Rw3G020090

No description available

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
23305829 .. 23314046
8218 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G020090.1

Sequence Viewer

Length: 3777 bp
ATGCCTGGCTTAGCTCACAGGGACGACCAATTCAGTGATGGGGCTTCCCCCATTTACACACTCTCCTCCCCCAATGGGTTTTGGTCCAAGCATCGCGACGATGTCAGCTACAATCAGCTCCAGAAGTTTTGGAGTGAGCTGTCACCACAAGCTCGGCAGAAACTTCTCAGGATTGACAAGCACACCCTTTTTGAACAAGCTCGTAAGAACATGTACTGCTCTAGATGCAATGGGTTACTGCTTGAAGGCTTTCTGCAGATTGTCATGTATGGAAAGTCTTTGAAGCAGGAGGGTGCAGGTGGGCAACTTTCCTGCAACAGATCAAAGGTCTCAAAAAGTCAAAAGGACGGTACAAGCATTACTAATGGGTGCCATGATGAAATCCCTGATCCATCTGTCCATCCTTGGGGTGGTCTAACCATTACACGTGAGGGGTCTTTAACACTCATGGATTGCTACTTGTATTGTAAGTCTCTCAAGGGGCTTCAAAATGTGTTTGACAGTGCACGTGCAAGGGAGCGAGAACGTGAATTACTTTATCCTGATGCCTGTGGTGGGGGAGGTCGAGGTTGGATAAGCCAAGGAATGGCGAGTTATGGCAGAGGACATGGAACACGGGAAACATGTGCGTTGCACACTGCCAGGCTTTCTTGTGATACATTAGTGGATTTCTGGTCTGCACTTGGAGAAGAAACTCGGCAGTCTCTTCTTAGGATGAAGGAAGAGGATTTCATTGAGAGGCTCATGTACAGGTTTGATAGCAAGAGATTTTGCAGAGATTGCAGAAGAAATGTTATCCGTGAGTTCAAGGAGCTAAAGGAGCTGAAGCGCTTGCGGAAGGAACCTCGCTGCACTAATTGGTTTTGTGTTGCTGATACTGCCTTCCAATATGAGGTATCTGATGGCACGGTACAAGCTGATTGGCGCCATACTTTTGCAGACACTGTTGGGACGTATCATCACTTTGAGTGGGCAGTTGGAACAGGCGAGGGAAAATCAGACATTTTGGAATTTGAAAATGTTGGCATGAATGGGAGTGTTAAGGTCAATGGCCTTGATCTTGGTGGTTTAAGTGCCTGCTTTATCACCCTGAGGGCTTTGAAACTAGATGGTCGTTGCACTGAGCTTTCTGTAAAAGCCCATGCTTTGAAGGGTCAACAATGTGTTCACTGCAGGCTTATAGTGGGGGATGGCTATGTAACAATTACAAGAGGAGAAAGTATCAGAAGGTTTTTTGAGCATGCTGAAGAAGCAGAGGAAGAAGAGGATGATGATTCCATGGACAAGGATGGAAATGATTTGGATGGAGAATGCTCCCGTCCACAAAAACATGCGAAGAGTCCTGAACTTGCTCGAGAATTTCTTCTAGATGCTGCAACTGTTATTTTCAAGGAACAGGTGGAGAAAGCATTTAGAGAAGGAACAGCACGCCAAAATGCACATAGCATCTTTGTTTGTCTTGCACTAAAGCTTCTGGAAGAACGAGTCCATGTTGCTTGCAAAGATATAATTACTCTAGAAAAGCAGATGAAACTTCTAGAAGAGGAGGAAAAAGAAAAGCGTGAAGAAGAAGAACGCAAGGAGAGGAGAAGGACAAAAGAAAGAGAAAAAAAACTGCGAAGAAAGGAGAGAATGAAAGGGAAAGAAAAGGACAAAGATCAGAAAGGTTCCGAAGAATATGAAACGCCTGTTTACCCTGTTTCCTCAAAGGAAGAATCATCTCTGATTGTTGATGAGGAGCCCAATAGTTCCATTAGCTGCATGGATTCAGTTAGTGAAGCTGGTGACAGTGTTCTATCTAGGCCTGGATCTCCTGAAATTCCAGATGTACAATTCCAAAATGGTTTCATTATTTCAAAATTCGACGACCCCTGCTTTGAAAGTCCTGATGGGGAAATTACCAATGGGAAAGGTGGTACAGATTCTTTTACAGTTGAGCAATCAAAGTTTTCCCGACGGAGATTAAAATTTAGGAGAGAAGTTCAACAGGATACATCCTTGAAGTGGTCTGACAGACGCCGGTATGCTGCTGTTTCTGATGCTGCTCCTGTGGTTAATAGATCCGAGTCGAGATGTAGTGGTGATAGTTTTGAGACTCCAGCAAGGGGCATTAATGGATCAAACAGGCAATTAAGAGTAAATGGCCCAAAGTTGAATGGTCGACATTGTGGTCCTAAGTTTACCGACAAGTTTCCCTGCTCTAGCAACAGGCTGAGTGACAGATATGACTTCAATTCTTGCAGCTGCAACAAGAGTACTGAATATAGGGCGAAGGTTGAGCCACATGTTTCTCCCGCCAGAGTGTGCTGGGAGACCAAAACTGCAAGCAAGTCAGAATCTGCATTAGATATGTCCAGGCAATTCTATCGTGGTAATAGGTATAACCAAATGGACATGCGTGATAGTTGTGCAAGGCCCAAAAGCAAAGTCAATTCTGGGGACAATCCTTCTAGAGATTTGCTTCATCCCAAGAAAATTTGGGAGCCCATGGAGGCACAGAAAAAGTATCCTCGGAGTAACTCAGATTCTGATGTTACCTTAAGTTCATCTGCTTTCAAGGCCAAAGAACCTACAAGTAAAATCGTCAAGTCATCTGGTGACTTATGTAGGGGTGAAGTTGGCGCAGATACCGGTGAAATTTATGAGGATAATAATTCAAAGGAATCTAGCATGTGCAGTGTAGAAATGGATGTCAGTTGCCAGAATGGACTTTGTACAAGAGCACCGGATTCTTGCAACTCGATGCAAGGTTCTTATGAGGAGAATGGAATATCTGATCCCATTGTGAACTGCACTTCTAATTCTGATAATTGCTCATCATGCCTAAGTGAGGGGGACAGCAACACGACCTCATCTAATCATGGAAATCAGGAATCTTCATCCACCTCAGATTCAGAAGATGCGAGCCAGCAATCAGGAGGAAAAGAAACTTCTGTATGTATTCCAAATGGTTTTACAGAGTGCAATGAAGTTGGTATTGAGAATAATCCGAATGTGAAGAGAAGGGAGCTTACAGAAAGCAGGGAATTGACAGGTCTTCCACCGAATGGGGGGACTAATCCATTAACAAATGTTCAGAGTTTTGATAATGGAATATCTGCTGCTAGCTTGGGTTCCCAGCAGCAAAGCATGCTTCCTACGATGCAAAACCAAAATGTACACTTTCCTGTGTTTCAAGCTCCTTCGACAATGGGTTACTATCACCAAAGTCCAGTTTCATGGCCACCTGCTCCAACCAATGGATTATTGCCGTTTACTCATCCCAACCACTATTTATATGCTAGCCCCCTTGGGTATGGTATTAATGGAAACTCAGGTTTCTGCATGCAGTATAGTCCTATGCAGCAGCTACCTACTCCCTTGTTTACGCCTACCGCGGTTCCAATGTATCAACCACTCATCAATACGGAGGAGCAGTCCCAAATTTCCAAGTCAGGTGTGCAAGAATCTCCTAATGAAGCTAATACAGAGAGTTTGGATGGAACTGGACATCATTCTATGCAAGCAGCATCAAGTGGAGAAGGAGCACATGATGATAATTCTGGCAAATTACATATGGACAACGGTGGCTTTTCTTTATTCCATTTTGGTGGTCCTGTTGCTCTTTCAAGTGGATGTAATTCAAATTCTATGCCTTCACAAGAAGAGATTGTTCGGGATTTTCCTATAAAATGTTCAGATCATATTGAGAATGATCATGCATGCAATAAGGAGGCTACTATGGAAGAATACAACCTGTTTGCAGCAAGCAATGGCATGAGGTTTACATTCTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1258

Amino Acids

140.48

Weight (kDa)

5.72

Isoelectric Point (pI)

49.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 287, 3235
AasI GACNNNNNNGTC 1 cut(s) 2169
Acc36I ACCTGC 2 cut(s) 287, 3235
AccB1I GGYRCC 2 cut(s) 369, 924
AccB7I CCANNNNNTGG 3 cut(s) 586, 3047, 3239
AccI GTMKAC 1 cut(s) 2161
AccII CGCG 2 cut(s) 96, 3377
AciI CCGC 4 cut(s) 835, 2295, 3375, 3377
AclWI GGATC 5 cut(s) 383, 1816, 2055, 2125, 2771
AcoI YGGCCR 1 cut(s) 3221
AcsI RAATTY 9 cut(s) 1010, 1358, 1818, 1859, 1967, 2475, 2637, 3423, 3625
AcuI CTGAAG 2 cut(s) 845, 1266
AcvI CACGTG 2 cut(s) 428, 509
AcyI GRCGYC 2 cut(s) 925, 2017
AfaI GTAC 9 cut(s) 215, 352, 749, 912, 1830, 1918, 2257, 2716, 3159
AfeI AGCGCT 1 cut(s) 830
AflII CTTAAG 1 cut(s) 2539
AflIII ACRYGT 4 cut(s) 210, 425, 623, 2284
AgeI ACCGGT 1 cut(s) 2630
AjnI CCWGG 4 cut(s) 4, 641, 1804, 2354
Alw21I GWGCWC 3 cut(s) 508, 2725, 3529
Alw26I GTCTC 5 cut(s) 334, 477, 708, 2087, 2306
Alw44I GTGCAC 1 cut(s) 504
AlwI GGATC 5 cut(s) 383, 1816, 2055, 2125, 2771
AlwNI CAGNNNCTG 3 cut(s) 944, 2339, 2528
Ama87I CYCGRG 1 cut(s) 1353
Aor51HI AGCGCT 1 cut(s) 830
AoxI GGCC 6 cut(s) 1051, 1802, 2143, 2414, 2559, 3221
ApaLI GTGCAC 1 cut(s) 504
ApoI RAATTY 9 cut(s) 1010, 1358, 1818, 1859, 1967, 2475, 2637, 3423, 3625
ArsI GACNNNNNNTTYG 4 cut(s) 1859, 1891, 2412, 2444
AseI ATTAAT 2 cut(s) 2112, 3303
AsiGI ACCGGT 1 cut(s) 2630
Asp700I GAANNNNTTC 2 cut(s) 249, 1362
AspLEI GCGC 3 cut(s) 831, 927, 2624
AspS9I GGNCC 5 cut(s) 84, 2144, 2171, 2415, 3593
AsuHPI GGTGA 8 cut(s) 135, 1078, 1796, 2093, 2609, 2624, 2645, 3194
AsuNHI GCTAGC 2 cut(s) 3104, 3281
AvaI CYCGRG 1 cut(s) 1353
AvaII GGWCC 3 cut(s) 84, 2171, 3593
AxyI CCTNAGG 1 cut(s) 1091
BaeGI GKGCMC 1 cut(s) 508
BaeI ACNNNNGTAYC 2 cut(s) 648, 681
BalI TGGCCA 1 cut(s) 3223
BanI GGYRCC 2 cut(s) 369, 924
BanII GRGCYC 2 cut(s) 1743, 2487
BarI GAAGNNNNNNTAC 2 cut(s) 2995, 3027
BbrPI CACGTG 2 cut(s) 428, 509
BbsI GAAGAC 1 cut(s) 3029
Bbv12I GWGCWC 3 cut(s) 508, 2725, 3529
BceAI ACGGC 1 cut(s) 3235
BcgI CGANNNNNNTGC 2 cut(s) 2348, 2382
BciT130I CCWGG 4 cut(s) 6, 643, 1806, 2356
BciVI GTATCC 2 cut(s) 1984, 2517
BclI TGATCA 1 cut(s) 3694
BcoDI GTCTC 5 cut(s) 334, 477, 708, 2087, 2306
BfmI CTRYAG 2 cut(s) 254, 1171
BfoI RGCGCY 2 cut(s) 832, 928
BfrI CTTAAG 1 cut(s) 2539
BfuAI ACCTGC 2 cut(s) 287, 3235
BfuI GTATCC 2 cut(s) 1984, 2517
BlpI GCTNAGC 1 cut(s) 10
BmcAI AGTACT 1 cut(s) 2257
Bme1390I CCNGG 4 cut(s) 6, 643, 1806, 2356
Bme18I GGWCC 3 cut(s) 84, 2171, 3593
BmeT110I CYCGRG 1 cut(s) 1353
BmgT120I GGNCC 5 cut(s) 84, 2144, 2171, 2415, 3593
BmiI GGNNCC 8 cut(s) 371, 843, 926, 1669, 1740, 2484, 3115, 3381
BmrFI CCNGG 4 cut(s) 6, 643, 1806, 2356
BmtI GCTAGC 2 cut(s) 3108, 3285
BpiI GAAGAC 1 cut(s) 3029
BpmI CTGGAG 2 cut(s) 104, 2082
Bpu1102I GCTNAGC 1 cut(s) 10
BpuEI CTTGAG 1 cut(s) 461
BsaAI YACGTR 2 cut(s) 428, 509
BsaHI GRCGYC 2 cut(s) 925, 2017
BsaI GGTCTC 2 cut(s) 334, 2306
BsaJI CCNNGG 7 cut(s) 404, 580, 1278, 2487, 2510, 3289, 3375
BsaWI WCCGGW 2 cut(s) 2630, 2725
BsaXI ACNNNNNCTCC 4 cut(s) 47, 77, 3401, 3431
Bse118I RCCGGY 2 cut(s) 2019, 2630
Bse1I ACTGG 2 cut(s) 3212, 3490
Bse21I CCTNAGG 1 cut(s) 1091
Bse3DI GCAATG 3 cut(s) 235, 2971, 3757
BseBI CCWGG 4 cut(s) 6, 643, 1806, 2356
BseDI CCNNGG 7 cut(s) 404, 580, 1278, 2487, 2510, 3289, 3375
BseMI GCAATG 3 cut(s) 235, 2971, 3757
BseMII CTCAG 7 cut(s) 181, 1082, 1113, 2204, 2535, 2901, 3327
BseNI ACTGG 2 cut(s) 3212, 3490
BseRI GAGGAG 7 cut(s) 55, 1227, 1559, 1600, 1751, 2774, 3425
BseSI GKGCMC 1 cut(s) 508
BseYI CCCAGC 2 cut(s) 2307, 3117
BsgI GTGCAG 5 cut(s) 315, 663, 835, 2695, 2776
Bsh1236I CGCG 2 cut(s) 96, 3377
BshFI GGCC 6 cut(s) 1053, 1804, 2145, 2416, 2561, 3223
BshNI GGYRCC 2 cut(s) 369, 924
BshTI ACCGGT 1 cut(s) 2630
BsiHKAI GWGCWC 3 cut(s) 508, 2725, 3529
BsiHKCI CYCGRG 1 cut(s) 1353
BsiSI CCGG 3 cut(s) 2020, 2631, 2726
BslFI GGGAC 6 cut(s) 35, 964, 2453, 2849, 3067, 3403
BsmAI GTCTC 5 cut(s) 334, 477, 708, 2087, 2306
BsmFI GGGAC 6 cut(s) 35, 964, 2453, 2849, 3067, 3403
BsmI GAATGC 1 cut(s) 1316
BsnI GGCC 6 cut(s) 1053, 1804, 2145, 2416, 2561, 3223
Bso31I GGTCTC 2 cut(s) 334, 2306
BsoBI CYCGRG 1 cut(s) 1353
Bsp1286I GDGCHC 5 cut(s) 508, 1743, 2487, 2725, 3529
Bsp1407I TGTACA 4 cut(s) 747, 1828, 2714, 3157
Bsp1720I GCTNAGC 1 cut(s) 10
Bsp19I CCATGG 2 cut(s) 1278, 2487
Bsp68I TCGCGA 1 cut(s) 96
BspACI CCGC 4 cut(s) 835, 2295, 3375, 3377
BspANI GGCC 6 cut(s) 1053, 1804, 2145, 2416, 2561, 3223
BspCNI CTCAG 7 cut(s) 180, 1083, 1114, 2205, 2534, 2900, 3326
BspFNI CGCG 2 cut(s) 96, 3377
BspLI GGNNCC 8 cut(s) 371, 843, 926, 1669, 1740, 2484, 3115, 3381
BspMAI CTGCAG 2 cut(s) 258, 1175
BspMI ACCTGC 2 cut(s) 287, 3235
BspOI GCTAGC 2 cut(s) 3108, 3285
BspPI GGATC 5 cut(s) 383, 1816, 2055, 2125, 2771
BspT107I GGYRCC 2 cut(s) 369, 924
BspTI CTTAAG 1 cut(s) 2539
BspTNI GGTCTC 2 cut(s) 334, 2306
BsrDI GCAATG 3 cut(s) 235, 2971, 3757
BsrFI RCCGGY 2 cut(s) 2019, 2630
BsrGI TGTACA 4 cut(s) 747, 1828, 2714, 3157
BsrI ACTGG 2 cut(s) 3212, 3490
BssAI RCCGGY 2 cut(s) 2019, 2630
BssECI CCNNGG 7 cut(s) 404, 580, 1278, 2487, 2510, 3289, 3375
BssNI GRCGYC 2 cut(s) 925, 2017
BssT1I CCWWGG 5 cut(s) 404, 580, 1278, 2487, 3289
Bst2UI CCWGG 4 cut(s) 6, 643, 1806, 2356
Bst4CI ACNGT 8 cut(s) 350, 503, 910, 946, 1381, 1790, 1933, 3566
Bst6I CTCTTC 7 cut(s) 711, 717, 1257, 1331, 1536, 2993, 3639
BstACI GRCGYC 2 cut(s) 925, 2017
BstAFI CTTAAG 1 cut(s) 2539
BstAPI GCANNNNNTGC 2 cut(s) 780, 3130
BstAUI TGTACA 4 cut(s) 747, 1828, 2714, 3157
BstBAI YACGTR 2 cut(s) 428, 509
BstDSI CCRYGG 3 cut(s) 1278, 2487, 3375
BstENI CCTNNNNNAGG 1 cut(s) 2828
BstFNI CGCG 2 cut(s) 96, 3377
BstH2I RGCGCY 2 cut(s) 832, 928
BstHHI GCGC 3 cut(s) 831, 927, 2624
BstMAI GTCTC 5 cut(s) 334, 477, 708, 2087, 2306
BstMWI GCNNNNNNNGC 8 cut(s) 225, 780, 820, 878, 1250, 2558, 2820, 3130
BstNI CCWGG 4 cut(s) 6, 643, 1806, 2356
BstSCI CCNGG 4 cut(s) 4, 641, 1804, 2354
BstSFI CTRYAG 2 cut(s) 254, 1171
BstSLI GKGCMC 1 cut(s) 508
BstUI CGCG 2 cut(s) 96, 3377
BstV2I GAAGAC 1 cut(s) 3029
BstX2I RGATCY 2 cut(s) 1808, 2060
BstXI CCANNNNNNTGG 2 cut(s) 3219, 3590
BstYI RGATCY 2 cut(s) 1808, 2060
Bsu36I CCTNAGG 1 cut(s) 1091
BsuI GTATCC 2 cut(s) 1984, 2517
BsuRI GGCC 6 cut(s) 1053, 1804, 2145, 2416, 2561, 3223
BtgI CCRYGG 3 cut(s) 1278, 2487, 3375
BtgZI GCGATG 1 cut(s) 77
BtsI GCAGTG 3 cut(s) 636, 1168, 2683
BtsIMutI CAGTG 8 cut(s) 40, 508, 636, 942, 1119, 1168, 1795, 2683
BtuMI TCGCGA 1 cut(s) 96
BveI ACCTGC 2 cut(s) 287, 3235
CaiI CAGNNNCTG 3 cut(s) 944, 2339, 2528
CfoI GCGC 3 cut(s) 831, 927, 2624
Cfr10I RCCGGY 2 cut(s) 2019, 2630
Cfr13I GGNCC 5 cut(s) 84, 2144, 2171, 2415, 3593
Cfr42I CCGCGG 1 cut(s) 3378
CseI GACGC 1 cut(s) 2025
Csp6I GTAC 9 cut(s) 214, 351, 748, 911, 1829, 1917, 2256, 2715, 3158
CspAI ACCGGT 1 cut(s) 2630
CviQI GTAC 9 cut(s) 214, 351, 748, 911, 1829, 1917, 2256, 2715, 3158
DinI GGCGCC 1 cut(s) 926
DrdI GACNNNNNNGTC 1 cut(s) 2169
DseDI GACNNNNNNGTC 1 cut(s) 2169
EaeI YGGCCR 1 cut(s) 3221
Eam1104I CTCTTC 7 cut(s) 711, 717, 1257, 1331, 1536, 2993, 3639
EarI CTCTTC 7 cut(s) 711, 717, 1257, 1331, 1536, 2993, 3639
Eco130I CCWWGG 5 cut(s) 404, 580, 1278, 2487, 3289
Eco147I AGGCCT 1 cut(s) 1804
Eco24I GRGCYC 2 cut(s) 1743, 2487
Eco31I GGTCTC 2 cut(s) 334, 2306
Eco47I GGWCC 3 cut(s) 84, 2171, 3593
Eco47III AGCGCT 1 cut(s) 830
Eco57I CTGAAG 2 cut(s) 845, 1266
Eco72I CACGTG 2 cut(s) 428, 509
Eco81I CCTNAGG 1 cut(s) 1091
Eco88I CYCGRG 1 cut(s) 1353
EcoNI CCTNNNNNAGG 1 cut(s) 2828
EcoRII CCWGG 4 cut(s) 4, 641, 1804, 2354
EcoT14I CCWWGG 5 cut(s) 404, 580, 1278, 2487, 3289
EcoT22I ATGCAT 1 cut(s) 3703
EcoT38I GRGCYC 2 cut(s) 1743, 2487
EgeI GGCGCC 1 cut(s) 926
EheI GGCGCC 1 cut(s) 926
ErhI CCWWGG 5 cut(s) 404, 580, 1278, 2487, 3289
FaqI GGGAC 6 cut(s) 35, 964, 2453, 2849, 3067, 3403
FauI CCCGC 1 cut(s) 2302
FauNDI CATATG 1 cut(s) 3555
FbaI TGATCA 1 cut(s) 3694
FblI GTMKAC 1 cut(s) 2161
FriOI GRGCYC 2 cut(s) 1743, 2487
GlaI GCGC 3 cut(s) 830, 926, 2623
GsaI CCCAGC 2 cut(s) 2311, 3121
GsuI CTGGAG 2 cut(s) 104, 2082
HaeII RGCGCY 2 cut(s) 832, 928
HaeIII GGCC 6 cut(s) 1053, 1804, 2145, 2416, 2561, 3223
HapII CCGG 3 cut(s) 2020, 2631, 2726
HgaI GACGC 1 cut(s) 2025
HhaI GCGC 3 cut(s) 831, 927, 2624
Hin1I GRCGYC 2 cut(s) 925, 2017
Hin6I GCGC 3 cut(s) 829, 925, 2622
HinP1I GCGC 3 cut(s) 829, 925, 2622
HincII GTYRAC 2 cut(s) 1157, 2162
HindII GTYRAC 2 cut(s) 1157, 2162
HindIII AAGCTT 1 cut(s) 1469
HpaII CCGG 3 cut(s) 2020, 2631, 2726
HphI GGTGA 8 cut(s) 135, 1078, 1796, 2093, 2609, 2624, 2645, 3194
Hpy99I CGWCG 3 cut(s) 101, 1868, 1959
HpyCH4III ACNGT 8 cut(s) 350, 503, 910, 946, 1381, 1790, 1933, 3566
HpyCH4IV ACGT 4 cut(s) 427, 508, 526, 953
HpyF10VI GCNNNNNNNGC 8 cut(s) 225, 780, 820, 878, 1250, 2558, 2820, 3130
HpySE526I ACGT 4 cut(s) 427, 508, 526, 953
Hsp92I GRCGYC 2 cut(s) 925, 2017
HspAI GCGC 3 cut(s) 829, 925, 2622
KasI GGCGCC 1 cut(s) 924
Ksp22I TGATCA 1 cut(s) 3694
KspI CCGCGG 1 cut(s) 3378
MaeII ACGT 4 cut(s) 427, 508, 526, 953
MaeIII GTNAC 9 cut(s) 141, 234, 1198, 1784, 2216, 2516, 2533, 2597, 3194
MflI RGATCY 2 cut(s) 1808, 2060
MhlI GDGCHC 5 cut(s) 508, 1743, 2487, 2725, 3529
MlsI TGGCCA 1 cut(s) 3223
MluNI TGGCCA 1 cut(s) 3223
Mly113I GGCGCC 1 cut(s) 925
MlyI GAGTC 4 cut(s) 1348, 1494, 2075, 2089
MmeI TCCRAC 3 cut(s) 551, 958, 3257
Mox20I TGGCCA 1 cut(s) 3223
Mph1103I ATGCAT 1 cut(s) 3703
MroXI GAANNNNTTC 2 cut(s) 249, 1362
MscI TGGCCA 1 cut(s) 3223
MslI CAYNNNNRTG 1 cut(s) 3588
Msp20I TGGCCA 1 cut(s) 3223
MspA1I CMGCKG 2 cut(s) 2244, 3377
MspCI CTTAAG 1 cut(s) 2539
MspI CCGG 3 cut(s) 2020, 2631, 2726
MspR9I CCNGG 4 cut(s) 6, 643, 1806, 2356
Mva1269I GAATGC 1 cut(s) 1316
MvaI CCWGG 4 cut(s) 6, 643, 1806, 2356
MvnI CGCG 2 cut(s) 96, 3377
MwoI GCNNNNNNNGC 8 cut(s) 225, 780, 820, 878, 1250, 2558, 2820, 3130
NarI GGCGCC 1 cut(s) 925
NcoI CCATGG 2 cut(s) 1278, 2487
NdeI CATATG 1 cut(s) 3555
NheI GCTAGC 2 cut(s) 3104, 3281
NlaIV GGNNCC 8 cut(s) 371, 843, 926, 1669, 1740, 2484, 3115, 3381
NmeAIII GCCGAG 2 cut(s) 133, 676
NmuCI GTSAC 4 cut(s) 141, 1784, 2216, 2597
NruI TCGCGA 1 cut(s) 96
NsiI ATGCAT 1 cut(s) 3703
PaeI GCATGC 4 cut(s) 1244, 3133, 3328, 3705
PaeR7I CTCGAG 1 cut(s) 1353
PaqCI CACCTGC 2 cut(s) 287, 3235
PceI AGGCCT 1 cut(s) 1804
PciI ACATGT 3 cut(s) 210, 623, 2284
PctI GAATGC 1 cut(s) 1316
PdmI GAANNNNTTC 2 cut(s) 249, 1362
PflFI GACNNNGTC 1 cut(s) 101
PflMI CCANNNNNTGG 3 cut(s) 586, 3047, 3239
PinAI ACCGGT 1 cut(s) 2630
PleI GAGTC 4 cut(s) 1347, 1493, 2074, 2089
PluTI GGCGCC 1 cut(s) 928
PmaCI CACGTG 2 cut(s) 428, 509
PmlI CACGTG 2 cut(s) 428, 509
PpsI GAGTC 4 cut(s) 1347, 1493, 2074, 2089
Ppu21I YACGTR 2 cut(s) 428, 509
PscI ACATGT 3 cut(s) 210, 623, 2284
PshBI ATTAAT 2 cut(s) 2112, 3303
Psp6I CCWGG 4 cut(s) 4, 641, 1804, 2354
PspCI CACGTG 2 cut(s) 428, 509
PspFI CCCAGC 2 cut(s) 2307, 3117
PspGI CCWGG 4 cut(s) 4, 641, 1804, 2354
PspN4I GGNNCC 8 cut(s) 371, 843, 926, 1669, 1740, 2484, 3115, 3381
PspPI GGNCC 5 cut(s) 84, 2144, 2171, 2415, 3593
PsrI GAACNNNNNNTAC 2 cut(s) 516, 548
PstI CTGCAG 2 cut(s) 258, 1175
PstNI CAGNNNCTG 3 cut(s) 944, 2339, 2528
PsuI RGATCY 2 cut(s) 1808, 2060
PsyI GACNNNGTC 1 cut(s) 101
PvuII CAGCTG 1 cut(s) 2244
RruI TCGCGA 1 cut(s) 96
RsaI GTAC 9 cut(s) 215, 352, 749, 912, 1830, 1918, 2257, 2716, 3159
RsaNI GTAC 9 cut(s) 214, 351, 748, 911, 1829, 1917, 2256, 2715, 3158
RseI CAYNNNNRTG 1 cut(s) 3588
SacII CCGCGG 1 cut(s) 3378
SalI GTCGAC 1 cut(s) 2160
Sau96I GGNCC 5 cut(s) 84, 2144, 2171, 2415, 3593
ScaI AGTACT 1 cut(s) 2257
SchI GAGTC 4 cut(s) 1348, 1494, 2075, 2089
ScrFI CCNGG 4 cut(s) 6, 643, 1806, 2356
SduI GDGCHC 5 cut(s) 508, 1743, 2487, 2725, 3529
SfcI CTRYAG 2 cut(s) 254, 1171
SfoI GGCGCC 1 cut(s) 926
Sfr274I CTCGAG 1 cut(s) 1353
Sfr303I CCGCGG 1 cut(s) 3378
SgrBI CCGCGG 1 cut(s) 3378
SinI GGWCC 3 cut(s) 84, 2171, 3593
SlaI CTCGAG 1 cut(s) 1353
SmiMI CAYNNNNRTG 1 cut(s) 3588
SmlI CTYRAG 3 cut(s) 476, 1353, 2539
SmoI CTYRAG 3 cut(s) 476, 1353, 2539
SphI GCATGC 4 cut(s) 1244, 3133, 3328, 3705
SseBI AGGCCT 1 cut(s) 1804
SsiI CCGC 4 cut(s) 835, 2295, 3375, 3377
SspDI GGCGCC 1 cut(s) 924
StuI AGGCCT 1 cut(s) 1804
StyD4I CCNGG 4 cut(s) 4, 641, 1804, 2354
StyI CCWWGG 5 cut(s) 404, 580, 1278, 2487, 3289
TaaI ACNGT 8 cut(s) 350, 503, 910, 946, 1381, 1790, 1933, 3566
TaiI ACGT 4 cut(s) 430, 511, 529, 956
TaqI TCGA 7 cut(s) 565, 1354, 1863, 2069, 2161, 2741, 3185
TatI WGTACW 6 cut(s) 213, 747, 1828, 2255, 2714, 3157
TscAI CASTG 8 cut(s) 40, 508, 643, 949, 1126, 1175, 1795, 2683
TseFI GTSAC 4 cut(s) 141, 1784, 2216, 2597
Tsp45I GTSAC 4 cut(s) 141, 1784, 2216, 2597
TspGWI ACGGA 3 cut(s) 788, 1972, 3422
TspRI CASTG 8 cut(s) 40, 508, 643, 949, 1126, 1175, 1795, 2683
Tth111I GACNNNGTC 1 cut(s) 101
Van91I CCANNNNNTGG 3 cut(s) 586, 3047, 3239
Vha464I CTTAAG 1 cut(s) 2539
VneI GTGCAC 1 cut(s) 504
VpaK11BI GGWCC 3 cut(s) 84, 2171, 3593
VspI ATTAAT 2 cut(s) 2112, 3303
XagI CCTNNNNNAGG 1 cut(s) 2828
XapI RAATTY 9 cut(s) 1010, 1358, 1818, 1859, 1967, 2475, 2637, 3423, 3625
XbaI TCTAGA 5 cut(s) 221, 1366, 1516, 1537, 2450
XcmI CCANNNNNNNNNTGG 3 cut(s) 35, 407, 1759
XhoI CTCGAG 1 cut(s) 1353
XmiI GTMKAC 1 cut(s) 2161
XmnI GAANNNNTTC 2 cut(s) 249, 1362
ZrmI AGTACT 1 cut(s) 2257
Zsp2I ATGCAT 1 cut(s) 3703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.