Rorug02G0585800

Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex functions in docking export-competent ribonucleoprotein particles (mRNPs) to the nuclear entrance of the nuclear pore complex (nuclear basket). TREX-2 participates in mRNA export and accurate chromatin positioning in the nucleus by tethering genes to the nuclear periphery

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0015292
Physical Location & Seq
Forward (+)
70883863 .. 70885491
1629 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0585800.1

Sequence Viewer

Length: 1629 bp
ATGATCAGAAAGAGACCAAACGACAGGAGCACCAACCGTCAACAGCGGTCAACCCTCTTTCAAAAATGCACCAACCTCCGAGCTCTCAAGCAAGTCCATGCTTCCATGGTCGTCCATGGCTTCAATTCGAACCATTCCGCTGTCGGAGAGCTCATTTTCGCCAGCGCTATGGTGATTTCGGGCACCATTGGCTATGCCCACAAGTTGTTCGATCATATTACTGAACCAAACACCTTCATGTGGAACACTATGATCAGAGGTTCAGCTCAGAGCCTGAAACCACTCAATGCGGTGGTGTTATATACCCAGATGGAGAAGCGGGGTTTGAGGCCTGATGACTTCACTTTCCCATTTATTCTCAAGGCCTGCACTAAGCTTTGTTGGGTTAAGATGGGAATGGGGATTCATGGCAAGGTTGTGAGGTTTGGGTTTCAGTCAAATGCCTCTGTGAGGAATACCCTTATTGATTTTCATGCTAAATGTGGGGATTTGAGGGTTGCCACCGCACTTTTTGATGGCTCGGCCAAGAGGGATGTCGTGGCTTGGTCAGCATTGACAGCAGGGTATGCAAGAAGAGGGAAGCTGGATGCCGCGAGGCGGCTTTTCAATGAAATGCCTGTTAAGGATTTGGTTTCTTGGAATGTGATGATTACGGGGTACACAAAGCAAGGGGAGATGGAGAGTGCGAGGAGGTTGTTTGATGAGGTTCCGAGAAGAGATGTGGTGACTTGGAATGCAATGATCGCGGGCTATGTGCGCTGCGGGTTTATTGAGCAGGCATTGCAGATGTTTGAGGAGATGACAAGTCTGGGTGAGAAGCCTGATGAGGTGACAATGTTGAGTCTGTTGTCTGCTTGCGCAGATATTGGAGAGTTAGAAATTGGGGAAAGGATACATTCCTCTCTTCTAGAGATGGGTTCTGGGGAGATAAGCATCATACATGGAAATGCGCTTATAGATATGTATTCCAAGTGTGGCAGCATTGAAAGGGCACTTGAAGTGTTTCGGGGGATGAGGGAGAAGGATGTGTCTTCATGGAATTCAGTGATCGGAGGGCTGGCATTCCATGGCCATGCTGAAGAGTCGGTTAATCTGTTTGAAGAGATGCGGAGGTTGAAAGTCAGGCCTGATGGGATCACATTTGTTGGAGTCTTGGTAGCTTGCAGTCATGCTGGGAAGGTTGAAGAGGGGCGTGGATATCTTAGTCTCATGAGGAATGAGTACAAAATCGAGCCGAACATAAAGCATTATGGGTGTATGGTGGATCTCTTAGGGCGTGCTGGGCTACTAGATGAAGCATTTGACTGCATTGAAAACATGGAGATGCAACCCAATGCCATAGTTTGGAGGACTCTTCTTGGGGCTTGTAAGGTTCATGGAAATGTTGAGTTGGGCAGACGTGCAAACGAGCGGCTACTTGAAATTAGAGGAGATGAGAGTGGGGATTTTGTACTACTATCAAACATATATGCTTCAAGAGGCGAGTGGCATGGGGCTGAGGAGGTGAGAAAGCTAATGGACGACACTGGGGTGAAGAAAGAGCCTGGCTTTAGCATAGTTGAAGCAGATGATAGTGCTCTCAAGCATTTTTGTTTCTATTCGAAATCTAAGTCAAACAGAGGATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EnY2

Protein Analysis

542

Amino Acids

60.71

Weight (kDa)

8.15

Isoelectric Point (pI)

41.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 76 - 125 7.9e-10 PPR repeat family
PPR_2 PF13041 209 - 238 2.7e-06 PPR repeat family
PPR PF01535 211 - 240 1e-06 PPR repeat
PPR_2 PF13041 239 - 287 7.7e-14 PPR repeat family
PPR_1 PF12854 240 - 268 1.3e-06 PPR repeat
PPR PF01535 242 - 271 6.1e-09 PPR repeat
PPR_2 PF13041 341 - 388 1.3e-08 PPR repeat family
PPR PF01535 345 - 373 1e-05 PPR repeat
E_motif PF20431 459 - 521 3e-19 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G27100 AT3G27100
fragaria_vesca FvH4_6g53480 FvH4_6g53480
malus_domestica MD00G1139400.v1.1 MD09G1011100.v1.1
prunus_persica Prupe.3G305900_v2.0.a1 Prupe.3G305900_v2.0.a1
pyrus_communis pycom111g00940
rosa_chinensis RchiOBHm_Chr2g0175521
rosa_laevigata RLG00000022335
rosa_multiflora Rmu_sc0021955.1_g000007
rosa_roxburghii Rroxscaffold_2G00077240
rosa_rugosa Rorug02G0585800
rosa_samantha Rh2CG639000
rosa_wichuraiana Rw2G054510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 859
AccB1I GGYRCC 1 cut(s) 182
AccB7I CCANNNNNTGG 1 cut(s) 1344
AccBSI CCGCTC 1 cut(s) 1411
AccII CGCG 2 cut(s) 593, 746
AclWI GGATC 2 cut(s) 1142, 1272
AcoI YGGCCR 2 cut(s) 522, 1069
AcsI RAATTY 1 cut(s) 1039
AcuI CTGAAG 1 cut(s) 1098
AfaI GTAC 3 cut(s) 659, 1223, 1452
AfeI AGCGCT 1 cut(s) 166
AfiI CCNNNNNNNGG 4 cut(s) 240, 450, 597, 1344
AjiI CACGTC 1 cut(s) 1400
AjnI CCWGG 1 cut(s) 1543
AleI CACNNNNGTG 1 cut(s) 1529
AluBI AGCT 7 cut(s) 83, 151, 266, 376, 583, 1160, 1513
AluI AGCT 7 cut(s) 83, 151, 266, 376, 583, 1160, 1513
Alw21I GWGCWC 4 cut(s) 32, 85, 153, 1579
Alw26I GTCTC 2 cut(s) 7, 1211
AlwI GGATC 2 cut(s) 1142, 1272
AlwNI CAGNNNCTG 1 cut(s) 274
Aor51HI AGCGCT 1 cut(s) 166
AoxI GGCC 5 cut(s) 329, 363, 522, 1069, 1124
ApeKI GCWGC 2 cut(s) 759, 978
ApoI RAATTY 1 cut(s) 1039
ArsI GACNNNNNNTTYG 2 cut(s) 1595, 1627
Asp700I GAANNNNTTC 1 cut(s) 1002
AspLEI GCGC 4 cut(s) 167, 759, 860, 952
AsuHPI GGTGA 6 cut(s) 184, 736, 824, 841, 1516, 1543
AsuII TTCGAA 2 cut(s) 128, 1601
BaeGI GKGCMC 2 cut(s) 185, 994
BalI TGGCCA 1 cut(s) 1071
BanI GGYRCC 1 cut(s) 182
BanII GRGCYC 2 cut(s) 85, 153
BbsI GAAGAC 1 cut(s) 1023
Bbv12I GWGCWC 4 cut(s) 32, 85, 153, 1579
BbvCI CCTCAGC 1 cut(s) 1497
BbvI GCAGC 2 cut(s) 746, 990
BccI CCATC 6 cut(s) 304, 385, 509, 670, 907, 1124
BciT130I CCWGG 1 cut(s) 1545
BciVI GTATCC 1 cut(s) 885
BclI TGATCA 2 cut(s) 3, 252
BcoDI GTCTC 2 cut(s) 7, 1211
BfaI CTAG 2 cut(s) 908, 1289
BfoI RGCGCY 1 cut(s) 168
BfuI GTATCC 1 cut(s) 885
BisI GCNGC 5 cut(s) 591, 599, 760, 979, 1412
BlsI GCNGC 5 cut(s) 592, 600, 761, 980, 1413
Bme1390I CCNGG 1 cut(s) 1545
BmgBI CACGTC 1 cut(s) 1400
BmiI GGNNCC 2 cut(s) 184, 708
BmrFI CCNGG 1 cut(s) 1545
BmrI ACTGGG 1 cut(s) 1536
BmsI GCATC 4 cut(s) 577, 942, 1095, 1314
BmuI ACTGGG 1 cut(s) 1536
BpiI GAAGAC 1 cut(s) 1023
Bpu10I CCTNAGC 1 cut(s) 1497
Bpu14I TTCGAA 2 cut(s) 128, 1601
BpuEI CTTGAG 3 cut(s) 71, 344, 1565
BsaBI GATNNNNATC 1 cut(s) 932
BsaI GGTCTC 1 cut(s) 7
BsaJI CCNNGG 3 cut(s) 105, 115, 1066
BsaXI ACNNNNNCTCC 2 cut(s) 1140, 1170
Bsc4I CCNNNNNNNGG 4 cut(s) 240, 450, 597, 1344
Bse1I ACTGG 1 cut(s) 1531
Bse3DI GCAATG 2 cut(s) 744, 779
Bse8I GATNNNNATC 1 cut(s) 932
BseBI CCWGG 1 cut(s) 1545
BseDI CCNNGG 3 cut(s) 105, 115, 1066
BseGI GGATG 5 cut(s) 538, 592, 1017, 1030, 1628
BseJI GATNNNNATC 1 cut(s) 932
BseLI CCNNNNNNNGG 4 cut(s) 240, 450, 597, 1344
BseMI GCAATG 2 cut(s) 744, 779
BseMII CTCAG 2 cut(s) 281, 1488
BseNI ACTGG 1 cut(s) 1531
BseRI GAGGAG 4 cut(s) 703, 809, 1443, 1514
BseSI GKGCMC 2 cut(s) 185, 994
BseXI GCAGC 2 cut(s) 746, 990
BseYI CCCAGC 2 cut(s) 1172, 1280
BsgI GTGCAG 1 cut(s) 352
Bsh1236I CGCG 2 cut(s) 593, 746
BshFI GGCC 5 cut(s) 331, 365, 524, 1071, 1126
BshNI GGYRCC 1 cut(s) 182
BsiHKAI GWGCWC 4 cut(s) 32, 85, 153, 1579
BslI CCNNNNNNNGG 4 cut(s) 240, 450, 597, 1344
BsmAI GTCTC 2 cut(s) 7, 1211
BsmI GAATGC 2 cut(s) 739, 1061
BsnI GGCC 5 cut(s) 331, 365, 524, 1071, 1126
Bso31I GGTCTC 1 cut(s) 7
Bsp119I TTCGAA 2 cut(s) 128, 1601
Bsp1286I GDGCHC 6 cut(s) 32, 85, 153, 185, 994, 1579
Bsp143I GATC 7 cut(s) 3, 211, 252, 741, 1047, 1134, 1264
Bsp19I CCATGG 3 cut(s) 105, 115, 1066
BspANI GGCC 5 cut(s) 331, 365, 524, 1071, 1126
BspCNI CTCAG 2 cut(s) 280, 1489
BspFNI CGCG 2 cut(s) 593, 746
BspHI TCATGA 1 cut(s) 1209
BspLI GGNNCC 2 cut(s) 184, 708
BspPI GGATC 2 cut(s) 1142, 1272
BspT104I TTCGAA 2 cut(s) 128, 1601
BspT107I GGYRCC 1 cut(s) 182
BspTNI GGTCTC 1 cut(s) 7
BsrBI CCGCTC 1 cut(s) 1411
BsrDI GCAATG 2 cut(s) 744, 779
BsrI ACTGG 1 cut(s) 1531
BssECI CCNNGG 3 cut(s) 105, 115, 1066
BssMI GATC 7 cut(s) 3, 211, 252, 741, 1047, 1134, 1264
BssT1I CCWWGG 3 cut(s) 105, 115, 1066
Bst2UI CCWGG 1 cut(s) 1545
Bst4CI ACNGT 1 cut(s) 38
Bst6I CTCTTC 7 cut(s) 568, 709, 909, 1074, 1095, 1179, 1359
BstAPI GCANNNNNTGC 2 cut(s) 566, 781
BstBI TTCGAA 2 cut(s) 128, 1601
BstC8I GCNNGC 8 cut(s) 163, 367, 748, 777, 856, 1059, 1162, 1278
BstDEI CTNAG 6 cut(s) 267, 372, 1202, 1270, 1497, 1608
BstDSI CCRYGG 3 cut(s) 105, 115, 1066
BstENI CCTNNNNNAGG 1 cut(s) 448
BstF5I GGATG 5 cut(s) 538, 592, 1017, 1030, 1628
BstFNI CGCG 2 cut(s) 593, 746
BstH2I RGCGCY 1 cut(s) 168
BstHHI GCGC 4 cut(s) 167, 759, 860, 952
BstKTI GATC 7 cut(s) 6, 214, 255, 744, 1050, 1137, 1267
BstMAI GTCTC 2 cut(s) 7, 1211
BstMBI GATC 7 cut(s) 3, 211, 252, 741, 1047, 1134, 1264
BstMWI GCNNNNNNNGC 8 cut(s) 189, 548, 557, 566, 743, 756, 781, 1282
BstNI CCWGG 1 cut(s) 1545
BstSCI CCNGG 1 cut(s) 1543
BstSLI GKGCMC 2 cut(s) 185, 994
BstUI CGCG 2 cut(s) 593, 746
BstV1I GCAGC 2 cut(s) 746, 990
BstV2I GAAGAC 1 cut(s) 1023
BstX2I RGATCY 1 cut(s) 1264
BstXI CCANNNNNNTGG 1 cut(s) 169
BstYI RGATCY 1 cut(s) 1264
BsuI GTATCC 1 cut(s) 885
BsuRI GGCC 5 cut(s) 331, 365, 524, 1071, 1126
BtgI CCRYGG 3 cut(s) 105, 115, 1066
BtrI CACGTC 1 cut(s) 1400
BtsCI GGATG 5 cut(s) 538, 592, 1017, 1030, 1628
BtsIMutI CAGTG 2 cut(s) 1050, 1524
Cac8I GCNNGC 8 cut(s) 163, 367, 748, 777, 856, 1059, 1162, 1278
CaiI CAGNNNCTG 1 cut(s) 274
CciI TCATGA 1 cut(s) 1209
CfoI GCGC 4 cut(s) 167, 759, 860, 952
Csp6I GTAC 3 cut(s) 658, 1222, 1451
CviQI GTAC 3 cut(s) 658, 1222, 1451
DdeI CTNAG 6 cut(s) 267, 372, 1202, 1270, 1497, 1608
DpnI GATC 7 cut(s) 5, 213, 254, 743, 1049, 1136, 1266
DpnII GATC 7 cut(s) 3, 211, 252, 741, 1047, 1134, 1264
EaeI YGGCCR 2 cut(s) 522, 1069
Eam1104I CTCTTC 7 cut(s) 568, 709, 909, 1074, 1095, 1179, 1359
EarI CTCTTC 7 cut(s) 568, 709, 909, 1074, 1095, 1179, 1359
Ecl136II GAGCTC 2 cut(s) 83, 151
Eco130I CCWWGG 3 cut(s) 105, 115, 1066
Eco147I AGGCCT 3 cut(s) 331, 365, 1126
Eco24I GRGCYC 2 cut(s) 85, 153
Eco31I GGTCTC 1 cut(s) 7
Eco32I GATATC 1 cut(s) 1199
Eco47III AGCGCT 1 cut(s) 166
Eco53kI GAGCTC 2 cut(s) 83, 151
Eco57I CTGAAG 1 cut(s) 1098
EcoICRI GAGCTC 2 cut(s) 83, 151
EcoNI CCTNNNNNAGG 1 cut(s) 448
EcoRI GAATTC 1 cut(s) 1039
EcoRII CCWGG 1 cut(s) 1543
EcoRV GATATC 1 cut(s) 1199
EcoT14I CCWWGG 3 cut(s) 105, 115, 1066
EcoT38I GRGCYC 2 cut(s) 85, 153
ErhI CCWWGG 3 cut(s) 105, 115, 1066
FauI CCCGC 3 cut(s) 312, 739, 755
FbaI TGATCA 2 cut(s) 3, 252
Fnu4HI GCNGC 5 cut(s) 591, 599, 760, 979, 1412
FokI GGATG 4 cut(s) 545, 599, 1024, 1037
FriOI GRGCYC 2 cut(s) 85, 153
Fsp4HI GCNGC 5 cut(s) 591, 599, 760, 979, 1412
FspBI CTAG 2 cut(s) 908, 1289
FspI TGCGCA 1 cut(s) 859
GlaI GCGC 4 cut(s) 166, 758, 859, 951
GluI GCNGC 5 cut(s) 591, 599, 760, 979, 1412
GsaI CCCAGC 2 cut(s) 1176, 1284
HaeII RGCGCY 1 cut(s) 168
HaeIII GGCC 5 cut(s) 331, 365, 524, 1071, 1126
HhaI GCGC 4 cut(s) 167, 759, 860, 952
Hin6I GCGC 4 cut(s) 165, 757, 858, 950
HinP1I GCGC 4 cut(s) 165, 757, 858, 950
HincII GTYRAC 2 cut(s) 41, 51
HindII GTYRAC 2 cut(s) 41, 51
HindIII AAGCTT 1 cut(s) 374
HinfI GANTC 5 cut(s) 403, 841, 1082, 1149, 1351
HphI GGTGA 6 cut(s) 184, 736, 824, 841, 1516, 1543
Hpy166II GTNNAC 3 cut(s) 41, 51, 660
Hpy188I TCNGA 7 cut(s) 8, 80, 146, 257, 270, 711, 1052
Hpy188III TCNNGA 3 cut(s) 908, 1210, 1476
Hpy8I GTNNAC 3 cut(s) 41, 51, 660
HpyAV CCTTC 3 cut(s) 244, 1015, 1171
HpyCH4III ACNGT 1 cut(s) 38
HpyCH4IV ACGT 1 cut(s) 1399
HpyCH4V TGCA 9 cut(s) 69, 369, 569, 737, 784, 1164, 1308, 1327, 1403
HpyF10VI GCNNNNNNNGC 8 cut(s) 189, 548, 557, 566, 743, 756, 781, 1282
HpyF3I CTNAG 6 cut(s) 267, 372, 1202, 1270, 1497, 1608
HpySE526I ACGT 1 cut(s) 1399
HspAI GCGC 4 cut(s) 165, 757, 858, 950
Ksp22I TGATCA 2 cut(s) 3, 252
Kzo9I GATC 7 cut(s) 3, 211, 252, 741, 1047, 1134, 1264
LmnI GCTCC 1 cut(s) 27
Lsp1109I GCAGC 2 cut(s) 746, 990
LweI GCATC 4 cut(s) 577, 942, 1095, 1314
MaeI CTAG 2 cut(s) 908, 1289
MaeII ACGT 1 cut(s) 1399
MaeIII GTNAC 2 cut(s) 724, 829
MalI GATC 7 cut(s) 5, 213, 254, 743, 1049, 1136, 1266
MbiI CCGCTC 1 cut(s) 1411
MboI GATC 7 cut(s) 3, 211, 252, 741, 1047, 1134, 1264
MboII GAAGA 9 cut(s) 585, 726, 896, 1023, 1091, 1112, 1196, 1346, 1546
MflI RGATCY 1 cut(s) 1264
MhlI GDGCHC 6 cut(s) 32, 85, 153, 185, 994, 1579
MlsI TGGCCA 1 cut(s) 1071
MluCI AATT 4 cut(s) 124, 879, 1039, 1422
MluNI TGGCCA 1 cut(s) 1071
MlyI GAGTC 4 cut(s) 850, 1091, 1158, 1345
MmeI TCCRAC 2 cut(s) 124, 1126
Mox20I TGGCCA 1 cut(s) 1071
MroXI GAANNNNTTC 1 cut(s) 1002
MscI TGGCCA 1 cut(s) 1071
MseI TTAA 4 cut(s) 387, 621, 1089, 1627
MslI CAYNNNNRTG 6 cut(s) 236, 945, 1071, 1322, 1380, 1529
Msp20I TGGCCA 1 cut(s) 1071
MspA1I CMGCKG 2 cut(s) 46, 140
MspR9I CCNGG 1 cut(s) 1545
Mva1269I GAATGC 2 cut(s) 739, 1061
MvaI CCWGG 1 cut(s) 1545
MvnI CGCG 2 cut(s) 593, 746
MwoI GCNNNNNNNGC 8 cut(s) 189, 548, 557, 566, 743, 756, 781, 1282
NcoI CCATGG 3 cut(s) 105, 115, 1066
NdeII GATC 7 cut(s) 3, 211, 252, 741, 1047, 1134, 1264
NlaIV GGNNCC 2 cut(s) 184, 708
NmeAIII GCCGAG 1 cut(s) 500
NmuCI GTSAC 2 cut(s) 724, 829
NsbI TGCGCA 1 cut(s) 859
NspV TTCGAA 2 cut(s) 128, 1601
OliI CACNNNNGTG 1 cut(s) 1529
PagI TCATGA 1 cut(s) 1209
PceI AGGCCT 3 cut(s) 331, 365, 1126
PctI GAATGC 2 cut(s) 739, 1061
PdmI GAANNNNTTC 1 cut(s) 1002
PfeI GAWTC 1 cut(s) 403
PflMI CCANNNNNTGG 1 cut(s) 1344
PkrI GCNGC 5 cut(s) 592, 600, 761, 980, 1413
PleI GAGTC 4 cut(s) 849, 1090, 1157, 1345
PpsI GAGTC 4 cut(s) 849, 1090, 1157, 1345
Psp124BI GAGCTC 2 cut(s) 85, 153
Psp6I CCWGG 1 cut(s) 1543
PspFI CCCAGC 2 cut(s) 1172, 1280
PspGI CCWGG 1 cut(s) 1543
PspN4I GGNNCC 2 cut(s) 184, 708
PstNI CAGNNNCTG 1 cut(s) 274
PsuI RGATCY 1 cut(s) 1264
RsaI GTAC 3 cut(s) 659, 1223, 1452
RsaNI GTAC 3 cut(s) 658, 1222, 1451
RseI CAYNNNNRTG 6 cut(s) 236, 945, 1071, 1322, 1380, 1529
SacI GAGCTC 2 cut(s) 85, 153
SaqAI TTAA 4 cut(s) 387, 621, 1089, 1627
SatI GCNGC 5 cut(s) 591, 599, 760, 979, 1412
Sau3AI GATC 7 cut(s) 3, 211, 252, 741, 1047, 1134, 1264
SchI GAGTC 4 cut(s) 850, 1091, 1158, 1345
ScrFI CCNGG 1 cut(s) 1545
SduI GDGCHC 6 cut(s) 32, 85, 153, 185, 994, 1579
SfaNI GCATC 4 cut(s) 577, 942, 1095, 1314
SfuI TTCGAA 2 cut(s) 128, 1601
SmiMI CAYNNNNRTG 6 cut(s) 236, 945, 1071, 1322, 1380, 1529
SmlI CTYRAG 3 cut(s) 86, 359, 1580
SmoI CTYRAG 3 cut(s) 86, 359, 1580
Sse9I AATT 4 cut(s) 124, 879, 1039, 1422
SseBI AGGCCT 3 cut(s) 331, 365, 1126
SspMI CTAG 2 cut(s) 908, 1289
SstI GAGCTC 2 cut(s) 85, 153
StuI AGGCCT 3 cut(s) 331, 365, 1126
StyD4I CCNGG 1 cut(s) 1543
StyI CCWWGG 3 cut(s) 105, 115, 1066
TaaI ACNGT 1 cut(s) 38
TaiI ACGT 1 cut(s) 1402
TaqI TCGA 4 cut(s) 128, 210, 1230, 1601
TasI AATT 4 cut(s) 124, 879, 1039, 1422
TatI WGTACW 2 cut(s) 1221, 1450
TauI GCSGC 3 cut(s) 593, 601, 1414
TfiI GAWTC 1 cut(s) 403
Tru1I TTAA 4 cut(s) 387, 621, 1089, 1627
Tru9I TTAA 4 cut(s) 387, 621, 1089, 1627
TscAI CASTG 2 cut(s) 1050, 1531
TseFI GTSAC 2 cut(s) 724, 829
TseI GCWGC 2 cut(s) 759, 978
Tsp45I GTSAC 2 cut(s) 724, 829
TspDTI ATGAA 7 cut(s) 226, 395, 461, 624, 1023, 1308, 1364
TspRI CASTG 2 cut(s) 1050, 1531
Van91I CCANNNNNTGG 1 cut(s) 1344
XagI CCTNNNNNAGG 1 cut(s) 448
XapI RAATTY 1 cut(s) 1039
XbaI TCTAGA 1 cut(s) 907
XmnI GAANNNNTTC 1 cut(s) 1002
XspI CTAG 2 cut(s) 908, 1289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.