Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0016057

Physical Location & Seq

Genomic Coordinates Forward (+)

8884844 .. 8887089

Gene Structure 2246 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0110600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGGCTTTAGCAATTTCTTTAGGCTTCCTTCTCTTCTTTCCCATTTGTTCTCTTGCTCAAGGATATAATTTCTCGTTCAGAGGATTCAAAGAAAGTGATGAAAAGCTGAATCTCATACTTGAAGGAGATTCCATAATCATAGAGGGCATGATCAGACTCACCAACGCAACTGGTATTATAGGCCAAGCATTTTATCAGAAACCCATAGCCATGTTCGATAAAAATTCCTCTTCGTATCCAAACGCTTCTTCTTTCAGCACAGAGTTTTTCTTTGCCATAGTATCCCCGGGCCGCGTTGGCTTTGGCCTAGCCTTTACATTGTCTCCCTCTCCGAGATTCCCCGGGGCTGAAGCCGGCCAGTACTTCGGAATTTTCAACTCTTCAAACGACAACAAATCCTCTAACCATATCCTTGCTGTAGAATTCGACACGGTCAATGGTTACAGCGGAAGCAAGAATTCAGATGGAAACCATGTTGGTATTGACATCAACAGCGTCTACTCTATAGCATCTGAACCAACTTCTTACTATACCACAGGTGCACACAAAGAAGAGGTAAACATGTTAAGTGGTGATCTTATACATGCTTGGATAGACTATGATGGCAATGCTCAAATTTTGAATGTGACAATTTCTCCCAAAAATGAAAACAAACGACCCAAACCCCTTTTATCCTATCCTATTGATCTATCTTTTGTTCTTCAAGAGACTATGTATGCTGGCTTTTCCGCATCCACTGGAGATGACCAGTCGAGCTCTCATTACATAGCGGCATGGAGTTTTGCAGTGAATGGAATTGCAAGCGAACTCTTTCAACTTCCAAACCCACCAAAAGTTTCATCTTCAAACCCACCAAAAGTTTCATCTTCAAACCCACCAAAAGTGTTAGAAGAACCCCAATCGAAGGCTCCTATTGTGGCCTCATCTGTTGTAGCTTTCTTCTTGTTAGCTACTTTTGTTCTCTTTTTAGTGTACAGAAGACTGATGCCGTTGGAGACTCTTGAAGATTGGGAGATTGATTGTCCTCACAGGTTCCGGTACAAGGATCTTCATGCAGCAACAAAAGGTTTTAAAGACTCTAATGTGATAGGAGCTGGCGGATTTGGTACAGTTTACAAGGGTGTCTTGCCATCTTCTGGATGTGAAGTTGCAGTTAAGAAGATAACAAGAAATGGGAACCAAGGAATGAGGGAATTCGCAGCCGAAATTGAGAGCTTGGGACAATTAAGGCACAAGAACTTGGTCAATCTGCAAGGCTGGTGTAAGAAAAAGACCGACCTCCTTCTAGTCTACGATTACATACCAAATGGAAGCCTTGATACTCTCATTTTCCATCCGAGAGACAACTTTGTATTGAGCTGGGAACAAAGATTCAATATCATCAGAGGCATTGCCTCAGGATTGTTGTATCTTCATGAAGAATGGGAGCAAGTTGTGATTCACAGAGATGTGAAGTCCAGTAATGTCTTGATAGATGCAGACCTGAATGCTCGGCTTAGTGACTTTGGCCTTGCAAGGCTACATGATCATGGAAAAATATCACACACCACAGGTCTGGTTGGCACAATTGGGTACATTGCACCGGAATTAGCTCAAACAGGGAAGGCCTCAGCATCCTCAGACGTGTTTGCATACGGCATTTTGCTCCTTGAAGTAGCCAGTGGGAGAAGACCAATCGGCTCAGGCCACACGGATCAATTCATATTGGCCCATTGGGTGATGGAAAATCATCAAGCAGGTCGTGTACTTGACACAGTAGACCCAAAGTTGCAACTGGGTTACTATGTTGAAAAAGAGATGGAATTGGTTCTGCAACTGGGTTTGCTTTGCTCTCACTTCAAACCAGAAGCTAGACCTACCATGAGACAAGTAGTACGATATCTCAATAGCGATGAGCCACTTCCTCATGTTGATAACTGGGACCTCATTGAATCTGAAAGAGTCGGTGAAATAAACTCGAGATTAATGCAGGGTATTTATTCTGATCCGATCATATCATCGTCCTTTGGTGGCATTTCTTCAGGTTCCATGGCATATGGCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009646 GO:0009889 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

681

Amino Acids

75.05

Weight (kDa)

5.77

Isoelectric Point (pI)

34.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	23 - 269	1.4e-72	Legume lectin domain
Pkinase	PF00069	358 - 626	2.8e-48	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	360 - 628	1e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016057)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53200 AT3G53200
fragaria_vesca	FvH4_6g16660
malus_domestica	MD12G1108400.v1.1
prunus_persica	Prupe.7G126800_v2.0.a1
pyrus_communis	pycom04g08500 pycom12g10860
rosa_chinensis	RchiOBHm_Chr3g0470621
rosa_laevigata	RLG00000024253
rosa_multiflora	Rmu_sc0002115.1_g000020
rosa_roxburghii	Rroxscaffold_6G00410680
rosa_rugosa	Rorug03G0110600
rosa_samantha	Rh3AG160700 Rh3DG189500
rosa_wichuraiana	Rw3G015190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1727
AccB7I	CCANNNNNTGG	1 cut(s)	1136
AccI	GTMKAC	3 cut(s)	498, 1290, 1758
AccII	CGCG	1 cut(s)	294
AciI	CCGC	5 cut(s)	292, 447, 729, 770, 1098
AclWI	GGATC	3 cut(s)	1053, 1701, 1979
AcoI	YGGCCR	1 cut(s)	355
AcsI	RAATTY	6 cut(s)	223, 369, 422, 457, 615, 1193
AcuI	CTGAAG	2 cut(s)	369, 2004
AfaI	GTAC	7 cut(s)	362, 974, 1040, 1108, 1574, 1746, 1875
AfiI	CCNNNNNNNGG	3 cut(s)	904, 1042, 1136
AflIII	ACRYGT	2 cut(s)	561, 1623
AjiI	CACGTC	1 cut(s)	1624
AjuI	GAANNNNNNNTTGG	2 cut(s)	232, 264
AluBI	AGCT	9 cut(s)	106, 756, 935, 950, 1094, 1215, 1359, 1592, 1850
AluI	AGCT	9 cut(s)	106, 756, 935, 950, 1094, 1215, 1359, 1592, 1850
Alw21I	GWGCWC	2 cut(s)	544, 758
Alw26I	GTCTC	5 cut(s)	327, 701, 989, 1335, 1858
Alw44I	GTGCAC	1 cut(s)	540
AlwI	GGATC	3 cut(s)	1053, 1701, 1979
Ama87I	CYCGRG	3 cut(s)	286, 341, 1957
AoxI	GGCC	9 cut(s)	181, 289, 304, 355, 918, 1507, 1605, 1684, 1707
ApaLI	GTGCAC	1 cut(s)	540
ApeKI	GCWGC	2 cut(s)	1055, 1199
ApoI	RAATTY	6 cut(s)	223, 369, 422, 457, 615, 1193
AseI	ATTAAT	1 cut(s)	1964
Asp700I	GAANNNNTTC	2 cut(s)	810, 1806
AspS9I	GGNCC	3 cut(s)	289, 1708, 1921
AsuC2I	CCSGG	4 cut(s)	287, 288, 342, 343
AsuHPI	GGTGA	4 cut(s)	151, 584, 1729, 1958
AvaI	CYCGRG	3 cut(s)	286, 341, 1957
AvaII	GGWCC	1 cut(s)	1921
AxyI	CCTNAGG	1 cut(s)	1396
BaeGI	GKGCMC	1 cut(s)	544
BanII	GRGCYC	1 cut(s)	758
BarI	GAAGNNNNNNTAC	2 cut(s)	1303, 1335
BbsI	GAAGAC	2 cut(s)	985, 1675
Bbv12I	GWGCWC	2 cut(s)	544, 758
BbvCI	CCTCAGC	1 cut(s)	1609
BbvI	GCAGC	2 cut(s)	1067, 1211
BccI	CCATC	6 cut(s)	458, 596, 1138, 1341, 1714, 1792
BceAI	ACGGC	2 cut(s)	973, 1651
BcgI	CGANNNNNNTGC	2 cut(s)	1948, 1982
BciVI	GTATCC	2 cut(s)	246, 292
BclI	TGATCA	2 cut(s)	150, 1525
BcnI	CCSGG	4 cut(s)	287, 288, 342, 343
BcoDI	GTCTC	5 cut(s)	327, 701, 989, 1335, 1858
BfaI	CTAG	3 cut(s)	308, 1286, 1851
BfmI	CTRYAG	2 cut(s)	417, 504
BfuAI	ACCTGC	1 cut(s)	1727
BfuI	GTATCC	2 cut(s)	246, 292
BglI	GCCNNNNNGGC	1 cut(s)	297
BisI	GCNGC	4 cut(s)	292, 771, 1056, 1200
BlsI	GCNGC	4 cut(s)	293, 772, 1057, 1201
BmcAI	AGTACT	1 cut(s)	362
Bme1390I	CCNGG	4 cut(s)	287, 288, 342, 343
Bme18I	GGWCC	1 cut(s)	1921
BmeT110I	CYCGRG	3 cut(s)	286, 341, 1957
BmgBI	CACGTC	1 cut(s)	1624
BmgT120I	GGNCC	3 cut(s)	289, 1708, 1921
BmiI	GGNNCC	5 cut(s)	909, 1034, 1178, 1922, 2026
BmrFI	CCNGG	4 cut(s)	287, 288, 342, 343
BmrI	ACTGGG	3 cut(s)	1784, 1826, 1927
BmsI	GCATC	5 cut(s)	518, 740, 975, 1465, 1622
BmuI	ACTGGG	3 cut(s)	1784, 1826, 1927
BpiI	GAAGAC	2 cut(s)	985, 1675
BpmI	CTGGAG	1 cut(s)	759
Bpu10I	CCTNAGC	2 cut(s)	1609, 1681
BpuEI	CTTGAG	1 cut(s)	42
BpuMI	CCSGG	4 cut(s)	287, 288, 342, 343
BsaJI	CCNNGG	7 cut(s)	285, 286, 340, 341, 342, 1180, 2028
BsaWI	WCCGGW	2 cut(s)	1035, 1582
BsaXI	ACNNNNNCTCC	4 cut(s)	307, 337, 619, 649
Bsc4I	CCNNNNNNNGG	3 cut(s)	904, 1042, 1136
Bse118I	RCCGGY	1 cut(s)	353
Bse1I	ACTGG	9 cut(s)	175, 358, 742, 748, 1458, 1659, 1779, 1821, 1922
Bse21I	CCTNAGG	1 cut(s)	1396
Bse3DI	GCAATG	3 cut(s)	613, 1389, 1575
BseDI	CCNNGG	7 cut(s)	285, 286, 340, 341, 342, 1180, 2028
BseGI	GGATG	4 cut(s)	731, 1145, 1333, 1613
BseLI	CCNNNNNNNGG	3 cut(s)	904, 1042, 1136
BseMI	GCAATG	3 cut(s)	613, 1389, 1575
BseMII	CTCAG	4 cut(s)	1410, 1623, 1632, 1695
BseNI	ACTGG	9 cut(s)	175, 358, 742, 748, 1458, 1659, 1779, 1821, 1922
BseSI	GKGCMC	1 cut(s)	544
BseXI	GCAGC	2 cut(s)	1067, 1211
BseYI	CCCAGC	1 cut(s)	1359
Bsh1236I	CGCG	1 cut(s)	294
BshFI	GGCC	9 cut(s)	183, 291, 306, 357, 920, 1509, 1607, 1686, 1709
BsiHKAI	GWGCWC	2 cut(s)	544, 758
BsiHKCI	CYCGRG	3 cut(s)	286, 341, 1957
BsiSI	CCGG	5 cut(s)	287, 342, 354, 1036, 1583
BslFI	GGGAC	2 cut(s)	1233, 1934
BslI	CCNNNNNNNGG	3 cut(s)	904, 1042, 1136
BsmAI	GTCTC	5 cut(s)	327, 701, 989, 1335, 1858
BsmFI	GGGAC	2 cut(s)	1233, 1934
BsmI	GAATGC	1 cut(s)	1492
BsnI	GGCC	9 cut(s)	183, 291, 306, 357, 920, 1509, 1607, 1686, 1709
BsoBI	CYCGRG	3 cut(s)	286, 341, 1957
Bsp1286I	GDGCHC	2 cut(s)	544, 758
Bsp1407I	TGTACA	1 cut(s)	972
Bsp143I	GATC	8 cut(s)	150, 574, 685, 1045, 1525, 1693, 1984, 1989
Bsp19I	CCATGG	1 cut(s)	2028
BspACI	CCGC	5 cut(s)	292, 447, 729, 770, 1098
BspANI	GGCC	9 cut(s)	183, 291, 306, 357, 920, 1509, 1607, 1686, 1709
BspCNI	CTCAG	4 cut(s)	1409, 1622, 1631, 1694
BspFNI	CGCG	1 cut(s)	294
BspHI	TCATGA	1 cut(s)	1414
BspLI	GGNNCC	5 cut(s)	909, 1034, 1178, 1922, 2026
BspMI	ACCTGC	1 cut(s)	1727
BspPI	GGATC	3 cut(s)	1053, 1701, 1979
BsrDI	GCAATG	3 cut(s)	613, 1389, 1575
BsrFI	RCCGGY	1 cut(s)	353
BsrGI	TGTACA	1 cut(s)	972
BsrI	ACTGG	9 cut(s)	175, 358, 742, 748, 1458, 1659, 1779, 1821, 1922
BssAI	RCCGGY	1 cut(s)	353
BssECI	CCNNGG	7 cut(s)	285, 286, 340, 341, 342, 1180, 2028
BssMI	GATC	8 cut(s)	150, 574, 685, 1045, 1525, 1693, 1984, 1989
BssT1I	CCWWGG	2 cut(s)	1180, 2028
Bst4CI	ACNGT	3 cut(s)	433, 1111, 1756
Bst6I	CTCTTC	4 cut(s)	38, 235, 385, 546
BstAUI	TGTACA	1 cut(s)	972
BstC8I	GCNNGC	4 cut(s)	355, 721, 802, 1096
BstDEI	CTNAG	5 cut(s)	1396, 1496, 1609, 1618, 1681
BstDSI	CCRYGG	1 cut(s)	2028
BstF5I	GGATG	4 cut(s)	731, 1145, 1333, 1613
BstFNI	CGCG	1 cut(s)	294
BstKTI	GATC	8 cut(s)	153, 577, 688, 1048, 1528, 1696, 1987, 1992
BstMAI	GTCTC	5 cut(s)	327, 701, 989, 1335, 1858
BstMBI	GATC	8 cut(s)	150, 574, 685, 1045, 1525, 1693, 1984, 1989
BstMWI	GCNNNNNNNGC	1 cut(s)	297
BstNSI	RCATGY	2 cut(s)	565, 587
BstSCI	CCNGG	4 cut(s)	285, 286, 340, 341
BstSFI	CTRYAG	2 cut(s)	417, 504
BstSLI	GKGCMC	1 cut(s)	544
BstUI	CGCG	1 cut(s)	294
BstV1I	GCAGC	2 cut(s)	1067, 1211
BstV2I	GAAGAC	2 cut(s)	985, 1675
BstX2I	RGATCY	1 cut(s)	1045
BstXI	CCANNNNNNTGG	1 cut(s)	1555
BstYI	RGATCY	1 cut(s)	1045
Bsu36I	CCTNAGG	1 cut(s)	1396
BsuI	GTATCC	2 cut(s)	246, 292
BsuRI	GGCC	9 cut(s)	183, 291, 306, 357, 920, 1509, 1607, 1686, 1709
BtgI	CCRYGG	1 cut(s)	2028
BtgZI	GCGATG	1 cut(s)	1905
BtrI	CACGTC	1 cut(s)	1624
BtsCI	GGATG	4 cut(s)	731, 1145, 1333, 1613
BtsI	GCAGTG	1 cut(s)	792
BtsIMutI	CAGTG	3 cut(s)	735, 792, 1666
BveI	ACCTGC	1 cut(s)	1727
Cac8I	GCNNGC	4 cut(s)	355, 721, 802, 1096
CciI	TCATGA	1 cut(s)	1414
Cfr10I	RCCGGY	1 cut(s)	353
Cfr13I	GGNCC	3 cut(s)	289, 1708, 1921
Cfr9I	CCCGGG	2 cut(s)	286, 341
CseI	GACGC	1 cut(s)	484
Csp6I	GTAC	7 cut(s)	361, 973, 1039, 1107, 1573, 1745, 1874
CviQI	GTAC	7 cut(s)	361, 973, 1039, 1107, 1573, 1745, 1874
DdeI	CTNAG	5 cut(s)	1396, 1496, 1609, 1618, 1681
DpnI	GATC	8 cut(s)	152, 576, 687, 1047, 1527, 1695, 1986, 1991
DpnII	GATC	8 cut(s)	150, 574, 685, 1045, 1525, 1693, 1984, 1989
DraI	TTTAAA	1 cut(s)	1072
EaeI	YGGCCR	1 cut(s)	355
Eam1104I	CTCTTC	4 cut(s)	38, 235, 385, 546
EarI	CTCTTC	4 cut(s)	38, 235, 385, 546
EciI	GGCGGA	1 cut(s)	1113
Ecl136II	GAGCTC	1 cut(s)	756
Eco130I	CCWWGG	2 cut(s)	1180, 2028
Eco147I	AGGCCT	1 cut(s)	1607
Eco24I	GRGCYC	1 cut(s)	758
Eco32I	GATATC	1 cut(s)	1880
Eco47I	GGWCC	1 cut(s)	1921
Eco53kI	GAGCTC	1 cut(s)	756
Eco57I	CTGAAG	2 cut(s)	369, 2004
Eco81I	CCTNAGG	1 cut(s)	1396
Eco88I	CYCGRG	3 cut(s)	286, 341, 1957
EcoICRI	GAGCTC	1 cut(s)	756
EcoO109I	RGGNCCY	1 cut(s)	1921
EcoRI	GAATTC	3 cut(s)	422, 457, 1193
EcoRV	GATATC	1 cut(s)	1880
EcoT14I	CCWWGG	2 cut(s)	1180, 2028
EcoT38I	GRGCYC	1 cut(s)	758
ErhI	CCWWGG	2 cut(s)	1180, 2028
FalI	AAGNNNNNCTT	2 cut(s)	1109, 1141
FaqI	GGGAC	2 cut(s)	1233, 1934
FauNDI	CATATG	1 cut(s)	2035
FbaI	TGATCA	2 cut(s)	150, 1525
FblI	GTMKAC	3 cut(s)	498, 1290, 1758
Fnu4HI	GCNGC	4 cut(s)	292, 771, 1056, 1200
FokI	GGATG	4 cut(s)	718, 1152, 1320, 1600
FriOI	GRGCYC	1 cut(s)	758
Fsp4HI	GCNGC	4 cut(s)	292, 771, 1056, 1200
FspBI	CTAG	3 cut(s)	308, 1286, 1851
GluI	GCNGC	4 cut(s)	292, 771, 1056, 1200
GsaI	CCCAGC	1 cut(s)	1363
GsuI	CTGGAG	1 cut(s)	759
HaeIII	GGCC	9 cut(s)	183, 291, 306, 357, 920, 1509, 1607, 1686, 1709
HapII	CCGG	5 cut(s)	287, 342, 354, 1036, 1583
HgaI	GACGC	1 cut(s)	484
HpaII	CCGG	5 cut(s)	287, 342, 354, 1036, 1583
HphI	GGTGA	4 cut(s)	151, 584, 1729, 1958
Hpy166II	GTNNAC	8 cut(s)	499, 542, 559, 973, 1114, 1291, 1745, 1759
Hpy188III	TCNNGA	7 cut(s)	704, 1001, 1137, 1398, 1415, 1468, 1959
Hpy8I	GTNNAC	8 cut(s)	499, 542, 559, 973, 1114, 1291, 1745, 1759
HpyAV	CCTTC	5 cut(s)	38, 116, 898, 1292, 1597
HpyCH4III	ACNGT	3 cut(s)	433, 1111, 1756
HpyCH4IV	ACGT	1 cut(s)	1623
HpyF10VI	GCNNNNNNNGC	1 cut(s)	297
HpyF3I	CTNAG	5 cut(s)	1396, 1496, 1609, 1618, 1681
HpySE526I	ACGT	1 cut(s)	1623
KroI	GCCGGC	1 cut(s)	353
KroNI	GCCGGC	1 cut(s)	355
Ksp22I	TGATCA	2 cut(s)	150, 1525
Kzo9I	GATC	8 cut(s)	150, 574, 685, 1045, 1525, 1693, 1984, 1989
LmnI	GCTCC	4 cut(s)	913, 1091, 1426, 1650
Lsp1109I	GCAGC	2 cut(s)	1067, 1211
LweI	GCATC	5 cut(s)	518, 740, 975, 1465, 1622
MaeI	CTAG	3 cut(s)	308, 1286, 1851
MaeII	ACGT	1 cut(s)	1623
MaeIII	GTNAC	4 cut(s)	440, 625, 1499, 1778
MalI	GATC	8 cut(s)	152, 576, 687, 1047, 1527, 1695, 1986, 1991
MboI	GATC	8 cut(s)	150, 574, 685, 1045, 1525, 1693, 1984, 1989
MfeI	CAATTG	1 cut(s)	1566
MflI	RGATCY	1 cut(s)	1045
MhlI	GDGCHC	2 cut(s)	544, 758
MlyI	GAGTC	4 cut(s)	150, 991, 1070, 1950
MmeI	TCCRAC	1 cut(s)	972
MroNI	GCCGGC	1 cut(s)	353
MroXI	GAANNNNTTC	2 cut(s)	810, 1806
MseI	TTAA	5 cut(s)	566, 1071, 1155, 1226, 1964
MslI	CAYNNNNRTG	3 cut(s)	209, 1446, 1527
MspA1I	CMGCKG	1 cut(s)	447
MspI	CCGG	5 cut(s)	287, 342, 354, 1036, 1583
MspR9I	CCNGG	4 cut(s)	287, 288, 342, 343
MunI	CAATTG	1 cut(s)	1566
Mva1269I	GAATGC	1 cut(s)	1492
MvnI	CGCG	1 cut(s)	294
MwoI	GCNNNNNNNGC	1 cut(s)	297
NaeI	GCCGGC	1 cut(s)	355
NciI	CCSGG	4 cut(s)	287, 288, 342, 343
NcoI	CCATGG	1 cut(s)	2028
NdeI	CATATG	1 cut(s)	2035
NdeII	GATC	8 cut(s)	150, 574, 685, 1045, 1525, 1693, 1984, 1989
NgoMIV	GCCGGC	1 cut(s)	353
NlaIV	GGNNCC	5 cut(s)	909, 1034, 1178, 1922, 2026
NmeAIII	GCCGAG	1 cut(s)	1471
NmuCI	GTSAC	2 cut(s)	625, 1499
NspI	RCATGY	2 cut(s)	565, 587
PaeR7I	CTCGAG	1 cut(s)	1957
PagI	TCATGA	1 cut(s)	1414
PceI	AGGCCT	1 cut(s)	1607
PciI	ACATGT	1 cut(s)	561
PctI	GAATGC	1 cut(s)	1492
PdiI	GCCGGC	1 cut(s)	355
PdmI	GAANNNNTTC	2 cut(s)	810, 1806
PfeI	GAWTC	7 cut(s)	84, 109, 128, 336, 1371, 1438, 1931
PflFI	GACNNNGTC	1 cut(s)	431
PflMI	CCANNNNNTGG	1 cut(s)	1136
PkrI	GCNGC	4 cut(s)	293, 772, 1057, 1201
PleI	GAGTC	4 cut(s)	150, 991, 1070, 1949
PpsI	GAGTC	4 cut(s)	150, 991, 1070, 1949
PpuMI	RGGWCCY	1 cut(s)	1921
PscI	ACATGT	1 cut(s)	561
PshBI	ATTAAT	1 cut(s)	1964
Psp124BI	GAGCTC	1 cut(s)	758
Psp5II	RGGWCCY	1 cut(s)	1921
PspFI	CCCAGC	1 cut(s)	1359
PspN4I	GGNNCC	5 cut(s)	909, 1034, 1178, 1922, 2026
PspPI	GGNCC	3 cut(s)	289, 1708, 1921
PspPPI	RGGWCCY	1 cut(s)	1921
PsuI	RGATCY	1 cut(s)	1045
PsyI	GACNNNGTC	1 cut(s)	431
RsaI	GTAC	7 cut(s)	362, 974, 1040, 1108, 1574, 1746, 1875
RsaNI	GTAC	7 cut(s)	361, 973, 1039, 1107, 1573, 1745, 1874
RseI	CAYNNNNRTG	3 cut(s)	209, 1446, 1527
SacI	GAGCTC	1 cut(s)	758
SaqAI	TTAA	5 cut(s)	566, 1071, 1155, 1226, 1964
SatI	GCNGC	4 cut(s)	292, 771, 1056, 1200
Sau3AI	GATC	8 cut(s)	150, 574, 685, 1045, 1525, 1693, 1984, 1989
Sau96I	GGNCC	3 cut(s)	289, 1708, 1921
ScaI	AGTACT	1 cut(s)	362
SchI	GAGTC	4 cut(s)	150, 991, 1070, 1950
ScrFI	CCNGG	4 cut(s)	287, 288, 342, 343
SduI	GDGCHC	2 cut(s)	544, 758
SfaNI	GCATC	5 cut(s)	518, 740, 975, 1465, 1622
SfcI	CTRYAG	2 cut(s)	417, 504
Sfr274I	CTCGAG	1 cut(s)	1957
SinI	GGWCC	1 cut(s)	1921
SlaI	CTCGAG	1 cut(s)	1957
SmaI	CCCGGG	2 cut(s)	288, 343
SmiMI	CAYNNNNRTG	3 cut(s)	209, 1446, 1527
SmlI	CTYRAG	2 cut(s)	57, 1957
SmoI	CTYRAG	2 cut(s)	57, 1957
SseBI	AGGCCT	1 cut(s)	1607
SsiI	CCGC	5 cut(s)	292, 447, 729, 770, 1098
SspMI	CTAG	3 cut(s)	308, 1286, 1851
SstI	GAGCTC	1 cut(s)	758
StuI	AGGCCT	1 cut(s)	1607
StyD4I	CCNGG	4 cut(s)	285, 286, 340, 341
StyI	CCWWGG	2 cut(s)	1180, 2028
TaaI	ACNGT	3 cut(s)	433, 1111, 1756
TaiI	ACGT	1 cut(s)	1626
TaqI	TCGA	5 cut(s)	216, 426, 752, 902, 1958
TaqII	GACCGA	1 cut(s)	1289
TatI	WGTACW	3 cut(s)	360, 972, 1744
TauI	GCSGC	2 cut(s)	294, 773
TfiI	GAWTC	7 cut(s)	84, 109, 128, 336, 1371, 1438, 1931
Tru1I	TTAA	5 cut(s)	566, 1071, 1155, 1226, 1964
Tru9I	TTAA	5 cut(s)	566, 1071, 1155, 1226, 1964
TscAI	CASTG	3 cut(s)	742, 792, 1666
TseFI	GTSAC	2 cut(s)	625, 1499
TseI	GCWGC	2 cut(s)	1055, 1199
Tsp45I	GTSAC	2 cut(s)	625, 1499
TspDTI	ATGAA	8 cut(s)	114, 660, 828, 852, 1040, 1403, 1431, 1690
TspGWI	ACGGA	1 cut(s)	1706
TspMI	CCCGGG	2 cut(s)	286, 341
TspRI	CASTG	3 cut(s)	742, 792, 1666
Tth111I	GACNNNGTC	1 cut(s)	431
Van91I	CCANNNNNTGG	1 cut(s)	1136
VneI	GTGCAC	1 cut(s)	540
VpaK11BI	GGWCC	1 cut(s)	1921
VspI	ATTAAT	1 cut(s)	1964
XapI	RAATTY	6 cut(s)	223, 369, 422, 457, 615, 1193
XceI	RCATGY	2 cut(s)	565, 587
XhoI	CTCGAG	1 cut(s)	1957
XmaI	CCCGGG	2 cut(s)	286, 341
XmiI	GTMKAC	3 cut(s)	498, 1290, 1758
XmnI	GAANNNNTTC	2 cut(s)	810, 1806
XspI	CTAG	3 cut(s)	308, 1286, 1851
ZrmI	AGTACT	1 cut(s)	362

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.