Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G27950 |
| fragaria_vesca | FvH4_4g23670 |
| malus_domestica | MD16G1120100.v1.1 |
| prunus_persica | Prupe.1G225100_v2.0.a1 |
| pyrus_communis | pycom13g10450 pycom16g10260 |
| rosa_chinensis | RchiOBHm_Chr4g0430161 |
| rosa_laevigata | RLG00000007000 |
| rosa_multiflora | Rmu_sc0004036.1_g000011 |
| rosa_roxburghii | Rroxscaffold_5G00371950 |
| rosa_rugosa | Rorug04G0240900 |
| rosa_samantha | Rh4AG297700 Rh4BG304100 Rh4CG319600 Rh4DG301500 |
| rosa_wichuraiana | Rw4G025810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 61 |
| AcsI | RAATTY | 2 cut(s) | 84, 268 |
| AflIII | ACRYGT | 1 cut(s) | 112 |
| AgsI | TTSAA | 3 cut(s) | 46, 159, 256 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 130, 162 |
| AluBI | AGCT | 1 cut(s) | 168 |
| AluI | AGCT | 1 cut(s) | 168 |
| AlwI | GGATC | 1 cut(s) | 61 |
| AoxI | GGCC | 2 cut(s) | 30, 36 |
| ApoI | RAATTY | 2 cut(s) | 84, 268 |
| BfaI | CTAG | 1 cut(s) | 129 |
| BmsI | GCATC | 1 cut(s) | 141 |
| BsaBI | GATNNNNATC | 2 cut(s) | 209, 239 |
| BsaJI | CCNNGG | 1 cut(s) | 33 |
| Bse1I | ACTGG | 1 cut(s) | 250 |
| Bse8I | GATNNNNATC | 2 cut(s) | 209, 239 |
| BseDI | CCNNGG | 1 cut(s) | 33 |
| BseJI | GATNNNNATC | 2 cut(s) | 209, 239 |
| BseMII | CTCAG | 1 cut(s) | 93 |
| BseNI | ACTGG | 1 cut(s) | 250 |
| BshFI | GGCC | 2 cut(s) | 32, 38 |
| BsnI | GGCC | 2 cut(s) | 32, 38 |
| Bsp143I | GATC | 3 cut(s) | 53, 191, 240 |
| BspANI | GGCC | 2 cut(s) | 32, 38 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BspPI | GGATC | 1 cut(s) | 61 |
| BsrI | ACTGG | 1 cut(s) | 250 |
| BssECI | CCNNGG | 1 cut(s) | 33 |
| BssMI | GATC | 3 cut(s) | 53, 191, 240 |
| BstDEI | CTNAG | 1 cut(s) | 102 |
| BstKTI | GATC | 3 cut(s) | 56, 194, 243 |
| BstMBI | GATC | 3 cut(s) | 53, 191, 240 |
| BstNSI | RCATGY | 1 cut(s) | 116 |
| BsuRI | GGCC | 2 cut(s) | 32, 38 |
| CviAII | CATG | 1 cut(s) | 113 |
| CviJI | RGCY | 4 cut(s) | 32, 38, 168, 202 |
| CviKI_1 | RGCY | 4 cut(s) | 32, 38, 168, 202 |
| DdeI | CTNAG | 1 cut(s) | 102 |
| DpnI | GATC | 3 cut(s) | 55, 193, 242 |
| DpnII | GATC | 3 cut(s) | 53, 191, 240 |
| Eco147I | AGGCCT | 1 cut(s) | 38 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 1 cut(s) | 116 |
| FaiI | YATR | 7 cut(s) | 6, 24, 68, 79, 81, 114, 124 |
| FatI | CATG | 1 cut(s) | 112 |
| FauNDI | CATATG | 1 cut(s) | 79 |
| FspBI | CTAG | 1 cut(s) | 129 |
| HaeIII | GGCC | 2 cut(s) | 32, 38 |
| Hin1II | CATG | 1 cut(s) | 116 |
| Hpy188I | TCNGA | 4 cut(s) | 137, 196, 228, 278 |
| Hpy188III | TCNNGA | 2 cut(s) | 101, 171 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF3I | CTNAG | 1 cut(s) | 102 |
| Hsp92II | CATG | 1 cut(s) | 116 |
| Kzo9I | GATC | 3 cut(s) | 53, 191, 240 |
| LpnPI | CCDG | 4 cut(s) | 114, 129, 156, 263 |
| LweI | GCATC | 1 cut(s) | 141 |
| MaeI | CTAG | 1 cut(s) | 129 |
| MalI | GATC | 3 cut(s) | 55, 193, 242 |
| MboI | GATC | 3 cut(s) | 53, 191, 240 |
| MboII | GAAGA | 2 cut(s) | 201, 244 |
| MluCI | AATT | 5 cut(s) | 46, 84, 138, 220, 268 |
| MmeI | TCCRAC | 1 cut(s) | 97 |
| MnlI | CCTC | 1 cut(s) | 28 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 1 cut(s) | 185 |
| NdeI | CATATG | 1 cut(s) | 79 |
| NdeII | GATC | 3 cut(s) | 53, 191, 240 |
| NlaIII | CATG | 1 cut(s) | 116 |
| NmeAIII | GCCGAG | 1 cut(s) | 58 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 116 |
| PceI | AGGCCT | 1 cut(s) | 38 |
| PciI | ACATGT | 1 cut(s) | 112 |
| PscI | ACATGT | 1 cut(s) | 112 |
| SaqAI | TTAA | 1 cut(s) | 185 |
| Sau3AI | GATC | 3 cut(s) | 53, 191, 240 |
| SetI | ASST | 2 cut(s) | 148, 170 |
| SfaNI | GCATC | 1 cut(s) | 141 |
| SgeI | CNNG | 9 cut(s) | 40, 46, 113, 125, 141, 156, 183, 226, 262 |
| Sse9I | AATT | 5 cut(s) | 46, 84, 138, 220, 268 |
| SseBI | AGGCCT | 1 cut(s) | 38 |
| SspMI | CTAG | 1 cut(s) | 129 |
| StuI | AGGCCT | 1 cut(s) | 38 |
| TasI | AATT | 5 cut(s) | 46, 84, 138, 220, 268 |
| Tru1I | TTAA | 1 cut(s) | 185 |
| Tru9I | TTAA | 1 cut(s) | 185 |
| TspDTI | ATGAA | 3 cut(s) | 96, 221, 245 |
| XapI | RAATTY | 2 cut(s) | 84, 268 |
| XceI | RCATGY | 1 cut(s) | 116 |
| XspI | CTAG | 1 cut(s) | 129 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |