Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002421

Physical Location & Seq

Genomic Coordinates Forward (+)

1788945 .. 1791440

Gene Structure 2496 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0022400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2409 bp

ATGGTCACAACCAGACCTCATCTCCTATCATCTTCCCTCCTTCCTCTCACAATTCAAAATCTCCAACAACCATTTCTTCCCTCCAAATCCAAACTCAACCAAACCCCAAACCCAAACTCAGACCCATCTAAACACCAACCAAGCATTACTTATTCTTTCACTCCCAGCCTTGAACAAACCCAGCAAATCCATGCCCACATGATCAAAACCCAATTTGACCACACCCTTCAAATCCCACTCAATTCACTCCAAACCCACATAAGCCCTTCAGCTCAACACAACTTTCTAATAACATCTTACATTAAAAACAACCACCCCAAAATTGCACTCAAATTATACACCCAAATGAGAAGAATGGGCACCCAAGTTGACAACTTTACTATCCCATCAGTCCTCAAGGCTTGTGGTCAAGCTTCTATGGAACTGTTAGGAAGAGAGACCCATGGTTTTGCATTGAAAAGCGGATTAGATAGCGATGTTTTCGTGTGTAATGCATTGATCCAAATGTATAGTGAATGTGGGAGCTTGGTGTTGGCACGCTTAGTATTTGATGAAATGATTGAAAGAGATGTGGTTTCTTGGAGTACCATGATTAATTGCTATGTGAGGAACAGAGTGTTTGGTGAGGCATTGGAACTTATAAGGGAGATGCATTGCTTGCAAGTGAAGCCTAGTGAGGTTGCTATGATGAGCATGGTTAGTCTATTTGCTGACATTGCTGATGCGAAAATGGGGAAAGCAATGCATGCTTATGTTGTGAGGAATAGCAGTAATGAGAGAATGGTGGTTCATGTTACTACTGCTTTAGTAGATATGTATGTCAAGTATGGGAATTTGGCTTATGGAAGGAGGCTGTTTGATGGGTTGGCTCAGAAAAGTGTTGTTTCCTGGACCACGATGATCGCGGGGTGCATTCGTTGCAATGAGGTAGAAGAGGGGGTGAAACTTTTTAAGAGAATGCTGGAGGAGAGGAAGTTTCCTAATGAGATTACAATGTTGAGTTTGGTTATCGAGTCGGGGTCTGTTGGAGCTCTGGAATTGGGGAAGTGGCTGCATGCCTATGTTTTGAGAAATGGGTTTATCGTGTCTTTGGCTTTGGCCACTGCTTTGGTTGATATGTATGGGAAGTGTGGTGAAGCCGAATATGCAAGGGCTGTGTTTGACATCATGGAGAAGAAAGATGTCATGATTTGGAGTGCTATGATCTCGGCTTATGCACGCTCCAATTGTACTAATCAGGCTTCGGAGCTCTTTTCCCGGATGAAGGATAGTGGAATAAGGCCAAATCAAGTTACAATGGTTAGCCTCATTTCACTATGTGCAGAAGTAGGAGCCCTTGATCTGGGAAAATGGGTTCATTCTTACATAAACCAGCAACGGATAGAAGTTGATGTGATACTAAGAACAGCTCTAGTGGACATGTATGCAAAATGTGGGGAGATAGATGCGGCTCTCAGGCTGTTTAGTGAAGCCAGATATCGAGACAGTCGAATGTGGAATGCTATGATCACTGGATTTTCCATGCATGGTTGTGGGAAACAAGCTTTAGAGCTCTTTGAAGAAATGCAGAGACAAGGTGTTGAGCCTAACGACATCACATTTATAGGGCTACTTCATGCTTGCAGCCATGCTGGGTTGGTGGCAGATGGAAAGAAGGTTTTTGAGAAAATGGTACTTGACTTTGGCTTAGCCCCAAAGGTTGAGCACTATGGATGCATGGTGGATTTGCTAGGCCGAGCAGGGAAGCTCGATGAGGCTCAAGAGTTGATCAAAACCATGCCCGTGGAGCCTAACGCAATTGTTTGGGGCTCCCTGCTTGCTGCCTGCAAAATTCATAAGAGGCCCAACTTGGCTGAAGTGGCAGCAAGACAACTGCTTGAGTTGGAACCTCAAAATTGCGGTTACAACGTTCTGATGTCAAACATCTATGCAGCATCAAACAGATGGATTGATGTTGCTGGGGTTAGAAAAGCTATGAAGGATAAAGGAACCAAGAAAGAACCAGGTCTCAGCTCAATTGAAGTAAATGGTGCAGTTCATGACTTCATGATGGGTGATAAAACACACCCGCAAACAAGAAAAATTTATGAAATGCTGGCTGAGATGATCAAGAAGCTAAAAGAGGCTGGATACACTCCTAATACATCTGTGGTTTTGCAGAACATAGATGAGGAAGAGAAAGAAACTGCGGTAAACTATCATAGTGAGAAACTGGCCATGGCATTTGGTCTAATCAGTACTGCTGCAGGTACCCCAATTCGGATTGTAAAAAATCTCCGAGTTTGTGATGACTGTCACACAGCAACAAAGCTGTTATCAAAGATTTATGGCAGAGTAATGATAGTAAGGGACCGTAATCGCTTTCACCACTTCATAGAAGGATCTTGTTCTTGTGGTGACTATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005536 GO:0005975 GO:0005976 GO:0005977 GO:0005978 GO:0005996 GO:0006012 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0006970 GO:0006979 GO:0007154 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0008466 GO:0009058 GO:0009059 GO:0009250 GO:0009266 GO:0009269 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0015980 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019318 GO:0030246 GO:0031668 GO:0033554 GO:0033692 GO:0033993 GO:0034637 GO:0034645 GO:0035250 GO:0035251 GO:0036094 GO:0042221 GO:0042631 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0046527 GO:0047216 GO:0048029 GO:0050896 GO:0051716 GO:0055114 GO:0070417 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071465 GO:0071496 GO:0071704 GO:0097305 GO:0104004 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00052 map00052

Pfam Domains

Protein Families

Glyco_transf_8

Protein Analysis

802

Amino Acids

89.86

Weight (kDa)

8.12

Isoelectric Point (pI)

37.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	94 - 135	3.8e-07	PPR repeat family
PPR_2	PF13041	189 - 234	2.9e-07	PPR repeat family
PPR	PF01535	192 - 218	8.1e-06	PPR repeat
PPR_2	PF13041	293 - 334	6.4e-08	PPR repeat family
PPR	PF01535	295 - 323	1.3e-06	PPR repeat
PPR_2	PF13041	393 - 441	1.7e-10	PPR repeat family
PPR	PF01535	397 - 426	6.6e-06	PPR repeat
PPR_2	PF13041	495 - 542	3e-12	PPR repeat family
PPR	PF01535	498 - 527	1.1e-07	PPR repeat
E_motif	PF20431	616 - 674	1.2e-18	E motif
Eplus_motif	PF20430	679 - 706	6.4e-06	E+ motif
DYW_deaminase	PF14432	710 - 802	5.5e-40	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002421)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26250 AT5G30500 AT5G30500
fragaria_vesca	FvH4_6g07920 FvH4_6g07930 FvH4_6g07930 FvH4_6g07930 FvH4_6g07930
malus_domestica	MD04G1190900.v1.1
prunus_persica	Prupe.6G309400_v2.0.a1 Prupe.6G309400_v2.0.a1
pyrus_communis	pycom04g16850
rosa_chinensis	RchiOBHm_Chr3g0457621 RchiOBHm_Chr3g0457631
rosa_laevigata	RLG00000025200 RLG00000025202 RLG00000025203
rosa_multiflora	Rmu_co8471647.1_g000001 Rmu_sc0005321.1_g000010 Rmu_sc0005321.1_g000011 Rmu_sc0007395.1_g000007 Rmu_sc0007395.1_g000008
rosa_roxburghii	Rroxscaffold_6G00421650 Rroxscaffold_6G00421660 Rroxscaffold_6G00421670
rosa_rugosa	Rorug03G0022200 Rorug03G0022300 Rorug03G0022400
rosa_samantha	Rh3AG082600 Rh3AG082700 Rh3AG083000 Rh3BG084900 Rh3BG085000 Rh3BG085500 Rh3CG085100 Rh3CG085200 Rh3CG085700 Rh3DG086400 Rh3DG086500
rosa_wichuraiana	Rw3G007100 Rw3G007110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	641
Acc36I	ACCTGC	1 cut(s)	2237
Acc65I	GGTACC	1 cut(s)	2249
AccB1I	GGYRCC	2 cut(s)	359, 2249
AccII	CGCG	1 cut(s)	905
AciI	CCGC	6 cut(s)	462, 905, 1448, 1899, 2069, 2189
AclI	AACGTT	1 cut(s)	1908
AclWI	GGATC	2 cut(s)	493, 2389
AcoI	YGGCCR	2 cut(s)	1098, 2214
AcsI	RAATTY	3 cut(s)	832, 1830, 2082
AcuI	CTGAAG	2 cut(s)	252, 1875
AdeI	CACNNNGTG	1 cut(s)	1319
AfaI	GTAC	5 cut(s)	586, 1231, 1674, 2239, 2251
AfiI	CCNNNNNNNGG	3 cut(s)	1264, 1342, 2259
AflIII	ACRYGT	1 cut(s)	1419
AgsI	TTSAA	7 cut(s)	56, 173, 230, 457, 563, 1559, 2021
AjnI	CCWGG	2 cut(s)	887, 2002
AjuI	GAANNNNNNNTTGG	2 cut(s)	57, 89
AloI	GAACNNNNNNTCC	2 cut(s)	1338, 1370
Alw21I	GWGCWC	4 cut(s)	1033, 1251, 1554, 1707
Alw26I	GTCTC	4 cut(s)	431, 1476, 1564, 2012
AlwI	GGATC	2 cut(s)	493, 2389
AoxI	GGCC	5 cut(s)	1098, 1280, 1732, 1841, 2214
ApeKI	GCWGC	6 cut(s)	1051, 1623, 1820, 1862, 1931, 2243
ApoI	RAATTY	3 cut(s)	832, 1830, 2082
AseI	ATTAAT	1 cut(s)	594
Asp718I	GGTACC	1 cut(s)	2249
AspS9I	GGNCC	3 cut(s)	891, 1842, 2350
AsuC2I	CCSGG	1 cut(s)	1258
AsuHPI	GGTGA	6 cut(s)	635, 952, 1145, 2066, 2357, 2408
AvaII	GGWCC	2 cut(s)	891, 2350
BaeGI	GKGCMC	1 cut(s)	362
BalI	TGGCCA	2 cut(s)	1100, 2216
BanI	GGYRCC	2 cut(s)	359, 2249
BanII	GRGCYC	5 cut(s)	1033, 1251, 1336, 1554, 1811
Bbv12I	GWGCWC	4 cut(s)	1033, 1251, 1554, 1707
BbvI	GCAGC	6 cut(s)	1038, 1635, 1807, 1874, 1943, 2230
BccI	CCATC	6 cut(s)	133, 394, 854, 1640, 1938, 2044
BciT130I	CCWGG	2 cut(s)	889, 2004
BciVI	GTATCC	1 cut(s)	2123
BclI	TGATCA	4 cut(s)	201, 1506, 1767, 2106
BcnI	CCSGG	1 cut(s)	1258
BcoDI	GTCTC	4 cut(s)	431, 1476, 1564, 2012
BfaI	CTAG	3 cut(s)	672, 1412, 1730
BfmI	CTRYAG	1 cut(s)	2244
BfuAI	ACCTGC	1 cut(s)	2237
BfuI	GTATCC	1 cut(s)	2123
BisI	GCNGC	7 cut(s)	1052, 1449, 1624, 1821, 1863, 1932, 2244
BlpI	GCTNAGC	1 cut(s)	1687
BlsI	GCNGC	7 cut(s)	1053, 1450, 1625, 1822, 1864, 1933, 2245
BmcAI	AGTACT	1 cut(s)	2239
Bme1390I	CCNGG	3 cut(s)	889, 1258, 2004
Bme18I	GGWCC	2 cut(s)	891, 2350
BmgT120I	GGNCC	3 cut(s)	891, 1842, 2350
BmiI	GGNNCC	8 cut(s)	361, 1333, 1788, 1810, 1887, 1990, 2251, 2351
BmrFI	CCNGG	3 cut(s)	889, 1258, 2004
BmsI	GCATC	5 cut(s)	639, 712, 1435, 1703, 1943
BpmI	CTGGAG	1 cut(s)	983
Bpu1102I	GCTNAGC	1 cut(s)	1687
BpuEI	CTTGAG	3 cut(s)	380, 1743, 1898
BpuMI	CCSGG	1 cut(s)	1258
BsaI	GGTCTC	2 cut(s)	431, 2012
BsaJI	CCNNGG	3 cut(s)	442, 1782, 2217
BsaXI	ACNNNNNCTCC	4 cut(s)	6, 36, 959, 989
Bsc4I	CCNNNNNNNGG	3 cut(s)	1264, 1342, 2259
Bse1I	ACTGG	2 cut(s)	1516, 2217
Bse3DI	GCAATG	4 cut(s)	652, 714, 747, 928
BseBI	CCWGG	2 cut(s)	889, 2004
BseDI	CCNNGG	3 cut(s)	442, 1782, 2217
BseGI	GGATG	2 cut(s)	1266, 1718
BseLI	CCNNNNNNNGG	3 cut(s)	1264, 1342, 2259
BseMI	GCAATG	4 cut(s)	652, 714, 747, 928
BseMII	CTCAG	5 cut(s)	132, 884, 1468, 2023, 2091
BseNI	ACTGG	2 cut(s)	1516, 2217
BseRI	GAGGAG	1 cut(s)	980
BseSI	GKGCMC	1 cut(s)	362
BseXI	GCAGC	6 cut(s)	1038, 1635, 1807, 1874, 1943, 2230
BseYI	CCCAGC	4 cut(s)	164, 180, 1631, 1958
BsgI	GTGCAG	2 cut(s)	1341, 2052
Bsh1236I	CGCG	1 cut(s)	905
BshFI	GGCC	5 cut(s)	1100, 1282, 1734, 1843, 2216
BshNI	GGYRCC	2 cut(s)	359, 2249
BsiHKAI	GWGCWC	4 cut(s)	1033, 1251, 1554, 1707
BsiSI	CCGG	1 cut(s)	1258
BslFI	GGGAC	1 cut(s)	2363
BslI	CCNNNNNNNGG	3 cut(s)	1264, 1342, 2259
BsmAI	GTCTC	4 cut(s)	431, 1476, 1564, 2012
BsmFI	GGGAC	1 cut(s)	2363
BsmI	GAATGC	3 cut(s)	912, 963, 1504
BsnI	GGCC	5 cut(s)	1100, 1282, 1734, 1843, 2216
Bso31I	GGTCTC	2 cut(s)	431, 2012
Bsp1286I	GDGCHC	7 cut(s)	362, 1033, 1251, 1336, 1554, 1707, 1811
Bsp143I	GATC	9 cut(s)	201, 498, 900, 1203, 1339, 1506, 1767, 2106, 2381
Bsp1720I	GCTNAGC	1 cut(s)	1687
Bsp19I	CCATGG	2 cut(s)	442, 2217
BspACI	CCGC	6 cut(s)	462, 905, 1448, 1899, 2069, 2189
BspANI	GGCC	5 cut(s)	1100, 1282, 1734, 1843, 2216
BspCNI	CTCAG	5 cut(s)	131, 883, 1467, 2022, 2092
BspFNI	CGCG	1 cut(s)	905
BspHI	TCATGA	3 cut(s)	1185, 2038, 2046
BspLI	GGNNCC	8 cut(s)	361, 1333, 1788, 1810, 1887, 1990, 2251, 2351
BspMAI	CTGCAG	1 cut(s)	2248
BspMI	ACCTGC	1 cut(s)	2237
BspPI	GGATC	2 cut(s)	493, 2389
BspT107I	GGYRCC	2 cut(s)	359, 2249
BspTNI	GGTCTC	2 cut(s)	431, 2012
BsrDI	GCAATG	4 cut(s)	652, 714, 747, 928
BsrI	ACTGG	2 cut(s)	1516, 2217
BssECI	CCNNGG	3 cut(s)	442, 1782, 2217
BssMI	GATC	9 cut(s)	201, 498, 900, 1203, 1339, 1506, 1767, 2106, 2381
BssT1I	CCWWGG	2 cut(s)	442, 2217
Bst2UI	CCWGG	2 cut(s)	889, 2004
Bst4CI	ACNGT	4 cut(s)	426, 1487, 2294, 2354
Bst6I	CTCTTC	3 cut(s)	427, 927, 2169
BstAPI	GCANNNNNTGC	3 cut(s)	658, 746, 918
BstC8I	GCNNGC	9 cut(s)	538, 659, 747, 1056, 1219, 1621, 1818, 1825, 2097
BstDEI	CTNAG	8 cut(s)	118, 541, 870, 1400, 1454, 1687, 2009, 2100
BstDSI	CCRYGG	3 cut(s)	442, 1782, 2217
BstF5I	GGATG	2 cut(s)	1266, 1718
BstFNI	CGCG	1 cut(s)	905
BstKTI	GATC	9 cut(s)	204, 501, 903, 1206, 1342, 1509, 1770, 2109, 2384
BstMAI	GTCTC	4 cut(s)	431, 1476, 1564, 2012
BstMBI	GATC	9 cut(s)	201, 498, 900, 1203, 1339, 1506, 1767, 2106, 2381
BstMWI	GCNNNNNNNGC	8 cut(s)	658, 667, 716, 746, 918, 1145, 1786, 1859
BstNI	CCWGG	2 cut(s)	889, 2004
BstNSI	RCATGY	3 cut(s)	749, 1058, 1423
BstSCI	CCNGG	3 cut(s)	887, 1256, 2002
BstSFI	CTRYAG	1 cut(s)	2244
BstSLI	GKGCMC	1 cut(s)	362
BstUI	CGCG	1 cut(s)	905
BstV1I	GCAGC	6 cut(s)	1038, 1635, 1807, 1874, 1943, 2230
BstX2I	RGATCY	1 cut(s)	2381
BstXI	CCANNNNNNTGG	2 cut(s)	1108, 1783
BstYI	RGATCY	1 cut(s)	2381
BsuI	GTATCC	1 cut(s)	2123
BsuRI	GGCC	5 cut(s)	1100, 1282, 1734, 1843, 2216
BtgI	CCRYGG	3 cut(s)	442, 1782, 2217
BtgZI	GCGATG	1 cut(s)	489
BtsCI	GGATG	2 cut(s)	1266, 1718
BtsI	GCAGTG	1 cut(s)	1101
BtsIMutI	CAGTG	2 cut(s)	1101, 1509
BveI	ACCTGC	1 cut(s)	2237
Cac8I	GCNNGC	9 cut(s)	538, 659, 747, 1056, 1219, 1621, 1818, 1825, 2097
CciI	TCATGA	3 cut(s)	1185, 2038, 2046
Cfr13I	GGNCC	3 cut(s)	891, 1842, 2350
CsiI	ACCWGGT	1 cut(s)	2002
Csp6I	GTAC	5 cut(s)	585, 1230, 1673, 2238, 2250
CspCI	CAANNNNNGTGG	2 cut(s)	385, 420
CviQI	GTAC	5 cut(s)	585, 1230, 1673, 2238, 2250
DdeI	CTNAG	8 cut(s)	118, 541, 870, 1400, 1454, 1687, 2009, 2100
DpnI	GATC	9 cut(s)	203, 500, 902, 1205, 1341, 1508, 1769, 2108, 2383
DpnII	GATC	9 cut(s)	201, 498, 900, 1203, 1339, 1506, 1767, 2106, 2381
DraIII	CACNNNGTG	1 cut(s)	1319
EaeI	YGGCCR	2 cut(s)	1098, 2214
Eam1104I	CTCTTC	3 cut(s)	427, 927, 2169
EarI	CTCTTC	3 cut(s)	427, 927, 2169
Ecl136II	GAGCTC	3 cut(s)	1031, 1249, 1552
Eco130I	CCWWGG	2 cut(s)	442, 2217
Eco24I	GRGCYC	5 cut(s)	1033, 1251, 1336, 1554, 1811
Eco31I	GGTCTC	2 cut(s)	431, 2012
Eco32I	GATATC	1 cut(s)	1478
Eco47I	GGWCC	2 cut(s)	891, 2350
Eco53kI	GAGCTC	3 cut(s)	1031, 1249, 1552
Eco57I	CTGAAG	2 cut(s)	252, 1875
EcoICRI	GAGCTC	3 cut(s)	1031, 1249, 1552
EcoRII	CCWGG	2 cut(s)	887, 2002
EcoRV	GATATC	1 cut(s)	1478
EcoT14I	CCWWGG	2 cut(s)	442, 2217
EcoT22I	ATGCAT	5 cut(s)	496, 654, 747, 1527, 1718
EcoT38I	GRGCYC	5 cut(s)	1033, 1251, 1336, 1554, 1811
ErhI	CCWWGG	2 cut(s)	442, 2217
FalI	AAGNNNNNCTT	2 cut(s)	133, 165
FaqI	GGGAC	1 cut(s)	2363
FauI	CCCGC	2 cut(s)	898, 2076
FbaI	TGATCA	4 cut(s)	201, 1506, 1767, 2106
Fnu4HI	GCNGC	7 cut(s)	1052, 1449, 1624, 1821, 1863, 1932, 2244
FokI	GGATG	2 cut(s)	1273, 1725
FriOI	GRGCYC	5 cut(s)	1033, 1251, 1336, 1554, 1811
Fsp4HI	GCNGC	7 cut(s)	1052, 1449, 1624, 1821, 1863, 1932, 2244
FspBI	CTAG	3 cut(s)	672, 1412, 1730
GluI	GCNGC	7 cut(s)	1052, 1449, 1624, 1821, 1863, 1932, 2244
GsaI	CCCAGC	4 cut(s)	168, 184, 1635, 1962
GsuI	CTGGAG	1 cut(s)	983
HaeIII	GGCC	5 cut(s)	1100, 1282, 1734, 1843, 2216
HapII	CCGG	1 cut(s)	1258
HincII	GTYRAC	1 cut(s)	370
HindII	GTYRAC	1 cut(s)	370
HindIII	AAGCTT	2 cut(s)	411, 1542
HinfI	GANTC	1 cut(s)	1013
HpaII	CCGG	1 cut(s)	1258
HphI	GGTGA	6 cut(s)	635, 952, 1145, 2066, 2357, 2408
Hpy166II	GTNNAC	3 cut(s)	370, 1417, 2194
Hpy188I	TCNGA	6 cut(s)	121, 873, 1246, 1914, 2262, 2279
Hpy188III	TCNNGA	7 cut(s)	1034, 1186, 1481, 1760, 2039, 2047, 2110
Hpy8I	GTNNAC	3 cut(s)	370, 1417, 2194
HpyAV	CCTTC	8 cut(s)	50, 236, 276, 840, 1258, 1648, 1972, 2372
HpyCH4III	ACNGT	4 cut(s)	426, 1487, 2294, 2354
HpyCH4IV	ACGT	1 cut(s)	1908
HpyF10VI	GCNNNNNNNGC	8 cut(s)	658, 667, 716, 746, 918, 1145, 1786, 1859
HpyF3I	CTNAG	8 cut(s)	118, 541, 870, 1400, 1454, 1687, 2009, 2100
HpySE526I	ACGT	1 cut(s)	1908
KpnI	GGTACC	1 cut(s)	2253
Ksp22I	TGATCA	4 cut(s)	201, 1506, 1767, 2106
Kzo9I	GATC	9 cut(s)	201, 498, 900, 1203, 1339, 1506, 1767, 2106, 2381
LmnI	GCTCC	7 cut(s)	522, 1028, 1226, 1246, 1331, 1786, 1814
Lsp1109I	GCAGC	6 cut(s)	1038, 1635, 1807, 1874, 1943, 2230
LweI	GCATC	5 cut(s)	639, 712, 1435, 1703, 1943
MabI	ACCWGGT	1 cut(s)	2002
MaeI	CTAG	3 cut(s)	672, 1412, 1730
MaeII	ACGT	1 cut(s)	1908
MaeIII	GTNAC	6 cut(s)	4, 793, 1291, 1901, 2294, 2396
MalI	GATC	9 cut(s)	203, 500, 902, 1205, 1341, 1508, 1769, 2108, 2383
MboI	GATC	9 cut(s)	201, 498, 900, 1203, 1339, 1506, 1767, 2106, 2381
MboII	GAAGA	8 cut(s)	24, 68, 363, 444, 944, 1186, 1571, 2186
MfeI	CAATTG	3 cut(s)	1225, 1797, 2016
MflI	RGATCY	1 cut(s)	2381
MhlI	GDGCHC	7 cut(s)	362, 1033, 1251, 1336, 1554, 1707, 1811
MlsI	TGGCCA	2 cut(s)	1100, 2216
MluNI	TGGCCA	2 cut(s)	1100, 2216
MlyI	GAGTC	1 cut(s)	1022
MmeI	TCCRAC	3 cut(s)	88, 1006, 1863
Mox20I	TGGCCA	2 cut(s)	1100, 2216
Mph1103I	ATGCAT	5 cut(s)	496, 654, 747, 1527, 1718
MscI	TGGCCA	2 cut(s)	1100, 2216
MseI	TTAA	3 cut(s)	303, 594, 951
MslI	CAYNNNNRTG	5 cut(s)	344, 750, 1059, 1530, 1781
Msp20I	TGGCCA	2 cut(s)	1100, 2216
MspI	CCGG	1 cut(s)	1258
MspR9I	CCNGG	3 cut(s)	889, 1258, 2004
MunI	CAATTG	3 cut(s)	1225, 1797, 2016
Mva1269I	GAATGC	3 cut(s)	912, 963, 1504
MvaI	CCWGG	2 cut(s)	889, 2004
MvnI	CGCG	1 cut(s)	905
MwoI	GCNNNNNNNGC	8 cut(s)	658, 667, 716, 746, 918, 1145, 1786, 1859
NciI	CCSGG	1 cut(s)	1258
NcoI	CCATGG	2 cut(s)	442, 2217
NdeII	GATC	9 cut(s)	201, 498, 900, 1203, 1339, 1506, 1767, 2106, 2381
NlaIV	GGNNCC	8 cut(s)	361, 1333, 1788, 1810, 1887, 1990, 2251, 2351
NmeAIII	GCCGAG	2 cut(s)	1187, 1760
NmuCI	GTSAC	3 cut(s)	4, 2294, 2396
NsiI	ATGCAT	5 cut(s)	496, 654, 747, 1527, 1718
NspI	RCATGY	3 cut(s)	749, 1058, 1423
PaeI	GCATGC	2 cut(s)	749, 1058
PagI	TCATGA	3 cut(s)	1185, 2038, 2046
PciI	ACATGT	1 cut(s)	1419
PcsI	WCGNNNNNNNCGW	1 cut(s)	1486
PctI	GAATGC	3 cut(s)	912, 963, 1504
PfoI	TCCNGGA	2 cut(s)	887, 1256
PkrI	GCNGC	7 cut(s)	1053, 1450, 1625, 1822, 1864, 1933, 2245
PleI	GAGTC	1 cut(s)	1021
PpsI	GAGTC	1 cut(s)	1021
PscI	ACATGT	1 cut(s)	1419
PshBI	ATTAAT	1 cut(s)	594
PsiI	TTATAA	1 cut(s)	641
Psp124BI	GAGCTC	3 cut(s)	1033, 1251, 1554
Psp1406I	AACGTT	1 cut(s)	1908
Psp6I	CCWGG	2 cut(s)	887, 2002
PspFI	CCCAGC	4 cut(s)	164, 180, 1631, 1958
PspGI	CCWGG	2 cut(s)	887, 2002
PspN4I	GGNNCC	8 cut(s)	361, 1333, 1788, 1810, 1887, 1990, 2251, 2351
PspPI	GGNCC	3 cut(s)	891, 1842, 2350
PstI	CTGCAG	1 cut(s)	2248
PsuI	RGATCY	1 cut(s)	2381
RsaI	GTAC	5 cut(s)	586, 1231, 1674, 2239, 2251
RsaNI	GTAC	5 cut(s)	585, 1230, 1673, 2238, 2250
RseI	CAYNNNNRTG	5 cut(s)	344, 750, 1059, 1530, 1781
SacI	GAGCTC	3 cut(s)	1033, 1251, 1554
SaqAI	TTAA	3 cut(s)	303, 594, 951
SatI	GCNGC	7 cut(s)	1052, 1449, 1624, 1821, 1863, 1932, 2244
Sau3AI	GATC	9 cut(s)	201, 498, 900, 1203, 1339, 1506, 1767, 2106, 2381
Sau96I	GGNCC	3 cut(s)	891, 1842, 2350
ScaI	AGTACT	1 cut(s)	2239
SchI	GAGTC	1 cut(s)	1022
ScrFI	CCNGG	3 cut(s)	889, 1258, 2004
SduI	GDGCHC	7 cut(s)	362, 1033, 1251, 1336, 1554, 1707, 1811
SexAI	ACCWGGT	1 cut(s)	2002
SfaNI	GCATC	5 cut(s)	639, 712, 1435, 1703, 1943
SfcI	CTRYAG	1 cut(s)	2244
SinI	GGWCC	2 cut(s)	891, 2350
SmiMI	CAYNNNNRTG	5 cut(s)	344, 750, 1059, 1530, 1781
SmlI	CTYRAG	3 cut(s)	395, 1758, 1877
SmoI	CTYRAG	3 cut(s)	395, 1758, 1877
SphI	GCATGC	2 cut(s)	749, 1058
SsiI	CCGC	6 cut(s)	462, 905, 1448, 1899, 2069, 2189
SspMI	CTAG	3 cut(s)	672, 1412, 1730
SstI	GAGCTC	3 cut(s)	1033, 1251, 1554
StyD4I	CCNGG	3 cut(s)	887, 1256, 2002
StyI	CCWWGG	2 cut(s)	442, 2217
TaaI	ACNGT	4 cut(s)	426, 1487, 2294, 2354
TaiI	ACGT	1 cut(s)	1911
TaqI	TCGA	4 cut(s)	1011, 1480, 1489, 1749
TatI	WGTACW	2 cut(s)	1229, 2237
TauI	GCSGC	1 cut(s)	1451
Tru1I	TTAA	3 cut(s)	303, 594, 951
Tru9I	TTAA	3 cut(s)	303, 594, 951
TscAI	CASTG	2 cut(s)	1108, 1516
TseFI	GTSAC	3 cut(s)	4, 2294, 2396
TseI	GCWGC	6 cut(s)	1051, 1623, 1820, 1862, 1931, 2243
Tsp45I	GTSAC	3 cut(s)	4, 2294, 2396
TspGWI	ACGGA	1 cut(s)	1393
TspRI	CASTG	2 cut(s)	1108, 1516
VpaK11BI	GGWCC	2 cut(s)	891, 2350
VspI	ATTAAT	1 cut(s)	594
XapI	RAATTY	3 cut(s)	832, 1830, 2082
XceI	RCATGY	3 cut(s)	749, 1058, 1423
XspI	CTAG	3 cut(s)	672, 1412, 1730
ZrmI	AGTACT	1 cut(s)	2239
Zsp2I	ATGCAT	5 cut(s)	496, 654, 747, 1527, 1718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.