transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G38090 |
| fragaria_vesca | FvH4_6g11950 |
| malus_domestica | MD04G1147800.v1.1 MD12G1161100.v1.1 |
| prunus_persica | Prupe.6G271600_v2.0.a1 |
| pyrus_communis | pycom04g13340 pycom12g15290 |
| rosa_chinensis | RchiOBHm_Chr3g0463761 |
| rosa_laevigata | RLG00000024759 |
| rosa_multiflora | Rmu_sc0000142.1_g000001 Rmu_sc0003267.1_g000043 |
| rosa_roxburghii | Rroxscaffold_6G00416330 |
| rosa_rugosa | Rorug03G0067300 |
| rosa_samantha | Rh3AG124500 Rh3BG129100 Rh3CG131400 Rh3DG129700 |
| rosa_wichuraiana | Rw3G010520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 772 |
| Acc36I | ACCTGC | 1 cut(s) | 772 |
| AccI | GTMKAC | 1 cut(s) | 600 |
| AccII | CGCG | 1 cut(s) | 862 |
| AciI | CCGC | 2 cut(s) | 296, 862 |
| AclWI | GGATC | 6 cut(s) | 494, 533, 546, 557, 781, 991 |
| AcsI | RAATTY | 4 cut(s) | 434, 478, 521, 737 |
| AfaI | GTAC | 2 cut(s) | 613, 692 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 331, 621 |
| AgsI | TTSAA | 5 cut(s) | 8, 64, 331, 439, 961 |
| AjiI | CACGTC | 1 cut(s) | 880 |
| AluBI | AGCT | 3 cut(s) | 108, 353, 395 |
| AluI | AGCT | 3 cut(s) | 108, 353, 395 |
| Alw26I | GTCTC | 1 cut(s) | 903 |
| AlwI | GGATC | 6 cut(s) | 494, 533, 546, 557, 781, 991 |
| AoxI | GGCC | 3 cut(s) | 322, 671, 931 |
| ApoI | RAATTY | 4 cut(s) | 434, 478, 521, 737 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 463, 495 |
| AspLEI | GCGC | 1 cut(s) | 862 |
| AspS9I | GGNCC | 2 cut(s) | 322, 932 |
| AsuHPI | GGTGA | 2 cut(s) | 572, 796 |
| AxyI | CCTNAGG | 1 cut(s) | 182 |
| BamHI | GGATCC | 1 cut(s) | 538 |
| BccI | CCATC | 2 cut(s) | 167, 478 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 48, 82 |
| BclI | TGATCA | 2 cut(s) | 93, 820 |
| BcoDI | GTCTC | 1 cut(s) | 903 |
| BfaI | CTAG | 3 cut(s) | 105, 392, 1008 |
| BfmI | CTRYAG | 1 cut(s) | 273 |
| BfuAI | ACCTGC | 1 cut(s) | 772 |
| BmgBI | CACGTC | 1 cut(s) | 880 |
| BmgT120I | GGNCC | 2 cut(s) | 322, 932 |
| BmiI | GGNNCC | 2 cut(s) | 323, 540 |
| BmsI | GCATC | 3 cut(s) | 45, 268, 928 |
| BpuEI | CTTGAG | 1 cut(s) | 628 |
| BsaBI | GATNNNNATC | 1 cut(s) | 258 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 939, 969 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 331, 621 |
| Bse1I | ACTGG | 3 cut(s) | 325, 454, 861 |
| Bse21I | CCTNAGG | 1 cut(s) | 182 |
| Bse8I | GATNNNNATC | 1 cut(s) | 258 |
| BseGI | GGATG | 5 cut(s) | 155, 159, 177, 343, 725 |
| BseJI | GATNNNNATC | 1 cut(s) | 258 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 331, 621 |
| BseMII | CTCAG | 2 cut(s) | 196, 537 |
| BseNI | ACTGG | 3 cut(s) | 325, 454, 861 |
| Bsh1236I | CGCG | 1 cut(s) | 862 |
| BshFI | GGCC | 3 cut(s) | 324, 673, 933 |
| BslFI | GGGAC | 1 cut(s) | 484 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 331, 621 |
| BsmAI | GTCTC | 1 cut(s) | 903 |
| BsmFI | GGGAC | 1 cut(s) | 484 |
| BsnI | GGCC | 3 cut(s) | 324, 673, 933 |
| Bsp143I | GATC | 7 cut(s) | 93, 499, 538, 562, 786, 820, 983 |
| BspACI | CCGC | 2 cut(s) | 296, 862 |
| BspANI | GGCC | 3 cut(s) | 324, 673, 933 |
| BspCNI | CTCAG | 2 cut(s) | 195, 538 |
| BspFNI | CGCG | 1 cut(s) | 862 |
| BspLI | GGNNCC | 2 cut(s) | 323, 540 |
| BspMAI | CTGCAG | 1 cut(s) | 277 |
| BspMI | ACCTGC | 1 cut(s) | 772 |
| BspPI | GGATC | 6 cut(s) | 494, 533, 546, 557, 781, 991 |
| BsrI | ACTGG | 3 cut(s) | 325, 454, 861 |
| BssMI | GATC | 7 cut(s) | 93, 499, 538, 562, 786, 820, 983 |
| BssNAI | GTATAC | 1 cut(s) | 601 |
| Bst1107I | GTATAC | 1 cut(s) | 601 |
| Bst6I | CTCTTC | 1 cut(s) | 3 |
| BstC8I | GCNNGC | 2 cut(s) | 71, 170 |
| BstDEI | CTNAG | 2 cut(s) | 182, 546 |
| BstF5I | GGATG | 5 cut(s) | 155, 159, 177, 343, 725 |
| BstFNI | CGCG | 1 cut(s) | 862 |
| BstHHI | GCGC | 1 cut(s) | 862 |
| BstKTI | GATC | 7 cut(s) | 96, 502, 541, 565, 789, 823, 986 |
| BstMAI | GTCTC | 1 cut(s) | 903 |
| BstMBI | GATC | 7 cut(s) | 93, 499, 538, 562, 786, 820, 983 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 859 |
| BstNSI | RCATGY | 1 cut(s) | 877 |
| BstSFI | CTRYAG | 1 cut(s) | 273 |
| BstUI | CGCG | 1 cut(s) | 862 |
| BstX2I | RGATCY | 2 cut(s) | 538, 983 |
| BstYI | RGATCY | 2 cut(s) | 538, 983 |
| BstZ17I | GTATAC | 1 cut(s) | 601 |
| Bsu36I | CCTNAGG | 1 cut(s) | 182 |
| BsuRI | GGCC | 3 cut(s) | 324, 673, 933 |
| BtrI | CACGTC | 1 cut(s) | 880 |
| BtsCI | GGATG | 5 cut(s) | 155, 159, 177, 343, 725 |
| BtsIMutI | CAGTG | 2 cut(s) | 461, 854 |
| BveI | ACCTGC | 1 cut(s) | 772 |
| Cac8I | GCNNGC | 2 cut(s) | 71, 170 |
| CfoI | GCGC | 1 cut(s) | 862 |
| Cfr13I | GGNCC | 2 cut(s) | 322, 932 |
| Csp6I | GTAC | 2 cut(s) | 612, 691 |
| CviAII | CATG | 4 cut(s) | 81, 136, 742, 874 |
| CviJI | RGCY | 9 cut(s) | 108, 324, 353, 395, 495, 673, 853, 915, 933 |
| CviKI_1 | RGCY | 9 cut(s) | 108, 324, 353, 395, 495, 673, 853, 915, 933 |
| CviQI | GTAC | 2 cut(s) | 612, 691 |
| DdeI | CTNAG | 2 cut(s) | 182, 546 |
| DpnI | GATC | 7 cut(s) | 95, 501, 540, 564, 788, 822, 985 |
| DpnII | GATC | 7 cut(s) | 93, 499, 538, 562, 786, 820, 983 |
| DraI | TTTAAA | 1 cut(s) | 528 |
| Eam1104I | CTCTTC | 1 cut(s) | 3 |
| EarI | CTCTTC | 1 cut(s) | 3 |
| Eco32I | GATATC | 1 cut(s) | 190 |
| Eco81I | CCTNAGG | 1 cut(s) | 182 |
| EcoRI | GAATTC | 2 cut(s) | 434, 737 |
| EcoRV | GATATC | 1 cut(s) | 190 |
| EcoT22I | ATGCAT | 1 cut(s) | 943 |
| FaeI | CATG | 4 cut(s) | 84, 139, 745, 877 |
| FaqI | GGGAC | 1 cut(s) | 484 |
| FatI | CATG | 4 cut(s) | 80, 135, 741, 873 |
| FauNDI | CATATG | 1 cut(s) | 943 |
| FbaI | TGATCA | 2 cut(s) | 93, 820 |
| FblI | GTMKAC | 1 cut(s) | 600 |
| FokI | GGATG | 5 cut(s) | 142, 146, 164, 350, 732 |
| FspBI | CTAG | 3 cut(s) | 105, 392, 1008 |
| GlaI | GCGC | 1 cut(s) | 861 |
| HaeIII | GGCC | 3 cut(s) | 324, 673, 933 |
| HhaI | GCGC | 1 cut(s) | 862 |
| Hin1II | CATG | 4 cut(s) | 84, 139, 745, 877 |
| Hin6I | GCGC | 1 cut(s) | 860 |
| HinP1I | GCGC | 1 cut(s) | 860 |
| HinfI | GANTC | 6 cut(s) | 60, 418, 442, 472, 617, 896 |
| HphI | GGTGA | 2 cut(s) | 572, 796 |
| Hpy166II | GTNNAC | 1 cut(s) | 601 |
| Hpy188I | TCNGA | 1 cut(s) | 837 |
| Hpy188III | TCNNGA | 2 cut(s) | 439, 634 |
| Hpy8I | GTNNAC | 1 cut(s) | 601 |
| HpyAV | CCTTC | 2 cut(s) | 199, 470 |
| HpyCH4IV | ACGT | 2 cut(s) | 665, 879 |
| HpyCH4V | TGCA | 5 cut(s) | 141, 168, 275, 877, 941 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 859 |
| HpyF3I | CTNAG | 2 cut(s) | 182, 546 |
| HpySE526I | ACGT | 2 cut(s) | 665, 879 |
| Hsp92II | CATG | 4 cut(s) | 84, 139, 745, 877 |
| HspAI | GCGC | 1 cut(s) | 860 |
| Ksp22I | TGATCA | 2 cut(s) | 93, 820 |
| Kzo9I | GATC | 7 cut(s) | 93, 499, 538, 562, 786, 820, 983 |
| LpnPI | CCDG | 9 cut(s) | 169, 338, 384, 435, 467, 655, 767, 842, 948 |
| LweI | GCATC | 3 cut(s) | 45, 268, 928 |
| MaeI | CTAG | 3 cut(s) | 105, 392, 1008 |
| MaeII | ACGT | 2 cut(s) | 665, 879 |
| MaeIII | GTNAC | 2 cut(s) | 310, 401 |
| MalI | GATC | 7 cut(s) | 95, 501, 540, 564, 788, 822, 985 |
| MboI | GATC | 7 cut(s) | 93, 499, 538, 562, 786, 820, 983 |
| MboII | GAAGA | 3 cut(s) | 20, 437, 575 |
| MflI | RGATCY | 2 cut(s) | 538, 983 |
| MluCI | AATT | 8 cut(s) | 100, 381, 434, 478, 521, 551, 737, 964 |
| MlyI | GAGTC | 3 cut(s) | 466, 611, 905 |
| MnlI | CCTC | 7 cut(s) | 51, 191, 274, 541, 551, 576, 760 |
| Mph1103I | ATGCAT | 1 cut(s) | 943 |
| MseI | TTAA | 3 cut(s) | 527, 870, 1002 |
| MslI | CAYNNNNRTG | 1 cut(s) | 375 |
| MvnI | CGCG | 1 cut(s) | 862 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 859 |
| NdeI | CATATG | 1 cut(s) | 943 |
| NdeII | GATC | 7 cut(s) | 93, 499, 538, 562, 786, 820, 983 |
| NlaIII | CATG | 4 cut(s) | 84, 139, 745, 877 |
| NlaIV | GGNNCC | 2 cut(s) | 323, 540 |
| NsiI | ATGCAT | 1 cut(s) | 943 |
| NspI | RCATGY | 1 cut(s) | 877 |
| PaqCI | CACCTGC | 1 cut(s) | 772 |
| PfeI | GAWTC | 3 cut(s) | 60, 418, 442 |
| PleI | GAGTC | 3 cut(s) | 466, 611, 904 |
| PpsI | GAGTC | 3 cut(s) | 466, 611, 904 |
| PspN4I | GGNNCC | 2 cut(s) | 323, 540 |
| PspPI | GGNCC | 2 cut(s) | 322, 932 |
| PstI | CTGCAG | 1 cut(s) | 277 |
| PsuI | RGATCY | 2 cut(s) | 538, 983 |
| RsaI | GTAC | 2 cut(s) | 613, 692 |
| RsaNI | GTAC | 2 cut(s) | 612, 691 |
| RseI | CAYNNNNRTG | 1 cut(s) | 375 |
| SaqAI | TTAA | 3 cut(s) | 527, 870, 1002 |
| Sau3AI | GATC | 7 cut(s) | 93, 499, 538, 562, 786, 820, 983 |
| Sau96I | GGNCC | 2 cut(s) | 322, 932 |
| SchI | GAGTC | 3 cut(s) | 466, 611, 905 |
| SfaNI | GCATC | 3 cut(s) | 45, 268, 928 |
| SfcI | CTRYAG | 1 cut(s) | 273 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 375 |
| SmlI | CTYRAG | 1 cut(s) | 607 |
| SmoI | CTYRAG | 1 cut(s) | 607 |
| Sse9I | AATT | 8 cut(s) | 100, 381, 434, 478, 521, 551, 737, 964 |
| SsiI | CCGC | 2 cut(s) | 296, 862 |
| SspMI | CTAG | 3 cut(s) | 105, 392, 1008 |
| TaiI | ACGT | 2 cut(s) | 668, 882 |
| TaqI | TCGA | 2 cut(s) | 279, 482 |
| TasI | AATT | 8 cut(s) | 100, 381, 434, 478, 521, 551, 737, 964 |
| TatI | WGTACW | 1 cut(s) | 690 |
| TfiI | GAWTC | 3 cut(s) | 60, 418, 442 |
| Tru1I | TTAA | 3 cut(s) | 527, 870, 1002 |
| Tru9I | TTAA | 3 cut(s) | 527, 870, 1002 |
| TscAI | CASTG | 2 cut(s) | 461, 861 |
| TspDTI | ATGAA | 7 cut(s) | 100, 166, 257, 354, 730, 783, 825 |
| TspRI | CASTG | 2 cut(s) | 461, 861 |
| XapI | RAATTY | 4 cut(s) | 434, 478, 521, 737 |
| XceI | RCATGY | 1 cut(s) | 877 |
| XmiI | GTMKAC | 1 cut(s) | 600 |
| XspI | CTAG | 3 cut(s) | 105, 392, 1008 |
| Zsp2I | ATGCAT | 1 cut(s) | 943 |