Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0005317

Physical Location & Seq

Genomic Coordinates Forward (+)

12665836 .. 12668899

Gene Structure 3064 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0154100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGCTAGATCTCAACCTCAACTTCTACACTCCCGAAATGGAGACCTCCGCCGCGAGCAGCTTCAACTCCTCCTCCAACGACTCCTCCTCCTCCGCCACCCTCAACTTCCTCGACCTCCAAAACGACGTCGCCGCCCCCCCTTACGACGACGACGACGACGCCCATCATCATAACTACTTCGACGGCCGCACCATCCAGCTCTTCCCTCCTCAACCCCAGCCCCCACGGTCTTCGACGACCAAGCAGTGGCTGGGGCTCTCCTCCGGCGGAGCACCGCAGCGTTACTGTGCTCCTCCTCCTCCGCCGCTCGTGGATCAGAGGATCGTGCCTCTCCCGGAGAAGGTCAAGAAGAGCCGCCGGGGACCGAGGTCCCGGAGCTCGCAGTATCGCGGCGTCACGTTTTATCGGAGGACAGGGAGATGGGAATCGCATATTTGGGATAACGGGAAGCAGGTGTACTTGGGTGGATTTGACACTGCGCATTCTGCAGCTAGAGCTTATGATCGAGCTGCGATAAAGTTCCGTGGAATTGAGGCTGATATTAATTTCAATGTTAGTGATTATGATGAGGATATTAAGCAGATGAGTAAATTTACAAAGGAAGAGTTTGTGCATATCCTGCGTCGCCAGAGCACCGGATTCGCCAGAGGAAGCTCGAAATACAGGGGAGTCACGTTGCACAAATGTGGCCGCTGGGAAGCTCGTATGGGCCAGTTGCTGGGCAAGAAGTATATATACCTTGGCCTATTTGATAGCGAGATTGAAGCTGCAAGAGCATATGACCAGGCTGCCATCAAATGCCATGGAAGGGAAGCGGTCACCAACTTTAATCCAAGCTTATATGATGGGGAGATAATAATGGCTGAGGCCAACAATGCAGGCATCGATGATAGTCTTGATCTAAACTTGGGAATTGCTCCCCCCTTGGCTTCTGACTGTCCAAATGAGAACATCAACTTGAGCAGCTTTCCTTTTCAGCTAGGCTGCAATGACATTCCTGTTCACATGACAGCAAGGAATGAGAATTCTGTTCCAGGACTTCCAGCAACTATGAGGACTCAACTGCCTCATGGCTCAATGGTGGCAACTACAGAGCCTCCTCTAATGAGCAGCATGACCTCCAACTTCTTTCCCATCCATATGGAAAGAGCAATGGAGAAGAGTATGGATGCTAACTCCTTCCCTAACTGGGCATGGCAAATGCAAGGCCTTAATGATGGAGCAACTCCAGTGCCACTCTTCTCTGCGGCAGCATCATCAGGATTCCCTTCTTCAACAACAGAATCATCAGCTCCGATCCCTCCACTTCATTTTCCCAACACATCATTTCTCCAGCGCCACTTTTCACCATCGTTCACCAACAAAACACCCCATTTCTATTGCAGGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006355 GO:0008150 GO:0009566 GO:0009567 GO:0009889 GO:0010468 GO:0010556 GO:0016602 GO:0019219 GO:0019222 GO:0019953 GO:0022414 GO:0031323 GO:0031326 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044703 GO:0044798 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051704 GO:0060255 GO:0065007 GO:0080090 GO:0090575 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04612 ko05152 map04612 map05152

Pfam Domains

Protein Families

CBFB_NFYA

Protein Analysis

463

Amino Acids

51.51

Weight (kDa)

6.4

Isoelectric Point (pI)

60.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	128 - 176	7.1e-11	AP2 domain
AP2	PF00847	219 - 269	1.3e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05690 AT3G05690 AT5G06510 AT5G06510 AT5G06510 AT5G06510 AT5G06510 AT5G06510 AT5G06510
fragaria_vesca	FvH4_6g20510
malus_domestica	MD12G1042100.v1.1 MD14G1041300.v1.1
prunus_persica	Prupe.7G093100_v2.0.a1 Prupe.7G093100_v2.0.a1
pyrus_communis	pycom12g03680 pycom14g03510
rosa_chinensis	RchiOBHm_Chr3g0476401
rosa_laevigata	RLG00000023772
rosa_multiflora	Rmu_sc0000114.1_g000002
rosa_roxburghii	Rroxscaffold_6G00405310
rosa_rugosa	Rorug03G0154100 Rorug03G0154100 Rorug03G0154100 Rorug03G0154200
rosa_samantha	Rh3AG205300 Rh3BG236800 Rh3CG231300 Rh3DG231200
rosa_wichuraiana	Rw3G018650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	442
AatII	GACGTC	1 cut(s)	129
Acc16I	TGCGCA	1 cut(s)	480
Acc36I	ACCTGC	1 cut(s)	442
AccB7I	CCANNNNNTGG	2 cut(s)	246, 718
AccBSI	CCGCTC	1 cut(s)	307
AccII	CGCG	2 cut(s)	53, 390
AclWI	GGATC	3 cut(s)	321, 329, 1291
AcoI	YGGCCR	2 cut(s)	184, 688
AcsI	RAATTY	2 cut(s)	590, 1024
AcyI	GRCGYC	3 cut(s)	126, 159, 393
AfaI	GTAC	1 cut(s)	458
AfiI	CCNNNNNNNGG	5 cut(s)	246, 340, 718, 808, 1189
AgsI	TTSAA	4 cut(s)	64, 550, 764, 1275
AjnI	CCWGG	2 cut(s)	783, 1033
AleI	CACNNNNGTG	1 cut(s)	684
Alw21I	GWGCWC	4 cut(s)	274, 292, 380, 635
Alw26I	GTCTC	1 cut(s)	35
AlwI	GGATC	3 cut(s)	321, 329, 1291
AlwNI	CAGNNNCTG	3 cut(s)	250, 718, 1389
AoxI	GGCC	6 cut(s)	184, 688, 709, 742, 867, 1207
ApoI	RAATTY	2 cut(s)	590, 1024
AseI	ATTAAT	1 cut(s)	543
AspLEI	GCGC	2 cut(s)	481, 1338
AspS9I	GGNCC	3 cut(s)	362, 369, 709
AsuC2I	CCSGG	3 cut(s)	335, 359, 373
AsuHPI	GGTGA	3 cut(s)	811, 1338, 1348
AvaII	GGWCC	2 cut(s)	362, 369
BanII	GRGCYC	2 cut(s)	258, 380
BarI	GAAGNNNNNNTAC	4 cut(s)	440, 472, 719, 751
BauI	CACGAG	1 cut(s)	308
BbsI	GAAGAC	1 cut(s)	222
Bbv12I	GWGCWC	4 cut(s)	274, 292, 380, 635
BbvCI	CCTCAGC	1 cut(s)	864
BccI	CCATC	8 cut(s)	171, 200, 414, 800, 839, 1142, 1211, 1357
BceAI	ACGGC	1 cut(s)	199
BcgI	CGANNNNNNTGC	2 cut(s)	622, 656
BciT130I	CCWGG	2 cut(s)	785, 1035
BcnI	CCSGG	3 cut(s)	335, 359, 373
BcoDI	GTCTC	1 cut(s)	35
BfaI	CTAG	3 cut(s)	5, 492, 980
BfmI	CTRYAG	2 cut(s)	486, 1089
BfoI	RGCGCY	1 cut(s)	1339
BfuAI	ACCTGC	1 cut(s)	442
BglII	AGATCT	1 cut(s)	7
Bme1390I	CCNGG	5 cut(s)	335, 359, 373, 785, 1035
Bme18I	GGWCC	2 cut(s)	362, 369
BmgT120I	GGNCC	3 cut(s)	362, 369, 709
BmiI	GGNNCC	2 cut(s)	363, 371
BmrFI	CCNGG	5 cut(s)	335, 359, 373, 785, 1035
BmrI	ACTGGG	1 cut(s)	1198
BmsI	GCATC	3 cut(s)	891, 1159, 1262
BmuI	ACTGGG	1 cut(s)	1198
BoxI	GACNNNNGTC	1 cut(s)	367
BpiI	GAAGAC	1 cut(s)	222
BpmI	CTGGAG	2 cut(s)	1212, 1316
Bpu10I	CCTNAGC	1 cut(s)	864
BpuEI	CTTGAG	1 cut(s)	979
BpuMI	CCSGG	3 cut(s)	335, 359, 373
Bsa29I	ATCGAT	1 cut(s)	885
BsaBI	GATNNNNATC	1 cut(s)	424
BsaHI	GRCGYC	3 cut(s)	126, 159, 393
BsaI	GGTCTC	1 cut(s)	35
BsaJI	CCNNGG	7 cut(s)	224, 358, 365, 523, 739, 802, 924
BsaWI	WCCGGW	1 cut(s)	635
BsaXI	ACNNNNNCTCC	8 cut(s)	56, 68, 71, 86, 98, 101, 1081, 1111
Bsc4I	CCNNNNNNNGG	5 cut(s)	246, 340, 718, 808, 1189
Bse1I	ACTGG	3 cut(s)	712, 1193, 1229
Bse3DI	GCAATG	2 cut(s)	994, 1158
Bse8I	GATNNNNATC	1 cut(s)	424
BseBI	CCWGG	2 cut(s)	785, 1035
BseCI	ATCGAT	1 cut(s)	885
BseDI	CCNNGG	7 cut(s)	224, 358, 365, 523, 739, 802, 924
BseGI	GGATG	3 cut(s)	192, 1134, 1174
BseJI	GATNNNNATC	1 cut(s)	424
BseLI	CCNNNNNNNGG	5 cut(s)	246, 340, 718, 808, 1189
BseMI	GCAATG	2 cut(s)	994, 1158
BseMII	CTCAG	1 cut(s)	855
BseNI	ACTGG	3 cut(s)	712, 1193, 1229
BseX3I	CGGCCG	1 cut(s)	184
BseYI	CCCAGC	4 cut(s)	216, 250, 693, 718
Bsh1236I	CGCG	2 cut(s)	53, 390
Bsh1285I	CGRYCG	1 cut(s)	187
BshFI	GGCC	6 cut(s)	186, 690, 711, 744, 869, 1209
BshVI	ATCGAT	1 cut(s)	885
BsiEI	CGRYCG	1 cut(s)	187
BsiHKAI	GWGCWC	4 cut(s)	274, 292, 380, 635
BsiSI	CCGG	5 cut(s)	264, 335, 358, 373, 636
BslFI	GGGAC	2 cut(s)	355, 375
BslI	CCNNNNNNNGG	5 cut(s)	246, 340, 718, 808, 1189
BsmAI	GTCTC	1 cut(s)	35
BsmFI	GGGAC	2 cut(s)	355, 375
BsmI	GAATGC	1 cut(s)	481
BsnI	GGCC	6 cut(s)	186, 690, 711, 744, 869, 1209
Bso31I	GGTCTC	1 cut(s)	35
Bsp1286I	GDGCHC	5 cut(s)	258, 274, 292, 380, 635
Bsp143I	GATC	6 cut(s)	7, 313, 321, 502, 898, 1296
Bsp19I	CCATGG	1 cut(s)	802
BspANI	GGCC	6 cut(s)	186, 690, 711, 744, 869, 1209
BspCNI	CTCAG	1 cut(s)	856
BspDI	ATCGAT	1 cut(s)	885
BspFNI	CGCG	2 cut(s)	53, 390
BspLI	GGNNCC	2 cut(s)	363, 371
BspMAI	CTGCAG	1 cut(s)	490
BspMI	ACCTGC	1 cut(s)	442
BspPI	GGATC	3 cut(s)	321, 329, 1291
BspQI	GCTCTTC	2 cut(s)	206, 344
BspTNI	GGTCTC	1 cut(s)	35
BsrBI	CCGCTC	1 cut(s)	307
BsrDI	GCAATG	2 cut(s)	994, 1158
BsrI	ACTGG	3 cut(s)	712, 1193, 1229
BssECI	CCNNGG	7 cut(s)	224, 358, 365, 523, 739, 802, 924
BssMI	GATC	6 cut(s)	7, 313, 321, 502, 898, 1296
BssNI	GRCGYC	3 cut(s)	126, 159, 393
BssSI	CACGAG	1 cut(s)	308
BssT1I	CCWWGG	3 cut(s)	739, 802, 924
Bst2BI	CACGAG	1 cut(s)	308
Bst2UI	CCWGG	2 cut(s)	785, 1035
Bst4CI	ACNGT	3 cut(s)	228, 287, 938
Bst6I	CTCTTC	5 cut(s)	206, 344, 597, 1154, 1244
BstACI	GRCGYC	3 cut(s)	126, 159, 393
BstAPI	GCANNNNNTGC	1 cut(s)	619
BstC8I	GCNNGC	3 cut(s)	55, 380, 880
BstDEI	CTNAG	1 cut(s)	864
BstDSI	CCRYGG	3 cut(s)	224, 523, 802
BstEII	GGTNACC	1 cut(s)	817
BstF5I	GGATG	3 cut(s)	192, 1134, 1174
BstFNI	CGCG	2 cut(s)	53, 390
BstH2I	RGCGCY	1 cut(s)	1339
BstHHI	GCGC	2 cut(s)	481, 1338
BstKTI	GATC	6 cut(s)	10, 316, 324, 505, 901, 1299
BstMAI	GTCTC	1 cut(s)	35
BstMBI	GATC	6 cut(s)	7, 313, 321, 502, 898, 1296
BstMCI	CGRYCG	1 cut(s)	187
BstMWI	GCNNNNNNNGC	5 cut(s)	485, 494, 619, 773, 875
BstNI	CCWGG	2 cut(s)	785, 1035
BstPAI	GACNNNNGTC	1 cut(s)	367
BstPI	GGTNACC	1 cut(s)	817
BstSCI	CCNGG	5 cut(s)	333, 357, 371, 783, 1033
BstSFI	CTRYAG	2 cut(s)	486, 1089
BstUI	CGCG	2 cut(s)	53, 390
BstV2I	GAAGAC	1 cut(s)	222
BstX2I	RGATCY	1 cut(s)	7
BstXI	CCANNNNNNTGG	1 cut(s)	1141
BstYI	RGATCY	1 cut(s)	7
BstZI	CGGCCG	1 cut(s)	184
Bsu15I	ATCGAT	1 cut(s)	885
BsuRI	GGCC	6 cut(s)	186, 690, 711, 744, 869, 1209
BsuTUI	ATCGAT	1 cut(s)	885
BtgI	CCRYGG	3 cut(s)	224, 523, 802
BtsCI	GGATG	3 cut(s)	192, 1134, 1174
BtsI	GCAGTG	2 cut(s)	251, 474
BtsIMutI	CAGTG	3 cut(s)	251, 474, 1236
BveI	ACCTGC	1 cut(s)	442
Cac8I	GCNNGC	3 cut(s)	55, 380, 880
CaiI	CAGNNNCTG	3 cut(s)	250, 718, 1389
CfoI	GCGC	2 cut(s)	481, 1338
Cfr13I	GGNCC	3 cut(s)	362, 369, 709
ClaI	ATCGAT	1 cut(s)	885
CseI	GACGC	3 cut(s)	167, 382, 611
Csp6I	GTAC	1 cut(s)	457
CviAII	CATG	5 cut(s)	803, 1006, 1070, 1114, 1194
CviQI	GTAC	1 cut(s)	457
DdeI	CTNAG	1 cut(s)	864
DpnI	GATC	6 cut(s)	9, 315, 323, 504, 900, 1298
DpnII	GATC	6 cut(s)	7, 313, 321, 502, 898, 1296
EaeI	YGGCCR	2 cut(s)	184, 688
EagI	CGGCCG	1 cut(s)	184
Eam1104I	CTCTTC	5 cut(s)	206, 344, 597, 1154, 1244
EarI	CTCTTC	5 cut(s)	206, 344, 597, 1154, 1244
EciI	GGCGGA	4 cut(s)	37, 82, 282, 291
Ecl136II	GAGCTC	1 cut(s)	378
EclXI	CGGCCG	1 cut(s)	184
Eco130I	CCWWGG	3 cut(s)	739, 802, 924
Eco147I	AGGCCT	1 cut(s)	1209
Eco24I	GRGCYC	2 cut(s)	258, 380
Eco31I	GGTCTC	1 cut(s)	35
Eco47I	GGWCC	2 cut(s)	362, 369
Eco52I	CGGCCG	1 cut(s)	184
Eco53kI	GAGCTC	1 cut(s)	378
Eco91I	GGTNACC	1 cut(s)	817
EcoICRI	GAGCTC	1 cut(s)	378
EcoO109I	RGGNCCY	1 cut(s)	369
EcoO65I	GGTNACC	1 cut(s)	817
EcoRI	GAATTC	1 cut(s)	1024
EcoRII	CCWGG	2 cut(s)	783, 1033
EcoT14I	CCWWGG	3 cut(s)	739, 802, 924
EcoT38I	GRGCYC	2 cut(s)	258, 380
ErhI	CCWWGG	3 cut(s)	739, 802, 924
FaeI	CATG	5 cut(s)	806, 1009, 1073, 1117, 1197
FaqI	GGGAC	2 cut(s)	355, 375
FatI	CATG	5 cut(s)	802, 1005, 1069, 1113, 1193
FauNDI	CATATG	2 cut(s)	778, 1140
FokI	GGATG	3 cut(s)	179, 1121, 1181
FriOI	GRGCYC	2 cut(s)	258, 380
FspBI	CTAG	3 cut(s)	5, 492, 980
FspI	TGCGCA	1 cut(s)	480
GlaI	GCGC	2 cut(s)	480, 1337
GsaI	CCCAGC	4 cut(s)	220, 254, 697, 722
GsuI	CTGGAG	2 cut(s)	1212, 1316
HaeII	RGCGCY	1 cut(s)	1339
HaeIII	GGCC	6 cut(s)	186, 690, 711, 744, 869, 1209
HapII	CCGG	5 cut(s)	264, 335, 358, 373, 636
HgaI	GACGC	3 cut(s)	167, 382, 611
HhaI	GCGC	2 cut(s)	481, 1338
Hin1I	GRCGYC	3 cut(s)	126, 159, 393
Hin1II	CATG	5 cut(s)	806, 1009, 1073, 1117, 1197
Hin6I	GCGC	2 cut(s)	479, 1336
HinP1I	GCGC	2 cut(s)	479, 1336
HindIII	AAGCTT	1 cut(s)	835
HinfI	GANTC	7 cut(s)	80, 425, 639, 669, 1057, 1263, 1283
HpaII	CCGG	5 cut(s)	264, 335, 358, 373, 636
HphI	GGTGA	3 cut(s)	811, 1338, 1348
Hpy166II	GTNNAC	3 cut(s)	457, 1003, 1356
Hpy188I	TCNGA	4 cut(s)	318, 408, 934, 1296
Hpy188III	TCNNGA	4 cut(s)	32, 346, 896, 1260
Hpy8I	GTNNAC	3 cut(s)	457, 1003, 1356
HpyAV	CCTTC	4 cut(s)	334, 801, 1189, 1278
HpyCH4III	ACNGT	3 cut(s)	228, 287, 938
HpyCH4IV	ACGT	3 cut(s)	126, 398, 674
HpyCH4V	TGCA	8 cut(s)	488, 613, 679, 770, 878, 987, 1204, 1383
HpyF10VI	GCNNNNNNNGC	5 cut(s)	485, 494, 619, 773, 875
HpyF3I	CTNAG	1 cut(s)	864
HpySE526I	ACGT	3 cut(s)	126, 398, 674
Hsp92I	GRCGYC	3 cut(s)	126, 159, 393
Hsp92II	CATG	5 cut(s)	806, 1009, 1073, 1117, 1197
HspAI	GCGC	2 cut(s)	479, 1336
Kzo9I	GATC	6 cut(s)	7, 313, 321, 502, 898, 1296
LguI	GCTCTTC	2 cut(s)	206, 344
LmnI	GCTCC	7 cut(s)	269, 295, 375, 922, 1220, 1297, 1386
LweI	GCATC	3 cut(s)	891, 1159, 1262
MaeI	CTAG	3 cut(s)	5, 492, 980
MaeII	ACGT	3 cut(s)	126, 398, 674
MaeIII	GTNAC	4 cut(s)	281, 394, 670, 817
MalI	GATC	6 cut(s)	9, 315, 323, 504, 900, 1298
MbiI	CCGCTC	1 cut(s)	307
MboI	GATC	6 cut(s)	7, 313, 321, 502, 898, 1296
MboII	GAAGA	7 cut(s)	193, 222, 361, 614, 1171, 1231, 1263
MflI	RGATCY	1 cut(s)	7
MhlI	GDGCHC	5 cut(s)	258, 274, 292, 380, 635
MluCI	AATT	5 cut(s)	528, 544, 590, 912, 1024
MlyI	GAGTC	3 cut(s)	74, 678, 1051
MmeI	TCCRAC	2 cut(s)	99, 1146
MseI	TTAA	4 cut(s)	543, 576, 828, 1212
MslI	CAYNNNNRTG	2 cut(s)	684, 1139
MspA1I	CMGCKG	1 cut(s)	693
MspI	CCGG	5 cut(s)	264, 335, 358, 373, 636
MspR9I	CCNGG	5 cut(s)	335, 359, 373, 785, 1035
Mva1269I	GAATGC	1 cut(s)	481
MvaI	CCWGG	2 cut(s)	785, 1035
MvnI	CGCG	2 cut(s)	53, 390
MwoI	GCNNNNNNNGC	5 cut(s)	485, 494, 619, 773, 875
NciI	CCSGG	3 cut(s)	335, 359, 373
NcoI	CCATGG	1 cut(s)	802
NdeI	CATATG	2 cut(s)	778, 1140
NdeII	GATC	6 cut(s)	7, 313, 321, 502, 898, 1296
NlaIII	CATG	5 cut(s)	806, 1009, 1073, 1117, 1197
NlaIV	GGNNCC	2 cut(s)	363, 371
NmuCI	GTSAC	3 cut(s)	394, 670, 817
NsbI	TGCGCA	1 cut(s)	480
OliI	CACNNNNGTG	1 cut(s)	684
PaqCI	CACCTGC	1 cut(s)	442
PceI	AGGCCT	1 cut(s)	1209
PciSI	GCTCTTC	2 cut(s)	206, 344
PcsI	WCGNNNNNNNCGW	2 cut(s)	150, 153
PctI	GAATGC	1 cut(s)	481
PfeI	GAWTC	4 cut(s)	425, 639, 1263, 1283
PflMI	CCANNNNNTGG	2 cut(s)	246, 718
PfoI	TCCNGGA	3 cut(s)	333, 371, 1033
PleI	GAGTC	3 cut(s)	74, 677, 1051
PpsI	GAGTC	3 cut(s)	74, 677, 1051
PpuMI	RGGWCCY	1 cut(s)	369
PshAI	GACNNNNGTC	1 cut(s)	367
PshBI	ATTAAT	1 cut(s)	543
Psp124BI	GAGCTC	1 cut(s)	380
Psp5II	RGGWCCY	1 cut(s)	369
Psp6I	CCWGG	2 cut(s)	783, 1033
PspEI	GGTNACC	1 cut(s)	817
PspFI	CCCAGC	4 cut(s)	216, 250, 693, 718
PspGI	CCWGG	2 cut(s)	783, 1033
PspN4I	GGNNCC	2 cut(s)	363, 371
PspPI	GGNCC	3 cut(s)	362, 369, 709
PspPPI	RGGWCCY	1 cut(s)	369
PstI	CTGCAG	1 cut(s)	490
PstNI	CAGNNNCTG	3 cut(s)	250, 718, 1389
PsuI	RGATCY	1 cut(s)	7
RsaI	GTAC	1 cut(s)	458
RsaNI	GTAC	1 cut(s)	457
RseI	CAYNNNNRTG	2 cut(s)	684, 1139
SacI	GAGCTC	1 cut(s)	380
SapI	GCTCTTC	2 cut(s)	206, 344
SaqAI	TTAA	4 cut(s)	543, 576, 828, 1212
Sau3AI	GATC	6 cut(s)	7, 313, 321, 502, 898, 1296
Sau96I	GGNCC	3 cut(s)	362, 369, 709
SchI	GAGTC	3 cut(s)	74, 678, 1051
ScrFI	CCNGG	5 cut(s)	335, 359, 373, 785, 1035
SduI	GDGCHC	5 cut(s)	258, 274, 292, 380, 635
SfaNI	GCATC	3 cut(s)	891, 1159, 1262
SfcI	CTRYAG	2 cut(s)	486, 1089
SinI	GGWCC	2 cut(s)	362, 369
SmiMI	CAYNNNNRTG	2 cut(s)	684, 1139
SmlI	CTYRAG	1 cut(s)	958
SmoI	CTYRAG	1 cut(s)	958
Sse9I	AATT	5 cut(s)	528, 544, 590, 912, 1024
SseBI	AGGCCT	1 cut(s)	1209
SspMI	CTAG	3 cut(s)	5, 492, 980
SstI	GAGCTC	1 cut(s)	380
StuI	AGGCCT	1 cut(s)	1209
StyD4I	CCNGG	5 cut(s)	333, 357, 371, 783, 1033
StyI	CCWWGG	3 cut(s)	739, 802, 924
TaaI	ACNGT	3 cut(s)	228, 287, 938
TaiI	ACGT	3 cut(s)	129, 401, 677
TaqI	TCGA	6 cut(s)	111, 180, 233, 505, 656, 885
TaqII	GACCGA	1 cut(s)	379
TasI	AATT	5 cut(s)	528, 544, 590, 912, 1024
TatI	WGTACW	1 cut(s)	456
TauI	GCSGC	8 cut(s)	53, 134, 189, 307, 357, 393, 693, 1250
TfiI	GAWTC	4 cut(s)	425, 639, 1263, 1283
Tru1I	TTAA	4 cut(s)	543, 576, 828, 1212
Tru9I	TTAA	4 cut(s)	543, 576, 828, 1212
TscAI	CASTG	3 cut(s)	251, 481, 1236
TseFI	GTSAC	3 cut(s)	394, 670, 817
Tsp45I	GTSAC	3 cut(s)	394, 670, 817
TspDTI	ATGAA	1 cut(s)	1298
TspGWI	ACGGA	1 cut(s)	512
TspRI	CASTG	3 cut(s)	251, 481, 1236
Van91I	CCANNNNNTGG	2 cut(s)	246, 718
VpaK11BI	GGWCC	2 cut(s)	362, 369
VspI	ATTAAT	1 cut(s)	543
XapI	RAATTY	2 cut(s)	590, 1024
XcmI	CCANNNNNNNNNTGG	1 cut(s)	247
XspI	CTAG	3 cut(s)	5, 492, 980
ZraI	GACGTC	1 cut(s)	127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.