 1373, 2856
SmlI CTYRAG 3 cut(s) 43, 785, 2339
SmoI CTYRAG 3 cut(s) 43, 785, 2339
SpeI ACTAGT 2 cut(s) 743, 1748
SsiI CCGC 4 cut(s) 355, 1078, 1814, 1881
SspI AATATT 1 cut(s) 2160
SspMI CTAG 7 cut(s) 744, 1040, 1263, 1749, 2330, 2886, 2922
SstI GAGCTC 2 cut(s) 243, 1572
StyD4I CCNGG 1 cut(s) 1674
StyI CCWWGG 2 cut(s) 9, 2945
TaiI ACGT 3 cut(s) 410, 666, 3016
TaqI TCGA 6 cut(s) 593, 675, 1115, 1172, 2716, 3141
TatI WGTACW 5 cut(s) 542, 740, 1108, 2672, 2836
TauI GCSGC 2 cut(s) 358, 1081
TfiI GAWTC 9 cut(s) 142, 267, 316, 453, 653, 1942, 2125, 2490, 3067
TscAI CASTG 7 cut(s) 35, 372, 463, 1489, 2295, 2550, 2870
TseFI GTSAC 4 cut(s) 1510, 1744, 2089, 2183
TseI GCWGC 6 cut(s) 5, 161, 164, 167, 396, 1478
Tsp45I GTSAC 4 cut(s) 1510, 1744, 2089, 2183
TspGWI ACGGA 3 cut(s) 1725, 1775, 2717
TspRI CASTG 7 cut(s) 35, 372, 463, 1489, 2295, 2550, 2870
Vha464I CTTAAG 1 cut(s) 2339
VneI GTGCAC 1 cut(s) 1376
VpaK11BI GGWCC 1 cut(s) 2811
VspI ATTAAT 1 cut(s) 2723
XagI CCTNNNNNAGG 2 cut(s) 2818, 3077
XbaI TCTAGA 1 cut(s) 1039
XceI RCATGY 1 cut(s) 1518
XmiI GTMKAC 1 cut(s) 1115
XmnI GAANNNNTTC 4 cut(s) 38, 1689, 2211, 2747
XspI CTAG 7 cut(s) 744, 1040, 1263, 1749, 2330, 2886, 2922
ZraI GACGTC 1 cut(s) 3014
ZrmI AGTACT 1 cut(s) 742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.