Rorug03G0173200

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0007223
Physical Location & Seq
Forward (+)
14648618 .. 14651206
2589 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0173200.1

Sequence Viewer

Length: 2589 bp
ATGGATATACCTGTCACTGTAAGCCTTCAAAACCCACCTCTCCCACCCAAACAGTTCCACACCAAAAACCCAACACCAAAAGACTTGAACTTGCTCATAAAGCACCACGCCAACCTCAAAAACGACCATGCAATCCTCTCAACCTATACCCACATGGAGTCTCTTCGACTGGCGCCGGATAACTCCTCTCTCCCTCTAGTTCTCAAGGCCTGTGCGCGGCTGAGCGCCGTCGAGAGAGGGAAGGGGATACATTCGAGTATTCGGAACTCGGGTTTGGATAAAGATGTGAGGATTGGGACTGCCCTTGTTGATTTCTACTGCAAAAGTGGGCTCATTGATGATGCAGTGAAGGTGTTTGATGAAATGCGTGAGAGAGATTTGGTTCTGTGGAATGCTTTGATTCATGGGTGTGTCGGGTGTGGTTGTTATCAACAGGCTATATGCTTGTTTCGGGAGATGCAGAGTGAGGGGTTGAAGCCGAATTCGCGCAGTGTGGTTGCATTGCTTTTGGCTTGTAGGGAGGTTTCGGAGTTGAGATGTGGGAAAGAGATACATGGCTATGGTTTGAGGAATGGATTGCTTGATTTGGATGCTCATGTGGGGACTGCTTTGATTGGGTTTTATATGAGATTTGATGTCAGAATGTCGCATCTTACATTCGATTCGATGGTTGTGAGGAATGTTGTTAGTTCGAATGCAATAATTACAGGGTATGTTGATGTTGGGGAGTACTTGATGGCGGTGAAGCTTTTCGTGCAGTTGCTTGTGGACGGGGTTGAGTTTGACTCTGTTTCGATGTTGGTTGTGATTCAGGCTTGTGCGAAAATTGGATCTGTTGAATTGGCTAGGCAAATTCATCAAATGGCTATAAAGTACAGCTACAGCAGTGATCTTTTCATTGTAAATGCATTGCTGAATATGTATAGTGAGTGTGGACGTATTGAATTATCGCGTGCATTATTTGAAACTGTCCCAAACCGTGATGTAGCTTTGTGGAATTCCATGCTAGCTGCATACAGTGAATATGGTTTTTATGAGGAAGCCATGAACTTATTTTTGAAAATGCAAACAGAAGGAATCGTGGAAGATCAAAGAACTGTTTATATAATGTTGTCATTATGTGAAGAATTATCTGAAGGCTTGATAGAGGGTAAAAGCTTGCATGCTCTTGCATGCAAGAATGGGATGGAAATGGATGTTTCTCTCGGAAATACATTGTTAAGTATGTATGCTGAATTTAACTGTGTGCAGTCTGTTAAGAAGGTTTTTGCTGAGATGAAAGGTTCAGATGTTGTATCATGGAACATTCTGATCAGGGCATTGGCCTGCAATGGATTGCGAGATGAAGCATGGGAAACATTTGGTGTCATGCGAGAATCTGGAACCAAGCCAAACTCACACACCATAATATCTGTCCTTGCTATTTTTGAAGCTGAAACTTGTGTAAATACAGTGCGAGCGATTCATGGTTTTGTAATGAAACATGGTATTGAAGTTGACCTATCTTTGAATACTGCACTAACAGATATATACATGAATAGCAGTGATGAAGCAGCAGCTAGGACTCTATTTGAGAACCGCCCCTGTAGGGATGTGATCTCATGGAATGCTATAATTGCCAGTTACATCCGAAACAATGAAAGCAATGAAGCTCGGTTACTTTTCAACCGTATGATTTCAGAAGTGAAACCCAACTCTGTCACGATCACAAGTATTCTCTCATCATGTACCCAAGTTGCATCTCTGCCTCTAGGTCAATGCTTGCATGCTTATGCAACTAGGAGGCACTTCTCATTTGACTTTGATTTGTCTCTTGCAAATGCTTTTATATCTATGTACGCTAGAAGCGGTAGTATGCAAAATGCTGAAAAGATCTTTAAGAGTTTACCAACGAGAAATGTTATATCATGGAATGCCTTGATAACTGGCTACAGCATGCACGGTCATGTATATGATGCTATTCTTGTGTTCCAACAAATGTTAGAGGATGGTTTCCAACCAAATGGTTCAACTTTTGTAGCTGTACTGTCTGCTTGCAGACATTCTGGTTTGATAGAGATGGGATTGAAGCTTTTCCACACTATGGTACATGATCTGGAGATAACACCCGAGCTTGTTCACTATGGTTGTGTCGTTGACCTTCTTTGTCGTGCAGGCCGCTTAGATGAAGCTAGAGAGTTTATCGAGTCAATGCCTATTGAACCAGATGCATCTGTGTGGAGGGCTTTGCTCAATGGTTGTCGAGTTAATTCTGCGCCTGAGTTAGCTGGAGCAATCTTTGAGAAACTTGTGGAATTAGAACCCATGAATGCAGGGAATTATGTTCTGCTATCTAATATATATGCTGCAGCAGGTCTGTGGTTAGAGGTCAGGAAGATAAGAACATTGCTGAGGGAAAAGGGTTTGAAAAAGCCTCCAGGAACAAGCTGGATTGTTATTAAAAGTCAGGTCCACTCTTTTGTTGCCTCAGACACATCACACCTTCATTCAAACAGAATTTATGCTTGTTTAAATTCTCTGTCAGCCTTAATCAAAGAAATTGGTTATACTCCTGATCTTCAAGGGGTTTTGCATGAAGAAGAGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

862

Amino Acids

95.95

Weight (kDa)

5.91

Isoelectric Point (pI)

37.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 100 - 126 8.7e-06 PPR repeat
PPR_1 PF12854 100 - 123 1.8e-06 PPR repeat
PPR_2 PF13041 126 - 171 2.5e-09 PPR repeat family
PPR PF01535 128 - 158 8.4e-06 PPR repeat
PPR_2 PF13041 226 - 275 2.4e-06 PPR repeat family
PPR_2 PF13041 328 - 374 2.4e-06 PPR repeat family
PPR PF01535 332 - 360 6.8e-06 PPR repeat
PPR_2 PF13041 430 - 469 7.9e-09 PPR repeat family
PPR_2 PF13041 530 - 576 9.4e-09 PPR repeat family
PPR_2 PF13041 632 - 679 5.5e-10 PPR repeat family
PPR PF01535 635 - 665 2.7e-06 PPR repeat
PPR_1 PF12854 701 - 731 2.3e-06 PPR repeat
E_motif PF20431 754 - 811 4.1e-20 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2342
AccB1I GGYRCC 1 cut(s) 172
AccB7I CCANNNNNTGG 1 cut(s) 2083
AccII CGCG 3 cut(s) 217, 487, 952
AciI CCGC 5 cut(s) 217, 740, 1579, 1848, 2158
AclWI GGATC 1 cut(s) 838
AcsI RAATTY 6 cut(s) 481, 852, 997, 1235, 2496, 2512
AcuI CTGAAG 1 cut(s) 1155
AcyI GRCGYC 1 cut(s) 173
AfaI GTAC 6 cut(s) 731, 875, 1729, 1838, 2025, 2088
AfiI CCNNNNNNNGG 3 cut(s) 216, 1588, 2083
AjnI CCWGG 1 cut(s) 2416
AjuI GAANNNNNNNTTGG 2 cut(s) 257, 289
Alw26I GTCTC 2 cut(s) 165, 1815
AlwI GGATC 1 cut(s) 838
Ama87I CYCGRG 2 cut(s) 268, 2108
AoxI GGCC 3 cut(s) 207, 1323, 2155
ApeKI GCWGC 5 cut(s) 1010, 1553, 1556, 2345, 2348
ApoI RAATTY 6 cut(s) 481, 852, 997, 1235, 2496, 2512
Asp700I GAANNNNTTC 2 cut(s) 749, 2072
AspLEI GCGC 5 cut(s) 175, 217, 227, 489, 2257
AspS9I GGNCC 1 cut(s) 2449
AsuHPI GGTGA 1 cut(s) 754
AsuII TTCGAA 1 cut(s) 692
AsuNHI GCTAGC 1 cut(s) 1006
AvaI CYCGRG 2 cut(s) 268, 2108
AvaII GGWCC 1 cut(s) 2449
BanI GGYRCC 1 cut(s) 172
BanII GRGCYC 1 cut(s) 333
BarI GAAGNNNNNNTAC 2 cut(s) 1641, 1673
BbvCI CCTCAGC 1 cut(s) 2390
BbvI GCAGC 5 cut(s) 997, 1565, 1568, 2332, 2360
BccI CCATC 5 cut(s) 661, 730, 1180, 1982, 2053
BceAI ACGGC 1 cut(s) 212
BciT130I CCWGG 1 cut(s) 2418
BciVI GTATCC 1 cut(s) 240
BclI TGATCA 1 cut(s) 1311
BcoDI GTCTC 2 cut(s) 165, 1815
BfaI CTAG 8 cut(s) 197, 846, 1007, 1560, 1751, 1779, 1842, 2172
BfmI CTRYAG 4 cut(s) 880, 1585, 1930, 2346
BfoI RGCGCY 2 cut(s) 176, 228
BfuAI ACCTGC 1 cut(s) 2342
BfuI GTATCC 1 cut(s) 240
BglII AGATCT 1 cut(s) 1872
BisI GCNGC 7 cut(s) 218, 1011, 1554, 1557, 2158, 2346, 2349
BlpI GCTNAGC 1 cut(s) 221
BlsI GCNGC 7 cut(s) 219, 1012, 1555, 1558, 2159, 2347, 2350
BmcAI AGTACT 1 cut(s) 731
Bme1390I CCNGG 1 cut(s) 2418
Bme18I GGWCC 1 cut(s) 2449
BmeT110I CYCGRG 2 cut(s) 268, 2108
BmgT120I GGNCC 1 cut(s) 2449
BmiI GGNNCC 2 cut(s) 174, 1384
BmrFI CCNGG 1 cut(s) 2418
BmsI GCATC 8 cut(s) 331, 447, 580, 658, 1748, 1945, 2197, 2219
BmtI GCTAGC 1 cut(s) 1010
BplI GAGNNNNNCTC 2 cut(s) 770, 802
BpmI CTGGAG 3 cut(s) 2117, 2289, 2400
Bpu10I CCTNAGC 1 cut(s) 2390
Bpu1102I GCTNAGC 1 cut(s) 221
Bpu14I TTCGAA 1 cut(s) 692
BpuEI CTTGAG 1 cut(s) 188
BsaHI GRCGYC 1 cut(s) 173
Bsc4I CCNNNNNNNGG 3 cut(s) 216, 1588, 2083
Bse1I ACTGG 3 cut(s) 174, 1620, 1930
Bse3DI GCAATG 5 cut(s) 500, 908, 1336, 1651, 2384
BseBI CCWGG 1 cut(s) 2418
BseGI GGATG 6 cut(s) 595, 1191, 1201, 1597, 1626, 1993
BseLI CCNNNNNNNGG 3 cut(s) 216, 1588, 2083
BseMI GCAATG 5 cut(s) 500, 908, 1336, 1651, 2384
BseMII CTCAG 5 cut(s) 212, 1263, 2250, 2381, 2481
BseNI ACTGG 3 cut(s) 174, 1620, 1930
BseRI GAGGAG 1 cut(s) 175
BseXI GCAGC 5 cut(s) 997, 1565, 1568, 2332, 2360
BsgI GTGCAG 4 cut(s) 776, 1268, 1500, 2172
Bsh1236I CGCG 3 cut(s) 217, 487, 952
BshFI GGCC 3 cut(s) 209, 1325, 2157
BshNI GGYRCC 1 cut(s) 172
BsiHKCI CYCGRG 2 cut(s) 268, 2108
BsiSI CCGG 1 cut(s) 176
BslFI GGGAC 3 cut(s) 310, 616, 956
BslI CCNNNNNNNGG 3 cut(s) 216, 1588, 2083
BsmAI GTCTC 2 cut(s) 165, 1815
BsmFI GGGAC 3 cut(s) 310, 616, 956
BsmI GAATGC 5 cut(s) 397, 700, 1612, 1918, 2314
BsnI GGCC 3 cut(s) 209, 1325, 2157
BsoBI CYCGRG 2 cut(s) 268, 2108
Bsp119I TTCGAA 1 cut(s) 692
Bsp1286I GDGCHC 1 cut(s) 333
Bsp143I GATC 9 cut(s) 830, 889, 1087, 1311, 1596, 1704, 1872, 2092, 2554
Bsp1720I GCTNAGC 1 cut(s) 221
BspACI CCGC 5 cut(s) 217, 740, 1579, 1848, 2158
BspANI GGCC 3 cut(s) 209, 1325, 2157
BspCNI CTCAG 5 cut(s) 213, 1264, 2251, 2382, 2480
BspFNI CGCG 3 cut(s) 217, 487, 952
BspLI GGNNCC 2 cut(s) 174, 1384
BspMAI CTGCAG 1 cut(s) 2350
BspMI ACCTGC 1 cut(s) 2342
BspOI GCTAGC 1 cut(s) 1010
BspPI GGATC 1 cut(s) 838
BspT104I TTCGAA 1 cut(s) 692
BspT107I GGYRCC 1 cut(s) 172
BsrDI GCAATG 5 cut(s) 500, 908, 1336, 1651, 2384
BsrI ACTGG 3 cut(s) 174, 1620, 1930
BssMI GATC 9 cut(s) 830, 889, 1087, 1311, 1596, 1704, 1872, 2092, 2554
BssNI GRCGYC 1 cut(s) 173
Bst2UI CCWGG 1 cut(s) 2418
Bst6I CTCTTC 2 cut(s) 168, 2574
BstACI GRCGYC 1 cut(s) 173
BstBI TTCGAA 1 cut(s) 692
BstDEI CTNAG 6 cut(s) 221, 1272, 2161, 2259, 2390, 2467
BstF5I GGATG 6 cut(s) 595, 1191, 1201, 1597, 1626, 1993
BstFNI CGCG 3 cut(s) 217, 487, 952
BstH2I RGCGCY 2 cut(s) 176, 228
BstHHI GCGC 5 cut(s) 175, 217, 227, 489, 2257
BstKTI GATC 9 cut(s) 833, 892, 1090, 1314, 1599, 1707, 1875, 2095, 2557
BstMAI GTCTC 2 cut(s) 165, 1815
BstMBI GATC 9 cut(s) 830, 889, 1087, 1311, 1596, 1704, 1872, 2092, 2554
BstMWI GCNNNNNNNGC 4 cut(s) 100, 484, 754, 1616
BstNI CCWGG 1 cut(s) 2418
BstNSI RCATGY 4 cut(s) 1166, 1176, 1769, 1939
BstSCI CCNGG 1 cut(s) 2416
BstSFI CTRYAG 4 cut(s) 880, 1585, 1930, 2346
BstUI CGCG 3 cut(s) 217, 487, 952
BstV1I GCAGC 5 cut(s) 997, 1565, 1568, 2332, 2360
BstX2I RGATCY 2 cut(s) 830, 1872
BstXI CCANNNNNNTGG 1 cut(s) 2003
BstYI RGATCY 2 cut(s) 830, 1872
BsuI GTATCC 1 cut(s) 240
BsuRI GGCC 3 cut(s) 209, 1325, 2157
BtsCI GGATG 6 cut(s) 595, 1191, 1201, 1597, 1626, 1993
BtsI GCAGTG 4 cut(s) 351, 496, 892, 1549
BtsIMutI CAGTG 7 cut(s) 15, 351, 496, 892, 1024, 1458, 1549
BveI ACCTGC 1 cut(s) 2342
CfoI GCGC 5 cut(s) 175, 217, 227, 489, 2257
Cfr13I GGNCC 1 cut(s) 2449
Csp6I GTAC 6 cut(s) 730, 874, 1728, 1837, 2024, 2087
CviQI GTAC 6 cut(s) 730, 874, 1728, 1837, 2024, 2087
DdeI CTNAG 6 cut(s) 221, 1272, 2161, 2259, 2390, 2467
DinI GGCGCC 1 cut(s) 174
DpnI GATC 9 cut(s) 832, 891, 1089, 1313, 1598, 1706, 1874, 2094, 2556
DpnII GATC 9 cut(s) 830, 889, 1087, 1311, 1596, 1704, 1872, 2092, 2554
DraI TTTAAA 1 cut(s) 2511
Eam1104I CTCTTC 2 cut(s) 168, 2574
EarI CTCTTC 2 cut(s) 168, 2574
Eco147I AGGCCT 1 cut(s) 209
Eco24I GRGCYC 1 cut(s) 333
Eco47I GGWCC 1 cut(s) 2449
Eco57I CTGAAG 1 cut(s) 1155
Eco88I CYCGRG 2 cut(s) 268, 2108
EcoRI GAATTC 2 cut(s) 481, 997
EcoRII CCWGG 1 cut(s) 2416
EcoT22I ATGCAT 2 cut(s) 910, 2212
EcoT38I GRGCYC 1 cut(s) 333
EgeI GGCGCC 1 cut(s) 174
EheI GGCGCC 1 cut(s) 174
FaqI GGGAC 3 cut(s) 310, 616, 956
FbaI TGATCA 1 cut(s) 1311
Fnu4HI GCNGC 7 cut(s) 218, 1011, 1554, 1557, 2158, 2346, 2349
FokI GGATG 6 cut(s) 602, 1198, 1208, 1604, 1613, 2000
FriOI GRGCYC 1 cut(s) 333
Fsp4HI GCNGC 7 cut(s) 218, 1011, 1554, 1557, 2158, 2346, 2349
FspBI CTAG 8 cut(s) 197, 846, 1007, 1560, 1751, 1779, 1842, 2172
GlaI GCGC 5 cut(s) 174, 216, 226, 488, 2256
GluI GCNGC 7 cut(s) 218, 1011, 1554, 1557, 2158, 2346, 2349
GsuI CTGGAG 3 cut(s) 2117, 2289, 2400
HaeII RGCGCY 2 cut(s) 176, 228
HaeIII GGCC 3 cut(s) 209, 1325, 2157
HapII CCGG 1 cut(s) 176
HhaI GCGC 5 cut(s) 175, 217, 227, 489, 2257
Hin1I GRCGYC 1 cut(s) 173
Hin6I GCGC 5 cut(s) 173, 215, 225, 487, 2255
HinP1I GCGC 5 cut(s) 173, 215, 225, 487, 2255
HincII GTYRAC 2 cut(s) 1498, 2137
HindII GTYRAC 2 cut(s) 1498, 2137
HindIII AAGCTT 3 cut(s) 746, 1156, 2069
HpaII CCGG 1 cut(s) 176
HphI GGTGA 1 cut(s) 754
Hpy166II GTNNAC 7 cut(s) 769, 935, 1498, 1886, 2119, 2137, 2452
Hpy188III TCNNGA 7 cut(s) 232, 452, 1380, 1702, 2096, 2371, 2552
Hpy8I GTNNAC 7 cut(s) 769, 935, 1498, 1886, 2119, 2137, 2452
Hpy99I CGWCG 1 cut(s) 233
HpyAV CCTTC 8 cut(s) 35, 235, 343, 1067, 1130, 1255, 2150, 2492
HpyCH4IV ACGT 1 cut(s) 937
HpyF10VI GCNNNNNNNGC 4 cut(s) 100, 484, 754, 1616
HpyF3I CTNAG 6 cut(s) 221, 1272, 2161, 2259, 2390, 2467
HpySE526I ACGT 1 cut(s) 937
Hsp92I GRCGYC 1 cut(s) 173
HspAI GCGC 5 cut(s) 173, 215, 225, 487, 2255
KasI GGCGCC 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 1311
Kzo9I GATC 9 cut(s) 830, 889, 1087, 1311, 1596, 1704, 1872, 2092, 2554
LmnI GCTCC 1 cut(s) 2270
Lsp1109I GCAGC 5 cut(s) 997, 1565, 1568, 2332, 2360
LweI GCATC 8 cut(s) 331, 447, 580, 658, 1748, 1945, 2197, 2219
MaeI CTAG 8 cut(s) 197, 846, 1007, 1560, 1751, 1779, 1842, 2172
MaeII ACGT 1 cut(s) 937
MaeIII GTNAC 4 cut(s) 13, 1622, 1656, 1699
MalI GATC 9 cut(s) 832, 891, 1089, 1313, 1598, 1706, 1874, 2094, 2556
MboI GATC 9 cut(s) 830, 889, 1087, 1311, 1596, 1704, 1872, 2092, 2554
MboII GAAGA 6 cut(s) 155, 1097, 1136, 2386, 2549, 2588
MflI RGATCY 2 cut(s) 830, 1872
MhlI GDGCHC 1 cut(s) 333
Mly113I GGCGCC 1 cut(s) 173
MlyI GAGTC 4 cut(s) 167, 779, 1558, 2195
MmeI TCCRAC 2 cut(s) 1996, 2020
Mph1103I ATGCAT 2 cut(s) 910, 2212
MroXI GAANNNNTTC 2 cut(s) 749, 2072
MseI TTAA 9 cut(s) 1220, 1239, 1257, 1878, 2247, 2439, 2510, 2528, 2587
MslI CAYNNNNRTG 6 cut(s) 408, 558, 1770, 1944, 1950, 2215
MspI CCGG 1 cut(s) 176
MspR9I CCNGG 1 cut(s) 2418
Mva1269I GAATGC 5 cut(s) 397, 700, 1612, 1918, 2314
MvaI CCWGG 1 cut(s) 2418
MvnI CGCG 3 cut(s) 217, 487, 952
MwoI GCNNNNNNNGC 4 cut(s) 100, 484, 754, 1616
NarI GGCGCC 1 cut(s) 173
NdeII GATC 9 cut(s) 830, 889, 1087, 1311, 1596, 1704, 1872, 2092, 2554
NheI GCTAGC 1 cut(s) 1006
NlaIV GGNNCC 2 cut(s) 174, 1384
NmuCI GTSAC 2 cut(s) 13, 1699
NsiI ATGCAT 2 cut(s) 910, 2212
NspI RCATGY 4 cut(s) 1166, 1176, 1769, 1939
NspV TTCGAA 1 cut(s) 692
PaeI GCATGC 4 cut(s) 1166, 1176, 1769, 1939
PceI AGGCCT 1 cut(s) 209
PctI GAATGC 5 cut(s) 397, 700, 1612, 1918, 2314
PdmI GAANNNNTTC 2 cut(s) 749, 2072
PfeI GAWTC 6 cut(s) 400, 662, 808, 1077, 1376, 1462
PflMI CCANNNNNTGG 1 cut(s) 2083
PfoI TCCNGGA 1 cut(s) 2416
PkrI GCNGC 7 cut(s) 219, 1012, 1555, 1558, 2159, 2347, 2350
PleI GAGTC 4 cut(s) 166, 779, 1558, 2194
PluTI GGCGCC 1 cut(s) 176
PpsI GAGTC 4 cut(s) 166, 779, 1558, 2194
Psp6I CCWGG 1 cut(s) 2416
PspGI CCWGG 1 cut(s) 2416
PspN4I GGNNCC 2 cut(s) 174, 1384
PspPI GGNCC 1 cut(s) 2449
PstI CTGCAG 1 cut(s) 2350
PsuI RGATCY 2 cut(s) 830, 1872
RsaI GTAC 6 cut(s) 731, 875, 1729, 1838, 2025, 2088
RsaNI GTAC 6 cut(s) 730, 874, 1728, 1837, 2024, 2087
RseI CAYNNNNRTG 6 cut(s) 408, 558, 1770, 1944, 1950, 2215
SaqAI TTAA 9 cut(s) 1220, 1239, 1257, 1878, 2247, 2439, 2510, 2528, 2587
SatI GCNGC 7 cut(s) 218, 1011, 1554, 1557, 2158, 2346, 2349
Sau3AI GATC 9 cut(s) 830, 889, 1087, 1311, 1596, 1704, 1872, 2092, 2554
Sau96I GGNCC 1 cut(s) 2449
ScaI AGTACT 1 cut(s) 731
SchI GAGTC 4 cut(s) 167, 779, 1558, 2195
ScrFI CCNGG 1 cut(s) 2418
SduI GDGCHC 1 cut(s) 333
SfaNI GCATC 8 cut(s) 331, 447, 580, 658, 1748, 1945, 2197, 2219
SfcI CTRYAG 4 cut(s) 880, 1585, 1930, 2346
SfoI GGCGCC 1 cut(s) 174
SfuI TTCGAA 1 cut(s) 692
SinI GGWCC 1 cut(s) 2449
SmiMI CAYNNNNRTG 6 cut(s) 408, 558, 1770, 1944, 1950, 2215
SmlI CTYRAG 1 cut(s) 203
SmoI CTYRAG 1 cut(s) 203
SphI GCATGC 4 cut(s) 1166, 1176, 1769, 1939
SseBI AGGCCT 1 cut(s) 209
SsiI CCGC 5 cut(s) 217, 740, 1579, 1848, 2158
SspDI GGCGCC 1 cut(s) 172
SspMI CTAG 8 cut(s) 197, 846, 1007, 1560, 1751, 1779, 1842, 2172
StuI AGGCCT 1 cut(s) 209
StyD4I CCNGG 1 cut(s) 2416
TaiI ACGT 1 cut(s) 940
TaqI TCGA 9 cut(s) 166, 231, 254, 660, 665, 692, 794, 2184, 2242
TatI WGTACW 3 cut(s) 729, 873, 2023
TauI GCSGC 2 cut(s) 220, 2160
TfiI GAWTC 6 cut(s) 400, 662, 808, 1077, 1376, 1462
Tru1I TTAA 9 cut(s) 1220, 1239, 1257, 1878, 2247, 2439, 2510, 2528, 2587
Tru9I TTAA 9 cut(s) 1220, 1239, 1257, 1878, 2247, 2439, 2510, 2528, 2587
TscAI CASTG 7 cut(s) 22, 351, 496, 892, 1024, 1458, 1549
TseFI GTSAC 2 cut(s) 13, 1699
TseI GCWGC 5 cut(s) 1010, 1553, 1556, 2345, 2348
Tsp45I GTSAC 2 cut(s) 13, 1699
TspRI CASTG 7 cut(s) 22, 351, 496, 892, 1024, 1458, 1549
Van91I CCANNNNNTGG 1 cut(s) 2083
VpaK11BI GGWCC 1 cut(s) 2449
XapI RAATTY 6 cut(s) 481, 852, 997, 1235, 2496, 2512
XceI RCATGY 4 cut(s) 1166, 1176, 1769, 1939
XcmI CCANNNNNNNNNTGG 1 cut(s) 2424
XmnI GAANNNNTTC 2 cut(s) 749, 2072
XspI CTAG 8 cut(s) 197, 846, 1007, 1560, 1751, 1779, 1842, 2172
ZrmI AGTACT 1 cut(s) 731
Zsp2I ATGCAT 2 cut(s) 910, 2212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.