Rorug03G0143600

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0012638
Physical Location & Seq
Forward (+)
11760969 .. 11766424
5456 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0143600.1

Sequence Viewer

Length: 3030 bp
ATGGCTTCTCCTCCTTCCTCTACTCAAACCCTCGGCGACAGATCTCATTTCAAGCCAACCGTAACTCTCTCCGATTGGTGGTTGGTCAAATCCAAAGAGAACGACGAAAAAAGGAGACTTGCCGTCGCCGGTGTTTCTTCCGCCCCGCAAGAGATTCCCCGGAGAGTGTTTTACTCTGCGCCCATCAGTAAAAAATACGATGTGTTCACTCTAGAGACTACTGATGGAGTGTGCATTATTCTTGATGGGATTATTAACAAGCAGCAGACTATTGCAAATGGGTTTCCTGAGGAGGTAGCCAGGCGTTTTCAATTAGGCTTTTATGCAGGCTGGGAAAAAGGTGTTGCAGAGTTCTTGGGAGGAGACTCTAACACTACTGGTGTTTCTGAAAGAATATCTGATTTGGGTTCAGAAGGAAAAAAGAATTCCAGTCCAACTTCTGTGCATTTTTCTCAAGAAGAAACTCAAATTCCTTATGAGCATATTGGATCAACTTATTTTCAGTGGATTGGTAGTTCAAAGAGTCCAGAAGGCAATCAGAAGAACCCAATGTCCGGATGCTCTATGAAGCTTAAAAGTACTAAGATGCTTCCTTCATCAGATGCCTTTGAGAGTGTAGGAGGAGCATCAGGTGCAGCTGTTCAGTCAAGGGGGGAAATGAACGAATCAGAGAGATGTCCAAGCAATTCTGCACGCAGAGTGACTAGATTTTTTTCGGAGTTTTTAAGGAGCAAATGGACGAACCACCAAATGGTTGACAATGGTTTGAACTCTGAAAAAAAGACAACGGACTCTCTTCTAACAGTATCTGAAACTGTGAACAACTCTCAACAAAATGGTAAATGTGAAGTTGGAGGGAAAGGCGTGAAAAGTTCCAGTCCAACTTCTGTGCATCTTTCTCTAGAGGACGATTCACATGAGCAAGTCTCTTGTGAAGACATGCGTGATGCTGAATTTCCAAAACAGTTGTCTTCGAAGCTGTCCTTGAATAGCTCCATTGATGACTCAAAAATTGATGACTTGGTTAACTATGCCGCTGAGGAGGAAACAGACAGAGAGGATTTTGGATCAACTGGTTTGCAGTGTATTGGGATGCTGAAGACTCTTGAAGAAAATGAGAAGGGCCCAGTATCCGGATGCTTGATCAATCATAATCATACAGAAATTAGTCCTTCAATAGATGTAGGTGTAGTAGCGTCAGGTGTAACCATTCCGTTTGCGGCGCAAATTGATATATCAAATATATATCCGAGAAATTCTGGAGGCAGAGTGTCCGGAGATTTGTCAATAATTACAAGGAGCAAAGGTAAGACGAAGCAAATTGTTGGCAACGGATTGAACTCTGAACAAAATACCATGGACTCTGTACCCGCAGTTGAAACAGTGAGCAATGATTCAACAAATGTGGATTCTGAAGTAGGAGGGAGACATGTGTTTGAATCTTTTCTCTGTTATTGTGAAATGGCTGAAGATGTACTAAATTCTAGTCTAACTCCTGTGCATTTTCCTCACGAAACTCCTAACGAGAAGGTCCATTGTGAAGATAGGCTTGATATTGAATATTCAAAACAGAATTCTACAAACCTGTCCTCAAATAGCACCATTGATGACTCAAAAATTGATGTTCTGATGAACCATGCTGCTGAAGTGGAATTGGACGCAGAGAATATTGGATTAACTGAATTTCAGTCTGTTGGGAGACCACAGGCTCAAGAAGAAAATGAGAAGAATCCAGCATCTGAGCCTGAAGTGGAATTGGATGCGGAGAATATTGGATTCACTGAGTTTCAGTCTGTTGGAAGACCACAGACTCGAGAAGAAAATGAGAAGAATCCAGCATCTGAGCCTGCGTCAGAAGCCCTTGAGATCCTAGATGGAGCAGTCGATGCAAATGCTCAGTCAGGTGGAAAAATGGATATATCAGAGAGATCCCCAAGCAAGTCTGCAGGCAGAGTGTCGCAACTGTTCTCAGGAATTATTAGGAGAAAAGAGAAGAAGAAGCAAACGGTTAGCAATGGATTGAACTCTGAAACAAAGACAATAGATTCTGTTCCAGCAGTTTCTGGCAGTGTGAGCAACCCGTTACAAAGTGATCGTTTTGAAACAGTAGGGAATGGGATGCCCCGTCCTACAAATTCTGAACTTCAAGAACCAGTGGATGTGAATGTGGTAAGGAAACTAGATTTTGATTTTGTAGAAGATGATATGGAGCAGACTTCCAATGCAAAAGAGGGACAGGATTTTGGAAATGTTACAGCTCAAGTTGGAGAAGGAGAAAGTGGTGCTAAAGAAGAAAACAAATCCAGGAACAGAAACATGAGACAAGTAACCGTTGATACACAACAAATTCATTTCATTCCAGAAGTGAACAAGAAAAAAAAGGTGGGGGTGAACAAGAAAAAAAACTCAACTCCTTCCACACTGGAGGTGAAGAAGAAAAAAGATGGAACTCCAGAGGTGATCAAGAGAACGAAGGGATCTTCTTCCACTTTGGAGGTGAGCAAGAAAAAAAAGTTAACCCCTTTGACCCTAGAGGTGAACAACAAAAAAGAGGTATCTCTTTCCATTCCAAAGGTGAACACAAAGAAAAGAAAGGTATCTCCTTCTTTGGACGGAAGCAAGAAAAGAACGTCAAGTCCTTTGACTCTGGAGGTGAACAGTAAAAAAGCAGTATCTCTTTCCACTTCGAAGGTAAACACAAAGAAAAGAAAGGTATCTCCTTCCACATTGGAGGTGAGCAAGGAAAATAAGTCGAGTCCTTCGACTCTGGAGGTGAATGAGAAAAAAGAGGCATCTCTTTCCACTCCGAAGGTGAACACGAAGACGTCTATTATTTCTCCAGAATCTATGAGTGCCGGACGGTCAAGATCAGGGAGACTGCAGCTACCTCCCTTGGAATTCTGGCGCAATCAGTCGGCAGTTTATGACAAGGATCATGGAGTTATTGGGATTCAGGAAGAGCTACCTAGAGTAACAGCGTCAAGAGGCAGTAGATCTGAGCCTCGGAAAAGAAAAGCCAATAGAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

1009

Amino Acids

110.32

Weight (kDa)

5.96

Isoelectric Point (pI)

53.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SANTA PF09133 21 - 113 3e-22 SANTA (SANT Associated)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2828
AccB7I CCANNNNNTGG 1 cut(s) 751
AccIII TCCGGA 3 cut(s) 554, 1133, 1274
AciI CCGC 6 cut(s) 141, 146, 1035, 1220, 1371, 1763
AclWI GGATC 6 cut(s) 496, 1075, 1861, 1923, 2485, 2940
AcuI CTGAAG 5 cut(s) 1118, 1434, 1488, 1665, 1767
AcyI GRCGYC 1 cut(s) 2825
AfaI GTAC 3 cut(s) 580, 1368, 1476
AfiI CCNNNNNNNGG 4 cut(s) 78, 554, 751, 1133
AflIII ACRYGT 1 cut(s) 1429
AhdI GACNNNNNGTC 1 cut(s) 122
AjnI CCWGG 2 cut(s) 299, 2303
AloI GAACNNNNNNTCC 6 cut(s) 499, 531, 536, 568, 2620, 2652
AluBI AGCT 7 cut(s) 571, 638, 979, 993, 2258, 2884, 2962
AluI AGCT 7 cut(s) 571, 638, 979, 993, 2258, 2884, 2962
Alw26I GTCTC 8 cut(s) 109, 209, 357, 931, 1420, 1693, 2314, 2869
AlwI GGATC 6 cut(s) 496, 1075, 1861, 1923, 2485, 2940
AlwNI CAGNNNCTG 4 cut(s) 809, 1739, 1841, 2063
Ama87I CYCGRG 1 cut(s) 1812
Aor13HI TCCGGA 3 cut(s) 554, 1133, 1274
AoxI GGCC 1 cut(s) 1123
ApaI GGGCCC 1 cut(s) 1127
ApeKI GCWGC 4 cut(s) 262, 635, 1640, 2881
ArsI GACNNNNNNTTYG 4 cut(s) 953, 985, 1883, 1915
Asp700I GAANNNNTTC 1 cut(s) 1443
AspLEI GCGC 3 cut(s) 181, 1225, 2907
AspS9I GGNCC 3 cut(s) 1123, 1124, 1531
AsuC2I CCSGG 1 cut(s) 160
AsuII TTCGAA 2 cut(s) 974, 2687
AvaI CYCGRG 1 cut(s) 1812
AvaII GGWCC 1 cut(s) 1531
AxyI CCTNAGG 1 cut(s) 288
BaeGI GKGCMC 1 cut(s) 1127
BanII GRGCYC 1 cut(s) 1127
BbsI GAAGAC 5 cut(s) 942, 963, 1106, 1807, 2828
BbvCI CCTCAGC 1 cut(s) 1038
BbvI GCAGC 4 cut(s) 274, 647, 1627, 2893
BccI CCATC 5 cut(s) 191, 218, 239, 1868, 2438
BceAI ACGGC 1 cut(s) 107
BcgI CGANNNNNNTGC 2 cut(s) 1874, 1908
BciT130I CCWGG 2 cut(s) 301, 2305
BciVI GTATCC 1 cut(s) 1141
BclI TGATCA 2 cut(s) 1143, 2460
BcnI CCSGG 1 cut(s) 160
BcoDI GTCTC 8 cut(s) 109, 209, 357, 931, 1420, 1693, 2314, 2869
BfaI CTAG 8 cut(s) 212, 705, 902, 1485, 1871, 2180, 2531, 2967
BfmI CTRYAG 2 cut(s) 1944, 2879
BfuI GTATCC 1 cut(s) 1141
BglII AGATCT 2 cut(s) 41, 2993
BisI GCNGC 6 cut(s) 263, 636, 1035, 1221, 1641, 2882
BlsI GCNGC 6 cut(s) 264, 637, 1036, 1222, 1642, 2883
BmcAI AGTACT 1 cut(s) 580
Bme1390I CCNGG 3 cut(s) 160, 301, 2305
Bme18I GGWCC 1 cut(s) 1531
BmeRI GACNNNNNGTC 1 cut(s) 122
BmeT110I CYCGRG 1 cut(s) 1812
BmgT120I GGNCC 3 cut(s) 1123, 1124, 1531
BmiI GGNNCC 1 cut(s) 1125
BmrFI CCNGG 3 cut(s) 160, 301, 2305
BmrI ACTGGG 1 cut(s) 1121
BmuI ACTGGG 1 cut(s) 1121
BpiI GAAGAC 5 cut(s) 942, 963, 1106, 1807, 2828
BplI GAGNNNNNCTC 2 cut(s) 911, 943
BpmI CTGGAG 6 cut(s) 1281, 2436, 2444, 2669, 2789, 2823
Bpu10I CCTNAGC 1 cut(s) 1038
Bpu14I TTCGAA 2 cut(s) 974, 2687
BpuEI CTTGAG 4 cut(s) 438, 1695, 1883, 2244
BpuMI CCSGG 1 cut(s) 160
BsaHI GRCGYC 1 cut(s) 2825
BsaI GGTCTC 1 cut(s) 1693
BsaJI CCNNGG 5 cut(s) 31, 158, 1356, 2892, 3002
BsaWI WCCGGW 3 cut(s) 554, 1133, 1274
BsaXI ACNNNNNCTCC 4 cut(s) 1254, 1284, 1291, 1321
Bsc4I CCNNNNNNNGG 4 cut(s) 78, 554, 751, 1133
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 7 cut(s) 382, 429, 876, 1078, 1127, 2153, 2427
Bse21I CCTNAGG 1 cut(s) 288
Bse3DI GCAATG 2 cut(s) 1396, 2020
BseAI TCCGGA 3 cut(s) 554, 1133, 1274
BseBI CCWGG 2 cut(s) 301, 2305
BseDI CCNNGG 5 cut(s) 31, 158, 1356, 2892, 3002
BseGI GGATG 6 cut(s) 563, 1098, 1142, 1765, 2124, 2164
BseLI CCNNNNNNNGG 4 cut(s) 78, 554, 751, 1133
BseMI GCAATG 2 cut(s) 1396, 2020
BseMII CTCAG 8 cut(s) 279, 1029, 1731, 1773, 1833, 1910, 1983, 2988
BseNI ACTGG 7 cut(s) 382, 429, 876, 1078, 1127, 2153, 2427
BseRI GAGGAG 4 cut(s) 305, 375, 636, 1055
BseSI GKGCMC 1 cut(s) 1127
BseXI GCAGC 4 cut(s) 274, 647, 1627, 2893
BseYI CCCAGC 1 cut(s) 330
BsgI GTGCAG 2 cut(s) 654, 675
BshFI GGCC 1 cut(s) 1125
BsiHKCI CYCGRG 1 cut(s) 1812
BsiSI CCGG 6 cut(s) 129, 160, 555, 1134, 1275, 2856
BslFI GGGAC 1 cut(s) 2247
BslI CCNNNNNNNGG 4 cut(s) 78, 554, 751, 1133
BsmAI GTCTC 8 cut(s) 109, 209, 357, 931, 1420, 1693, 2314, 2869
BsmFI GGGAC 1 cut(s) 2247
BsnI GGCC 1 cut(s) 1125
Bso31I GGTCTC 1 cut(s) 1693
BsoBI CYCGRG 1 cut(s) 1812
Bsp119I TTCGAA 2 cut(s) 974, 2687
Bsp120I GGGCCC 1 cut(s) 1123
Bsp1286I GDGCHC 1 cut(s) 1127
Bsp13I TCCGGA 3 cut(s) 554, 1133, 1274
Bsp19I CCATGG 1 cut(s) 1356
BspACI CCGC 6 cut(s) 141, 146, 1035, 1220, 1371, 1763
BspANI GGCC 1 cut(s) 1125
BspCNI CTCAG 8 cut(s) 280, 1030, 1732, 1774, 1834, 1909, 1982, 2989
BspEI TCCGGA 3 cut(s) 554, 1133, 1274
BspLI GGNNCC 1 cut(s) 1125
BspMAI CTGCAG 2 cut(s) 1948, 2883
BspPI GGATC 6 cut(s) 496, 1075, 1861, 1923, 2485, 2940
BspQI GCTCTTC 1 cut(s) 2952
BspT104I TTCGAA 2 cut(s) 974, 2687
BspTNI GGTCTC 1 cut(s) 1693
BsrDI GCAATG 2 cut(s) 1396, 2020
BsrFI RCCGGY 1 cut(s) 128
BsrI ACTGG 7 cut(s) 382, 429, 876, 1078, 1127, 2153, 2427
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 5 cut(s) 31, 158, 1356, 2892, 3002
BssNI GRCGYC 1 cut(s) 2825
BssT1I CCWWGG 2 cut(s) 1356, 2892
Bst2UI CCWGG 2 cut(s) 301, 2305
Bst6I CTCTTC 2 cut(s) 801, 2952
BstACI GRCGYC 1 cut(s) 2825
BstAPI GCANNNNNTGC 2 cut(s) 632, 1886
BstBI TTCGAA 2 cut(s) 974, 2687
BstC8I GCNNGC 4 cut(s) 328, 694, 1848, 1948
BstDEI CTNAG 9 cut(s) 288, 582, 1038, 1740, 1782, 1842, 1896, 1969, 2997
BstDSI CCRYGG 1 cut(s) 1356
BstF5I GGATG 6 cut(s) 563, 1098, 1142, 1765, 2124, 2164
BstHHI GCGC 3 cut(s) 181, 1225, 2907
BstMAI GTCTC 8 cut(s) 109, 209, 357, 931, 1420, 1693, 2314, 2869
BstMWI GCNNNNNNNGC 4 cut(s) 632, 1856, 1886, 2073
BstNI CCWGG 2 cut(s) 301, 2305
BstNSI RCATGY 2 cut(s) 943, 1433
BstSCI CCNGG 3 cut(s) 158, 299, 2303
BstSFI CTRYAG 2 cut(s) 1944, 2879
BstSLI GKGCMC 1 cut(s) 1127
BstV1I GCAGC 4 cut(s) 274, 647, 1627, 2893
BstV2I GAAGAC 5 cut(s) 942, 963, 1106, 1807, 2828
BstX2I RGATCY 5 cut(s) 41, 1866, 1928, 2477, 2993
BstYI RGATCY 5 cut(s) 41, 1866, 1928, 2477, 2993
Bsu36I CCTNAGG 1 cut(s) 288
BsuI GTATCC 1 cut(s) 1141
BsuRI GGCC 1 cut(s) 1125
BtgI CCRYGG 1 cut(s) 1356
BtsCI GGATG 6 cut(s) 563, 1098, 1142, 1765, 2124, 2164
BtsI GCAGTG 2 cut(s) 1088, 2074
BtsIMutI CAGTG 7 cut(s) 509, 1088, 1389, 1779, 2074, 2160, 2420
Cac8I GCNNGC 4 cut(s) 328, 694, 1848, 1948
CaiI CAGNNNCTG 4 cut(s) 809, 1739, 1841, 2063
CfoI GCGC 3 cut(s) 181, 1225, 2907
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 3 cut(s) 1123, 1124, 1531
CseI GACGC 4 cut(s) 1185, 1667, 1839, 2967
Csp6I GTAC 3 cut(s) 579, 1367, 1475
CspCI CAANNNNNGTGG 2 cut(s) 1386, 1421
CviAII CATG 7 cut(s) 917, 940, 1357, 1430, 1637, 2317, 2936
CviQI GTAC 3 cut(s) 579, 1367, 1475
DdeI CTNAG 9 cut(s) 288, 582, 1038, 1740, 1782, 1842, 1896, 1969, 2997
DriI GACNNNNNGTC 1 cut(s) 122
Eam1104I CTCTTC 2 cut(s) 801, 2952
Eam1105I GACNNNNNGTC 1 cut(s) 122
EarI CTCTTC 2 cut(s) 801, 2952
EciI GGCGGA 1 cut(s) 130
Eco130I CCWWGG 2 cut(s) 1356, 2892
Eco24I GRGCYC 1 cut(s) 1127
Eco31I GGTCTC 1 cut(s) 1693
Eco47I GGWCC 1 cut(s) 1531
Eco57I CTGAAG 5 cut(s) 1118, 1434, 1488, 1665, 1767
Eco81I CCTNAGG 1 cut(s) 288
Eco88I CYCGRG 1 cut(s) 1812
EcoO109I RGGNCCY 1 cut(s) 1123
EcoRI GAATTC 3 cut(s) 424, 1573, 2897
EcoRII CCWGG 2 cut(s) 299, 2303
EcoT14I CCWWGG 2 cut(s) 1356, 2892
EcoT38I GRGCYC 1 cut(s) 1127
ErhI CCWWGG 2 cut(s) 1356, 2892
FaeI CATG 7 cut(s) 920, 943, 1360, 1433, 1640, 2320, 2939
FalI AAGNNNNNCTT 4 cut(s) 968, 1000, 1533, 1565
FaqI GGGAC 1 cut(s) 2247
FatI CATG 7 cut(s) 916, 939, 1356, 1429, 1636, 2316, 2935
FauI CCCGC 2 cut(s) 153, 1378
FbaI TGATCA 2 cut(s) 1143, 2460
Fnu4HI GCNGC 6 cut(s) 263, 636, 1035, 1221, 1641, 2882
FokI GGATG 6 cut(s) 570, 1105, 1149, 1772, 2131, 2171
FriOI GRGCYC 1 cut(s) 1127
Fsp4HI GCNGC 6 cut(s) 263, 636, 1035, 1221, 1641, 2882
FspBI CTAG 8 cut(s) 212, 705, 902, 1485, 1871, 2180, 2531, 2967
GlaI GCGC 3 cut(s) 180, 1224, 2906
GluI GCNGC 6 cut(s) 263, 636, 1035, 1221, 1641, 2882
GsaI CCCAGC 1 cut(s) 334
GsuI CTGGAG 6 cut(s) 1281, 2436, 2444, 2669, 2789, 2823
HaeIII GGCC 1 cut(s) 1125
HapII CCGG 6 cut(s) 129, 160, 555, 1134, 1275, 2856
HgaI GACGC 4 cut(s) 1185, 1667, 1839, 2967
HhaI GCGC 3 cut(s) 181, 1225, 2907
Hin1I GRCGYC 1 cut(s) 2825
Hin1II CATG 7 cut(s) 920, 943, 1360, 1433, 1640, 2320, 2939
Hin6I GCGC 3 cut(s) 179, 1223, 2905
HinP1I GCGC 3 cut(s) 179, 1223, 2905
HincII GTYRAC 3 cut(s) 757, 1027, 2517
HindII GTYRAC 3 cut(s) 757, 1027, 2517
HindIII AAGCTT 1 cut(s) 569
HpaI GTTAAC 2 cut(s) 1027, 2517
HpaII CCGG 6 cut(s) 129, 160, 555, 1134, 1275, 2856
Hpy99I CGWCG 2 cut(s) 107, 128
HpyCH4IV ACGT 2 cut(s) 2630, 2825
HpyF10VI GCNNNNNNNGC 4 cut(s) 632, 1856, 1886, 2073
HpyF3I CTNAG 9 cut(s) 288, 582, 1038, 1740, 1782, 1842, 1896, 1969, 2997
HpySE526I ACGT 2 cut(s) 2630, 2825
Hsp92I GRCGYC 1 cut(s) 2825
Hsp92II CATG 7 cut(s) 920, 943, 1360, 1433, 1640, 2320, 2939
HspAI GCGC 3 cut(s) 179, 1223, 2905
Kpn2I TCCGGA 3 cut(s) 554, 1133, 1274
Ksp22I TGATCA 2 cut(s) 1143, 2460
KspAI GTTAAC 2 cut(s) 1027, 2517
LguI GCTCTTC 1 cut(s) 2952
LmnI GCTCC 6 cut(s) 623, 729, 998, 1299, 1877, 2209
Lsp1109I GCAGC 4 cut(s) 274, 647, 1627, 2893
MaeI CTAG 8 cut(s) 212, 705, 902, 1485, 1871, 2180, 2531, 2967
MaeII ACGT 2 cut(s) 2630, 2825
MaeIII GTNAC 7 cut(s) 61, 700, 1204, 2082, 2251, 2326, 2971
MflI RGATCY 5 cut(s) 41, 1866, 1928, 2477, 2993
MhlI GDGCHC 1 cut(s) 1127
MmeI TCCRAC 5 cut(s) 458, 832, 905, 1777, 2245
MroI TCCGGA 3 cut(s) 554, 1133, 1274
MroXI GAANNNNTTC 1 cut(s) 1443
MseI TTAA 6 cut(s) 255, 573, 725, 1026, 1676, 2516
MspA1I CMGCKG 2 cut(s) 638, 1037
MspI CCGG 6 cut(s) 129, 160, 555, 1134, 1275, 2856
MspR9I CCNGG 3 cut(s) 160, 301, 2305
MvaI CCWGG 2 cut(s) 301, 2305
MwoI GCNNNNNNNGC 4 cut(s) 632, 1856, 1886, 2073
NciI CCSGG 1 cut(s) 160
NcoI CCATGG 1 cut(s) 1356
NlaIII CATG 7 cut(s) 920, 943, 1360, 1433, 1640, 2320, 2939
NlaIV GGNNCC 1 cut(s) 1125
NmeAIII GCCGAG 1 cut(s) 12
NmuCI GTSAC 1 cut(s) 700
NspI RCATGY 2 cut(s) 943, 1433
NspV TTCGAA 2 cut(s) 974, 2687
PaeR7I CTCGAG 1 cut(s) 1812
PciI ACATGT 1 cut(s) 1429
PciSI GCTCTTC 1 cut(s) 2952
PcsI WCGNNNNNNNCGW 1 cut(s) 2759
PdmI GAANNNNTTC 1 cut(s) 1443
PflMI CCANNNNNTGG 1 cut(s) 751
PfoI TCCNGGA 1 cut(s) 2303
PkrI GCNGC 6 cut(s) 264, 637, 1036, 1222, 1642, 2883
PscI ACATGT 1 cut(s) 1429
Psp6I CCWGG 2 cut(s) 299, 2303
PspFI CCCAGC 1 cut(s) 330
PspGI CCWGG 2 cut(s) 299, 2303
PspN4I GGNNCC 1 cut(s) 1125
PspOMI GGGCCC 1 cut(s) 1123
PspPI GGNCC 3 cut(s) 1123, 1124, 1531
PstI CTGCAG 2 cut(s) 1948, 2883
PstNI CAGNNNCTG 4 cut(s) 809, 1739, 1841, 2063
PsuI RGATCY 5 cut(s) 41, 1866, 1928, 2477, 2993
PvuII CAGCTG 1 cut(s) 638
RsaI GTAC 3 cut(s) 580, 1368, 1476
RsaNI GTAC 3 cut(s) 579, 1367, 1475
SapI GCTCTTC 1 cut(s) 2952
SaqAI TTAA 6 cut(s) 255, 573, 725, 1026, 1676, 2516
SatI GCNGC 6 cut(s) 263, 636, 1035, 1221, 1641, 2882
Sau96I GGNCC 3 cut(s) 1123, 1124, 1531
ScaI AGTACT 1 cut(s) 580
ScrFI CCNGG 3 cut(s) 160, 301, 2305
SduI GDGCHC 1 cut(s) 1127
SfcI CTRYAG 2 cut(s) 1944, 2879
Sfr274I CTCGAG 1 cut(s) 1812
SfuI TTCGAA 2 cut(s) 974, 2687
SgrAI CRCCGGYG 1 cut(s) 128
SinI GGWCC 1 cut(s) 1531
SlaI CTCGAG 1 cut(s) 1812
SmlI CTYRAG 5 cut(s) 453, 1710, 1812, 1862, 2259
SmoI CTYRAG 5 cut(s) 453, 1710, 1812, 1862, 2259
SsiI CCGC 6 cut(s) 141, 146, 1035, 1220, 1371, 1763
SspI AATATT 3 cut(s) 1562, 1669, 1771
SspMI CTAG 8 cut(s) 212, 705, 902, 1485, 1871, 2180, 2531, 2967
StyD4I CCNGG 3 cut(s) 158, 299, 2303
StyI CCWWGG 2 cut(s) 1356, 2892
TaiI ACGT 2 cut(s) 2633, 2828
TaqI TCGA 6 cut(s) 974, 1813, 1884, 2687, 2753, 2762
TatI WGTACW 2 cut(s) 578, 1474
TauI GCSGC 2 cut(s) 1037, 1223
Tru1I TTAA 6 cut(s) 255, 573, 725, 1026, 1676, 2516
Tru9I TTAA 6 cut(s) 255, 573, 725, 1026, 1676, 2516
TscAI CASTG 7 cut(s) 509, 1088, 1389, 1786, 2074, 2160, 2427
TseFI GTSAC 1 cut(s) 700
TseI GCWGC 4 cut(s) 262, 635, 1640, 2881
Tsp45I GTSAC 1 cut(s) 700
TspDTI ATGAA 6 cut(s) 581, 585, 674, 1646, 2339, 2344
TspGWI ACGGA 4 cut(s) 803, 1203, 1347, 2628
TspRI CASTG 7 cut(s) 509, 1088, 1389, 1786, 2074, 2160, 2427
Van91I CCANNNNNTGG 1 cut(s) 751
VpaK11BI GGWCC 1 cut(s) 1531
XbaI TCTAGA 2 cut(s) 211, 901
XceI RCATGY 2 cut(s) 943, 1433
XhoI CTCGAG 1 cut(s) 1812
XmnI GAANNNNTTC 1 cut(s) 1443
XspI CTAG 8 cut(s) 212, 705, 902, 1485, 1871, 2180, 2531, 2967
ZraI GACGTC 1 cut(s) 2826
ZrmI AGTACT 1 cut(s) 580
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.