Rorug03G0183900

protein C4orf29 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0013448
Physical Location & Seq
Reverse (-)
15822556 .. 15829511
6956 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0183900.1

Sequence Viewer

Length: 1716 bp
ATGGCATCTACGGGGCTGAACTACCAGACGTGCGGCTGGTCCTCGCCAACAGCAACCACGCTTCCTCCTCGCACGTGTCTGGGTGCGGCTCGTGTGAACGGAGCAGCGGTGAGCTCGAAGAAGAACAACAAGAAGAGAGGGTTTGAGTTGAGAGCAGTGGCGGCGGCGACGGCGATGGAGGCAGTGGAGCTGAAGAAGGACATAGCCGAGTTCTACGACGAGTCGTCTGGGCTATGGGAGGATCTCTGGGGCGACCACATGCACCACGGCTTCTACGACCCCAAGGCCGCCGACGTTTCGGTGTCGGACCACCGGGCGGCCCAGACCCGGATGATCGACGAGGTGCTCCGGTTCGCAGGGATTTCTGACAAGTGTCCAATTGGGAATGTAGTGGATGTTGGGTGTGGGATTGGAGGGAGCTCCAGATATCTGGCTGGCAAATACGGGGCCAATTGCAAAGGGATTACTCTGAGTCCTGTACAGGCTCAAAGGGCCAATGCTCTTGCTGCTGATCAAGGCCTAGCCAATAAGGCATCCTTTCAAGTTGCTGATGCTCTAGCACAACCATTTCCTGATGGCCAATTTGATCTGGTTTGGTCCATGGAGAGTGGGGAACACATGCCTGATAAAGCAAAGTTTGTTGATGAGTTGGTTCGAGTTGCGGCACCAGGAGCAACGATAATACTAGTTACATGGTGCCATAGGGATCTTGGTGCTTCTGAACAATCATTGCAGCCAGATGAGAAAAAGCTCCTGGACAAGATATGCAATGCTTTCTATCTTCCAGCTTGGTGTTCTACTGCTGACTACCTCAAGCTACTTGAGTCCTACTCACTCGAGGATATCAAGGCTGAGGACTGGTCTCCGTATGTAGCCCCATTTTGGCCGGCAGTGATTCGCTCAGCATTGACATTTAAGGGTTTCTTTTCTCTGTTGCGCACAGCTAAGATGAGTAGCGAAGGGAAGGTTCATCCAGTGACTTCCAATGGAGATTTAACTAAGAAGCCCTTCAAGATCTTTGTGGGTTATGATCCACGTGAAGATCTTGCATTTGAGGTCTGTCGCCACTCAATATTGAAGCGATCTTCAATCCCTGTTGAGATTGTACCAATCAAACAATCGGAGCTGAGAAAGAACAGCCTCTACTGGCGTGAAAGAGGGCAGTTTGAGAGCACCGAGTTTTCTTTCACTCGGTTCTTGACTCCACATTTGGCCAACTATGATGGTTGGGCAATGTTTGTGGACTGTGACTTTCTTTACCTTGCTGACATTAAGGAACTCACGGATTTGATTGATGATAAGTACGCTATAATGTGTGTTCAACATGATTATACACCAAAGGAGACAACAAAGATGGATGGAGCGGTGCAAACTGTGTACCCGAGGAAGAACTGGTCTTCCATGGTCTTGTATAACTCTGGCCATCCCAAGAACAAGGTCCTGACACCTGAGGTTGTGAATAAGGAAACAGGTGCTTTCCTTCATAGGTTTCAGTGGCTTGAGGATGGTGAAATTGGGTCGATACCGTTTGTTTGGAACTTTCTTGAGGGACATAACCAGGTTGTTGAAAATGATCCCACAACTTTTCCCAAGTCGATTCACTATACTCGGGGAGGACCATGGTTTGAGGCCTGGAAGCATTGTGAGTTTGCAGACCTATGGTTAAAGGAGATGGAGGAGTACAAGCAGGAAGCACAGAAGAAAGTTGAAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2048

Protein Analysis

571

Amino Acids

64.18

Weight (kDa)

5.89

Isoelectric Point (pI)

37.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CMAS PF02353 66 - 228 1.2e-10 Mycolic acid cyclopropane synthetase
Methyltransf_23 PF13489 106 - 245 5.8e-13 Methyltransferase domain
Methyltransf_31 PF13847 129 - 240 7.9e-13 Methyltransferase domain
Methyltransf_25 PF13649 130 - 224 1.2e-17 Methyltransferase domain
Methyltransf_11 PF08241 131 - 228 4.5e-20 Methyltransferase domain
Methyltransf_12 PF08242 131 - 226 3.4e-09 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013448)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G12150
fragaria_vesca FvH4_6g22800
malus_domestica MD12G1062300.v1.1
prunus_persica Prupe.7G072500_v2.0.a1 Prupe.7G072500_v2.0.a1
pyrus_communis pycom12g05500 pycom14g05050
rosa_chinensis RchiOBHm_Chr3g0480421
rosa_laevigata RLG00000023483
rosa_multiflora Rmu_sc0002205.1_g000024
rosa_roxburghii Rroxscaffold_6G00401370
rosa_rugosa Rorug03G0183800 Rorug03G0183900
rosa_samantha Rh3AG235300 Rh3BG268200 Rh3CG265300 Rh3DG261200
rosa_wichuraiana Rw3G021120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 938
AccB1I GGYRCC 2 cut(s) 664, 696
AccBSI CCGCTC 1 cut(s) 1364
AciI CCGC 9 cut(s) 33, 86, 107, 161, 164, 288, 317, 662, 1364
AclWI GGATC 4 cut(s) 249, 714, 1025, 1568
AcoI YGGCCR 4 cut(s) 577, 884, 1212, 1420
AcuI CTGAAG 1 cut(s) 212
AcvI CACGTG 2 cut(s) 75, 1037
AfaI GTAC 5 cut(s) 480, 1107, 1304, 1379, 1682
AfiI CCNNNNNNNGG 3 cut(s) 316, 327, 882
AflIII ACRYGT 1 cut(s) 74
AgsI TTSAA 7 cut(s) 542, 1012, 1078, 1089, 1322, 1568, 1709
AhdI GACNNNNNGTC 1 cut(s) 223
AhlI ACTAGT 1 cut(s) 685
AjiI CACGTC 1 cut(s) 30
AjnI CCWGG 4 cut(s) 667, 753, 1557, 1631
AloI GAACNNNNNNTCC 2 cut(s) 1382, 1414
AluBI AGCT 8 cut(s) 114, 190, 420, 751, 788, 817, 944, 1126
AluI AGCT 8 cut(s) 114, 190, 420, 751, 788, 817, 944, 1126
Alw21I GWGCWC 4 cut(s) 116, 348, 422, 1175
Alw26I GTCTC 2 cut(s) 867, 1337
AlwI GGATC 4 cut(s) 249, 714, 1025, 1568
Ama87I CYCGRG 3 cut(s) 836, 1381, 1608
ApeKI GCWGC 3 cut(s) 104, 506, 733
ArsI GACNNNNNNTTYG 2 cut(s) 1192, 1224
Asp700I GAANNNNTTC 1 cut(s) 1007
AspLEI GCGC 1 cut(s) 939
AspS9I GGNCC 8 cut(s) 39, 307, 319, 447, 492, 597, 1438, 1616
AsuC2I CCSGG 2 cut(s) 314, 328
AsuHPI GGTGA 2 cut(s) 121, 1520
AvaI CYCGRG 3 cut(s) 836, 1381, 1608
AvaII GGWCC 5 cut(s) 39, 307, 597, 1438, 1616
AxyI CCTNAGG 1 cut(s) 1449
BalI TGGCCA 3 cut(s) 579, 1214, 1422
BanI GGYRCC 2 cut(s) 664, 696
BanII GRGCYC 2 cut(s) 116, 422
BauI CACGAG 1 cut(s) 90
BbrPI CACGTG 2 cut(s) 75, 1037
BbsI GAAGAC 1 cut(s) 1389
Bbv12I GWGCWC 4 cut(s) 116, 348, 422, 1175
BbvCI CCTCAGC 1 cut(s) 852
BbvI GCAGC 3 cut(s) 116, 493, 745
BccI CCATC 8 cut(s) 169, 569, 1217, 1348, 1352, 1431, 1499, 1666
BceAI ACGGC 2 cut(s) 186, 283
BciT130I CCWGG 4 cut(s) 669, 755, 1559, 1633
BclI TGATCA 1 cut(s) 511
BcnI CCSGG 2 cut(s) 314, 328
BcoDI GTCTC 2 cut(s) 867, 1337
BcuI ACTAGT 1 cut(s) 685
BfaI CTAG 3 cut(s) 521, 557, 686
BglI GCCNNNNNGGC 1 cut(s) 530
BglII AGATCT 2 cut(s) 1014, 1042
BlpI GCTNAGC 1 cut(s) 901
Bme1390I CCNGG 6 cut(s) 314, 328, 669, 755, 1559, 1633
Bme18I GGWCC 5 cut(s) 39, 307, 597, 1438, 1616
BmeRI GACNNNNNGTC 1 cut(s) 223
BmeT110I CYCGRG 3 cut(s) 836, 1381, 1608
BmgBI CACGTC 1 cut(s) 30
BmgT120I GGNCC 8 cut(s) 39, 307, 319, 447, 492, 597, 1438, 1616
BmiI GGNNCC 3 cut(s) 448, 666, 698
BmrFI CCNGG 6 cut(s) 314, 328, 669, 755, 1559, 1633
BmsI GCATC 3 cut(s) 14, 541, 542
BoxI GACNNNNGTC 1 cut(s) 372
BpiI GAAGAC 1 cut(s) 1389
BplI GAGNNNNNCTC 2 cut(s) 815, 847
BpmI CTGGAG 1 cut(s) 406
Bpu10I CCTNAGC 1 cut(s) 852
Bpu1102I GCTNAGC 1 cut(s) 901
BpuEI CTTGAG 4 cut(s) 797, 842, 1520, 1565
BpuMI CCSGG 2 cut(s) 314, 328
BsaAI YACGTR 2 cut(s) 75, 1037
BsaI GGTCTC 1 cut(s) 867
BsaJI CCNNGG 6 cut(s) 265, 282, 600, 1382, 1401, 1619
BsaWI WCCGGW 1 cut(s) 348
BsaXI ACNNNNNCTCC 4 cut(s) 49, 79, 93, 123
Bsc4I CCNNNNNNNGG 3 cut(s) 316, 327, 882
Bse118I RCCGGY 1 cut(s) 886
Bse1I ACTGG 4 cut(s) 863, 974, 1151, 1397
Bse21I CCTNAGG 1 cut(s) 1449
Bse3DI GCAATG 3 cut(s) 728, 775, 1239
BseBI CCWGG 4 cut(s) 669, 755, 1559, 1633
BseDI CCNNGG 6 cut(s) 265, 282, 600, 1382, 1401, 1619
BseGI GGATG 7 cut(s) 336, 400, 533, 970, 1363, 1423, 1510
BseLI CCNNNNNNNGG 3 cut(s) 316, 327, 882
BseMI GCAATG 3 cut(s) 728, 775, 1239
BseMII CTCAG 5 cut(s) 461, 843, 915, 1118, 1440
BseNI ACTGG 4 cut(s) 863, 974, 1151, 1397
BseRI GAGGAG 2 cut(s) 57, 1691
BseXI GCAGC 3 cut(s) 116, 493, 745
BshNI GGYRCC 2 cut(s) 664, 696
BsiHKAI GWGCWC 4 cut(s) 116, 348, 422, 1175
BsiHKCI CYCGRG 3 cut(s) 836, 1381, 1608
BsiSI CCGG 4 cut(s) 313, 328, 349, 887
BslFI GGGAC 1 cut(s) 1563
BslI CCNNNNNNNGG 3 cut(s) 316, 327, 882
BsmAI GTCTC 2 cut(s) 867, 1337
BsmFI GGGAC 1 cut(s) 1563
Bso31I GGTCTC 1 cut(s) 867
BsoBI CYCGRG 3 cut(s) 836, 1381, 1608
Bsp1286I GDGCHC 4 cut(s) 116, 348, 422, 1175
Bsp1407I TGTACA 1 cut(s) 478
Bsp1720I GCTNAGC 1 cut(s) 901
Bsp19I CCATGG 3 cut(s) 600, 1401, 1619
BspACI CCGC 9 cut(s) 33, 86, 107, 161, 164, 288, 317, 662, 1364
BspCNI CTCAG 5 cut(s) 462, 844, 914, 1119, 1441
BspLI GGNNCC 3 cut(s) 448, 666, 698
BspPI GGATC 4 cut(s) 249, 714, 1025, 1568
BspT107I GGYRCC 2 cut(s) 664, 696
BspTNI GGTCTC 1 cut(s) 867
BsrBI CCGCTC 1 cut(s) 1364
BsrDI GCAATG 3 cut(s) 728, 775, 1239
BsrFI RCCGGY 1 cut(s) 886
BsrGI TGTACA 1 cut(s) 478
BsrI ACTGG 4 cut(s) 863, 974, 1151, 1397
BssAI RCCGGY 1 cut(s) 886
BssECI CCNNGG 6 cut(s) 265, 282, 600, 1382, 1401, 1619
BssSI CACGAG 1 cut(s) 90
BssT1I CCWWGG 4 cut(s) 282, 600, 1401, 1619
Bst2BI CACGAG 1 cut(s) 90
Bst2UI CCWGG 4 cut(s) 669, 755, 1559, 1633
Bst4CI ACNGT 3 cut(s) 1247, 1375, 1527
Bst6I CTCTTC 1 cut(s) 128
BstAUI TGTACA 1 cut(s) 478
BstBAI YACGTR 2 cut(s) 75, 1037
BstC8I GCNNGC 2 cut(s) 436, 888
BstDEI CTNAG 7 cut(s) 470, 852, 901, 945, 999, 1127, 1449
BstDSI CCRYGG 4 cut(s) 265, 600, 1401, 1619
BstF5I GGATG 7 cut(s) 336, 400, 533, 970, 1363, 1423, 1510
BstHHI GCGC 1 cut(s) 939
BstMAI GTCTC 2 cut(s) 867, 1337
BstMWI GCNNNNNNNGC 7 cut(s) 161, 170, 179, 491, 506, 530, 671
BstNI CCWGG 4 cut(s) 669, 755, 1559, 1633
BstNSI RCATGY 2 cut(s) 262, 622
BstPAI GACNNNNGTC 1 cut(s) 372
BstSCI CCNGG 6 cut(s) 312, 326, 667, 753, 1557, 1631
BstV1I GCAGC 3 cut(s) 116, 493, 745
BstV2I GAAGAC 1 cut(s) 1389
BstX2I RGATCY 4 cut(s) 241, 706, 1014, 1042
BstXI CCANNNNNNTGG 1 cut(s) 430
BstYI RGATCY 4 cut(s) 241, 706, 1014, 1042
Bsu36I CCTNAGG 1 cut(s) 1449
BtgI CCRYGG 4 cut(s) 265, 600, 1401, 1619
BtgZI GCGATG 1 cut(s) 188
BtrI CACGTC 1 cut(s) 30
BtsCI GGATG 7 cut(s) 336, 400, 533, 970, 1363, 1423, 1510
BtsI GCAGTG 3 cut(s) 162, 189, 897
BtsIMutI CAGTG 5 cut(s) 162, 189, 897, 981, 1499
Cac8I GCNNGC 2 cut(s) 436, 888
CfoI GCGC 1 cut(s) 939
Cfr10I RCCGGY 1 cut(s) 886
Cfr13I GGNCC 8 cut(s) 39, 307, 319, 447, 492, 597, 1438, 1616
CsiI ACCWGGT 1 cut(s) 1557
Csp6I GTAC 5 cut(s) 479, 1106, 1303, 1378, 1681
CspCI CAANNNNNGTGG 2 cut(s) 1221, 1256
CviAII CATG 7 cut(s) 259, 601, 619, 693, 1325, 1402, 1620
CviQI GTAC 5 cut(s) 479, 1106, 1303, 1378, 1681
DdeI CTNAG 7 cut(s) 470, 852, 901, 945, 999, 1127, 1449
DriI GACNNNNNGTC 1 cut(s) 223
EaeI YGGCCR 4 cut(s) 577, 884, 1212, 1420
Eam1104I CTCTTC 1 cut(s) 128
Eam1105I GACNNNNNGTC 1 cut(s) 223
EarI CTCTTC 1 cut(s) 128
Ecl136II GAGCTC 2 cut(s) 114, 420
Eco130I CCWWGG 4 cut(s) 282, 600, 1401, 1619
Eco147I AGGCCT 2 cut(s) 519, 1631
Eco24I GRGCYC 2 cut(s) 116, 422
Eco31I GGTCTC 1 cut(s) 867
Eco32I GATATC 2 cut(s) 428, 844
Eco47I GGWCC 5 cut(s) 39, 307, 597, 1438, 1616
Eco53kI GAGCTC 2 cut(s) 114, 420
Eco57I CTGAAG 1 cut(s) 212
Eco72I CACGTG 2 cut(s) 75, 1037
Eco81I CCTNAGG 1 cut(s) 1449
Eco88I CYCGRG 3 cut(s) 836, 1381, 1608
EcoICRI GAGCTC 2 cut(s) 114, 420
EcoO109I RGGNCCY 1 cut(s) 1438
EcoRII CCWGG 4 cut(s) 667, 753, 1557, 1631
EcoRV GATATC 2 cut(s) 428, 844
EcoT14I CCWWGG 4 cut(s) 282, 600, 1401, 1619
EcoT38I GRGCYC 2 cut(s) 116, 422
ErhI CCWWGG 4 cut(s) 282, 600, 1401, 1619
FaeI CATG 7 cut(s) 262, 604, 622, 696, 1328, 1405, 1623
FalI AAGNNNNNCTT 6 cut(s) 521, 553, 908, 940, 992, 1024
FaqI GGGAC 1 cut(s) 1563
FatI CATG 7 cut(s) 258, 600, 618, 692, 1324, 1401, 1619
FbaI TGATCA 1 cut(s) 511
FokI GGATG 7 cut(s) 343, 407, 520, 957, 1370, 1410, 1517
FriOI GRGCYC 2 cut(s) 116, 422
FspBI CTAG 3 cut(s) 521, 557, 686
FspI TGCGCA 1 cut(s) 938
GlaI GCGC 1 cut(s) 938
GsuI CTGGAG 1 cut(s) 406
HapII CCGG 4 cut(s) 313, 328, 349, 887
HhaI GCGC 1 cut(s) 939
Hin1II CATG 7 cut(s) 262, 604, 622, 696, 1328, 1405, 1623
Hin6I GCGC 1 cut(s) 937
HinP1I GCGC 1 cut(s) 937
HinfI GANTC 6 cut(s) 221, 472, 824, 895, 1201, 1597
HpaII CCGG 4 cut(s) 313, 328, 349, 887
HphI GGTGA 2 cut(s) 121, 1520
Hpy166II GTNNAC 3 cut(s) 97, 1243, 1378
Hpy188I TCNGA 5 cut(s) 307, 367, 471, 721, 1123
Hpy188III TCNNGA 6 cut(s) 423, 572, 1012, 1198, 1441, 1544
Hpy8I GTNNAC 3 cut(s) 97, 1243, 1378
Hpy99I CGWCG 4 cut(s) 172, 221, 296, 341
HpyAV CCTTC 5 cut(s) 190, 953, 958, 1018, 1490
HpyCH4III ACNGT 3 cut(s) 1247, 1375, 1527
HpyCH4IV ACGT 4 cut(s) 29, 74, 294, 1036
HpyCH4V TGCA 7 cut(s) 262, 456, 733, 768, 1049, 1369, 1652
HpyF10VI GCNNNNNNNGC 7 cut(s) 161, 170, 179, 491, 506, 530, 671
HpyF3I CTNAG 7 cut(s) 470, 852, 901, 945, 999, 1127, 1449
HpySE526I ACGT 4 cut(s) 29, 74, 294, 1036
Hsp92II CATG 7 cut(s) 262, 604, 622, 696, 1328, 1405, 1623
HspAI GCGC 1 cut(s) 937
KroI GCCGGC 1 cut(s) 886
KroNI GCCGGC 1 cut(s) 888
Ksp22I TGATCA 1 cut(s) 511
LmnI GCTCC 9 cut(s) 101, 187, 351, 417, 425, 671, 756, 1123, 1361
Lsp1109I GCAGC 3 cut(s) 116, 493, 745
LweI GCATC 3 cut(s) 14, 541, 542
MabI ACCWGGT 1 cut(s) 1557
MaeI CTAG 3 cut(s) 521, 557, 686
MaeII ACGT 4 cut(s) 29, 74, 294, 1036
MaeIII GTNAC 3 cut(s) 688, 976, 1247
MbiI CCGCTC 1 cut(s) 1364
MfeI CAATTG 2 cut(s) 378, 451
MflI RGATCY 4 cut(s) 241, 706, 1014, 1042
MhlI GDGCHC 4 cut(s) 116, 348, 422, 1175
MlsI TGGCCA 3 cut(s) 579, 1214, 1422
MluCI AATT 4 cut(s) 378, 451, 581, 1512
MluNI TGGCCA 3 cut(s) 579, 1214, 1422
MlyI GAGTC 4 cut(s) 230, 481, 833, 1195
MmeI TCCRAC 1 cut(s) 285
Mox20I TGGCCA 3 cut(s) 579, 1214, 1422
MroNI GCCGGC 1 cut(s) 886
MroXI GAANNNNTTC 1 cut(s) 1007
MscI TGGCCA 3 cut(s) 579, 1214, 1422
MseI TTAA 4 cut(s) 915, 995, 1272, 1664
Msp20I TGGCCA 3 cut(s) 579, 1214, 1422
MspA1I CMGCKG 1 cut(s) 107
MspI CCGG 4 cut(s) 313, 328, 349, 887
MspR9I CCNGG 6 cut(s) 314, 328, 669, 755, 1559, 1633
MunI CAATTG 2 cut(s) 378, 451
MvaI CCWGG 4 cut(s) 669, 755, 1559, 1633
MwoI GCNNNNNNNGC 7 cut(s) 161, 170, 179, 491, 506, 530, 671
NaeI GCCGGC 1 cut(s) 888
NciI CCSGG 2 cut(s) 314, 328
NcoI CCATGG 3 cut(s) 600, 1401, 1619
NgoMIV GCCGGC 1 cut(s) 886
NlaIII CATG 7 cut(s) 262, 604, 622, 696, 1328, 1405, 1623
NlaIV GGNNCC 3 cut(s) 448, 666, 698
NmeAIII GCCGAG 1 cut(s) 232
NmuCI GTSAC 2 cut(s) 976, 1247
NsbI TGCGCA 1 cut(s) 938
NspI RCATGY 2 cut(s) 262, 622
PaeR7I CTCGAG 1 cut(s) 836
PceI AGGCCT 2 cut(s) 519, 1631
PcsI WCGNNNNNNNCGW 1 cut(s) 273
PdiI GCCGGC 1 cut(s) 888
PdmI GAANNNNTTC 1 cut(s) 1007
PfeI GAWTC 2 cut(s) 895, 1597
PfoI TCCNGGA 1 cut(s) 753
PleI GAGTC 4 cut(s) 229, 480, 832, 1195
PmaCI CACGTG 2 cut(s) 75, 1037
PmlI CACGTG 2 cut(s) 75, 1037
PpsI GAGTC 4 cut(s) 229, 480, 832, 1195
Ppu21I YACGTR 2 cut(s) 75, 1037
PpuMI RGGWCCY 1 cut(s) 1438
PshAI GACNNNNGTC 1 cut(s) 372
Psp124BI GAGCTC 2 cut(s) 116, 422
Psp5II RGGWCCY 1 cut(s) 1438
Psp6I CCWGG 4 cut(s) 667, 753, 1557, 1631
PspCI CACGTG 2 cut(s) 75, 1037
PspGI CCWGG 4 cut(s) 667, 753, 1557, 1631
PspN4I GGNNCC 3 cut(s) 448, 666, 698
PspPI GGNCC 8 cut(s) 39, 307, 319, 447, 492, 597, 1438, 1616
PspPPI RGGWCCY 1 cut(s) 1438
PspXI VCTCGAGB 1 cut(s) 836
PsrI GAACNNNNNNTAC 2 cut(s) 1127, 1159
PsuI RGATCY 4 cut(s) 241, 706, 1014, 1042
RsaI GTAC 5 cut(s) 480, 1107, 1304, 1379, 1682
RsaNI GTAC 5 cut(s) 479, 1106, 1303, 1378, 1681
SacI GAGCTC 2 cut(s) 116, 422
SaqAI TTAA 4 cut(s) 915, 995, 1272, 1664
Sau96I GGNCC 8 cut(s) 39, 307, 319, 447, 492, 597, 1438, 1616
SchI GAGTC 4 cut(s) 230, 481, 833, 1195
ScrFI CCNGG 6 cut(s) 314, 328, 669, 755, 1559, 1633
SduI GDGCHC 4 cut(s) 116, 348, 422, 1175
SexAI ACCWGGT 1 cut(s) 1557
SfaNI GCATC 3 cut(s) 14, 541, 542
Sfr274I CTCGAG 1 cut(s) 836
SinI GGWCC 5 cut(s) 39, 307, 597, 1438, 1616
SlaI CTCGAG 1 cut(s) 836
SmlI CTYRAG 5 cut(s) 812, 821, 836, 1499, 1544
SmoI CTYRAG 5 cut(s) 812, 821, 836, 1499, 1544
SpeI ACTAGT 1 cut(s) 685
Sse9I AATT 4 cut(s) 378, 451, 581, 1512
SseBI AGGCCT 2 cut(s) 519, 1631
SsiI CCGC 9 cut(s) 33, 86, 107, 161, 164, 288, 317, 662, 1364
SspI AATATT 1 cut(s) 1074
SspMI CTAG 3 cut(s) 521, 557, 686
SstI GAGCTC 2 cut(s) 116, 422
StuI AGGCCT 2 cut(s) 519, 1631
StyD4I CCNGG 6 cut(s) 312, 326, 667, 753, 1557, 1631
StyI CCWWGG 4 cut(s) 282, 600, 1401, 1619
TaaI ACNGT 3 cut(s) 1247, 1375, 1527
TaiI ACGT 4 cut(s) 32, 77, 297, 1039
TaqI TCGA 6 cut(s) 116, 336, 655, 837, 1520, 1595
TasI AATT 4 cut(s) 378, 451, 581, 1512
TatI WGTACW 2 cut(s) 478, 1680
TauI GCSGC 7 cut(s) 36, 89, 164, 167, 290, 320, 665
TfiI GAWTC 2 cut(s) 895, 1597
Tru1I TTAA 4 cut(s) 915, 995, 1272, 1664
Tru9I TTAA 4 cut(s) 915, 995, 1272, 1664
TscAI CASTG 5 cut(s) 162, 189, 897, 981, 1499
TseFI GTSAC 2 cut(s) 976, 1247
TseI GCWGC 3 cut(s) 104, 506, 733
Tsp45I GTSAC 2 cut(s) 976, 1247
TspDTI ATGAA 2 cut(s) 959, 1472
TspGWI ACGGA 3 cut(s) 114, 855, 1298
TspRI CASTG 5 cut(s) 162, 189, 897, 981, 1499
VpaK11BI GGWCC 5 cut(s) 39, 307, 597, 1438, 1616
XceI RCATGY 2 cut(s) 262, 622
XcmI CCANNNNNNNNNTGG 1 cut(s) 707
XhoI CTCGAG 1 cut(s) 836
XmnI GAANNNNTTC 1 cut(s) 1007
XspI CTAG 3 cut(s) 521, 557, 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.