Rh3CG085700

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Forward (+)
6705557 .. 6707199
1643 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG085700.1

Sequence Viewer

Length: 840 bp
ATGGCTCCTCATGATATCACCACCGCCGCTACCACCACTATCCTCTCCACCAAGGCCGCCACTGCCCCGAGCCGGGCCTATGTGACGTTCTTGGCCGGGAACGGCGACTACGTCAAAGGTGTGGTTGGTCTGGCCAAGGGTTTAAGGAAGGTGAAGAGCAAGTACCCACTAGTTGTGGCCATCTTGCCTGATGTGCCTGAAGAGCACCGTCAGATCCTAGTCTCCCAGGGCTGCATAGTCCGAGAGATTGAGCCTGTTCACCCTCCTGAGAACCAGACCCAGTACGCCATGGCGTACTACGTCATCAACTACTCCAAGCTTCGAATTTGGGAGTTTGTGGAGTATAGCAAGATGATCTACTTGGATGGAGATATCCAAGTCTTTCAGAACATTGACCACCTGTTTGACTACCCTGACAACTACTTTTACGCTGTGATGGATTGCTTTTGTGAGTCGAATTGGAGGGACAGTCCCCAGTTCAAGATTGGGTACTGCCAGCAGTGCCCGGACAGGGTACAGTGGGACAACAGCTTGGGTCCCAAGCCTCCTCTATACTTCAATGCTGGCATGTTTGTCTATGAGCCAAACTTGTCTACTTACCATGATCTCATGAGCACCCTCAAGACTTCTACTCCGACTTCGTTTGCTGAGCAGGATTTCTTGAATGTGTTCTTTAGGGACAAGTACGTGCCTATCCCTTCAAACTACAACCTTGTGTTGGCTATGCTCTGGCGCCACCCTGAAAACATTAAGCTAGAGGAGGTTATAGTTGTCCACTATTGTGCTAATGTGAGAATACTATATATCCACCAAGTACATCATGATCACCAATTTGATTGA

Protein Analysis

279

Amino Acids

32.3

Weight (kDa)

5.86

Isoelectric Point (pI)

42.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 29 - 263 3.4e-41 Glycosyl transferase family 8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 732
AccI GTMKAC 1 cut(s) 593
AciI CCGC 3 cut(s) 24, 27, 57
AclWI GGATC 1 cut(s) 208
AcoI YGGCCR 3 cut(s) 93, 132, 177
AcsI RAATTY 1 cut(s) 324
AcuI CTGAAG 1 cut(s) 219
AcyI GRCGYC 1 cut(s) 733
AfaI GTAC 7 cut(s) 164, 284, 296, 491, 516, 686, 816
AfiI CCNNNNNNNGG 4 cut(s) 72, 73, 511, 718
AgsI TTSAA 4 cut(s) 481, 559, 664, 702
AhlI ACTAGT 1 cut(s) 169
AjnI CCWGG 1 cut(s) 225
AleI CACNNNNGTG 1 cut(s) 780
AluBI AGCT 3 cut(s) 319, 531, 754
AluI AGCT 3 cut(s) 319, 531, 754
Alw21I GWGCWC 2 cut(s) 207, 617
Alw26I GTCTC 1 cut(s) 226
AlwI GGATC 1 cut(s) 208
Ama87I CYCGRG 1 cut(s) 67
AoxI GGCC 5 cut(s) 54, 75, 93, 132, 177
ApeKI GCWGC 1 cut(s) 231
ApoI RAATTY 1 cut(s) 324
ArsI GACNNNNNNTTYG 2 cut(s) 386, 418
Asp700I GAANNNNTTC 1 cut(s) 668
AspLEI GCGC 1 cut(s) 735
AspS9I GGNCC 2 cut(s) 75, 536
AsuC2I CCSGG 3 cut(s) 74, 97, 506
AsuHPI GGTGA 4 cut(s) 10, 163, 251, 818
AsuII TTCGAA 1 cut(s) 322
AvaI CYCGRG 1 cut(s) 67
AvaII GGWCC 1 cut(s) 536
BaeGI GKGCMC 1 cut(s) 506
BalI TGGCCA 2 cut(s) 134, 179
BanI GGYRCC 1 cut(s) 732
BarI GAAGNNNNNNTAC 2 cut(s) 146, 178
Bbv12I GWGCWC 2 cut(s) 207, 617
BbvI GCAGC 1 cut(s) 218
BccI CCATC 3 cut(s) 188, 359, 430
BceAI ACGGC 1 cut(s) 118
BciT130I CCWGG 1 cut(s) 227
BclI TGATCA 1 cut(s) 823
BcnI CCSGG 3 cut(s) 74, 97, 506
BcoDI GTCTC 1 cut(s) 226
BcuI ACTAGT 1 cut(s) 169
BfaI CTAG 3 cut(s) 170, 218, 755
BfoI RGCGCY 1 cut(s) 736
BisI GCNGC 3 cut(s) 27, 57, 232
BlpI GCTNAGC 1 cut(s) 648
BlsI GCNGC 3 cut(s) 28, 58, 233
Bme1390I CCNGG 4 cut(s) 74, 97, 227, 506
Bme18I GGWCC 1 cut(s) 536
BmeT110I CYCGRG 1 cut(s) 67
BmgT120I GGNCC 2 cut(s) 75, 536
BmiI GGNNCC 4 cut(s) 6, 537, 538, 734
BmrFI CCNGG 4 cut(s) 74, 97, 227, 506
BmrI ACTGGG 2 cut(s) 274, 469
BmuI ACTGGG 2 cut(s) 274, 469
Bpu1102I GCTNAGC 1 cut(s) 648
Bpu14I TTCGAA 1 cut(s) 322
BpuEI CTTGAG 1 cut(s) 605
BpuMI CCSGG 3 cut(s) 74, 97, 506
BsaAI YACGTR 1 cut(s) 688
BsaHI GRCGYC 1 cut(s) 733
BsaJI CCNNGG 5 cut(s) 51, 135, 225, 226, 288
BsaXI ACNNNNNCTCC 4 cut(s) 454, 484, 616, 646
Bsc4I CCNNNNNNNGG 4 cut(s) 72, 73, 511, 718
Bse1I ACTGG 2 cut(s) 280, 475
BseBI CCWGG 1 cut(s) 227
BseDI CCNNGG 5 cut(s) 51, 135, 225, 226, 288
BseGI GGATG 1 cut(s) 370
BseLI CCNNNNNNNGG 4 cut(s) 72, 73, 511, 718
BseMII CTCAG 2 cut(s) 258, 639
BseNI ACTGG 2 cut(s) 280, 475
BseRI GAGGAG 2 cut(s) 537, 773
BseSI GKGCMC 1 cut(s) 506
BseXI GCAGC 1 cut(s) 218
BshFI GGCC 5 cut(s) 56, 77, 95, 134, 179
BshNI GGYRCC 1 cut(s) 732
BsiHKAI GWGCWC 2 cut(s) 207, 617
BsiHKCI CYCGRG 1 cut(s) 67
BsiSI CCGG 3 cut(s) 73, 96, 506
BslFI GGGAC 5 cut(s) 456, 479, 522, 536, 692
BslI CCNNNNNNNGG 4 cut(s) 72, 73, 511, 718
BsmAI GTCTC 1 cut(s) 226
BsmFI GGGAC 5 cut(s) 456, 479, 522, 536, 692
BsnI GGCC 5 cut(s) 56, 77, 95, 134, 179
BsoBI CYCGRG 1 cut(s) 67
Bsp119I TTCGAA 1 cut(s) 322
Bsp1286I GDGCHC 3 cut(s) 207, 506, 617
Bsp143I GATC 4 cut(s) 213, 354, 604, 823
Bsp1720I GCTNAGC 1 cut(s) 648
Bsp19I CCATGG 1 cut(s) 288
BspACI CCGC 3 cut(s) 24, 27, 57
BspANI GGCC 5 cut(s) 56, 77, 95, 134, 179
BspCNI CTCAG 2 cut(s) 259, 640
BspHI TCATGA 3 cut(s) 10, 609, 820
BspLI GGNNCC 4 cut(s) 6, 537, 538, 734
BspPI GGATC 1 cut(s) 208
BspQI GCTCTTC 2 cut(s) 149, 195
BspT104I TTCGAA 1 cut(s) 322
BspT107I GGYRCC 1 cut(s) 732
BsrI ACTGG 2 cut(s) 280, 475
BssECI CCNNGG 5 cut(s) 51, 135, 225, 226, 288
BssMI GATC 4 cut(s) 213, 354, 604, 823
BssNI GRCGYC 1 cut(s) 733
BssT1I CCWWGG 3 cut(s) 51, 135, 288
Bst2UI CCWGG 1 cut(s) 227
Bst4CI ACNGT 3 cut(s) 209, 470, 519
Bst6I CTCTTC 2 cut(s) 149, 195
BstACI GRCGYC 1 cut(s) 733
BstBAI YACGTR 1 cut(s) 688
BstBI TTCGAA 1 cut(s) 322
BstC8I GCNNGC 2 cut(s) 497, 565
BstDEI CTNAG 2 cut(s) 267, 648
BstDSI CCRYGG 1 cut(s) 288
BstF5I GGATG 1 cut(s) 370
BstH2I RGCGCY 1 cut(s) 736
BstHHI GCGC 1 cut(s) 735
BstKTI GATC 4 cut(s) 216, 357, 607, 826
BstMAI GTCTC 1 cut(s) 226
BstMBI GATC 4 cut(s) 213, 354, 604, 823
BstMWI GCNNNNNNNGC 4 cut(s) 62, 193, 202, 501
BstNI CCWGG 1 cut(s) 227
BstNSI RCATGY 1 cut(s) 571
BstSCI CCNGG 4 cut(s) 72, 95, 225, 504
BstSLI GKGCMC 1 cut(s) 506
BstV1I GCAGC 1 cut(s) 218
BstX2I RGATCY 1 cut(s) 213
BstYI RGATCY 1 cut(s) 213
BsuRI GGCC 5 cut(s) 56, 77, 95, 134, 179
BtgI CCRYGG 1 cut(s) 288
BtsCI GGATG 1 cut(s) 370
BtsI GCAGTG 2 cut(s) 60, 506
BtsIMutI CAGTG 3 cut(s) 60, 506, 524
Cac8I GCNNGC 2 cut(s) 497, 565
CciI TCATGA 3 cut(s) 10, 609, 820
CfoI GCGC 1 cut(s) 735
Cfr13I GGNCC 2 cut(s) 75, 536
Csp6I GTAC 7 cut(s) 163, 283, 295, 490, 515, 685, 815
CviAII CATG 6 cut(s) 11, 289, 568, 602, 610, 821
CviQI GTAC 7 cut(s) 163, 283, 295, 490, 515, 685, 815
DdeI CTNAG 2 cut(s) 267, 648
DinI GGCGCC 1 cut(s) 734
DpnI GATC 4 cut(s) 215, 356, 606, 825
DpnII GATC 4 cut(s) 213, 354, 604, 823
EaeI YGGCCR 3 cut(s) 93, 132, 177
Eam1104I CTCTTC 2 cut(s) 149, 195
EarI CTCTTC 2 cut(s) 149, 195
Eco130I CCWWGG 3 cut(s) 51, 135, 288
Eco32I GATATC 2 cut(s) 16, 373
Eco47I GGWCC 1 cut(s) 536
Eco57I CTGAAG 1 cut(s) 219
Eco88I CYCGRG 1 cut(s) 67
EcoO109I RGGNCCY 1 cut(s) 536
EcoRII CCWGG 1 cut(s) 225
EcoRV GATATC 2 cut(s) 16, 373
EcoT14I CCWWGG 3 cut(s) 51, 135, 288
EgeI GGCGCC 1 cut(s) 734
EheI GGCGCC 1 cut(s) 734
ErhI CCWWGG 3 cut(s) 51, 135, 288
FaeI CATG 6 cut(s) 14, 292, 571, 605, 613, 824
FaqI GGGAC 5 cut(s) 456, 479, 522, 536, 692
FatI CATG 6 cut(s) 10, 288, 567, 601, 609, 820
FbaI TGATCA 1 cut(s) 823
FblI GTMKAC 1 cut(s) 593
Fnu4HI GCNGC 3 cut(s) 27, 57, 232
FokI GGATG 1 cut(s) 377
Fsp4HI GCNGC 3 cut(s) 27, 57, 232
FspBI CTAG 3 cut(s) 170, 218, 755
GlaI GCGC 1 cut(s) 734
GluI GCNGC 3 cut(s) 27, 57, 232
HaeII RGCGCY 1 cut(s) 736
HaeIII GGCC 5 cut(s) 56, 77, 95, 134, 179
HapII CCGG 3 cut(s) 73, 96, 506
HhaI GCGC 1 cut(s) 735
Hin1I GRCGYC 1 cut(s) 733
Hin1II CATG 6 cut(s) 14, 292, 571, 605, 613, 824
Hin6I GCGC 1 cut(s) 733
HinP1I GCGC 1 cut(s) 733
HindIII AAGCTT 1 cut(s) 317
HinfI GANTC 1 cut(s) 452
HpaII CCGG 3 cut(s) 73, 96, 506
HphI GGTGA 4 cut(s) 10, 163, 251, 818
Hpy166II GTNNAC 3 cut(s) 259, 594, 775
Hpy188I TCNGA 4 cut(s) 213, 242, 387, 636
Hpy188III TCNNGA 7 cut(s) 11, 266, 481, 610, 622, 661, 821
Hpy8I GTNNAC 3 cut(s) 259, 594, 775
HpyAV CCTTC 2 cut(s) 142, 708
HpyCH4III ACNGT 3 cut(s) 209, 470, 519
HpyCH4IV ACGT 4 cut(s) 86, 111, 300, 687
HpyCH4V TGCA 1 cut(s) 234
HpyF10VI GCNNNNNNNGC 4 cut(s) 62, 193, 202, 501
HpyF3I CTNAG 2 cut(s) 267, 648
HpySE526I ACGT 4 cut(s) 86, 111, 300, 687
Hsp92I GRCGYC 1 cut(s) 733
Hsp92II CATG 6 cut(s) 14, 292, 571, 605, 613, 824
HspAI GCGC 1 cut(s) 733
KasI GGCGCC 1 cut(s) 732
KflI GGGWCCC 1 cut(s) 536
Ksp22I TGATCA 1 cut(s) 823
Kzo9I GATC 4 cut(s) 213, 354, 604, 823
LguI GCTCTTC 2 cut(s) 149, 195
LmnI GCTCC 1 cut(s) 10
Lsp1109I GCAGC 1 cut(s) 218
MaeI CTAG 3 cut(s) 170, 218, 755
MaeII ACGT 4 cut(s) 86, 111, 300, 687
MaeIII GTNAC 1 cut(s) 82
MalI GATC 4 cut(s) 215, 356, 606, 825
MboI GATC 4 cut(s) 213, 354, 604, 823
MboII GAAGA 2 cut(s) 166, 212
MflI RGATCY 1 cut(s) 213
MhlI GDGCHC 3 cut(s) 207, 506, 617
MlsI TGGCCA 2 cut(s) 134, 179
MluCI AATT 3 cut(s) 324, 457, 830
MluNI TGGCCA 2 cut(s) 134, 179
Mly113I GGCGCC 1 cut(s) 733
MlyI GAGTC 1 cut(s) 461
MmeI TCCRAC 1 cut(s) 659
MnlI CCTC 9 cut(s) 18, 53, 273, 456, 555, 558, 629, 751, 754
Mox20I TGGCCA 2 cut(s) 134, 179
MroXI GAANNNNTTC 1 cut(s) 668
MscI TGGCCA 2 cut(s) 134, 179
MseI TTAA 2 cut(s) 143, 750
MslI CAYNNNNRTG 1 cut(s) 780
Msp20I TGGCCA 2 cut(s) 134, 179
MspI CCGG 3 cut(s) 73, 96, 506
MspR9I CCNGG 4 cut(s) 74, 97, 227, 506
MvaI CCWGG 1 cut(s) 227
MwoI GCNNNNNNNGC 4 cut(s) 62, 193, 202, 501
NarI GGCGCC 1 cut(s) 733
NciI CCSGG 3 cut(s) 74, 97, 506
NcoI CCATGG 1 cut(s) 288
NdeII GATC 4 cut(s) 213, 354, 604, 823
NlaIII CATG 6 cut(s) 14, 292, 571, 605, 613, 824
NlaIV GGNNCC 4 cut(s) 6, 537, 538, 734
NmuCI GTSAC 1 cut(s) 82
NspI RCATGY 1 cut(s) 571
NspV TTCGAA 1 cut(s) 322
OliI CACNNNNGTG 1 cut(s) 780
PagI TCATGA 3 cut(s) 10, 609, 820
PasI CCCWGGG 1 cut(s) 226
PciSI GCTCTTC 2 cut(s) 149, 195
PcsI WCGNNNNNNNCGW 1 cut(s) 108
PdmI GAANNNNTTC 1 cut(s) 668
PflFI GACNNNGTC 1 cut(s) 110
PkrI GCNGC 3 cut(s) 28, 58, 233
PleI GAGTC 1 cut(s) 460
PluTI GGCGCC 1 cut(s) 736
PpsI GAGTC 1 cut(s) 460
Ppu21I YACGTR 1 cut(s) 688
PpuMI RGGWCCY 1 cut(s) 536
Psp5II RGGWCCY 1 cut(s) 536
Psp6I CCWGG 1 cut(s) 225
PspGI CCWGG 1 cut(s) 225
PspN4I GGNNCC 4 cut(s) 6, 537, 538, 734
PspPI GGNCC 2 cut(s) 75, 536
PspPPI RGGWCCY 1 cut(s) 536
PsrI GAACNNNNNNTAC 2 cut(s) 92, 124
PsuI RGATCY 1 cut(s) 213
PsyI GACNNNGTC 1 cut(s) 110
RsaI GTAC 7 cut(s) 164, 284, 296, 491, 516, 686, 816
RsaNI GTAC 7 cut(s) 163, 283, 295, 490, 515, 685, 815
RseI CAYNNNNRTG 1 cut(s) 780
SapI GCTCTTC 2 cut(s) 149, 195
SaqAI TTAA 2 cut(s) 143, 750
SatI GCNGC 3 cut(s) 27, 57, 232
Sau3AI GATC 4 cut(s) 213, 354, 604, 823
Sau96I GGNCC 2 cut(s) 75, 536
SchI GAGTC 1 cut(s) 461
ScrFI CCNGG 4 cut(s) 74, 97, 227, 506
SduI GDGCHC 3 cut(s) 207, 506, 617
SfoI GGCGCC 1 cut(s) 734
SfuI TTCGAA 1 cut(s) 322
SinI GGWCC 1 cut(s) 536
SmiMI CAYNNNNRTG 1 cut(s) 780
SmlI CTYRAG 1 cut(s) 620
SmoI CTYRAG 1 cut(s) 620
SpeI ACTAGT 1 cut(s) 169
Sse9I AATT 3 cut(s) 324, 457, 830
SsiI CCGC 3 cut(s) 24, 27, 57
SspDI GGCGCC 1 cut(s) 732
SspMI CTAG 3 cut(s) 170, 218, 755
StyD4I CCNGG 4 cut(s) 72, 95, 225, 504
StyI CCWWGG 3 cut(s) 51, 135, 288
TaaI ACNGT 3 cut(s) 209, 470, 519
TaiI ACGT 4 cut(s) 89, 114, 303, 690
TaqI TCGA 2 cut(s) 322, 455
TasI AATT 3 cut(s) 324, 457, 830
TatI WGTACW 1 cut(s) 814
TauI GCSGC 2 cut(s) 29, 59
Tru1I TTAA 2 cut(s) 143, 750
Tru9I TTAA 2 cut(s) 143, 750
TscAI CASTG 3 cut(s) 67, 506, 524
TseFI GTSAC 1 cut(s) 82
TseI GCWGC 1 cut(s) 231
Tsp45I GTSAC 1 cut(s) 82
TspRI CASTG 3 cut(s) 67, 506, 524
Tth111I GACNNNGTC 1 cut(s) 110
VpaK11BI GGWCC 1 cut(s) 536
XapI RAATTY 1 cut(s) 324
XceI RCATGY 1 cut(s) 571
XcmI CCANNNNNNNNNTGG 1 cut(s) 482
XmiI GTMKAC 1 cut(s) 593
XmnI GAANNNNTTC 1 cut(s) 668
XspI CTAG 3 cut(s) 170, 218, 755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.