Rorug04G0278600

Chaperone protein DNAj

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0012609
Physical Location & Seq
Reverse (-)
45120090 .. 45125277
5188 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0278600.1

Sequence Viewer

Length: 1701 bp
ATGCAGGCCTCGCTTTCTCTCCCTACTCTCTCCCCCACCATTCCCAGATCAAACTACGTCGTTCAGTCCACGCTGCCTCTCGCTCCCTCCAAGCCGATCAATCTCCGCTTCTGCGGTCTCCGGCGAGAGGCCTTCGGGTTCTCCTCGCTCGGCCAGTCCGACTCGCACCGCGTCCGGCTCGCGGCGGCGTCGCGGTCCAAGAAGGTTTCGGCGGCCTTGTCTGGTAATGGAAGCGCTCCGAAGTCGTTCGACTACGACTTGCTCATCATCGGAGCCGGCGTCGGCGGCCACGGCGCTGCTCTCCACGCCGTCGAGAAGGGTCTGAAAACCGCCATCGTAGAGGGAGATGTGGTGGGTGGAACATGTGTTAATAGAGGATGTGTTCCATCTAAAGCTCTTCTTGCAGTGAGTGGTCGGATGCGGGAGCTTCAAAATGAACATCACCTTAAGGCTTTGGGTTTGCAGGTTTCAGCAGCTGGTTATGACAGACAGGGAGTGGCTGATCATGCAAACAATCTTGCATCAAAAATCCGTTCTAGTTTGACCAATTCAATGAAGTCGCTTGGAGTGGACATATTAACAGGTTTTGGTACAATCCTGGGCCCTCAAAAGGTGAAAGTTGGAGCATCGGACAAAGTAGTAACTGCAAAAAATATAATCATTGCCACTGGTTCTGTTCCTTTTGTTCCTAAGGGCATTGAAGTCGATGGGAAGACTGTGATTACGAGTGACCATGCACTCAAATTGGAGTCTGTTCCTGATTGGATTGCTATCGTTGGAAGTGGTTACATTGGCCTTGAGTTCAGTGATGTGTATACAGCACTTGGAAGTGAGGTTACTTTTATTGAAGCTTTGGATCAGCTTATGCCTGGTTTTGATCCTGAGATTGGGAAGTTAGCCCAAAGGGTTCTAATAAATCCACGAAGGATTGACTATCAAACTGGAGTATTTGCAAGCAAGATCACCCCAGCAAAGGATGGGAAACCAGTCATCATTGAACTAATTGATGCAAAGACTAAGGAACCGAGAGATACTCTAGAGGTAGATGCAGCATTAATTGCCACCGGAAGAGCCCCATTCACACACGGTCTTGGATTGGAGAATATTGATGTAGCAACACAACGTGGTTTTATTCCTGTTGATGAGCGCATGAGAGTAATAGATGCAAATGGCAAATTGGTTCCTCACCTGTTTTGCATTGGTGATGCCAACGGCAAGATGATGCTTGCTCATGCAGCAAGTGCACAAGGCATTTCAGTGGTTGAACAAGTCACAGGAAGAGACCACGTGCTCAACCATTTGAGCATCCCCGCGGCTTGCTTCACCCATCCTGAAATCAGTATGGTTGGATTGACAGAGCCCCAAGCAAGGGAGATGGCTAAGAAGGAGGGATTTGAAGTAAATATTGCCAAGACAAGCTTCAAGGCCAACACAAAGGCCCTAGCAGAAAATGAAGGAGAGGGACTTGCTAAGTTGATATACAGACCAGATAACGGAGAGATCCTTGGCGTTCATATCTTTGGATTGCATGCTGCAGACCTCATTCACGAGGCATCCAATGCAATAGCATTGGGAACACGCATTCAAGATCTCAAACTTGCTGTCCATGCACATCCTACCTTGTCTGAAGTGCTTGATGAACTTTTCAAGTCAGCAAAGGTTAAAGAGCATGTTTCTAGCCCTCAAGCAGTCGCAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005515 GO:0008092 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009958 GO:0050896
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

566

Amino Acids

59.91

Weight (kDa)

7.74

Isoelectric Point (pI)

28.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 85 - 417 5e-59 Pyridine nucleotide-disulphide oxidoreductase
GIDA PF01134 86 - 225 8.7e-06 Glucose inhibited division protein A
Pyr_redox PF00070 256 - 327 5.4e-14 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim PF02852 436 - 547 5.3e-31 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 454
AccI GTMKAC 1 cut(s) 815
AccII CGCG 4 cut(s) 171, 182, 193, 1313
AclWI GGATC 3 cut(s) 864, 872, 1495
AcoI YGGCCR 2 cut(s) 151, 286
AcuI CTGAAG 1 cut(s) 1647
AcvI CACGTG 1 cut(s) 1288
AcyI GRCGYC 2 cut(s) 188, 279
AdeI CACNNNGTG 1 cut(s) 1124
AfaI GTAC 1 cut(s) 592
AfeI AGCGCT 1 cut(s) 235
AfiI CCNNNNNNNGG 8 cut(s) 127, 181, 610, 887, 973, 1368, 1369, 1493
AflII CTTAAG 1 cut(s) 446
AflIII ACRYGT 1 cut(s) 362
AjnI CCWGG 2 cut(s) 597, 868
AjuI GAANNNNNNNTTGG 2 cut(s) 1403, 1435
AluBI AGCT 6 cut(s) 395, 427, 476, 851, 862, 1419
AluI AGCT 6 cut(s) 395, 427, 476, 851, 862, 1419
Alw21I GWGCWC 2 cut(s) 1246, 1293
Alw26I GTCTC 2 cut(s) 122, 1275
Alw44I GTGCAC 1 cut(s) 1242
AlwI GGATC 3 cut(s) 864, 872, 1495
AlwNI CAGNNNCTG 1 cut(s) 476
Aor51HI AGCGCT 1 cut(s) 235
AoxI GGCC 9 cut(s) 6, 129, 151, 213, 286, 601, 793, 1425, 1437
ApaI GGGCCC 1 cut(s) 605
ApaLI GTGCAC 1 cut(s) 1242
ApeKI GCWGC 6 cut(s) 73, 296, 473, 1049, 1235, 1532
ArsI GACNNNNNNTTYG 2 cut(s) 1587, 1619
AseI ATTAAT 1 cut(s) 1055
Asp700I GAANNNNTTC 1 cut(s) 245
AspLEI GCGC 3 cut(s) 236, 296, 1149
AspS9I GGNCC 4 cut(s) 195, 601, 602, 1438
AsuHPI GGTGA 6 cut(s) 434, 625, 955, 1178, 1214, 1315
AvaII GGWCC 1 cut(s) 195
AxyI CCTNAGG 1 cut(s) 690
BaeGI GKGCMC 2 cut(s) 605, 1246
BanII GRGCYC 3 cut(s) 605, 1075, 1362
BarI GAAGNNNNNNTAC 2 cut(s) 820, 852
BauI CACGAG 1 cut(s) 1547
BbrPI CACGTG 1 cut(s) 1288
BbsI GAAGAC 1 cut(s) 719
Bbv12I GWGCWC 2 cut(s) 1246, 1293
BbvI GCAGC 6 cut(s) 60, 283, 485, 1061, 1247, 1519
BccI CCATC 6 cut(s) 341, 394, 701, 971, 1335, 1369
BceAI ACGGC 3 cut(s) 293, 307, 1228
BcgI CGANNNNNNTGC 2 cut(s) 685, 719
BciT130I CCWGG 2 cut(s) 599, 870
BclI TGATCA 1 cut(s) 502
BcoDI GTCTC 2 cut(s) 122, 1275
BfaI CTAG 4 cut(s) 537, 1037, 1442, 1677
BfmI CTRYAG 1 cut(s) 1533
BfoI RGCGCY 2 cut(s) 237, 297
BfrI CTTAAG 1 cut(s) 446
BfuAI ACCTGC 1 cut(s) 454
BglII AGATCT 1 cut(s) 1588
Bme1390I CCNGG 2 cut(s) 599, 870
Bme18I GGWCC 1 cut(s) 195
BmgT120I GGNCC 4 cut(s) 195, 601, 602, 1438
BmiI GGNNCC 4 cut(s) 274, 603, 1023, 1182
BmrFI CCNGG 2 cut(s) 599, 870
BpiI GAAGAC 1 cut(s) 719
BplI GAGNNNNNCTC 2 cut(s) 1018, 1050
BpmI CTGGAG 1 cut(s) 963
BpuEI CTTGAG 2 cut(s) 818, 1668
BsaAI YACGTR 1 cut(s) 1288
BsaBI GATNNNNATC 1 cut(s) 770
BsaHI GRCGYC 2 cut(s) 188, 279
BsaI GGTCTC 2 cut(s) 122, 1275
BsaJI CCNNGG 4 cut(s) 289, 598, 1311, 1504
BsaWI WCCGGW 1 cut(s) 1064
BsaXI ACNNNNNCTCC 4 cut(s) 264, 294, 336, 366
Bsc4I CCNNNNNNNGG 8 cut(s) 127, 181, 610, 887, 973, 1368, 1369, 1493
Bse118I RCCGGY 1 cut(s) 275
Bse1I ACTGG 4 cut(s) 154, 673, 946, 986
Bse21I CCTNAGG 1 cut(s) 690
Bse3DI GCAATG 1 cut(s) 660
Bse8I GATNNNNATC 1 cut(s) 770
BseBI CCWGG 2 cut(s) 599, 870
BseDI CCNNGG 4 cut(s) 289, 598, 1311, 1504
BseGI GGATG 7 cut(s) 383, 423, 982, 1305, 1327, 1553, 1612
BseJI GATNNNNATC 1 cut(s) 770
BseLI CCNNNNNNNGG 8 cut(s) 127, 181, 610, 887, 973, 1368, 1369, 1493
BseMI GCAATG 1 cut(s) 660
BseMII CTCAG 1 cut(s) 873
BseNI ACTGG 4 cut(s) 154, 673, 946, 986
BseRI GAGGAG 1 cut(s) 133
BseSI GKGCMC 2 cut(s) 605, 1246
BseXI GCAGC 6 cut(s) 60, 283, 485, 1061, 1247, 1519
BseYI CCCAGC 1 cut(s) 967
Bsh1236I CGCG 4 cut(s) 171, 182, 193, 1313
BshFI GGCC 9 cut(s) 8, 131, 153, 215, 288, 603, 795, 1427, 1439
BsiHKAI GWGCWC 2 cut(s) 1246, 1293
BsiSI CCGG 4 cut(s) 121, 175, 276, 1065
BslFI GGGAC 1 cut(s) 1476
BslI CCNNNNNNNGG 8 cut(s) 127, 181, 610, 887, 973, 1368, 1369, 1493
BsmAI GTCTC 2 cut(s) 122, 1275
BsmFI GGGAC 1 cut(s) 1476
BsmI GAATGC 1 cut(s) 1581
BsnI GGCC 9 cut(s) 8, 131, 153, 215, 288, 603, 795, 1427, 1439
Bso31I GGTCTC 2 cut(s) 122, 1275
Bsp120I GGGCCC 1 cut(s) 601
Bsp1286I GDGCHC 5 cut(s) 605, 1075, 1246, 1293, 1362
Bsp143I GATC 8 cut(s) 47, 96, 502, 856, 877, 960, 1500, 1588
BspANI GGCC 9 cut(s) 8, 131, 153, 215, 288, 603, 795, 1427, 1439
BspCNI CTCAG 1 cut(s) 874
BspFNI CGCG 4 cut(s) 171, 182, 193, 1313
BspLI GGNNCC 4 cut(s) 274, 603, 1023, 1182
BspMAI CTGCAG 1 cut(s) 1537
BspMI ACCTGC 1 cut(s) 454
BspPI GGATC 3 cut(s) 864, 872, 1495
BspQI GCTCTTC 2 cut(s) 402, 1063
BspTI CTTAAG 1 cut(s) 446
BspTNI GGTCTC 2 cut(s) 122, 1275
BsrDI GCAATG 1 cut(s) 660
BsrFI RCCGGY 1 cut(s) 275
BsrI ACTGG 4 cut(s) 154, 673, 946, 986
BssAI RCCGGY 1 cut(s) 275
BssECI CCNNGG 4 cut(s) 289, 598, 1311, 1504
BssMI GATC 8 cut(s) 47, 96, 502, 856, 877, 960, 1500, 1588
BssNAI GTATAC 1 cut(s) 816
BssNI GRCGYC 2 cut(s) 188, 279
BssSI CACGAG 1 cut(s) 1547
BssT1I CCWWGG 1 cut(s) 1504
Bst1107I GTATAC 1 cut(s) 816
Bst2BI CACGAG 1 cut(s) 1547
Bst2UI CCWGG 2 cut(s) 599, 870
Bst4CI ACNGT 2 cut(s) 718, 1088
Bst6I CTCTTC 3 cut(s) 402, 1063, 1273
BstACI GRCGYC 2 cut(s) 188, 279
BstAFI CTTAAG 1 cut(s) 446
BstAPI GCANNNNNTGC 3 cut(s) 1058, 1241, 1559
BstBAI YACGTR 1 cut(s) 1288
BstC8I GCNNGC 7 cut(s) 6, 180, 277, 955, 1227, 1318, 1530
BstDEI CTNAG 5 cut(s) 690, 882, 1017, 1380, 1470
BstDSI CCRYGG 2 cut(s) 289, 1311
BstF5I GGATG 7 cut(s) 383, 423, 982, 1305, 1327, 1553, 1612
BstFNI CGCG 4 cut(s) 171, 182, 193, 1313
BstH2I RGCGCY 2 cut(s) 237, 297
BstHHI GCGC 3 cut(s) 236, 296, 1149
BstKTI GATC 8 cut(s) 50, 99, 505, 859, 880, 963, 1503, 1591
BstMAI GTCTC 2 cut(s) 122, 1275
BstMBI GATC 8 cut(s) 47, 96, 502, 856, 877, 960, 1500, 1588
BstNI CCWGG 2 cut(s) 599, 870
BstNSI RCATGY 3 cut(s) 366, 1532, 1673
BstSCI CCNGG 2 cut(s) 597, 868
BstSFI CTRYAG 1 cut(s) 1533
BstSLI GKGCMC 2 cut(s) 605, 1246
BstUI CGCG 4 cut(s) 171, 182, 193, 1313
BstV1I GCAGC 6 cut(s) 60, 283, 485, 1061, 1247, 1519
BstV2I GAAGAC 1 cut(s) 719
BstX2I RGATCY 2 cut(s) 1500, 1588
BstYI RGATCY 2 cut(s) 1500, 1588
BstZ17I GTATAC 1 cut(s) 816
Bsu36I CCTNAGG 1 cut(s) 690
BsuRI GGCC 9 cut(s) 8, 131, 153, 215, 288, 603, 795, 1427, 1439
BtgI CCRYGG 2 cut(s) 289, 1311
BtsCI GGATG 7 cut(s) 383, 423, 982, 1305, 1327, 1553, 1612
BtsI GCAGTG 1 cut(s) 411
BtsIMutI CAGTG 4 cut(s) 411, 666, 811, 1263
BveI ACCTGC 1 cut(s) 454
Cac8I GCNNGC 7 cut(s) 6, 180, 277, 955, 1227, 1318, 1530
CaiI CAGNNNCTG 1 cut(s) 476
CfoI GCGC 3 cut(s) 236, 296, 1149
Cfr10I RCCGGY 1 cut(s) 275
Cfr13I GGNCC 4 cut(s) 195, 601, 602, 1438
Cfr42I CCGCGG 1 cut(s) 1314
CseI GACGC 3 cut(s) 160, 177, 268
Csp6I GTAC 1 cut(s) 591
CviAII CATG 8 cut(s) 363, 506, 734, 1150, 1232, 1529, 1607, 1670
CviQI GTAC 1 cut(s) 591
DdeI CTNAG 5 cut(s) 690, 882, 1017, 1380, 1470
DpnI GATC 8 cut(s) 49, 98, 504, 858, 879, 962, 1502, 1590
DpnII GATC 8 cut(s) 47, 96, 502, 856, 877, 960, 1500, 1588
DraIII CACNNNGTG 1 cut(s) 1124
EaeI YGGCCR 2 cut(s) 151, 286
Eam1104I CTCTTC 3 cut(s) 402, 1063, 1273
EarI CTCTTC 3 cut(s) 402, 1063, 1273
Eco130I CCWWGG 1 cut(s) 1504
Eco147I AGGCCT 2 cut(s) 8, 131
Eco24I GRGCYC 3 cut(s) 605, 1075, 1362
Eco31I GGTCTC 2 cut(s) 122, 1275
Eco47I GGWCC 1 cut(s) 195
Eco47III AGCGCT 1 cut(s) 235
Eco57I CTGAAG 1 cut(s) 1647
Eco72I CACGTG 1 cut(s) 1288
Eco81I CCTNAGG 1 cut(s) 690
EcoO109I RGGNCCY 2 cut(s) 602, 1438
EcoRII CCWGG 2 cut(s) 597, 868
EcoT14I CCWWGG 1 cut(s) 1504
EcoT38I GRGCYC 3 cut(s) 605, 1075, 1362
ErhI CCWWGG 1 cut(s) 1504
FaeI CATG 8 cut(s) 366, 509, 737, 1153, 1235, 1532, 1610, 1673
FalI AAGNNNNNCTT 4 cut(s) 384, 416, 1403, 1435
FaqI GGGAC 1 cut(s) 1476
FatI CATG 8 cut(s) 362, 505, 733, 1149, 1231, 1528, 1606, 1669
FauI CCCGC 2 cut(s) 414, 1318
FbaI TGATCA 1 cut(s) 502
FblI GTMKAC 1 cut(s) 815
FokI GGATG 7 cut(s) 390, 430, 989, 1292, 1314, 1540, 1599
FriOI GRGCYC 3 cut(s) 605, 1075, 1362
FspBI CTAG 4 cut(s) 537, 1037, 1442, 1677
GlaI GCGC 3 cut(s) 235, 295, 1148
GsaI CCCAGC 1 cut(s) 971
GsuI CTGGAG 1 cut(s) 963
HaeII RGCGCY 2 cut(s) 237, 297
HaeIII GGCC 9 cut(s) 8, 131, 153, 215, 288, 603, 795, 1427, 1439
HapII CCGG 4 cut(s) 121, 175, 276, 1065
HgaI GACGC 3 cut(s) 160, 177, 268
HhaI GCGC 3 cut(s) 236, 296, 1149
Hin1I GRCGYC 2 cut(s) 188, 279
Hin1II CATG 8 cut(s) 366, 509, 737, 1153, 1235, 1532, 1610, 1673
Hin6I GCGC 3 cut(s) 234, 294, 1147
HinP1I GCGC 3 cut(s) 234, 294, 1147
HindIII AAGCTT 2 cut(s) 849, 1417
HinfI GANTC 2 cut(s) 161, 749
HpaII CCGG 4 cut(s) 121, 175, 276, 1065
HphI GGTGA 6 cut(s) 434, 625, 955, 1178, 1214, 1315
Hpy166II GTNNAC 4 cut(s) 69, 571, 816, 1244
Hpy188I TCNGA 7 cut(s) 160, 240, 272, 324, 417, 631, 1627
Hpy188III TCNNGA 7 cut(s) 313, 758, 881, 1037, 1331, 1547, 1586
Hpy8I GTNNAC 4 cut(s) 69, 571, 816, 1244
Hpy99I CGWCG 4 cut(s) 62, 193, 284, 314
HpyAV CCTTC 6 cut(s) 142, 196, 310, 918, 1378, 1448
HpyCH4III ACNGT 2 cut(s) 718, 1088
HpyCH4IV ACGT 3 cut(s) 57, 1123, 1287
HpyF3I CTNAG 5 cut(s) 690, 882, 1017, 1380, 1470
HpySE526I ACGT 3 cut(s) 57, 1123, 1287
Hsp92I GRCGYC 2 cut(s) 188, 279
Hsp92II CATG 8 cut(s) 366, 509, 737, 1153, 1235, 1532, 1610, 1673
HspAI GCGC 3 cut(s) 234, 294, 1147
KroI GCCGGC 1 cut(s) 275
KroNI GCCGGC 1 cut(s) 277
Ksp22I TGATCA 1 cut(s) 502
KspI CCGCGG 1 cut(s) 1314
Kzo9I GATC 8 cut(s) 47, 96, 502, 856, 877, 960, 1500, 1588
LguI GCTCTTC 2 cut(s) 402, 1063
LmnI GCTCC 5 cut(s) 88, 241, 272, 424, 623
Lsp1109I GCAGC 6 cut(s) 60, 283, 485, 1061, 1247, 1519
MaeI CTAG 4 cut(s) 537, 1037, 1442, 1677
MaeII ACGT 3 cut(s) 57, 1123, 1287
MaeIII GTNAC 5 cut(s) 640, 728, 785, 835, 1270
MalI GATC 8 cut(s) 49, 98, 504, 858, 879, 962, 1502, 1590
MboI GATC 8 cut(s) 47, 96, 502, 856, 877, 960, 1500, 1588
MboII GAAGA 4 cut(s) 389, 724, 1080, 1290
MflI RGATCY 2 cut(s) 1500, 1588
MhlI GDGCHC 5 cut(s) 605, 1075, 1246, 1293, 1362
MluCI AATT 5 cut(s) 547, 743, 1002, 1056, 1175
MlyI GAGTC 2 cut(s) 155, 758
MmeI TCCRAC 5 cut(s) 183, 395, 601, 757, 1327
MroNI GCCGGC 1 cut(s) 275
MroXI GAANNNNTTC 1 cut(s) 245
MseI TTAA 5 cut(s) 369, 447, 578, 1055, 1662
MslI CAYNNNNRTG 1 cut(s) 1256
MspA1I CMGCKG 2 cut(s) 476, 1313
MspCI CTTAAG 1 cut(s) 446
MspI CCGG 4 cut(s) 121, 175, 276, 1065
MspR9I CCNGG 2 cut(s) 599, 870
Mva1269I GAATGC 1 cut(s) 1581
MvaI CCWGG 2 cut(s) 599, 870
MvnI CGCG 4 cut(s) 171, 182, 193, 1313
NaeI GCCGGC 1 cut(s) 277
NdeII GATC 8 cut(s) 47, 96, 502, 856, 877, 960, 1500, 1588
NgoMIV GCCGGC 1 cut(s) 275
NlaIII CATG 8 cut(s) 366, 509, 737, 1153, 1235, 1532, 1610, 1673
NlaIV GGNNCC 4 cut(s) 274, 603, 1023, 1182
NmeAIII GCCGAG 1 cut(s) 129
NmuCI GTSAC 2 cut(s) 728, 1270
NspI RCATGY 3 cut(s) 366, 1532, 1673
PaeI GCATGC 1 cut(s) 1532
PceI AGGCCT 2 cut(s) 8, 131
PciI ACATGT 1 cut(s) 362
PciSI GCTCTTC 2 cut(s) 402, 1063
PcsI WCGNNNNNNNCGW 2 cut(s) 156, 276
PctI GAATGC 1 cut(s) 1581
PdiI GCCGGC 1 cut(s) 277
PdmI GAANNNNTTC 1 cut(s) 245
PleI GAGTC 2 cut(s) 155, 757
PmaCI CACGTG 1 cut(s) 1288
PmlI CACGTG 1 cut(s) 1288
PpsI GAGTC 2 cut(s) 155, 757
Ppu21I YACGTR 1 cut(s) 1288
PscI ACATGT 1 cut(s) 362
PshBI ATTAAT 1 cut(s) 1055
Psp6I CCWGG 2 cut(s) 597, 868
PspCI CACGTG 1 cut(s) 1288
PspFI CCCAGC 1 cut(s) 967
PspGI CCWGG 2 cut(s) 597, 868
PspN4I GGNNCC 4 cut(s) 274, 603, 1023, 1182
PspOMI GGGCCC 1 cut(s) 601
PspPI GGNCC 4 cut(s) 195, 601, 602, 1438
PstI CTGCAG 1 cut(s) 1537
PstNI CAGNNNCTG 1 cut(s) 476
PsuI RGATCY 2 cut(s) 1500, 1588
PvuII CAGCTG 1 cut(s) 476
RsaI GTAC 1 cut(s) 592
RsaNI GTAC 1 cut(s) 591
RseI CAYNNNNRTG 1 cut(s) 1256
SacII CCGCGG 1 cut(s) 1314
SapI GCTCTTC 2 cut(s) 402, 1063
SaqAI TTAA 5 cut(s) 369, 447, 578, 1055, 1662
Sau3AI GATC 8 cut(s) 47, 96, 502, 856, 877, 960, 1500, 1588
Sau96I GGNCC 4 cut(s) 195, 601, 602, 1438
SchI GAGTC 2 cut(s) 155, 758
ScrFI CCNGG 2 cut(s) 599, 870
SduI GDGCHC 5 cut(s) 605, 1075, 1246, 1293, 1362
SfcI CTRYAG 1 cut(s) 1533
Sfr303I CCGCGG 1 cut(s) 1314
SgrBI CCGCGG 1 cut(s) 1314
SinI GGWCC 1 cut(s) 195
SmiMI CAYNNNNRTG 1 cut(s) 1256
SmlI CTYRAG 3 cut(s) 446, 797, 1683
SmoI CTYRAG 3 cut(s) 446, 797, 1683
SphI GCATGC 1 cut(s) 1532
Sse9I AATT 5 cut(s) 547, 743, 1002, 1056, 1175
SseBI AGGCCT 2 cut(s) 8, 131
SspI AATATT 2 cut(s) 1105, 1405
SspMI CTAG 4 cut(s) 537, 1037, 1442, 1677
StuI AGGCCT 2 cut(s) 8, 131
StyD4I CCNGG 2 cut(s) 597, 868
StyI CCWWGG 1 cut(s) 1504
TaaI ACNGT 2 cut(s) 718, 1088
TaiI ACGT 3 cut(s) 60, 1126, 1290
TaqI TCGA 3 cut(s) 249, 312, 705
TasI AATT 5 cut(s) 547, 743, 1002, 1056, 1175
TauI GCSGC 5 cut(s) 185, 188, 215, 288, 1316
Tru1I TTAA 5 cut(s) 369, 447, 578, 1055, 1662
Tru9I TTAA 5 cut(s) 369, 447, 578, 1055, 1662
TscAI CASTG 4 cut(s) 411, 673, 811, 1263
TseFI GTSAC 2 cut(s) 728, 1270
TseI GCWGC 6 cut(s) 73, 296, 473, 1049, 1235, 1532
Tsp45I GTSAC 2 cut(s) 728, 1270
TspDTI ATGAA 5 cut(s) 450, 569, 1467, 1502, 1653
TspGWI ACGGA 2 cut(s) 521, 1509
TspRI CASTG 4 cut(s) 411, 673, 811, 1263
Vha464I CTTAAG 1 cut(s) 446
VneI GTGCAC 1 cut(s) 1242
VpaK11BI GGWCC 1 cut(s) 195
VspI ATTAAT 1 cut(s) 1055
XbaI TCTAGA 1 cut(s) 1036
XceI RCATGY 3 cut(s) 366, 1532, 1673
XmiI GTMKAC 1 cut(s) 815
XmnI GAANNNNTTC 1 cut(s) 245
XspI CTAG 4 cut(s) 537, 1037, 1442, 1677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.