Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0005689

Physical Location & Seq

Genomic Coordinates Reverse (-)

10551366 .. 10554040

Gene Structure 2675 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0130300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGCTTGCCTTGCATTCTCCATATTCGCACTTGCTCTGCTCAACTGTGCAGCTATCTTTACACGTGCCAACCTCCCCGGTACGTGGGAGCTCCTCGTCGCCAACGCCGGCATCGCCTCCATGCACACCGCCGTCACCCGCTTCAACACCGTCGTCCTCCTCGACCGCACCAACATCGGCCCCTCCCGCAAAATGCTCCGCAGGGGCCACTGCCGTAACGACCCCAGCGACACCTTTCTGAAGCACGACTGCTACGCTCACTCCGTCCAATTCGACCCCCAGACCAACCAAATCCGCCCCCTCATGATCCTCACCGACACGTGGTGCTCGTCCGGCCAGTTCCTCCCGGACGGCACTCTGCTCCAAACCGGCGGCGACCTTGACGGCCACAGAAAAATCCGCAAGTTCGAACCGTGCGAGGCCGCCGGGTCGTGCGACTGGTTCGAGCTTGATGACGTGGAGTTGACCGACGGCAGGTGGTACGCCACCAACCAGATTCTCCCCGACGGGTCGGTGATTATAGTCGGAGGCAGTGCCGCCAACACGGTGGAGTATTACCCGCCGCGAAACGGCGCCGTCGAGCTGAAGTTTCTCGCTGATGTGAAGGATACTCAGATGGACAACTTGTACCCTTACCTGCATCTCCTCCCTGACGGCCACCTCTTCATCTTCGCCAACAACAAGGCGGTGCTGTACGATCACCAGACCGACAAAGTCGCCAGAGAATATCCACCGTTGGATGGCGGGCCGCGTAACTACCCCTCAGCCGGGTCGTCCGCAATGCTGGCACTCGAAGGTGACTACTCCACCGCCGTCATCGTCGTCTGCGGTGGGGCCCAGTACGGCGCGTTTATCCAGAAGAGCACCGACACTCCCGCGCACGGCAGCTGCGGCCGGATCGTGGCGACTTCGCCCGACCCGGTTTGGGAAATGGAGGACATGCCGTTCGGGCGGATCATGGGGGACATGGTCATGCTTCCTACCGGCGAGGTTTTGGTGATCAACGGAGCTCAAGCTGGGACCCAGGGGTTTGAAATGGCTTCAAACCCGTGTTTGTACCCGCTTCTTTACCGACCCGAGCAGCCAGTCGGGTTGCGGTTCATGACGTTGAACCCGGGAACAGTGCCGAGATTGTACCACTCCACCGCGAACTTGTTACCGGACGGGCGGGTGTTGATTGCGGGAAGTAATCCGCATTACTTCTACAAATTCAAGGCTGAATTTCCCACCGAGTTGCGAATCGAAGCGTTTTCGCCCGAGTATTTGGGTCCGGACCGGGCCAATCTCCGACCCGTGATCGAGGGAGTTCCGGAAACGGTACGTTACGGCGAGCGTTTTGAGGTGCTGGTGTCGGTGCCTCTATCTGTGGTGGGAATTGTGGAGGTTAATTTGGGTAGCGCACCTTTTGCCACGCATTCGTTTTCGCAGGGTCAACGTCTGGTCAAATTGGCCGTTACGCCTTCAGTCCCAGACGGCGGCGCCCGATACAGAATTAGTTGTGTGGCGCCACCGAATGGAATGGTGGCTCCGCCGGGCTATTACATGGCTTTTGCGGTCAATCAAGGCGTGCCAAGTGTCGCTCGTTGGATACATTTGGTGTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0004222 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0008237 GO:0009987 GO:0010467 GO:0012505 GO:0016020 GO:0016021 GO:0016485 GO:0016787 GO:0019538 GO:0030176 GO:0031224 GO:0031227 GO:0031984 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0051604 GO:0070011 GO:0071586 GO:0071704 GO:0080120 GO:0098827 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00900 ko01130 map00900 map01130

Pfam Domains

Protein Families

Abi

Protein Analysis

534

Amino Acids

58.34

Weight (kDa)

5.64

Isoelectric Point (pI)

37.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyoxal_oxid_N	PF07250	41 - 421	1.9e-171	Glyoxal oxidase N-terminus
GO-like_E_set	PF09118	430 - 531	7.1e-28	Galactose oxidase-like, Early set domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005689)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36305 AT2G36305
fragaria_vesca	FvH4_6g18450 FvH4_6g18450 FvH4_6g18450 FvH4_6g18450 FvH4_6g18450 FvH4_6g18450
malus_domestica	MD12G1023600.v1.1 MD14G1020800.v1.1
prunus_persica	Prupe.7G112900_v2.0.a1 Prupe.7G112900_v2.0.a1 Prupe.7G112900_v2.0.a1 Prupe.7G112900_v2.0.a1
pyrus_communis	pycom12g02200 pycom14g02030
rosa_chinensis	RchiOBHm_Chr3g0472981
rosa_laevigata	RLG00000024040
rosa_multiflora	Rmu_sc0002332.1_g000002 Rmu_sc0034753.1_g000001
rosa_roxburghii	Rroxscaffold_6G00408430
rosa_rugosa	Rorug03G0130300 Rorug03G0130400
rosa_samantha	Rh3AG182200 Rh3BG208500 Rh3CG205500 Rh3DG167500
rosa_wichuraiana	Rw3G016100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	465
Acc36I	ACCTGC	2 cut(s)	465, 645
AccB1I	GGYRCC	4 cut(s)	572, 1354, 1478, 1504
AccB7I	CCANNNNNTGG	1 cut(s)	1514
AccII	CGCG	5 cut(s)	565, 751, 848, 878, 1148
AccIII	TCCGGA	2 cut(s)	1270, 1309
AclWI	GGATC	3 cut(s)	301, 905, 962
AcoI	YGGCCR	5 cut(s)	334, 385, 655, 892, 1449
AcsI	RAATTY	2 cut(s)	1208, 1220
AcuI	CTGAAG	3 cut(s)	260, 605, 1446
AcvI	CACGTG	2 cut(s)	65, 321
AcyI	GRCGYC	3 cut(s)	573, 1479, 1505
AdeI	CACNNNGTG	1 cut(s)	324
AfaI	GTAC	8 cut(s)	82, 482, 629, 695, 842, 1058, 1136, 1320
AflIII	ACRYGT	2 cut(s)	62, 318
AgsI	TTSAA	5 cut(s)	145, 1034, 1044, 1111, 1213
AjiI	CACGTC	1 cut(s)	457
AjnI	CCWGG	1 cut(s)	1023
AloI	GAACNNNNNNTCC	2 cut(s)	929, 961
AluBI	AGCT	7 cut(s)	53, 91, 448, 583, 888, 1010, 1016
AluI	AGCT	7 cut(s)	53, 91, 448, 583, 888, 1010, 1016
Alw21I	GWGCWC	4 cut(s)	93, 329, 866, 1012
AlwI	GGATC	3 cut(s)	301, 905, 962
Ama87I	CYCGRG	3 cut(s)	1076, 1114, 1256
Aor13HI	TCCGGA	2 cut(s)	1270, 1309
ApaI	GGGCCC	1 cut(s)	838
ApeKI	GCWGC	4 cut(s)	50, 885, 888, 1081
ApoI	RAATTY	2 cut(s)	1208, 1220
ArsI	GACNNNNNNTTYG	2 cut(s)	929, 961
AspLEI	GCGC	6 cut(s)	575, 848, 880, 1400, 1481, 1507
AspS9I	GGNCC	9 cut(s)	179, 205, 746, 834, 835, 1020, 1268, 1273, 1278
AsuC2I	CCSGG	9 cut(s)	78, 347, 427, 769, 920, 1115, 1116, 1277, 1533
AsuHPI	GGTGA	6 cut(s)	127, 304, 526, 692, 809, 1009
AsuII	TTCGAA	1 cut(s)	408
AvaI	CYCGRG	3 cut(s)	1076, 1114, 1256
AvaII	GGWCC	3 cut(s)	1020, 1268, 1273
BaeGI	GKGCMC	1 cut(s)	838
BanI	GGYRCC	4 cut(s)	572, 1354, 1478, 1504
BanII	GRGCYC	3 cut(s)	93, 838, 1012
BbrPI	CACGTG	2 cut(s)	65, 321
Bbv12I	GWGCWC	4 cut(s)	93, 329, 866, 1012
BbvCI	CCTCAGC	1 cut(s)	763
BbvI	GCAGC	4 cut(s)	62, 875, 897, 1093
BccI	CCATC	2 cut(s)	610, 734
BcgI	CGANNNNNNTGC	2 cut(s)	157, 191
BciT130I	CCWGG	1 cut(s)	1025
BciVI	GTATCC	2 cut(s)	601, 1581
BclI	TGATCA	1 cut(s)	999
BcnI	CCSGG	9 cut(s)	78, 347, 427, 769, 920, 1115, 1116, 1277, 1533
BfoI	RGCGCY	3 cut(s)	576, 1482, 1508
BfuAI	ACCTGC	2 cut(s)	465, 645
BfuI	GTATCC	2 cut(s)	601, 1581
BglI	GCCNNNNNGGC	1 cut(s)	949
Bme18I	GGWCC	3 cut(s)	1020, 1268, 1273
BmeT110I	CYCGRG	3 cut(s)	1076, 1114, 1256
BmgBI	CACGTC	1 cut(s)	457
BmgT120I	GGNCC	9 cut(s)	179, 205, 746, 834, 835, 1020, 1268, 1273, 1278
BmrI	ACTGGG	1 cut(s)	832
BmsI	GCATC	2 cut(s)	120, 649
BmuI	ACTGGG	1 cut(s)	832
Bpu10I	CCTNAGC	1 cut(s)	763
Bpu14I	TTCGAA	1 cut(s)	408
BpuEI	CTTGAG	1 cut(s)	996
BpuMI	CCSGG	9 cut(s)	78, 347, 427, 769, 920, 1115, 1116, 1277, 1533
BsaAI	YACGTR	3 cut(s)	65, 84, 321
BsaHI	GRCGYC	3 cut(s)	573, 1479, 1505
BsaJI	CCNNGG	4 cut(s)	76, 1023, 1024, 1114
BsaWI	WCCGGW	3 cut(s)	1159, 1270, 1309
BsaXI	ACNNNNNCTCC	4 cut(s)	245, 275, 856, 886
Bse118I	RCCGGY	3 cut(s)	107, 368, 983
Bse1I	ACTGG	4 cut(s)	337, 443, 838, 1085
Bse3DI	GCAATG	1 cut(s)	786
BseAI	TCCGGA	2 cut(s)	1270, 1309
BseBI	CCWGG	1 cut(s)	1025
BseDI	CCNNGG	4 cut(s)	76, 1023, 1024, 1114
BseGI	GGATG	1 cut(s)	745
BseMI	GCAATG	1 cut(s)	786
BseMII	CTCAG	2 cut(s)	626, 777
BseNI	ACTGG	4 cut(s)	337, 443, 838, 1085
BseRI	GAGGAG	3 cut(s)	83, 149, 635
BseSI	GKGCMC	1 cut(s)	838
BseX3I	CGGCCG	1 cut(s)	892
BseXI	GCAGC	4 cut(s)	62, 875, 897, 1093
BseYI	CCCAGC	2 cut(s)	224, 1016
BsgI	GTGCAG	1 cut(s)	69
Bsh1236I	CGCG	5 cut(s)	565, 751, 848, 878, 1148
Bsh1285I	CGRYCG	2 cut(s)	166, 895
BshNI	GGYRCC	4 cut(s)	572, 1354, 1478, 1504
BsiEI	CGRYCG	2 cut(s)	166, 895
BsiHKAI	GWGCWC	4 cut(s)	93, 329, 866, 1012
BsiHKCI	CYCGRG	3 cut(s)	1076, 1114, 1256
BslFI	GGGAC	3 cut(s)	977, 1033, 1451
BsmFI	GGGAC	3 cut(s)	977, 1033, 1451
BsmI	GAATGC	2 cut(s)	14, 1414
BsoBI	CYCGRG	3 cut(s)	1076, 1114, 1256
Bsp119I	TTCGAA	1 cut(s)	408
Bsp120I	GGGCCC	1 cut(s)	834
Bsp1286I	GDGCHC	5 cut(s)	93, 329, 838, 866, 1012
Bsp13I	TCCGGA	2 cut(s)	1270, 1309
Bsp143I	GATC	6 cut(s)	306, 697, 897, 954, 999, 1296
BspCNI	CTCAG	2 cut(s)	625, 776
BspEI	TCCGGA	2 cut(s)	1270, 1309
BspFNI	CGCG	5 cut(s)	565, 751, 848, 878, 1148
BspHI	TCATGA	3 cut(s)	303, 1101, 1601
BspMI	ACCTGC	2 cut(s)	465, 645
BspPI	GGATC	3 cut(s)	301, 905, 962
BspQI	GCTCTTC	1 cut(s)	854
BspT104I	TTCGAA	1 cut(s)	408
BspT107I	GGYRCC	4 cut(s)	572, 1354, 1478, 1504
BsrDI	GCAATG	1 cut(s)	786
BsrFI	RCCGGY	3 cut(s)	107, 368, 983
BsrI	ACTGG	4 cut(s)	337, 443, 838, 1085
BssAI	RCCGGY	3 cut(s)	107, 368, 983
BssECI	CCNNGG	4 cut(s)	76, 1023, 1024, 1114
BssMI	GATC	6 cut(s)	306, 697, 897, 954, 999, 1296
BssNI	GRCGYC	3 cut(s)	573, 1479, 1505
Bst2UI	CCWGG	1 cut(s)	1025
Bst4CI	ACNGT	7 cut(s)	47, 151, 414, 547, 735, 1123, 1318
Bst6I	CTCTTC	2 cut(s)	668, 854
BstACI	GRCGYC	3 cut(s)	573, 1479, 1505
BstAPI	GCANNNNNTGC	1 cut(s)	1406
BstBAI	YACGTR	3 cut(s)	65, 84, 321
BstBI	TTCGAA	1 cut(s)	408
BstC8I	GCNNGC	6 cut(s)	7, 109, 746, 786, 1331, 1568
BstDEI	CTNAG	2 cut(s)	612, 763
BstF5I	GGATG	1 cut(s)	745
BstFNI	CGCG	5 cut(s)	565, 751, 848, 878, 1148
BstH2I	RGCGCY	3 cut(s)	576, 1482, 1508
BstHHI	GCGC	6 cut(s)	575, 848, 880, 1400, 1481, 1507
BstKTI	GATC	6 cut(s)	309, 700, 900, 957, 1002, 1299
BstMBI	GATC	6 cut(s)	306, 697, 897, 954, 999, 1296
BstMCI	CGRYCG	2 cut(s)	166, 895
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 113, 186, 333, 785, 891, 949, 1406
BstNI	CCWGG	1 cut(s)	1025
BstNSI	RCATGY	1 cut(s)	943
BstSLI	GKGCMC	1 cut(s)	838
BstUI	CGCG	5 cut(s)	565, 751, 848, 878, 1148
BstV1I	GCAGC	4 cut(s)	62, 875, 897, 1093
BstXI	CCANNNNNNTGG	1 cut(s)	547
BstZI	CGGCCG	1 cut(s)	892
BsuI	GTATCC	2 cut(s)	601, 1581
BtgZI	GCGATG	1 cut(s)	97
BtrI	CACGTC	1 cut(s)	457
BtsCI	GGATG	1 cut(s)	745
BtsI	GCAGTG	2 cut(s)	208, 538
BtsIMutI	CAGTG	3 cut(s)	208, 538, 1128
BveI	ACCTGC	2 cut(s)	465, 645
Cac8I	GCNNGC	6 cut(s)	7, 109, 746, 786, 1331, 1568
CciI	TCATGA	3 cut(s)	303, 1101, 1601
CfoI	GCGC	6 cut(s)	575, 848, 880, 1400, 1481, 1507
Cfr10I	RCCGGY	3 cut(s)	107, 368, 983
Cfr13I	GGNCC	9 cut(s)	179, 205, 746, 834, 835, 1020, 1268, 1273, 1278
Cfr9I	CCCGGG	1 cut(s)	1114
CpoI	CGGWCCG	1 cut(s)	1273
Csp6I	GTAC	8 cut(s)	81, 481, 628, 694, 841, 1057, 1135, 1319
CspI	CGGWCCG	1 cut(s)	1273
CviAII	CATG	9 cut(s)	121, 304, 940, 958, 967, 973, 1102, 1543, 1602
CviQI	GTAC	8 cut(s)	81, 481, 628, 694, 841, 1057, 1135, 1319
DdeI	CTNAG	2 cut(s)	612, 763
DinI	GGCGCC	3 cut(s)	574, 1480, 1506
DpnI	GATC	6 cut(s)	308, 699, 899, 956, 1001, 1298
DpnII	GATC	6 cut(s)	306, 697, 897, 954, 999, 1296
DraIII	CACNNNGTG	1 cut(s)	324
EaeI	YGGCCR	5 cut(s)	334, 385, 655, 892, 1449
EagI	CGGCCG	1 cut(s)	892
Eam1104I	CTCTTC	2 cut(s)	668, 854
EarI	CTCTTC	2 cut(s)	668, 854
EciI	GGCGGA	3 cut(s)	284, 967, 1518
Ecl136II	GAGCTC	2 cut(s)	91, 1010
EclXI	CGGCCG	1 cut(s)	892
Eco24I	GRGCYC	3 cut(s)	93, 838, 1012
Eco47I	GGWCC	3 cut(s)	1020, 1268, 1273
Eco52I	CGGCCG	1 cut(s)	892
Eco53kI	GAGCTC	2 cut(s)	91, 1010
Eco57I	CTGAAG	3 cut(s)	260, 605, 1446
Eco72I	CACGTG	2 cut(s)	65, 321
Eco88I	CYCGRG	3 cut(s)	1076, 1114, 1256
EcoICRI	GAGCTC	2 cut(s)	91, 1010
EcoO109I	RGGNCCY	2 cut(s)	834, 1020
EcoRII	CCWGG	1 cut(s)	1023
EcoT38I	GRGCYC	3 cut(s)	93, 838, 1012
EgeI	GGCGCC	3 cut(s)	574, 1480, 1506
EheI	GGCGCC	3 cut(s)	574, 1480, 1506
FaeI	CATG	9 cut(s)	124, 307, 943, 961, 970, 976, 1105, 1546, 1605
FaqI	GGGAC	3 cut(s)	977, 1033, 1451
FatI	CATG	9 cut(s)	120, 303, 939, 957, 966, 972, 1101, 1542, 1601
FauI	CCCGC	8 cut(s)	146, 194, 567, 737, 883, 1068, 1161, 1174
FbaI	TGATCA	1 cut(s)	999
FokI	GGATG	1 cut(s)	752
FriOI	GRGCYC	3 cut(s)	93, 838, 1012
GlaI	GCGC	6 cut(s)	574, 847, 879, 1399, 1480, 1506
GsaI	CCCAGC	2 cut(s)	228, 1020
HaeII	RGCGCY	3 cut(s)	576, 1482, 1508
HhaI	GCGC	6 cut(s)	575, 848, 880, 1400, 1481, 1507
Hin1I	GRCGYC	3 cut(s)	573, 1479, 1505
Hin1II	CATG	9 cut(s)	124, 307, 943, 961, 970, 976, 1105, 1546, 1605
Hin6I	GCGC	6 cut(s)	573, 846, 878, 1398, 1479, 1505
HinP1I	GCGC	6 cut(s)	573, 846, 878, 1398, 1479, 1505
HincII	GTYRAC	2 cut(s)	465, 1433
HindII	GTYRAC	2 cut(s)	465, 1433
HinfI	GANTC	2 cut(s)	496, 1239
HphI	GGTGA	6 cut(s)	127, 304, 526, 692, 809, 1009
Hpy166II	GTNNAC	2 cut(s)	465, 1433
Hpy188I	TCNGA	4 cut(s)	240, 527, 615, 1289
Hpy188III	TCNNGA	6 cut(s)	304, 856, 1102, 1271, 1310, 1602
Hpy8I	GTNNAC	2 cut(s)	465, 1433
Hpy99I	CGWCG	6 cut(s)	101, 155, 473, 509, 581, 824
HpyAV	CCTTC	3 cut(s)	598, 788, 1470
HpyCH4III	ACNGT	7 cut(s)	47, 151, 414, 547, 735, 1123, 1318
HpyCH4IV	ACGT	7 cut(s)	64, 83, 320, 456, 1106, 1321, 1435
HpyCH4V	TGCA	4 cut(s)	14, 50, 124, 640
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 113, 186, 333, 785, 891, 949, 1406
HpyF3I	CTNAG	2 cut(s)	612, 763
HpySE526I	ACGT	7 cut(s)	64, 83, 320, 456, 1106, 1321, 1435
Hsp92I	GRCGYC	3 cut(s)	573, 1479, 1505
Hsp92II	CATG	9 cut(s)	124, 307, 943, 961, 970, 976, 1105, 1546, 1605
HspAI	GCGC	6 cut(s)	573, 846, 878, 1398, 1479, 1505
KasI	GGCGCC	3 cut(s)	572, 1478, 1504
KflI	GGGWCCC	1 cut(s)	1020
Kpn2I	TCCGGA	2 cut(s)	1270, 1309
KroI	GCCGGC	1 cut(s)	107
KroNI	GCCGGC	1 cut(s)	109
Ksp22I	TGATCA	1 cut(s)	999
Kzo9I	GATC	6 cut(s)	306, 697, 897, 954, 999, 1296
LguI	GCTCTTC	1 cut(s)	854
LmnI	GCTCC	6 cut(s)	88, 96, 201, 366, 1007, 1531
Lsp1109I	GCAGC	4 cut(s)	62, 875, 897, 1093
LweI	GCATC	2 cut(s)	120, 649
MaeII	ACGT	7 cut(s)	64, 83, 320, 456, 1106, 1321, 1435
MaeIII	GTNAC	7 cut(s)	133, 215, 752, 797, 1155, 1322, 1453
MalI	GATC	6 cut(s)	308, 699, 899, 956, 1001, 1298
MboI	GATC	6 cut(s)	306, 697, 897, 954, 999, 1296
MboII	GAAGA	3 cut(s)	655, 661, 871
MhlI	GDGCHC	5 cut(s)	93, 329, 838, 866, 1012
MluCI	AATT	7 cut(s)	269, 1208, 1220, 1374, 1387, 1445, 1491
Mly113I	GGCGCC	3 cut(s)	573, 1479, 1505
MmeI	TCCRAC	4 cut(s)	505, 717, 1312, 1565
MroI	TCCGGA	2 cut(s)	1270, 1309
MroNI	GCCGGC	1 cut(s)	107
MseI	TTAA	1 cut(s)	1386
MslI	CAYNNNNRTG	1 cut(s)	971
MspA1I	CMGCKG	1 cut(s)	888
Mva1269I	GAATGC	2 cut(s)	14, 1414
MvaI	CCWGG	1 cut(s)	1025
MvnI	CGCG	5 cut(s)	565, 751, 848, 878, 1148
MwoI	GCNNNNNNNGC	8 cut(s)	11, 113, 186, 333, 785, 891, 949, 1406
NaeI	GCCGGC	1 cut(s)	109
NarI	GGCGCC	3 cut(s)	573, 1479, 1505
NciI	CCSGG	9 cut(s)	78, 347, 427, 769, 920, 1115, 1116, 1277, 1533
NdeII	GATC	6 cut(s)	306, 697, 897, 954, 999, 1296
NgoMIV	GCCGGC	1 cut(s)	107
NlaIII	CATG	9 cut(s)	124, 307, 943, 961, 970, 976, 1105, 1546, 1605
NmeAIII	GCCGAG	1 cut(s)	1152
NmuCI	GTSAC	2 cut(s)	133, 797
NspI	RCATGY	1 cut(s)	943
NspV	TTCGAA	1 cut(s)	408
PagI	TCATGA	3 cut(s)	303, 1101, 1601
PaqCI	CACCTGC	1 cut(s)	465
PasI	CCCWGGG	1 cut(s)	1024
PciSI	GCTCTTC	1 cut(s)	854
PcsI	WCGNNNNNNNCGW	6 cut(s)	159, 225, 261, 326, 414, 576
PctI	GAATGC	2 cut(s)	14, 1414
PdiI	GCCGGC	1 cut(s)	109
PfeI	GAWTC	2 cut(s)	496, 1239
PflFI	GACNNNGTC	2 cut(s)	713, 968
PflMI	CCANNNNNTGG	1 cut(s)	1514
PfoI	TCCNGGA	1 cut(s)	345
PluTI	GGCGCC	3 cut(s)	576, 1482, 1508
PmaCI	CACGTG	2 cut(s)	65, 321
PmlI	CACGTG	2 cut(s)	65, 321
Ppu21I	YACGTR	3 cut(s)	65, 84, 321
PpuMI	RGGWCCY	1 cut(s)	1020
Psp124BI	GAGCTC	2 cut(s)	93, 1012
Psp5II	RGGWCCY	1 cut(s)	1020
Psp6I	CCWGG	1 cut(s)	1023
PspCI	CACGTG	2 cut(s)	65, 321
PspFI	CCCAGC	2 cut(s)	224, 1016
PspGI	CCWGG	1 cut(s)	1023
PspOMI	GGGCCC	1 cut(s)	834
PspPI	GGNCC	9 cut(s)	179, 205, 746, 834, 835, 1020, 1268, 1273, 1278
PspPPI	RGGWCCY	1 cut(s)	1020
PsyI	GACNNNGTC	2 cut(s)	713, 968
PvuII	CAGCTG	1 cut(s)	888
RsaI	GTAC	8 cut(s)	82, 482, 629, 695, 842, 1058, 1136, 1320
RsaNI	GTAC	8 cut(s)	81, 481, 628, 694, 841, 1057, 1135, 1319
RseI	CAYNNNNRTG	1 cut(s)	971
Rsr2I	CGGWCCG	1 cut(s)	1273
RsrII	CGGWCCG	1 cut(s)	1273
SacI	GAGCTC	2 cut(s)	93, 1012
SapI	GCTCTTC	1 cut(s)	854
SaqAI	TTAA	1 cut(s)	1386
Sau3AI	GATC	6 cut(s)	306, 697, 897, 954, 999, 1296
Sau96I	GGNCC	9 cut(s)	179, 205, 746, 834, 835, 1020, 1268, 1273, 1278
SduI	GDGCHC	5 cut(s)	93, 329, 838, 866, 1012
SfaNI	GCATC	2 cut(s)	120, 649
SfoI	GGCGCC	3 cut(s)	574, 1480, 1506
SfuI	TTCGAA	1 cut(s)	408
SinI	GGWCC	3 cut(s)	1020, 1268, 1273
SmaI	CCCGGG	1 cut(s)	1116
SmiMI	CAYNNNNRTG	1 cut(s)	971
SmlI	CTYRAG	1 cut(s)	1011
SmoI	CTYRAG	1 cut(s)	1011
Sse9I	AATT	7 cut(s)	269, 1208, 1220, 1374, 1387, 1445, 1491
SspDI	GGCGCC	3 cut(s)	572, 1478, 1504
SstI	GAGCTC	2 cut(s)	93, 1012
TaaI	ACNGT	7 cut(s)	47, 151, 414, 547, 735, 1123, 1318
TaiI	ACGT	7 cut(s)	67, 86, 323, 459, 1109, 1324, 1438
TaqI	TCGA	8 cut(s)	162, 273, 408, 444, 579, 792, 1242, 1299
TaqII	GACCGA	2 cut(s)	482, 722
TasI	AATT	7 cut(s)	269, 1208, 1220, 1374, 1387, 1445, 1491
TauI	GCSGC	7 cut(s)	375, 425, 539, 565, 751, 894, 1479
TfiI	GAWTC	2 cut(s)	496, 1239
Tru1I	TTAA	1 cut(s)	1386
Tru9I	TTAA	1 cut(s)	1386
TscAI	CASTG	3 cut(s)	215, 538, 1128
TseFI	GTSAC	2 cut(s)	133, 797
TseI	GCWGC	4 cut(s)	50, 885, 888, 1081
Tsp45I	GTSAC	2 cut(s)	133, 797
TspDTI	ATGAA	2 cut(s)	655, 1090
TspGWI	ACGGA	2 cut(s)	253, 1020
TspMI	CCCGGG	1 cut(s)	1114
TspRI	CASTG	3 cut(s)	215, 538, 1128
Tth111I	GACNNNGTC	2 cut(s)	713, 968
Van91I	CCANNNNNTGG	1 cut(s)	1514
VpaK11BI	GGWCC	3 cut(s)	1020, 1268, 1273
XapI	RAATTY	2 cut(s)	1208, 1220
XceI	RCATGY	1 cut(s)	943
XmaI	CCCGGG	1 cut(s)	1114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.