Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G68850 |
| fragaria_vesca | FvH4_4g28690 |
| malus_domestica | MD13G1053000.v1.1 MD16G1052000.v1.1 |
| prunus_persica | Prupe.1G299000_v2.0.a1 |
| pyrus_communis | pycom13g04750 pycom16g04570 |
| rosa_chinensis | RchiOBHm_Chr4g0436811 |
| rosa_laevigata | RLG00000006495 |
| rosa_multiflora | Rmu_sc0001837.1_g000013 |
| rosa_roxburghii | Rroxscaffold_5G00377870 |
| rosa_rugosa | Rorug04G0296400 |
| rosa_samantha | Rh4AG350700 Rh4BG359700 Rh4CG374000 Rh4DG353600 |
| rosa_wichuraiana | Rw4G030690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 410 |
| AciI | CCGC | 1 cut(s) | 86 |
| AclI | AACGTT | 1 cut(s) | 407 |
| AcsI | RAATTY | 1 cut(s) | 228 |
| AcuI | CTGAAG | 2 cut(s) | 123, 474 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 410 |
| AgsI | TTSAA | 5 cut(s) | 61, 71, 241, 385, 430 |
| AluBI | AGCT | 3 cut(s) | 67, 478, 523 |
| AluI | AGCT | 3 cut(s) | 67, 478, 523 |
| ApoI | RAATTY | 1 cut(s) | 228 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 389 |
| AspS9I | GGNCC | 1 cut(s) | 436 |
| AsuHPI | GGTGA | 1 cut(s) | 559 |
| AvaII | GGWCC | 1 cut(s) | 436 |
| BbsI | GAAGAC | 1 cut(s) | 135 |
| BccI | CCATC | 2 cut(s) | 566, 726 |
| BclI | TGATCA | 1 cut(s) | 582 |
| BfaI | CTAG | 2 cut(s) | 27, 662 |
| Bme18I | GGWCC | 1 cut(s) | 436 |
| BmgT120I | GGNCC | 1 cut(s) | 436 |
| BpiI | GAAGAC | 1 cut(s) | 135 |
| BpuEI | CTTGAG | 1 cut(s) | 404 |
| Bsa29I | ATCGAT | 1 cut(s) | 288 |
| BsaBI | GATNNNNATC | 1 cut(s) | 576 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 512, 542 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 410 |
| Bse3DI | GCAATG | 1 cut(s) | 706 |
| Bse8I | GATNNNNATC | 1 cut(s) | 576 |
| BseCI | ATCGAT | 1 cut(s) | 288 |
| BseGI | GGATG | 2 cut(s) | 150, 680 |
| BseJI | GATNNNNATC | 1 cut(s) | 576 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 410 |
| BseMI | GCAATG | 1 cut(s) | 706 |
| BseRI | GAGGAG | 1 cut(s) | 146 |
| BshVI | ATCGAT | 1 cut(s) | 288 |
| BslFI | GGGAC | 1 cut(s) | 609 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 410 |
| BsmFI | GGGAC | 1 cut(s) | 609 |
| BsmI | GAATGC | 1 cut(s) | 619 |
| Bsp143I | GATC | 4 cut(s) | 172, 376, 582, 643 |
| BspACI | CCGC | 1 cut(s) | 86 |
| BspDI | ATCGAT | 1 cut(s) | 288 |
| BsrDI | GCAATG | 1 cut(s) | 706 |
| BssMI | GATC | 4 cut(s) | 172, 376, 582, 643 |
| Bst4CI | ACNGT | 2 cut(s) | 57, 607 |
| Bst6I | CTCTTC | 1 cut(s) | 66 |
| BstC8I | GCNNGC | 1 cut(s) | 651 |
| BstF5I | GGATG | 2 cut(s) | 150, 680 |
| BstKTI | GATC | 4 cut(s) | 175, 379, 585, 646 |
| BstMBI | GATC | 4 cut(s) | 172, 376, 582, 643 |
| BstV2I | GAAGAC | 1 cut(s) | 135 |
| Bsu15I | ATCGAT | 1 cut(s) | 288 |
| BsuTUI | ATCGAT | 1 cut(s) | 288 |
| BtsCI | GGATG | 2 cut(s) | 150, 680 |
| Cac8I | GCNNGC | 1 cut(s) | 651 |
| Cfr13I | GGNCC | 1 cut(s) | 436 |
| ClaI | ATCGAT | 1 cut(s) | 288 |
| CviAII | CATG | 1 cut(s) | 671 |
| CviJI | RGCY | 8 cut(s) | 25, 67, 107, 143, 184, 478, 523, 649 |
| CviKI_1 | RGCY | 8 cut(s) | 25, 67, 107, 143, 184, 478, 523, 649 |
| DpnI | GATC | 4 cut(s) | 174, 378, 584, 645 |
| DpnII | GATC | 4 cut(s) | 172, 376, 582, 643 |
| Eam1104I | CTCTTC | 1 cut(s) | 66 |
| EarI | CTCTTC | 1 cut(s) | 66 |
| Eco32I | GATATC | 1 cut(s) | 78 |
| Eco47I | GGWCC | 1 cut(s) | 436 |
| Eco57I | CTGAAG | 2 cut(s) | 123, 474 |
| EcoRV | GATATC | 1 cut(s) | 78 |
| FaeI | CATG | 1 cut(s) | 674 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 698, 730 |
| FaqI | GGGAC | 1 cut(s) | 609 |
| FatI | CATG | 1 cut(s) | 670 |
| FbaI | TGATCA | 1 cut(s) | 582 |
| FokI | GGATG | 2 cut(s) | 137, 667 |
| FspBI | CTAG | 2 cut(s) | 27, 662 |
| Hin1II | CATG | 1 cut(s) | 674 |
| HindIII | AAGCTT | 1 cut(s) | 476 |
| HinfI | GANTC | 3 cut(s) | 193, 415, 665 |
| HphI | GGTGA | 1 cut(s) | 559 |
| Hpy166II | GTNNAC | 2 cut(s) | 220, 550 |
| Hpy188I | TCNGA | 7 cut(s) | 177, 198, 265, 368, 493, 582, 723 |
| Hpy188III | TCNNGA | 3 cut(s) | 100, 170, 662 |
| Hpy8I | GTNNAC | 2 cut(s) | 220, 550 |
| HpyAV | CCTTC | 2 cut(s) | 97, 461 |
| HpyCH4III | ACNGT | 2 cut(s) | 57, 607 |
| HpyCH4IV | ACGT | 1 cut(s) | 407 |
| HpyCH4V | TGCA | 2 cut(s) | 619, 653 |
| HpySE526I | ACGT | 1 cut(s) | 407 |
| Hsp92II | CATG | 1 cut(s) | 674 |
| Ksp22I | TGATCA | 1 cut(s) | 582 |
| Kzo9I | GATC | 4 cut(s) | 172, 376, 582, 643 |
| LmnI | GCTCC | 1 cut(s) | 520 |
| LpnPI | CCDG | 3 cut(s) | 24, 503, 577 |
| MaeI | CTAG | 2 cut(s) | 27, 662 |
| MaeII | ACGT | 1 cut(s) | 407 |
| MaeIII | GTNAC | 2 cut(s) | 161, 513 |
| MalI | GATC | 4 cut(s) | 174, 378, 584, 645 |
| MboI | GATC | 4 cut(s) | 172, 376, 582, 643 |
| MboII | GAAGA | 6 cut(s) | 42, 83, 129, 140, 516, 718 |
| MfeI | CAATTG | 1 cut(s) | 425 |
| MluCI | AATT | 5 cut(s) | 228, 372, 425, 567, 614 |
| MnlI | CCTC | 5 cut(s) | 125, 164, 167, 449, 694 |
| MroXI | GAANNNNTTC | 1 cut(s) | 389 |
| MseI | TTAA | 4 cut(s) | 357, 480, 533, 692 |
| MunI | CAATTG | 1 cut(s) | 425 |
| Mva1269I | GAATGC | 1 cut(s) | 619 |
| NdeII | GATC | 4 cut(s) | 172, 376, 582, 643 |
| NlaIII | CATG | 1 cut(s) | 674 |
| NmuCI | GTSAC | 1 cut(s) | 161 |
| PctI | GAATGC | 1 cut(s) | 619 |
| PdmI | GAANNNNTTC | 1 cut(s) | 389 |
| PfeI | GAWTC | 3 cut(s) | 193, 415, 665 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 410 |
| Psp1406I | AACGTT | 1 cut(s) | 407 |
| PspPI | GGNCC | 1 cut(s) | 436 |
| SaqAI | TTAA | 4 cut(s) | 357, 480, 533, 692 |
| Sau3AI | GATC | 4 cut(s) | 172, 376, 582, 643 |
| Sau96I | GGNCC | 1 cut(s) | 436 |
| SetI | ASST | 8 cut(s) | 69, 135, 410, 441, 472, 480, 525, 737 |
| SinI | GGWCC | 1 cut(s) | 436 |
| SmlI | CTYRAG | 1 cut(s) | 419 |
| SmoI | CTYRAG | 1 cut(s) | 419 |
| Sse9I | AATT | 5 cut(s) | 228, 372, 425, 567, 614 |
| SsiI | CCGC | 1 cut(s) | 86 |
| SspMI | CTAG | 2 cut(s) | 27, 662 |
| TaaI | ACNGT | 2 cut(s) | 57, 607 |
| TaiI | ACGT | 1 cut(s) | 410 |
| TaqI | TCGA | 3 cut(s) | 99, 288, 612 |
| TasI | AATT | 5 cut(s) | 228, 372, 425, 567, 614 |
| TfiI | GAWTC | 3 cut(s) | 193, 415, 665 |
| Tru1I | TTAA | 4 cut(s) | 357, 480, 533, 692 |
| Tru9I | TTAA | 4 cut(s) | 357, 480, 533, 692 |
| TseFI | GTSAC | 1 cut(s) | 161 |
| Tsp45I | GTSAC | 1 cut(s) | 161 |
| TspDTI | ATGAA | 5 cut(s) | 141, 359, 435, 647, 669 |
| TspGWI | ACGGA | 1 cut(s) | 149 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 410 |
| VpaK11BI | GGWCC | 1 cut(s) | 436 |
| XapI | RAATTY | 1 cut(s) | 228 |
| XbaI | TCTAGA | 1 cut(s) | 661 |
| XmnI | GAANNNNTTC | 1 cut(s) | 389 |
| XspI | CTAG | 2 cut(s) | 27, 662 |