Rorug03G0075200

Uracil phosphoribosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0011897
Physical Location & Seq
Reverse (-)
5887420 .. 5891760
4341 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0075200.1

Sequence Viewer

Length: 2283 bp
ATGGCTTTGCTGAGTGAGGGCCTAACTCAGATTCTGATACCTGTGGCTGCCTTGATTGGACTTGCTTTTGCTTTGCTTCAGTGGTTTCTGGTTTCGAAGGTGAAGGTGTCTTTTACCTCCAGTGATGGAAATGGCTGTAAGGACAAGTTGATCATGGGAGAAGAAGAAGAGGGTATTGACAACTTTTCGGTTACCCTCAAGTGTGCTGAAATTCAAAATGCCATTTCTGAGGGGGCAACCTCTTTCTTATATACCGAATATAAGTACCTCAGTATCTTCATGGGTGTATTTGGTGTTGTCATCTTCCTCTTCCTTGGTTCTGTTAAGGGCTTCAGCACTGAAAGCGAACCCTGCACTTACAACACAGGGAATATGTGCAAACCAGCTTTAGCCAATGCCTTCTTTAGTACTGTTGCGTTCTTGCTTGGTGCTCTTACATCAGTCATCTCCGGTTTTCTTGGGATGAAGATTGCAACGTATGCCAATGCTAGAACAACTCTTGAAGCGAGGAAGGGTGTTGGGAAGGCTTTTATCACTGCTTTTCGGTCTGGTGCTGTGATGGGATTTCTTCTTGCTGCCAATGGCCTGTTGGTTCTGTACATCACTATTAATTTGTTTAAGCTGTATTATGGGGATGACTGGGAAGGACTGTATGAGTCGATTACTGGTTATGGACTTGGAGGTTCTTCAATGGCATTGTTTGGAAGAGTTGGGGGAGGTATATACACAAAAGCAGCTGATGTTGGTGCTGATCTTGTTGGGAAAGTTGAACGAAACATCCCCGAAGATGATCCACGAAACCCAGCTGTCATTGCAGACAATGTGGGTGACAATGTAGGAGACATTGCAGGCATGGGATCTGACCTGTTCGGATCATATGCCGAGTCAACTTGTGCAGCATTGTTTGTTGCATCTATATCCTCCTTTGGTGTCACTCATAACTATGTAGCCATGTCTTATCCCTTGATTATAAGCTCAATGGGGATTGTTGTTTGCTTGATAACAACCCTTTTCGCAACTGATCTGTTTGAAATTAAGAACGCGAGTGCAATTGAACCTGCCTTGAAGCGACAGCTTGTTATCTCAACTGTTCTAATGACTGCTGGGATTGCTGTGGTCACTTTTGTAGCTTTGCCATCAGAGTTCACTATGTTCAGTTTTGGGACCGATAAGACTGTCAAGAACTGGTACCTTTTCTTTTGTGTGTCAATTGGCTTGTGGGCTGGTCTTGTTATTGGATATACTACCGAGTACTATACTAGCAATGCATACAGTCCAGTGCAGGATGTGGCAGATTCTTGCAAGACTGGTGCTGCAACAAATGTGATCTTTGGTTTGGCTTTGGGTTACAAGTCAGTTATCATTCCTGTTTTCGCCATTGCATTTGCTATATATGTCAGCTTTAGCTTGGCTGCTATGTATGGAATTGCTGTGGCTGCTTTGGGAATGCTCAGTACTATCTCCACTGGTCTTGCAATTGATGCATATGGCCCCATAAGCGACAATGCTGGTGGCATTGCAGAAATGGCTGGGATGAGCCATGAGATTCGTGAAAGAACAGATGCTTTGGATGCTGCTGGAAACACCACTGCTGCTATTGGCAAGGGTTTTGCTATTGGATCAGCTGCTCTTGTTTCTCTTGCTTTGTTTGGTGCCTATGTCAGCAGAGCAGGAATAGAAACCGTTGATGTGTTGACCCCGAAAGTCTTCATTGGCTTGCTTGTGGGAGCTATGCTTCCATACTGGTTTTCAGCCATGACAATGAAGAGTGTAGGAAGTGCAGCACTCAAAATGGTGGAAGAGGTTCGCAGACAATTCAATACTATTCCGGGGCTCATGGAAGGAACAGCAAAGCCAGACTATGCAACATGTGTCAAGATTTCTACTGATGCTTCCCTCAGGGAGATGATCCCCCCAGGCGCTTTGGTCATGCTTACTCCTCTCATTGCTGGTACCTTCTTCGGAGTAGAAACTCTTGCTGGCATTCTTGCTGGTTCACTTGTTTCTGGTGTTCAGGTTGCCATTTCAGCTTCAAACACTGGCGGGGCATGGGATAATGCAAAGAAATACATAGAGGCCGGTAATTCCGAGCATGCCAAATCCCTGGGTCCTAAGGGTTCGGATCCTCACAAGGCGGCTGTGATAGGTGACACCATTGGAGATCCCCTCAAGGACACTTCTGGTCCTTCACTCAACATTCTCATCAAGCTCATGGCAGTTGAGTCCTTGGTTTTTGCACCCTTCTTTGCAGCTCATGGAGGCCTAATCTTCAAATGGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004845 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009267 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009987 GO:0009991 GO:0016036 GO:0016301 GO:0016310 GO:0016740 GO:0016757 GO:0016763 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0031667 GO:0031668 GO:0031669 GO:0032502 GO:0033554 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0042594 GO:0043094 GO:0043097 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0050896 GO:0051716 GO:0055086 GO:0071496 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659
KEGG Pathways
Metabolic & Signaling
ko00240 ko01100 map00240 map01100
Pfam Domains
Protein Families
UPRTase

Protein Analysis

760

Amino Acids

79.72

Weight (kDa)

5.03

Isoelectric Point (pI)

22.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
H_PPase PF03030 59 - 745 9.9e-256 Inorganic H+ pyrophosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011897)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G53900 AT3G53900
fragaria_vesca FvH4_6g12970 FvH4_6g12970
malus_domestica MD04G1136300.v1.1 MD12G1150800.v1.1
prunus_persica Prupe.6G262400_v2.0.a1
pyrus_communis pycom12g14470
rosa_chinensis RchiOBHm_Chr3g0465081
rosa_laevigata RLG00000024657
rosa_multiflora Rmu_sc0004362.1_g000003
rosa_roxburghii Rroxscaffold_6G00415260
rosa_rugosa Rorug03G0075100 Rorug03G0075200
rosa_samantha Rh3BG138900 Rh3CG141000 Rh3CG149300 Rh3DG140100
rosa_wichuraiana Rw3G011360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 971
Acc36I ACCTGC 1 cut(s) 1066
Acc65I GGTACC 2 cut(s) 1188, 1952
AccB1I GGYRCC 3 cut(s) 1188, 1652, 1952
AccII CGCG 1 cut(s) 1043
AciI CCGC 2 cut(s) 2043, 2135
AclWI GGATC 8 cut(s) 785, 865, 880, 1627, 1903, 2117, 2130, 2156
AcsI RAATTY 1 cut(s) 210
AcuI CTGAAG 2 cut(s) 62, 316
AfaI GTAC 7 cut(s) 266, 409, 599, 1190, 1253, 1456, 1954
AflIII ACRYGT 1 cut(s) 1868
AjnI CCWGG 2 cut(s) 1915, 2103
AloI GAACNNNNNNTCC 2 cut(s) 762, 794
Alw21I GWGCWC 1 cut(s) 433
Alw26I GTCTC 1 cut(s) 834
AlwI GGATC 8 cut(s) 785, 865, 880, 1627, 1903, 2117, 2130, 2156
AlwNI CAGNNNCTG 1 cut(s) 34
AoxI GGCC 5 cut(s) 19, 583, 1489, 2076, 2260
ApoI RAATTY 1 cut(s) 210
AseI ATTAAT 1 cut(s) 609
Asp700I GAANNNNTTC 2 cut(s) 1706, 1803
Asp718I GGTACC 2 cut(s) 1188, 1952
AspLEI GCGC 1 cut(s) 1922
AspS9I GGNCC 5 cut(s) 19, 1164, 1490, 2108, 2183
AsuC2I CCSGG 1 cut(s) 1830
AsuHPI GGTGA 3 cut(s) 112, 839, 2159
AsuII TTCGAA 1 cut(s) 95
AvaII GGWCC 3 cut(s) 1164, 2108, 2183
AxyI CCTNAGG 2 cut(s) 1898, 2112
BaeI ACNNNNGTAYC 2 cut(s) 256, 289
BamHI GGATCC 1 cut(s) 2122
BanI GGYRCC 3 cut(s) 1188, 1652, 1952
BanII GRGCYC 1 cut(s) 1836
BbsI GAAGAC 1 cut(s) 1699
Bbv12I GWGCWC 1 cut(s) 433
BccI CCATC 3 cut(s) 119, 553, 1144
BciT130I CCWGG 2 cut(s) 1917, 2105
BclI TGATCA 1 cut(s) 150
BcnI CCSGG 1 cut(s) 1830
BcoDI GTCTC 1 cut(s) 834
BfaI CTAG 2 cut(s) 489, 1260
BfoI RGCGCY 1 cut(s) 1923
BfuAI ACCTGC 1 cut(s) 1066
BmcAI AGTACT 3 cut(s) 409, 1253, 1456
Bme1390I CCNGG 3 cut(s) 1830, 1917, 2105
Bme18I GGWCC 3 cut(s) 1164, 2108, 2183
BmgT120I GGNCC 5 cut(s) 19, 1164, 1490, 2108, 2183
BmiI GGNNCC 7 cut(s) 1165, 1190, 1492, 1654, 1954, 2109, 2124
BmrFI CCNGG 3 cut(s) 1830, 1917, 2105
BmrI ACTGGG 1 cut(s) 649
BmsI GCATC 5 cut(s) 920, 1471, 1552, 1561, 1879
BmuI ACTGGG 1 cut(s) 649
BpiI GAAGAC 1 cut(s) 1699
BplI GAGNNNNNCTC 2 cut(s) 2151, 2183
BpmI CTGGAG 1 cut(s) 103
Bpu14I TTCGAA 1 cut(s) 95
BpuEI CTTGAG 2 cut(s) 182, 2153
BpuMI CCSGG 1 cut(s) 1830
BsaJI CCNNGG 6 cut(s) 313, 1829, 1915, 2103, 2104, 2226
BsaWI WCCGGW 1 cut(s) 449
Bse118I RCCGGY 1 cut(s) 2078
Bse1I ACTGG 9 cut(s) 120, 644, 670, 1190, 1277, 1312, 1471, 1748, 2044
Bse21I CCTNAGG 2 cut(s) 1898, 2112
Bse3DI GCAATG 6 cut(s) 810, 843, 1270, 1377, 1515, 1944
BseBI CCWGG 2 cut(s) 1917, 2105
BseDI CCNNGG 6 cut(s) 313, 1829, 1915, 2103, 2104, 2226
BseGI GGATG 6 cut(s) 468, 640, 777, 1291, 1539, 1576
BseMI GCAATG 6 cut(s) 810, 843, 1270, 1377, 1515, 1944
BseMII CTCAG 5 cut(s) 41, 219, 283, 1465, 1912
BseNI ACTGG 9 cut(s) 120, 644, 670, 1190, 1277, 1312, 1471, 1748, 2044
BseRI GAGGAG 1 cut(s) 1929
BseYI CCCAGC 3 cut(s) 802, 1103, 1529
BsgI GTGCAG 4 cut(s) 337, 915, 1301, 1800
Bsh1236I CGCG 1 cut(s) 1043
BshFI GGCC 5 cut(s) 21, 585, 1491, 2078, 2262
BshNI GGYRCC 3 cut(s) 1188, 1652, 1952
BsiHKAI GWGCWC 1 cut(s) 433
BsiSI CCGG 3 cut(s) 450, 1829, 2079
BslFI GGGAC 1 cut(s) 1177
BsmAI GTCTC 1 cut(s) 834
BsmFI GGGAC 1 cut(s) 1177
BsmI GAATGC 2 cut(s) 1452, 1983
BsnI GGCC 5 cut(s) 21, 585, 1491, 2078, 2262
Bsp119I TTCGAA 1 cut(s) 95
Bsp1286I GDGCHC 2 cut(s) 433, 1836
Bsp1407I TGTACA 1 cut(s) 597
BspACI CCGC 2 cut(s) 2043, 2135
BspANI GGCC 5 cut(s) 21, 585, 1491, 2078, 2262
BspCNI CTCAG 5 cut(s) 40, 220, 282, 1464, 1911
BspFNI CGCG 1 cut(s) 1043
BspLI GGNNCC 7 cut(s) 1165, 1190, 1492, 1654, 1954, 2109, 2124
BspMI ACCTGC 1 cut(s) 1066
BspPI GGATC 8 cut(s) 785, 865, 880, 1627, 1903, 2117, 2130, 2156
BspT104I TTCGAA 1 cut(s) 95
BspT107I GGYRCC 3 cut(s) 1188, 1652, 1952
BsrDI GCAATG 6 cut(s) 810, 843, 1270, 1377, 1515, 1944
BsrFI RCCGGY 1 cut(s) 2078
BsrGI TGTACA 1 cut(s) 597
BsrI ACTGG 9 cut(s) 120, 644, 670, 1190, 1277, 1312, 1471, 1748, 2044
BssAI RCCGGY 1 cut(s) 2078
BssECI CCNNGG 6 cut(s) 313, 1829, 1915, 2103, 2104, 2226
BssT1I CCWWGG 2 cut(s) 313, 2226
Bst2UI CCWGG 2 cut(s) 1917, 2105
Bst4CI ACNGT 6 cut(s) 412, 651, 1090, 1177, 1274, 1684
Bst6I CTCTTC 5 cut(s) 162, 314, 700, 1760, 1794
BstAPI GCANNNNNTGC 2 cut(s) 479, 1481
BstAUI TGTACA 1 cut(s) 597
BstBI TTCGAA 1 cut(s) 95
BstC8I GCNNGC 4 cut(s) 850, 1718, 1981, 2094
BstDEI CTNAG 7 cut(s) 11, 27, 228, 269, 1451, 1898, 2112
BstEII GGTNACC 1 cut(s) 190
BstF5I GGATG 6 cut(s) 468, 640, 777, 1291, 1539, 1576
BstFNI CGCG 1 cut(s) 1043
BstH2I RGCGCY 1 cut(s) 1923
BstHHI GCGC 1 cut(s) 1922
BstMAI GTCTC 1 cut(s) 834
BstNI CCWGG 2 cut(s) 1917, 2105
BstNSI RCATGY 2 cut(s) 1872, 2096
BstPI GGTNACC 1 cut(s) 190
BstSCI CCNGG 3 cut(s) 1828, 1915, 2103
BstUI CGCG 1 cut(s) 1043
BstV2I GAAGAC 1 cut(s) 1699
BstX2I RGATCY 3 cut(s) 857, 2122, 2161
BstXI CCANNNNNNTGG 1 cut(s) 2104
BstYI RGATCY 3 cut(s) 857, 2122, 2161
Bsu36I CCTNAGG 2 cut(s) 1898, 2112
BsuRI GGCC 5 cut(s) 21, 585, 1491, 2078, 2262
BtsCI GGATG 6 cut(s) 468, 640, 777, 1291, 1539, 1576
BtsI GCAGTG 2 cut(s) 534, 1587
BtsIMutI CAGTG 8 cut(s) 86, 127, 336, 534, 1284, 1464, 1587, 2037
BveI ACCTGC 1 cut(s) 1066
Cac8I GCNNGC 4 cut(s) 850, 1718, 1981, 2094
CaiI CAGNNNCTG 1 cut(s) 34
CfoI GCGC 1 cut(s) 1922
Cfr10I RCCGGY 1 cut(s) 2078
Cfr13I GGNCC 5 cut(s) 19, 1164, 1490, 2108, 2183
Csp6I GTAC 7 cut(s) 265, 408, 598, 1189, 1252, 1455, 1953
CspCI CAANNNNNGTGG 4 cut(s) 1453, 1488, 1492, 1527
CviQI GTAC 7 cut(s) 265, 408, 598, 1189, 1252, 1455, 1953
DdeI CTNAG 7 cut(s) 11, 27, 228, 269, 1451, 1898, 2112
Eam1104I CTCTTC 5 cut(s) 162, 314, 700, 1760, 1794
EarI CTCTTC 5 cut(s) 162, 314, 700, 1760, 1794
Eco130I CCWWGG 2 cut(s) 313, 2226
Eco147I AGGCCT 1 cut(s) 2262
Eco24I GRGCYC 1 cut(s) 1836
Eco47I GGWCC 3 cut(s) 1164, 2108, 2183
Eco57I CTGAAG 2 cut(s) 62, 316
Eco81I CCTNAGG 2 cut(s) 1898, 2112
Eco91I GGTNACC 1 cut(s) 190
EcoO109I RGGNCCY 2 cut(s) 19, 2108
EcoO65I GGTNACC 1 cut(s) 190
EcoRII CCWGG 2 cut(s) 1915, 2103
EcoT14I CCWWGG 2 cut(s) 313, 2226
EcoT22I ATGCAT 2 cut(s) 1270, 1486
EcoT38I GRGCYC 1 cut(s) 1836
ErhI CCWWGG 2 cut(s) 313, 2226
FaqI GGGAC 1 cut(s) 1177
FauI CCCGC 1 cut(s) 2036
FauNDI CATATG 2 cut(s) 877, 1486
FbaI TGATCA 1 cut(s) 150
FokI GGATG 6 cut(s) 475, 647, 764, 1298, 1546, 1583
FriOI GRGCYC 1 cut(s) 1836
FspBI CTAG 2 cut(s) 489, 1260
GlaI GCGC 1 cut(s) 1921
GsaI CCCAGC 3 cut(s) 806, 1107, 1533
GsuI CTGGAG 1 cut(s) 103
HaeII RGCGCY 1 cut(s) 1923
HaeIII GGCC 5 cut(s) 21, 585, 1491, 2078, 2262
HapII CCGG 3 cut(s) 450, 1829, 2079
HhaI GCGC 1 cut(s) 1922
Hin6I GCGC 1 cut(s) 1920
HinP1I GCGC 1 cut(s) 1920
HincII GTYRAC 2 cut(s) 888, 1695
HindII GTYRAC 2 cut(s) 888, 1695
HinfI GANTC 6 cut(s) 31, 656, 884, 1295, 1546, 2222
HpaII CCGG 3 cut(s) 450, 1829, 2079
HphI GGTGA 3 cut(s) 112, 839, 2159
Hpy166II GTNNAC 4 cut(s) 888, 1146, 1695, 1997
Hpy188I TCNGA 9 cut(s) 30, 36, 229, 862, 872, 1141, 1964, 2089, 2122
Hpy188III TCNNGA 4 cut(s) 500, 1180, 1550, 1876
Hpy8I GTNNAC 4 cut(s) 888, 1146, 1695, 1997
HpyCH4III ACNGT 6 cut(s) 412, 651, 1090, 1177, 1274, 1684
HpyCH4IV ACGT 1 cut(s) 476
HpyF3I CTNAG 7 cut(s) 11, 27, 228, 269, 1451, 1898, 2112
HpySE526I ACGT 1 cut(s) 476
HspAI GCGC 1 cut(s) 1920
KpnI GGTACC 2 cut(s) 1192, 1956
Ksp22I TGATCA 1 cut(s) 150
LmnI GCTCC 1 cut(s) 1727
LweI GCATC 5 cut(s) 920, 1471, 1552, 1561, 1879
MaeI CTAG 2 cut(s) 489, 1260
MaeII ACGT 1 cut(s) 476
MaeIII GTNAC 6 cut(s) 190, 827, 931, 1117, 1346, 2147
MfeI CAATTG 3 cut(s) 1050, 1209, 1476
MflI RGATCY 3 cut(s) 857, 2122, 2161
MhlI GDGCHC 2 cut(s) 433, 1836
MluCI AATT 9 cut(s) 210, 610, 1032, 1050, 1209, 1425, 1476, 1814, 2083
MlyI GAGTC 3 cut(s) 665, 893, 2231
Mph1103I ATGCAT 2 cut(s) 1270, 1486
MroXI GAANNNNTTC 2 cut(s) 1706, 1803
MseI TTAA 4 cut(s) 324, 609, 618, 1035
MslI CAYNNNNRTG 2 cut(s) 942, 1760
MspA1I CMGCKG 3 cut(s) 737, 806, 1625
MspI CCGG 3 cut(s) 450, 1829, 2079
MspR9I CCNGG 3 cut(s) 1830, 1917, 2105
MunI CAATTG 3 cut(s) 1050, 1209, 1476
Mva1269I GAATGC 2 cut(s) 1452, 1983
MvaI CCWGG 2 cut(s) 1917, 2105
MvnI CGCG 1 cut(s) 1043
NciI CCSGG 1 cut(s) 1830
NdeI CATATG 2 cut(s) 877, 1486
NlaIV GGNNCC 7 cut(s) 1165, 1190, 1492, 1654, 1954, 2109, 2124
NmeAIII GCCGAG 1 cut(s) 907
NmuCI GTSAC 4 cut(s) 827, 931, 1117, 2147
NsiI ATGCAT 2 cut(s) 1270, 1486
NspI RCATGY 2 cut(s) 1872, 2096
NspV TTCGAA 1 cut(s) 95
PaeI GCATGC 1 cut(s) 2096
PasI CCCWGGG 1 cut(s) 2104
PceI AGGCCT 1 cut(s) 2262
PciI ACATGT 1 cut(s) 1868
PctI GAATGC 2 cut(s) 1452, 1983
PdmI GAANNNNTTC 2 cut(s) 1706, 1803
PfeI GAWTC 3 cut(s) 31, 1295, 1546
PleI GAGTC 3 cut(s) 664, 892, 2230
PpsI GAGTC 3 cut(s) 664, 892, 2230
PpuMI RGGWCCY 1 cut(s) 2108
PscI ACATGT 1 cut(s) 1868
PshBI ATTAAT 1 cut(s) 609
PsiI TTATAA 1 cut(s) 971
Psp5II RGGWCCY 1 cut(s) 2108
Psp6I CCWGG 2 cut(s) 1915, 2103
PspEI GGTNACC 1 cut(s) 190
PspFI CCCAGC 3 cut(s) 802, 1103, 1529
PspGI CCWGG 2 cut(s) 1915, 2103
PspN4I GGNNCC 7 cut(s) 1165, 1190, 1492, 1654, 1954, 2109, 2124
PspPI GGNCC 5 cut(s) 19, 1164, 1490, 2108, 2183
PspPPI RGGWCCY 1 cut(s) 2108
PstNI CAGNNNCTG 1 cut(s) 34
PsuI RGATCY 3 cut(s) 857, 2122, 2161
PvuII CAGCTG 3 cut(s) 737, 806, 1625
RsaI GTAC 7 cut(s) 266, 409, 599, 1190, 1253, 1456, 1954
RsaNI GTAC 7 cut(s) 265, 408, 598, 1189, 1252, 1455, 1953
RseI CAYNNNNRTG 2 cut(s) 942, 1760
SaqAI TTAA 4 cut(s) 324, 609, 618, 1035
Sau96I GGNCC 5 cut(s) 19, 1164, 1490, 2108, 2183
ScaI AGTACT 3 cut(s) 409, 1253, 1456
SchI GAGTC 3 cut(s) 665, 893, 2231
ScrFI CCNGG 3 cut(s) 1830, 1917, 2105
SduI GDGCHC 2 cut(s) 433, 1836
SfaNI GCATC 5 cut(s) 920, 1471, 1552, 1561, 1879
SfuI TTCGAA 1 cut(s) 95
SinI GGWCC 3 cut(s) 1164, 2108, 2183
SmiMI CAYNNNNRTG 2 cut(s) 942, 1760
SmlI CTYRAG 2 cut(s) 197, 2168
SmoI CTYRAG 2 cut(s) 197, 2168
SphI GCATGC 1 cut(s) 2096
Sse9I AATT 9 cut(s) 210, 610, 1032, 1050, 1209, 1425, 1476, 1814, 2083
SseBI AGGCCT 1 cut(s) 2262
SsiI CCGC 2 cut(s) 2043, 2135
SspMI CTAG 2 cut(s) 489, 1260
StuI AGGCCT 1 cut(s) 2262
StyD4I CCNGG 3 cut(s) 1828, 1915, 2103
StyI CCWWGG 2 cut(s) 313, 2226
TaaI ACNGT 6 cut(s) 412, 651, 1090, 1177, 1274, 1684
TaiI ACGT 1 cut(s) 479
TaqI TCGA 2 cut(s) 95, 659
TaqII GACCGA 2 cut(s) 534, 1181
TasI AATT 9 cut(s) 210, 610, 1032, 1050, 1209, 1425, 1476, 1814, 2083
TatI WGTACW 4 cut(s) 407, 597, 1251, 1454
TauI GCSGC 1 cut(s) 2138
TfiI GAWTC 3 cut(s) 31, 1295, 1546
Tru1I TTAA 4 cut(s) 324, 609, 618, 1035
Tru9I TTAA 4 cut(s) 324, 609, 618, 1035
TscAI CASTG 8 cut(s) 86, 127, 343, 541, 1284, 1471, 1594, 2044
TseFI GTSAC 4 cut(s) 827, 931, 1117, 2147
Tsp45I GTSAC 4 cut(s) 827, 931, 1117, 2147
TspDTI ATGAA 4 cut(s) 268, 479, 1699, 1778
TspRI CASTG 8 cut(s) 86, 127, 343, 541, 1284, 1471, 1594, 2044
VpaK11BI GGWCC 3 cut(s) 1164, 2108, 2183
VspI ATTAAT 1 cut(s) 609
XapI RAATTY 1 cut(s) 210
XceI RCATGY 2 cut(s) 1872, 2096
XcmI CCANNNNNNNNNTGG 1 cut(s) 586
XmnI GAANNNNTTC 2 cut(s) 1706, 1803
XspI CTAG 2 cut(s) 489, 1260
ZrmI AGTACT 3 cut(s) 409, 1253, 1456
Zsp2I ATGCAT 2 cut(s) 1270, 1486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.