Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0010469

Physical Location & Seq

Genomic Coordinates Forward (+)

66025767 .. 66030588

Gene Structure 4822 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0530200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGGGTTCTTCCCAAGACGATACCTACCAACCTCTCCTCCATTCCATTTCATCCTCCCCATCCTTAACAGATAAGCATGACCACTCGAGCAGCACTGAGCTCGAAACAATATTATCCGACACAGATAGGCCGTTCTTGCAGCGTCTCAAACCTGCTCTATGGATCGAGTCGAAGCTCCTTTTCTTCCTCGCCGGTCCGGCAGTGGTCGTCTACATGATCAACTACGTTATGTCCATGTCCACCCAAATCTTCTCCGGCCACCTTGGTAATCTTGAGCTCGCCGCTGCTTCTCTCGGAAACAATGGAATCCAAGTGTTCGCCTATGGCCTCATGTTAGGCATGGGAAGTGCGGTGGAGACGCTATGTGGACAAGCATATGGAGCTCAAAAGTACGAAATGCTAGGCATATATCTACAAAGATCAACCATCCTCCTAACGTTGGTCGGTTTCCTCCTCACCTTGGTCTACATCTTCTCAGAACCAGCTCTAATCATTCTCGGCGAGTCCCCGAGAATCGCCTCCGCCGCCGCCATTTACGTCTACGGCCTGATCCCTCAAATCTTTGCCTACGCCGTCAACTTCCCGATCCAGAAGTTCCTCCAAGCTCAAAGCATAGTGACTCCAAGTGCATACATATCAGCAGTGACACTAGCCGTACACCTCTTGCTGAGCTGGGTGGCCGTGTACAAGATTGGGCTTGGGCTTCTGGGAGCGTCGCTGGTGCTCAGCCTGTCGTGGTGGATTACTGTGGTGGCGCAGTTTGTATACATCCTGAAGAGCGAGAGGTGCAGGCACACGTGGAGCGGTTTTACGTGGCAAGCGTTCACCGGGTTGTATGGATTCTTCAAATTATCGGTGGCGTCTGCAGTGATGCTTTGTTTAGAGACGTGGTATTTTCAGATTCTGGTTCTGCTGGCTGGCTTGCTGGAAAATCCTGAGTTGGCTCTTGACTCGCTCTCGATTTGCACGACTATATCAGGATGGGTGTTCATGATCTCAGTTGGGTTAAATGCAGCTGCAAGTGTGCGAGTAAGCAATGAGCTTGGAGCCGGAAATCCCAAGTCCACAGCATTTTCCGTCATCGTGGTGACTACGATCTCCTTCATCATCTCCGTCATCGCAGCTATAGTTGTTCTTATTTTCCGTGATGTTATCAGCTACGCCTTCACGGAGGGTGAAGTCGTGGCTGCTGCTGTCTCAGATCTCACCCCTCTGCTTGCCCTCACCCTCCTCCTTAATGGAATTCAGCCTGTCTTGTCCGGTGTTGCTGTTGGGTGTGGATGGCAAGCTTTTGTGGCCTATGTAAATGTGGGCTGTTATTACTTGGTTGGAGTACCACTTGGTGCCCTTCTTGGATTTTACTTCAACTTTGGCGCTAAGGGAATATGGTTAGGGATGATGGCGGGCACGTTGATGCAAACAATCATTCTAATATGGGTCACCGTTCGAACGGACTGGAAGAAGGAGGTGGAAGAGGCAGCTAAGAGGTTGAACAAGTGGGACGTGAAGGGGCCCCTAAAAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006950 GO:0007154 GO:0008150 GO:0009266 GO:0009267 GO:0009409 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0012505 GO:0016036 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051716 GO:0070417 GO:0071496

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SPX

Protein Analysis

508

Amino Acids

55.1

Weight (kDa)

6.09

Isoelectric Point (pI)

25.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	66 - 226	1.3e-34	MatE
MatE	PF01554	288 - 449	1.1e-30	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010469)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15330 AT5G15330
fragaria_vesca	FvH4_6g48080
malus_domestica	MD09G1054300.v1.1 MD17G1052000.v1.1 MD17G1052100.v1.1
prunus_persica	Prupe.3G264200_v2.0.a1 Prupe.3G264200_v2.0.a1
pyrus_communis	pycom111g04560 pycom17g04910 pycom17g04920
rosa_chinensis	RchiOBHm_Chr2g0167401
rosa_laevigata	RLG00000021714
rosa_multiflora	Rmu_sc0001840.1_g000004
rosa_roxburghii	Rroxscaffold_2G00083540
rosa_rugosa	Rorug02G0530200
rosa_samantha	Rh2AG597100 Rh2BG608500 Rh2CG579300 Rh2DG619700
rosa_wichuraiana	Rw2G049690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	160
AccB1I	GGYRCC	1 cut(s)	1343
AccBSI	CCGCTC	1 cut(s)	804
AccI	GTMKAC	4 cut(s)	210, 465, 540, 765
AciI	CCGC	7 cut(s)	282, 350, 522, 525, 528, 804, 1403
AclI	AACGTT	1 cut(s)	437
AclWI	GGATC	3 cut(s)	170, 544, 580
AcoI	YGGCCR	2 cut(s)	256, 678
AcsI	RAATTY	1 cut(s)	1242
AcuI	CTGAAG	1 cut(s)	794
AcvI	CACGTG	1 cut(s)	798
AcyI	GRCGYC	1 cut(s)	860
AdeI	CACNNNGTG	1 cut(s)	1343
AfaI	GTAC	4 cut(s)	392, 657, 686, 1335
AfiI	CCNNNNNNNGG	3 cut(s)	439, 460, 1520
AflIII	ACRYGT	1 cut(s)	795
AgsI	TTSAA	3 cut(s)	847, 1366, 1492
AjiI	CACGTC	2 cut(s)	888, 1504
Alw21I	GWGCWC	4 cut(s)	102, 279, 385, 726
Alw26I	GTCTC	4 cut(s)	149, 350, 878, 1201
AlwI	GGATC	3 cut(s)	170, 544, 580
AlwNI	CAGNNNCTG	1 cut(s)	904
Ama87I	CYCGRG	2 cut(s)	85, 508
AoxI	GGCC	7 cut(s)	128, 256, 325, 544, 678, 1296, 1511
ApaI	GGGCCC	1 cut(s)	1515
ApeKI	GCWGC	9 cut(s)	90, 139, 284, 1013, 1016, 1121, 1187, 1190, 1478
ApoI	RAATTY	1 cut(s)	1242
AspLEI	GCGC	2 cut(s)	757, 1376
AspS9I	GGNCC	3 cut(s)	194, 1511, 1512
AsuC2I	CCSGG	1 cut(s)	829
AsuHPI	GGTGA	7 cut(s)	448, 817, 1099, 1187, 1198, 1216, 1432
AsuII	TTCGAA	1 cut(s)	1447
AvaI	CYCGRG	2 cut(s)	85, 508
AvaII	GGWCC	1 cut(s)	194
BaeGI	GKGCMC	3 cut(s)	1348, 1409, 1515
BanI	GGYRCC	1 cut(s)	1343
BanII	GRGCYC	4 cut(s)	102, 279, 385, 1515
BarI	GAAGNNNNNNTAC	2 cut(s)	827, 859
BbrPI	CACGTG	1 cut(s)	798
Bbv12I	GWGCWC	4 cut(s)	102, 279, 385, 726
BbvI	GCAGC	9 cut(s)	102, 151, 271, 1003, 1025, 1133, 1174, 1177, 1490
BccI	CCATC	5 cut(s)	67, 434, 975, 1275, 1393
BceAI	ACGGC	5 cut(s)	115, 557, 559, 638, 665
BcgI	CGANNNNNNTGC	2 cut(s)	82, 116
BclI	TGATCA	1 cut(s)	216
BcnI	CCSGG	1 cut(s)	829
BcoDI	GTCTC	4 cut(s)	149, 350, 878, 1201
BfaI	CTAG	2 cut(s)	401, 650
BfmI	CTRYAG	2 cut(s)	864, 1125
BfoI	RGCGCY	1 cut(s)	1377
BfuAI	ACCTGC	1 cut(s)	160
BglI	GCCNNNNNGGC	1 cut(s)	197
BglII	AGATCT	1 cut(s)	1201
BlpI	GCTNAGC	2 cut(s)	668, 725
Bme1390I	CCNGG	1 cut(s)	829
Bme18I	GGWCC	1 cut(s)	194
BmeT110I	CYCGRG	2 cut(s)	85, 508
BmgBI	CACGTC	2 cut(s)	888, 1504
BmgT120I	GGNCC	3 cut(s)	194, 1511, 1512
BmiI	GGNNCC	5 cut(s)	1048, 1345, 1512, 1513, 1514
BmrFI	CCNGG	1 cut(s)	829
BmsI	GCATC	2 cut(s)	861, 1404
Bpu10I	CCTNAGC	1 cut(s)	1377
Bpu1102I	GCTNAGC	2 cut(s)	668, 725
Bpu14I	TTCGAA	1 cut(s)	1447
BpuEI	CTTGAG	1 cut(s)	293
BpuMI	CCSGG	1 cut(s)	829
BsaAI	YACGTR	2 cut(s)	798, 813
BsaHI	GRCGYC	1 cut(s)	860
BsaJI	CCNNGG	2 cut(s)	262, 459
BsaWI	WCCGGW	1 cut(s)	1259
BsaXI	ACNNNNNCTCC	2 cut(s)	21, 51
Bsc4I	CCNNNNNNNGG	3 cut(s)	439, 460, 1520
Bse118I	RCCGGY	1 cut(s)	191
Bse1I	ACTGG	1 cut(s)	1460
Bse3DI	GCAATG	1 cut(s)	1042
BseDI	CCNNGG	2 cut(s)	262, 459
BseGI	GGATG	7 cut(s)	50, 59, 426, 768, 986, 1286, 1401
BseLI	CCNNNNNNNGG	3 cut(s)	439, 460, 1520
BseMI	GCAATG	1 cut(s)	1042
BseMII	CTCAG	7 cut(s)	87, 489, 659, 739, 927, 1011, 1212
BseNI	ACTGG	1 cut(s)	1460
BseRI	GAGGAG	3 cut(s)	26, 443, 1220
BseSI	GKGCMC	3 cut(s)	1348, 1409, 1515
BseXI	GCAGC	9 cut(s)	102, 151, 271, 1003, 1025, 1133, 1174, 1177, 1490
BseYI	CCCAGC	1 cut(s)	672
BsgI	GTGCAG	1 cut(s)	808
BshFI	GGCC	7 cut(s)	130, 258, 327, 546, 680, 1298, 1513
BshNI	GGYRCC	1 cut(s)	1343
BsiHKAI	GWGCWC	4 cut(s)	102, 279, 385, 726
BsiHKCI	CYCGRG	2 cut(s)	85, 508
BsiSI	CCGG	6 cut(s)	192, 197, 255, 828, 1050, 1260
BslFI	GGGAC	2 cut(s)	490, 1514
BslI	CCNNNNNNNGG	3 cut(s)	439, 460, 1520
BsmAI	GTCTC	4 cut(s)	149, 350, 878, 1201
BsmBI	CGTCTC	3 cut(s)	149, 350, 878
BsmFI	GGGAC	2 cut(s)	490, 1514
BsnI	GGCC	7 cut(s)	130, 258, 327, 546, 680, 1298, 1513
BsoBI	CYCGRG	2 cut(s)	85, 508
Bsp119I	TTCGAA	1 cut(s)	1447
Bsp120I	GGGCCC	1 cut(s)	1511
Bsp1286I	GDGCHC	7 cut(s)	102, 279, 385, 726, 1348, 1409, 1515
Bsp1407I	TGTACA	1 cut(s)	684
Bsp143I	GATC	8 cut(s)	162, 216, 419, 549, 585, 993, 1095, 1201
Bsp1720I	GCTNAGC	2 cut(s)	668, 725
BspACI	CCGC	7 cut(s)	282, 350, 522, 525, 528, 804, 1403
BspANI	GGCC	7 cut(s)	130, 258, 327, 546, 680, 1298, 1513
BspCNI	CTCAG	7 cut(s)	88, 488, 660, 738, 928, 1010, 1211
BspHI	TCATGA	1 cut(s)	990
BspLI	GGNNCC	5 cut(s)	1048, 1345, 1512, 1513, 1514
BspMAI	CTGCAG	1 cut(s)	868
BspMI	ACCTGC	1 cut(s)	160
BspPI	GGATC	3 cut(s)	170, 544, 580
BspQI	GCTCTTC	1 cut(s)	770
BspT104I	TTCGAA	1 cut(s)	1447
BspT107I	GGYRCC	1 cut(s)	1343
BsrBI	CCGCTC	1 cut(s)	804
BsrDI	GCAATG	1 cut(s)	1042
BsrFI	RCCGGY	1 cut(s)	191
BsrGI	TGTACA	1 cut(s)	684
BsrI	ACTGG	1 cut(s)	1460
BssAI	RCCGGY	1 cut(s)	191
BssECI	CCNNGG	2 cut(s)	262, 459
BssMI	GATC	8 cut(s)	162, 216, 419, 549, 585, 993, 1095, 1201
BssNAI	GTATAC	1 cut(s)	766
BssNI	GRCGYC	1 cut(s)	860
BssT1I	CCWWGG	2 cut(s)	262, 459
Bst1107I	GTATAC	1 cut(s)	766
Bst4CI	ACNGT	2 cut(s)	748, 1444
Bst6I	CTCTTC	2 cut(s)	770, 1467
BstACI	GRCGYC	1 cut(s)	860
BstAUI	TGTACA	1 cut(s)	684
BstBAI	YACGTR	2 cut(s)	798, 813
BstBI	TTCGAA	1 cut(s)	1447
BstC8I	GCNNGC	9 cut(s)	279, 791, 819, 915, 919, 923, 1218, 1287, 1405
BstDEI	CTNAG	9 cut(s)	96, 475, 668, 725, 936, 997, 1198, 1377, 1482
BstEII	GGTNACC	1 cut(s)	1438
BstF5I	GGATG	7 cut(s)	50, 59, 426, 768, 986, 1286, 1401
BstH2I	RGCGCY	1 cut(s)	1377
BstHHI	GCGC	2 cut(s)	757, 1376
BstKTI	GATC	8 cut(s)	165, 219, 422, 552, 588, 996, 1098, 1204
BstMAI	GTCTC	4 cut(s)	149, 350, 878, 1201
BstMBI	GATC	8 cut(s)	162, 216, 419, 549, 585, 993, 1095, 1201
BstMWI	GCNNNNNNNGC	6 cut(s)	136, 197, 380, 524, 786, 1295
BstPI	GGTNACC	1 cut(s)	1438
BstSCI	CCNGG	1 cut(s)	827
BstSFI	CTRYAG	2 cut(s)	864, 1125
BstSLI	GKGCMC	3 cut(s)	1348, 1409, 1515
BstV1I	GCAGC	9 cut(s)	102, 151, 271, 1003, 1025, 1133, 1174, 1177, 1490
BstX2I	RGATCY	1 cut(s)	1201
BstYI	RGATCY	1 cut(s)	1201
BstZ17I	GTATAC	1 cut(s)	766
BsuRI	GGCC	7 cut(s)	130, 258, 327, 546, 680, 1298, 1513
BtgZI	GCGATG	1 cut(s)	1102
BtrI	CACGTC	2 cut(s)	888, 1504
BtsCI	GGATG	7 cut(s)	50, 59, 426, 768, 986, 1286, 1401
BtsI	GCAGTG	3 cut(s)	207, 648, 873
BtsIMutI	CAGTG	4 cut(s)	93, 207, 648, 873
BveI	ACCTGC	1 cut(s)	160
Cac8I	GCNNGC	9 cut(s)	279, 791, 819, 915, 919, 923, 1218, 1287, 1405
CaiI	CAGNNNCTG	1 cut(s)	904
CciI	TCATGA	1 cut(s)	990
CfoI	GCGC	2 cut(s)	757, 1376
Cfr10I	RCCGGY	1 cut(s)	191
Cfr13I	GGNCC	3 cut(s)	194, 1511, 1512
CpoI	CGGWCCG	1 cut(s)	194
CseI	GACGC	4 cut(s)	131, 367, 702, 849
Csp6I	GTAC	4 cut(s)	391, 656, 685, 1334
CspI	CGGWCCG	1 cut(s)	194
CviAII	CATG	6 cut(s)	77, 214, 235, 331, 340, 991
CviQI	GTAC	4 cut(s)	391, 656, 685, 1334
DdeI	CTNAG	9 cut(s)	96, 475, 668, 725, 936, 997, 1198, 1377, 1482
DpnI	GATC	8 cut(s)	164, 218, 421, 551, 587, 995, 1097, 1203
DpnII	GATC	8 cut(s)	162, 216, 419, 549, 585, 993, 1095, 1201
DraIII	CACNNNGTG	1 cut(s)	1343
EaeI	YGGCCR	2 cut(s)	256, 678
Eam1104I	CTCTTC	2 cut(s)	770, 1467
EarI	CTCTTC	2 cut(s)	770, 1467
EciI	GGCGGA	1 cut(s)	511
Ecl136II	GAGCTC	3 cut(s)	100, 277, 383
Eco130I	CCWWGG	2 cut(s)	262, 459
Eco24I	GRGCYC	4 cut(s)	102, 279, 385, 1515
Eco47I	GGWCC	1 cut(s)	194
Eco53kI	GAGCTC	3 cut(s)	100, 277, 383
Eco57I	CTGAAG	1 cut(s)	794
Eco72I	CACGTG	1 cut(s)	798
Eco88I	CYCGRG	2 cut(s)	85, 508
Eco91I	GGTNACC	1 cut(s)	1438
EcoICRI	GAGCTC	3 cut(s)	100, 277, 383
EcoO109I	RGGNCCY	2 cut(s)	1511, 1512
EcoO65I	GGTNACC	1 cut(s)	1438
EcoRI	GAATTC	1 cut(s)	1242
EcoT14I	CCWWGG	2 cut(s)	262, 459
EcoT38I	GRGCYC	4 cut(s)	102, 279, 385, 1515
ErhI	CCWWGG	2 cut(s)	262, 459
Esp3I	CGTCTC	3 cut(s)	149, 350, 878
FaeI	CATG	6 cut(s)	80, 217, 238, 334, 343, 994
FaqI	GGGAC	2 cut(s)	490, 1514
FatI	CATG	6 cut(s)	76, 213, 234, 330, 339, 990
FauI	CCCGC	1 cut(s)	1396
FauNDI	CATATG	1 cut(s)	376
FbaI	TGATCA	1 cut(s)	216
FblI	GTMKAC	4 cut(s)	210, 465, 540, 765
FokI	GGATG	7 cut(s)	37, 46, 413, 755, 993, 1293, 1408
FriOI	GRGCYC	4 cut(s)	102, 279, 385, 1515
FspBI	CTAG	2 cut(s)	401, 650
GlaI	GCGC	2 cut(s)	756, 1375
GsaI	CCCAGC	1 cut(s)	676
HaeII	RGCGCY	1 cut(s)	1377
HaeIII	GGCC	7 cut(s)	130, 258, 327, 546, 680, 1298, 1513
HapII	CCGG	6 cut(s)	192, 197, 255, 828, 1050, 1260
HgaI	GACGC	4 cut(s)	131, 367, 702, 849
HhaI	GCGC	2 cut(s)	757, 1376
Hin1I	GRCGYC	1 cut(s)	860
Hin1II	CATG	6 cut(s)	80, 217, 238, 334, 343, 994
Hin6I	GCGC	2 cut(s)	755, 1374
HinP1I	GCGC	2 cut(s)	755, 1374
HincII	GTYRAC	1 cut(s)	577
HindII	GTYRAC	1 cut(s)	577
HindIII	AAGCTT	1 cut(s)	1287
HinfI	GANTC	8 cut(s)	167, 306, 503, 513, 619, 840, 901, 950
HpaII	CCGG	6 cut(s)	192, 197, 255, 828, 1050, 1260
HphI	GGTGA	7 cut(s)	448, 817, 1099, 1187, 1198, 1216, 1432
Hpy188I	TCNGA	5 cut(s)	118, 296, 478, 900, 1201
Hpy188III	TCNNGA	9 cut(s)	272, 583, 589, 772, 935, 947, 958, 978, 991
Hpy99I	CGWCG	1 cut(s)	718
HpyAV	CCTTC	5 cut(s)	1111, 1174, 1358, 1456, 1501
HpyCH4III	ACNGT	2 cut(s)	748, 1444
HpyCH4IV	ACGT	8 cut(s)	225, 437, 537, 797, 812, 887, 1409, 1503
HpyCH4V	TGCA	8 cut(s)	139, 629, 789, 866, 966, 1013, 1019, 1417
HpyF10VI	GCNNNNNNNGC	6 cut(s)	136, 197, 380, 524, 786, 1295
HpyF3I	CTNAG	9 cut(s)	96, 475, 668, 725, 936, 997, 1198, 1377, 1482
HpySE526I	ACGT	8 cut(s)	225, 437, 537, 797, 812, 887, 1409, 1503
Hsp92I	GRCGYC	1 cut(s)	860
Hsp92II	CATG	6 cut(s)	80, 217, 238, 334, 343, 994
HspAI	GCGC	2 cut(s)	755, 1374
Ksp22I	TGATCA	1 cut(s)	216
Kzo9I	GATC	8 cut(s)	162, 216, 419, 549, 585, 993, 1095, 1201
LguI	GCTCTTC	1 cut(s)	770
LmnI	GCTCC	5 cut(s)	180, 380, 710, 801, 1046
Lsp1109I	GCAGC	9 cut(s)	102, 151, 271, 1003, 1025, 1133, 1174, 1177, 1490
LweI	GCATC	2 cut(s)	861, 1404
MaeI	CTAG	2 cut(s)	401, 650
MaeII	ACGT	8 cut(s)	225, 437, 537, 797, 812, 887, 1409, 1503
MaeIII	GTNAC	4 cut(s)	616, 643, 1087, 1438
MalI	GATC	8 cut(s)	164, 218, 421, 551, 587, 995, 1097, 1203
MbiI	CCGCTC	1 cut(s)	804
MboI	GATC	8 cut(s)	162, 216, 419, 549, 585, 993, 1095, 1201
MboII	GAAGA	7 cut(s)	175, 241, 463, 787, 835, 1471, 1484
MflI	RGATCY	1 cut(s)	1201
MhlI	GDGCHC	7 cut(s)	102, 279, 385, 726, 1348, 1409, 1515
MluCI	AATT	2 cut(s)	848, 1242
MlyI	GAGTC	4 cut(s)	176, 512, 613, 944
MmeI	TCCRAC	2 cut(s)	141, 1309
MseI	TTAA	3 cut(s)	65, 1007, 1236
MslI	CAYNNNNRTG	2 cut(s)	1085, 1412
MspA1I	CMGCKG	2 cut(s)	284, 1016
MspI	CCGG	6 cut(s)	192, 197, 255, 828, 1050, 1260
MspR9I	CCNGG	1 cut(s)	829
MwoI	GCNNNNNNNGC	6 cut(s)	136, 197, 380, 524, 786, 1295
NciI	CCSGG	1 cut(s)	829
NdeI	CATATG	1 cut(s)	376
NdeII	GATC	8 cut(s)	162, 216, 419, 549, 585, 993, 1095, 1201
NlaIII	CATG	6 cut(s)	80, 217, 238, 334, 343, 994
NlaIV	GGNNCC	5 cut(s)	1048, 1345, 1512, 1513, 1514
NmeAIII	GCCGAG	1 cut(s)	477
NmuCI	GTSAC	4 cut(s)	616, 643, 1087, 1438
NspV	TTCGAA	1 cut(s)	1447
PaeR7I	CTCGAG	1 cut(s)	85
PagI	TCATGA	1 cut(s)	990
PciSI	GCTCTTC	1 cut(s)	770
PcsI	WCGNNNNNNNCGW	2 cut(s)	818, 965
PfeI	GAWTC	4 cut(s)	306, 513, 840, 901
PleI	GAGTC	4 cut(s)	175, 511, 613, 944
PmaCI	CACGTG	1 cut(s)	798
PmlI	CACGTG	1 cut(s)	798
PpsI	GAGTC	4 cut(s)	175, 511, 613, 944
Ppu21I	YACGTR	2 cut(s)	798, 813
Psp124BI	GAGCTC	3 cut(s)	102, 279, 385
Psp1406I	AACGTT	1 cut(s)	437
PspCI	CACGTG	1 cut(s)	798
PspEI	GGTNACC	1 cut(s)	1438
PspFI	CCCAGC	1 cut(s)	672
PspN4I	GGNNCC	5 cut(s)	1048, 1345, 1512, 1513, 1514
PspOMI	GGGCCC	1 cut(s)	1511
PspPI	GGNCC	3 cut(s)	194, 1511, 1512
PspXI	VCTCGAGB	1 cut(s)	85
PstI	CTGCAG	1 cut(s)	868
PstNI	CAGNNNCTG	1 cut(s)	904
PsuI	RGATCY	1 cut(s)	1201
PvuII	CAGCTG	1 cut(s)	1016
RsaI	GTAC	4 cut(s)	392, 657, 686, 1335
RsaNI	GTAC	4 cut(s)	391, 656, 685, 1334
RseI	CAYNNNNRTG	2 cut(s)	1085, 1412
Rsr2I	CGGWCCG	1 cut(s)	194
RsrII	CGGWCCG	1 cut(s)	194
SacI	GAGCTC	3 cut(s)	102, 279, 385
SapI	GCTCTTC	1 cut(s)	770
SaqAI	TTAA	3 cut(s)	65, 1007, 1236
Sau3AI	GATC	8 cut(s)	162, 216, 419, 549, 585, 993, 1095, 1201
Sau96I	GGNCC	3 cut(s)	194, 1511, 1512
SchI	GAGTC	4 cut(s)	176, 512, 613, 944
ScrFI	CCNGG	1 cut(s)	829
SduI	GDGCHC	7 cut(s)	102, 279, 385, 726, 1348, 1409, 1515
SfaNI	GCATC	2 cut(s)	861, 1404
SfcI	CTRYAG	2 cut(s)	864, 1125
Sfr274I	CTCGAG	1 cut(s)	85
SfuI	TTCGAA	1 cut(s)	1447
SinI	GGWCC	1 cut(s)	194
SlaI	CTCGAG	1 cut(s)	85
SmiMI	CAYNNNNRTG	2 cut(s)	1085, 1412
SmlI	CTYRAG	2 cut(s)	85, 272
SmoI	CTYRAG	2 cut(s)	85, 272
Sse9I	AATT	2 cut(s)	848, 1242
SsiI	CCGC	7 cut(s)	282, 350, 522, 525, 528, 804, 1403
SspI	AATATT	1 cut(s)	111
SspMI	CTAG	2 cut(s)	401, 650
SstI	GAGCTC	3 cut(s)	102, 279, 385
StyD4I	CCNGG	1 cut(s)	827
StyI	CCWWGG	2 cut(s)	262, 459
TaaI	ACNGT	2 cut(s)	748, 1444
TaiI	ACGT	8 cut(s)	228, 440, 540, 800, 815, 890, 1412, 1506
TaqI	TCGA	6 cut(s)	86, 102, 165, 170, 959, 1447
TasI	AATT	2 cut(s)	848, 1242
TatI	WGTACW	1 cut(s)	684
TauI	GCSGC	3 cut(s)	284, 527, 530
TfiI	GAWTC	4 cut(s)	306, 513, 840, 901
Tru1I	TTAA	3 cut(s)	65, 1007, 1236
Tru9I	TTAA	3 cut(s)	65, 1007, 1236
TscAI	CASTG	4 cut(s)	100, 207, 648, 873
TseFI	GTSAC	4 cut(s)	616, 643, 1087, 1438
TseI	GCWGC	9 cut(s)	90, 139, 284, 1013, 1016, 1121, 1187, 1190, 1478
Tsp45I	GTSAC	4 cut(s)	616, 643, 1087, 1438
TspDTI	ATGAA	3 cut(s)	39, 979, 1093
TspGWI	ACGGA	5 cut(s)	1066, 1102, 1133, 1184, 1466
TspRI	CASTG	4 cut(s)	100, 207, 648, 873
VpaK11BI	GGWCC	1 cut(s)	194
XapI	RAATTY	1 cut(s)	1242
XhoI	CTCGAG	1 cut(s)	85
XmiI	GTMKAC	4 cut(s)	210, 465, 540, 765
XspI	CTAG	2 cut(s)	401, 650

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.