Rorug04G0331500

F-box protein At3g07870-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
50576832 .. 50584392
7561 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0331500.1

Sequence Viewer

Length: 3666 bp
ATGCCTCCTTCTCCGGCATTGAGGTCCTCTCCGGGCCGAGAGCCGAGAGGGAATCAGCATAGACGAGGTAGGAGTTTCGAGAGTGGAATGATTGTGAGAGGGAAAGATGAAGATCTTGCTTTGTTCAACGAAATGCAGACCCGAGAGAAAGAGGATTTCTTGCTTCAGTCGGATGATCTTGAAGACACATTTTCTACGAAATTGAGGCAATTTTCGGATTTCAAGCTGGGAATCGCCATTCCTACTCGGGGGGAGAGCAGTGACTTGCTTAATGCGGAAGAAGAGAAAAATGACTACGAGTGGTTATTAACGCCTCCCGACACTCCTCTTTTTCCATCCTTGGATGATGAGCCACCACCAGTTACTACGGTACAGAGGGGGAGACCTCGAAGTCAACCTATTTCTATATCAAGATCATCCACGATGGAGAAGAGTTACCGAAGCAGCAGGGGTAGTGCTAGTCCCAGTCGCCTAAGCCCATCTCCTCGTTCCGGGAATAGTACATTACAGTCAAGAGGAAGGCCATCATCAGCACGCAACTCCAGTCCTACCCCAAGTCTACGTCCTGCTTCTCCCTCACATCTTGCTACTCCATCACGTTCAGCTACTTCATCACGTCCTGGTACTCCATCACGGAGACCATCTACTCCCCCTAGTAAATCCCCATCCCCTGCTCCAAGGTCTTCTACCCCTACTCCCAGGAGGATGAGCACTGGGTCCAGTAGTACTGTGGCTCCACCGGGGAGAAGGGGGACTTCTCCTGTAACGACAAGTAGAGGGAACTCTGCATCACCGAAAATAAAAGCATGGCAAACAAATATTCCAGGCTTCTCCAGTGATGCACCTCCCAACCTTCGCACTTCTCTTGCTGATCGACCGGCAACATATGTGAGGGGTTCCTCTCCAGCATCTAGAAGTGGGAGGGGTTCCTCACCCGCATCTGGATACAGAAGGCAATCAATGTCTCCAACTGCTTCAAGAAGTGTCAGTTCATCTCATAGTCATGATAGAGACCCGTTTAGTTCTCAGAGCAAAGGTTCTATTGCCTCTTCTGGTGACGATGATCTGGACTCTCTGCAATCTCTTCCTGTGGGCAGTTTAGACAGATCAACTCCGAAAAGAGTTTCAGCTTTCTCAAACAACAGAGCTGTGGCGTTCTCAAAGAAATCGGCCAAACTGGTGTCCTCATCTTCTGCTCCAAAAAGATCTTTTGATTCTGCCATTCGACAAATGGATCATCGGAAAACCCCTCAAAACATGTTCAGGCCACTCTTGTCCAGTGTTCCGAGTAGCACCTTCTATGTTGGAAAATCAAGTTCTGTGCATCGTCCTCTGATTTCCAGGAACTCCTCAGTCACAACTAGCAGCAATGCAAGTTCTGATATAGGTACAAGTGTTGCACCTGATACTGAAGGGAGTGATCACAACCAGGATGATATGGCTATTGAGTCTGAGAAGGTGCCATACTCTGATGGTCATGACGAAGTCTTTGCCTTTGATAAGATGGATGTAGTGAATGAAGGCACTGGGCATGATAGCCATGATGGATCACACGACGTTGATGACATTGAATTCACTAGAAGTTCTACAGTTGAGTATTCTGGCCATCCCAATATCATGATGGAAGTCAGTCAAACTTCTGAAGATCCTCATGTTAAGGGTGATTTTTCTGAAATCGATAGTTTAGAAGACATGGAACTTTGTTTGAAATGTGGGTGCAAGTACTATGTTTCTAATGAGGTGGAAAGGAAAATTAGACTTTGTCCAGAATGCAGTAGGAAAGATAAACTTCTGAGTGTCCTGATTCTGGAGAGAGATGTAGTTCCTGAAAACTCCTCACCTTTGTCTGTAAAAAATTTGGAAGAAGAAAAGCCTTTAGATGCAATGGAACCAGTGATAGTTGTACCTGGATCTCCACAGGTGACTCATCTGGAGAAATCAAAGAATTCCCATGGTGAAGAGAAGGCTGATCAAGGCCAAATTACCTACAATGAGCGAATCCATAATGGCTTAGAAGAAAATTCTCTTGCAATGCCATTTGTCAAGGGTGGTGAGGATGGGCTTTCCAAGCAGCAAGAGGCGCGCTCATTATCTGTTGGTGGTGGTCCACCTAATAGTGACACTGGCGGTCAGAAATTATATCATTCTAACAACTATTCAAAGATGAGGGATGACATTTCAGAAGGTACAGGCATTTCCATACTGCTGAAGAGGACTAGCAGTAGCAAGGGGGCTGCTTTTCAGGGTAGGACTTTCACAGCCGCTGCCATACCTTATGAGGATCTGTCATATGCTAGAGATAGTTCAAACAGTATGAGAAGCTCCATTGGGCATGGAACTTTCTCTGCTTCATCTTCAGTTGATTTTAGTCCAGCTAGACAAACGGAGGCTCGTGTCCAGCGGCAGTTGAGTGGCAAGAAATCAGAAATGGAAACTCACAGACAGGATACAAACATGAAGCCTCAAAGCATTGGGTTATCAGACATGGAGATTCTTAGACATGATACAAGCATGAAGCACCAAAGAGTTAGGTCATCTTCCTATGGACTTCCAAACTATTCTCATGAAGCGTTGGGTCTTTCTTCAGACACAATTGATGACGAGGGTACTGTTAATAATGGGGAATATGATGTTTCGGATGGTACGCACACAACATCTGAAGAACACTTGCCAACTTCAGACTGTATGGAAGCAGATGGTACCACAACTTCTACCAGAACAACTGCTGTAGAAGAGGATGAGGAAATCACTGTTAGAAGTACAAGAGTTGATGCTTCTACTTCAGAACTGTCGAGCCATGCAGCGAACAGTTTGTTAGAGAACAATACAGTAGCAATGTTTCCCAATTGTGAAAATTGTACTTCAAATGGATACAGTGAAGACTTGCAAAACAACGTGAGGAGTGCCACAAATATAGAAGTATCAGCTATAGATCCTGAGTCTTCATTGAACGAGGAAGATATCATCCAAAACAGTAGGGTTAATGGAGTGGATGTTGAAGAGATCACTAATCACAGCTCTGTGATTACAGTATCTGAAATAGGAATTGAAAGGGGTCATCACAGCACCTCTGGTTCCAGTAGCGATGATGCTTCACTTGAATCAAAGAGTACCATGGAGGAGGTTCACGAGCCTTCAATTCCAAATCTTTCTGACAGTAGTCTGACATCTTCTATTCCAGAGATCAACACCACCAATAATGCACATTGCATCCTAGAAGAGGAATCAACAGTAATGGTAGAGTCTCAAGGCCGAAGCAGGGGAAGAAGCCTTACACTAGAAGAGGCAACTGATACGATACTCTTATGCAGCTCCATTGTCCATGATCTGGCCTACCAGGCTGCAACAATAGCAATAGAAAAGGAGCAGTCAGTACCATTAGAAGGTTCACAGCCTACAGTTACAATATTGGGGAAATCCAATCCCGAGAGAAAGGAATCACGTGGCAGAACCATCAGTAGACGCTCTGTAAAATCTCAGAAGGGTAGGCAAAAGCGGATGGAAACAGATGCAGGACCCCCTGCAAGTAAGACTGAGAATGACGAGAATGAGAATGAGAATGTTGATGAGTCTTTGCAACAACGCCCTGTAGGGCTTCCTCCTAACAAGGCAGACGGCATGAAGCCCCCAAAGCTGGAGTCCAAGTGCAACTGCACGATAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1221

Amino Acids

132.44

Weight (kDa)

5.52

Isoelectric Point (pI)

67.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011996)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 390
Acc65I GGTACC 1 cut(s) 2699
AccB1I GGYRCC 2 cut(s) 1459, 2699
AccB7I CCANNNNNTGG 1 cut(s) 3328
AccI GTMKAC 2 cut(s) 559, 3460
AccII CGCG 1 cut(s) 2083
AciI CCGC 6 cut(s) 275, 936, 2127, 2262, 2401, 3496
AclWI GGATC 6 cut(s) 1242, 1555, 1640, 1918, 2289, 2927
AcoI YGGCCR 2 cut(s) 1170, 1603
AcsI RAATTY 4 cut(s) 1571, 1855, 1945, 2020
AcuI CTGAAG 9 cut(s) 149, 1431, 1662, 2228, 2340, 2568, 2661, 2679, 2766
AcvI CACGTG 1 cut(s) 3443
AfiI CCNNNNNNNGG 9 cut(s) 248, 491, 941, 1807, 3220, 3259, 3328, 3383, 3634
AflIII ACRYGT 1 cut(s) 1257
AjiI CACGTC 1 cut(s) 617
AjnI CCWGG 7 cut(s) 619, 698, 823, 1340, 1428, 1906, 3336
Alw21I GWGCWC 1 cut(s) 713
Alw26I GTCTC 5 cut(s) 376, 631, 969, 1005, 3249
AlwI GGATC 6 cut(s) 1242, 1555, 1640, 1918, 2289, 2927
AlwNI CAGNNNCTG 2 cut(s) 2264, 3035
Ama87I CYCGRG 3 cut(s) 141, 246, 3425
AoxI GGCC 8 cut(s) 34, 521, 1170, 1265, 1603, 1975, 3250, 3330
ApeKI GCWGC 8 cut(s) 444, 1365, 2071, 2234, 2264, 2801, 3309, 3341
ApoI RAATTY 4 cut(s) 1571, 1855, 1945, 2020
ArsI GACNNNNNNTTYG 4 cut(s) 1472, 1504, 3623, 3655
Asp718I GGTACC 1 cut(s) 2699
AspLEI GCGC 2 cut(s) 2083, 2085
AspS9I GGNCC 5 cut(s) 24, 34, 717, 2105, 3515
AsuC2I CCSGG 3 cut(s) 33, 493, 741
AsuHPI GGTGA 8 cut(s) 783, 924, 1067, 1673, 1830, 1933, 1967, 2063
AvaI CYCGRG 3 cut(s) 141, 246, 3425
AvaII GGWCC 4 cut(s) 24, 717, 2105, 3515
BaeI ACNNNNGTAYC 2 cut(s) 1380, 1413
BalI TGGCCA 1 cut(s) 1605
BanI GGYRCC 2 cut(s) 1459, 2699
BarI GAAGNNNNNNTAC 6 cut(s) 1448, 1480, 2692, 2724, 3256, 3288
BauI CACGAG 2 cut(s) 2391, 3128
BbrPI CACGTG 1 cut(s) 3443
BbsI GAAGAC 5 cut(s) 189, 675, 1695, 2886, 2934
Bbv12I GWGCWC 1 cut(s) 713
BbvI GCAGC 8 cut(s) 456, 1377, 2083, 2221, 2251, 2813, 3321, 3328
BceAI ACGGC 1 cut(s) 3631
BcgI CGANNNNNNTGC 2 cut(s) 1472, 1506
BciT130I CCWGG 7 cut(s) 621, 700, 825, 1342, 1430, 1908, 3338
BciVI GTATCC 3 cut(s) 938, 2440, 2864
BclI TGATCA 2 cut(s) 1420, 1969
BcnI CCSGG 3 cut(s) 33, 493, 741
BcoDI GTCTC 5 cut(s) 376, 631, 969, 1005, 3249
BfmI CTRYAG 5 cut(s) 1587, 2727, 2928, 3396, 3588
BfuI GTATCC 3 cut(s) 938, 2440, 2864
BglI GCCNNNNNGGC 1 cut(s) 3338
BglII AGATCT 2 cut(s) 112, 1205
BmcAI AGTACT 2 cut(s) 727, 1724
Bme18I GGWCC 4 cut(s) 24, 717, 2105, 3515
BmeT110I CYCGRG 3 cut(s) 141, 246, 3425
BmgBI CACGTC 1 cut(s) 617
BmgT120I GGNCC 5 cut(s) 24, 34, 717, 2105, 3515
BmiI GGNNCC 9 cut(s) 718, 735, 898, 928, 1461, 1890, 2701, 3076, 3517
BmrI ACTGGG 3 cut(s) 459, 723, 1536
BmuI ACTGGG 3 cut(s) 459, 723, 1536
BoxI GACNNNNGTC 1 cut(s) 3159
BpiI GAAGAC 5 cut(s) 189, 675, 1695, 2886, 2934
BplI GAGNNNNNCTC 4 cut(s) 13, 45, 2069, 2101
BpmI CTGGAG 6 cut(s) 526, 817, 888, 1829, 1952, 3656
Bpu10I CCTNAGC 1 cut(s) 473
BpuEI CTTGAG 1 cut(s) 3231
BpuMI CCSGG 3 cut(s) 33, 493, 741
Bsa29I ATCGAT 1 cut(s) 1677
BsaAI YACGTR 1 cut(s) 3443
BsaBI GATNNNNATC 1 cut(s) 111
BsaI GGTCTC 3 cut(s) 376, 631, 1005
BsaJI CCNNGG 6 cut(s) 339, 677, 698, 740, 1951, 3114
BsaXI ACNNNNNCTCC 8 cut(s) 679, 709, 718, 748, 2979, 3009, 3629, 3659
Bsc4I CCNNNNNNNGG 9 cut(s) 248, 491, 941, 1807, 3220, 3259, 3328, 3383, 3634
Bse118I RCCGGY 1 cut(s) 877
Bse3DI GCAATG 5 cut(s) 1375, 1890, 2037, 2841, 3205
Bse8I GATNNNNATC 1 cut(s) 111
BseBI CCWGG 7 cut(s) 621, 700, 825, 1342, 1430, 1908, 3338
BseCI ATCGAT 1 cut(s) 1677
BseDI CCNNGG 6 cut(s) 339, 677, 698, 740, 1951, 3114
BseJI GATNNNNATC 1 cut(s) 111
BseLI CCNNNNNNNGG 9 cut(s) 248, 491, 941, 1807, 3220, 3259, 3328, 3383, 3634
BseMI GCAATG 5 cut(s) 1375, 1890, 2037, 2841, 3205
BseMII CTCAG 7 cut(s) 1040, 1365, 1443, 1784, 2928, 3491, 3525
BsePI GCGCGC 1 cut(s) 2081
BseRI GAGGAG 6 cut(s) 315, 474, 1339, 1825, 2914, 3134
BseXI GCAGC 8 cut(s) 456, 1377, 2083, 2221, 2251, 2813, 3321, 3328
BseYI CCCAGC 1 cut(s) 226
BsgI GTGCAG 1 cut(s) 3637
Bsh1236I CGCG 1 cut(s) 2083
Bsh1285I CGRYCG 1 cut(s) 878
BshFI GGCC 8 cut(s) 36, 523, 1172, 1267, 1605, 1977, 3252, 3332
BshNI GGYRCC 2 cut(s) 1459, 2699
BshVI ATCGAT 1 cut(s) 1677
BsiEI CGRYCG 1 cut(s) 878
BsiHKAI GWGCWC 1 cut(s) 713
BsiHKCI CYCGRG 3 cut(s) 141, 246, 3425
BsiSI CCGG 5 cut(s) 14, 32, 492, 740, 878
BslFI GGGAC 2 cut(s) 447, 766
BslI CCNNNNNNNGG 9 cut(s) 248, 491, 941, 1807, 3220, 3259, 3328, 3383, 3634
BsmAI GTCTC 5 cut(s) 376, 631, 969, 1005, 3249
BsmFI GGGAC 2 cut(s) 447, 766
BsmI GAATGC 1 cut(s) 1775
BsnI GGCC 8 cut(s) 36, 523, 1172, 1267, 1605, 1977, 3252, 3332
Bso31I GGTCTC 3 cut(s) 376, 631, 1005
BsoBI CYCGRG 3 cut(s) 141, 246, 3425
Bsp1286I GDGCHC 1 cut(s) 713
Bsp19I CCATGG 2 cut(s) 1951, 3114
BspACI CCGC 6 cut(s) 275, 936, 2127, 2262, 2401, 3496
BspANI GGCC 8 cut(s) 36, 523, 1172, 1267, 1605, 1977, 3252, 3332
BspCNI CTCAG 7 cut(s) 1039, 1364, 1444, 1785, 2929, 3490, 3526
BspDI ATCGAT 1 cut(s) 1677
BspFNI CGCG 1 cut(s) 2083
BspHI TCATGA 4 cut(s) 1003, 1477, 1617, 2563
BspLI GGNNCC 9 cut(s) 718, 735, 898, 928, 1461, 1890, 2701, 3076, 3517
BspPI GGATC 6 cut(s) 1242, 1555, 1640, 1918, 2289, 2927
BspT107I GGYRCC 2 cut(s) 1459, 2699
BspTNI GGTCTC 3 cut(s) 376, 631, 1005
BsrDI GCAATG 5 cut(s) 1375, 1890, 2037, 2841, 3205
BsrFI RCCGGY 1 cut(s) 877
BssAI RCCGGY 1 cut(s) 877
BssECI CCNNGG 6 cut(s) 339, 677, 698, 740, 1951, 3114
BssHII GCGCGC 1 cut(s) 2081
BssSI CACGAG 2 cut(s) 2391, 3128
BssT1I CCWWGG 4 cut(s) 339, 677, 1951, 3114
Bst2BI CACGAG 2 cut(s) 2391, 3128
Bst2UI CCWGG 7 cut(s) 621, 700, 825, 1342, 1430, 1908, 3338
BstBAI YACGTR 1 cut(s) 3443
BstC8I GCNNGC 2 cut(s) 535, 2083
BstDSI CCRYGG 2 cut(s) 1951, 3114
BstENI CCTNNNNNAGG 1 cut(s) 3218
BstFNI CGCG 1 cut(s) 2083
BstHHI GCGC 2 cut(s) 2083, 2085
BstMAI GTCTC 5 cut(s) 376, 631, 969, 1005, 3249
BstMCI CGRYCG 1 cut(s) 878
BstMWI GCNNNNNNNGC 5 cut(s) 2068, 2080, 3338, 3350, 3631
BstNI CCWGG 7 cut(s) 621, 700, 825, 1342, 1430, 1908, 3338
BstNSI RCATGY 1 cut(s) 1261
BstPAI GACNNNNGTC 1 cut(s) 3159
BstSFI CTRYAG 5 cut(s) 1587, 2727, 2928, 3396, 3588
BstUI CGCG 1 cut(s) 2083
BstV1I GCAGC 8 cut(s) 456, 1377, 2083, 2221, 2251, 2813, 3321, 3328
BstV2I GAAGAC 5 cut(s) 189, 675, 1695, 2886, 2934
BstX2I RGATCY 6 cut(s) 112, 1205, 1645, 1910, 2281, 2932
BstYI RGATCY 6 cut(s) 112, 1205, 1645, 1910, 2281, 2932
Bsu15I ATCGAT 1 cut(s) 1677
BsuI GTATCC 3 cut(s) 938, 2440, 2864
BsuRI GGCC 8 cut(s) 36, 523, 1172, 1267, 1605, 1977, 3252, 3332
BsuTUI ATCGAT 1 cut(s) 1677
BtgI CCRYGG 2 cut(s) 1951, 3114
BtgZI GCGATG 1 cut(s) 3099
BtrI CACGTC 1 cut(s) 617
BtsI GCAGTG 1 cut(s) 265
BtsIMutI CAGTG 9 cut(s) 265, 711, 841, 1285, 1524, 1899, 2121, 2748, 2881
Cac8I GCNNGC 2 cut(s) 535, 2083
CaiI CAGNNNCTG 2 cut(s) 2264, 3035
CciI TCATGA 4 cut(s) 1003, 1477, 1617, 2563
CfoI GCGC 2 cut(s) 2083, 2085
Cfr10I RCCGGY 1 cut(s) 877
Cfr13I GGNCC 5 cut(s) 24, 34, 717, 2105, 3515
ClaI ATCGAT 1 cut(s) 1677
CseI GACGC 1 cut(s) 3471
DrdI GACNNNNNNGTC 1 cut(s) 390
DseDI GACNNNNNNGTC 1 cut(s) 390
EaeI YGGCCR 2 cut(s) 1170, 1603
Eco130I CCWWGG 4 cut(s) 339, 677, 1951, 3114
Eco31I GGTCTC 3 cut(s) 376, 631, 1005
Eco32I GATATC 1 cut(s) 2962
Eco47I GGWCC 4 cut(s) 24, 717, 2105, 3515
Eco57I CTGAAG 9 cut(s) 149, 1431, 1662, 2228, 2340, 2568, 2661, 2679, 2766
Eco72I CACGTG 1 cut(s) 3443
Eco88I CYCGRG 3 cut(s) 141, 246, 3425
EcoNI CCTNNNNNAGG 1 cut(s) 3218
EcoO109I RGGNCCY 2 cut(s) 24, 3515
EcoRI GAATTC 2 cut(s) 1571, 1945
EcoRII CCWGG 7 cut(s) 619, 698, 823, 1340, 1428, 1906, 3336
EcoRV GATATC 1 cut(s) 2962
EcoT14I CCWWGG 4 cut(s) 339, 677, 1951, 3114
ErhI CCWWGG 4 cut(s) 339, 677, 1951, 3114
FalI AAGNNNNNCTT 4 cut(s) 739, 771, 1773, 1805
FaqI GGGAC 2 cut(s) 447, 766
FauI CCCGC 1 cut(s) 943
FauNDI CATATG 2 cut(s) 886, 2290
FbaI TGATCA 2 cut(s) 1420, 1969
FblI GTMKAC 2 cut(s) 559, 3460
GlaI GCGC 2 cut(s) 2082, 2084
GsaI CCCAGC 1 cut(s) 230
GsuI CTGGAG 6 cut(s) 526, 817, 888, 1829, 1952, 3656
HaeIII GGCC 8 cut(s) 36, 523, 1172, 1267, 1605, 1977, 3252, 3332
HapII CCGG 5 cut(s) 14, 32, 492, 740, 878
HgaI GACGC 1 cut(s) 3471
HhaI GCGC 2 cut(s) 2083, 2085
Hin6I GCGC 2 cut(s) 2081, 2083
HinP1I GCGC 2 cut(s) 2081, 2083
HincII GTYRAC 1 cut(s) 395
HindII GTYRAC 1 cut(s) 395
HpaII CCGG 5 cut(s) 14, 32, 492, 740, 878
HphI GGTGA 8 cut(s) 783, 924, 1067, 1673, 1830, 1933, 1967, 2063
Hpy166II GTNNAC 6 cut(s) 395, 560, 2108, 3127, 3389, 3461
Hpy8I GTNNAC 6 cut(s) 395, 560, 2108, 3127, 3389, 3461
Hpy99I CGWCG 1 cut(s) 1559
HpyCH4IV ACGT 6 cut(s) 562, 598, 616, 1557, 2895, 3442
HpyF10VI GCNNNNNNNGC 5 cut(s) 2068, 2080, 3338, 3350, 3631
HpySE526I ACGT 6 cut(s) 562, 598, 616, 1557, 2895, 3442
HspAI GCGC 2 cut(s) 2081, 2083
KpnI GGTACC 1 cut(s) 2703
Ksp22I TGATCA 2 cut(s) 1420, 1969
LmnI GCTCC 6 cut(s) 679, 739, 1201, 2327, 3317, 3364
Lsp1109I GCAGC 8 cut(s) 456, 1377, 2083, 2221, 2251, 2813, 3321, 3328
MaeII ACGT 6 cut(s) 562, 598, 616, 1557, 2895, 3442
MaeIII GTNAC 9 cut(s) 260, 361, 434, 763, 1055, 1354, 1921, 2117, 3400
MfeI CAATTG 2 cut(s) 2592, 2845
MflI RGATCY 6 cut(s) 112, 1205, 1645, 1910, 2281, 2932
MhlI GDGCHC 1 cut(s) 713
MlsI TGGCCA 1 cut(s) 1605
MluNI TGGCCA 1 cut(s) 1605
MlyI GAGTC 7 cut(s) 1064, 1457, 1918, 2948, 3251, 3578, 3647
MmeI TCCRAC 3 cut(s) 150, 992, 1285
Mox20I TGGCCA 1 cut(s) 1605
MscI TGGCCA 1 cut(s) 1605
MseI TTAA 5 cut(s) 270, 308, 1656, 2613, 2982
MslI CAYNNNNRTG 2 cut(s) 1002, 3659
Msp20I TGGCCA 1 cut(s) 1605
MspA1I CMGCKG 2 cut(s) 2264, 2401
MspI CCGG 5 cut(s) 14, 32, 492, 740, 878
MunI CAATTG 2 cut(s) 2592, 2845
Mva1269I GAATGC 1 cut(s) 1775
MvaI CCWGG 7 cut(s) 621, 700, 825, 1342, 1430, 1908, 3338
MvnI CGCG 1 cut(s) 2083
MwoI GCNNNNNNNGC 5 cut(s) 2068, 2080, 3338, 3350, 3631
NciI CCSGG 3 cut(s) 33, 493, 741
NcoI CCATGG 2 cut(s) 1951, 3114
NdeI CATATG 2 cut(s) 886, 2290
NlaIV GGNNCC 9 cut(s) 718, 735, 898, 928, 1461, 1890, 2701, 3076, 3517
NmeAIII GCCGAG 2 cut(s) 62, 69
NmuCI GTSAC 5 cut(s) 260, 1055, 1354, 1921, 2117
NspI RCATGY 1 cut(s) 1261
PagI TCATGA 4 cut(s) 1003, 1477, 1617, 2563
PauI GCGCGC 1 cut(s) 2081
PciI ACATGT 1 cut(s) 1257
PctI GAATGC 1 cut(s) 1775
PfeI GAWTC 9 cut(s) 52, 231, 1214, 1804, 1998, 2491, 3101, 3224, 3437
PflFI GACNNNGTC 2 cut(s) 1484, 1761
PflMI CCANNNNNTGG 1 cut(s) 3328
PfoI TCCNGGA 2 cut(s) 491, 1340
PleI GAGTC 7 cut(s) 1064, 1456, 1918, 2947, 3250, 3577, 3646
PmaCI CACGTG 1 cut(s) 3443
PmlI CACGTG 1 cut(s) 3443
PpsI GAGTC 7 cut(s) 1064, 1456, 1918, 2947, 3250, 3577, 3646
Ppu21I YACGTR 1 cut(s) 3443
PpuMI RGGWCCY 2 cut(s) 24, 3515
PscI ACATGT 1 cut(s) 1257
PshAI GACNNNNGTC 1 cut(s) 3159
Psp5II RGGWCCY 2 cut(s) 24, 3515
Psp6I CCWGG 7 cut(s) 619, 698, 823, 1340, 1428, 1906, 3336
PspCI CACGTG 1 cut(s) 3443
PspFI CCCAGC 1 cut(s) 226
PspGI CCWGG 7 cut(s) 619, 698, 823, 1340, 1428, 1906, 3336
PspN4I GGNNCC 9 cut(s) 718, 735, 898, 928, 1461, 1890, 2701, 3076, 3517
PspPI GGNCC 5 cut(s) 24, 34, 717, 2105, 3515
PspPPI RGGWCCY 2 cut(s) 24, 3515
PstNI CAGNNNCTG 2 cut(s) 2264, 3035
PsuI RGATCY 6 cut(s) 112, 1205, 1645, 1910, 2281, 2932
PsyI GACNNNGTC 2 cut(s) 1484, 1761
PteI GCGCGC 1 cut(s) 2081
RseI CAYNNNNRTG 2 cut(s) 1002, 3659
SaqAI TTAA 5 cut(s) 270, 308, 1656, 2613, 2982
Sau96I GGNCC 5 cut(s) 24, 34, 717, 2105, 3515
ScaI AGTACT 2 cut(s) 727, 1724
SchI GAGTC 7 cut(s) 1064, 1457, 1918, 2948, 3251, 3578, 3647
SduI GDGCHC 1 cut(s) 713
SfcI CTRYAG 5 cut(s) 1587, 2727, 2928, 3396, 3588
SinI GGWCC 4 cut(s) 24, 717, 2105, 3515
SmiMI CAYNNNNRTG 2 cut(s) 1002, 3659
SmlI CTYRAG 1 cut(s) 3246
SmoI CTYRAG 1 cut(s) 3246
SsiI CCGC 6 cut(s) 275, 936, 2127, 2262, 2401, 3496
SspI AATATT 2 cut(s) 820, 3408
StyI CCWWGG 4 cut(s) 339, 677, 1951, 3114
TaiI ACGT 6 cut(s) 565, 601, 619, 1560, 2898, 3445
TaqI TCGA 6 cut(s) 78, 388, 874, 1225, 1677, 2792
TatI WGTACW 5 cut(s) 500, 725, 1722, 2759, 2858
TauI GCSGC 2 cut(s) 2264, 2404
TfiI GAWTC 9 cut(s) 52, 231, 1214, 1804, 1998, 2491, 3101, 3224, 3437
Tru1I TTAA 5 cut(s) 270, 308, 1656, 2613, 2982
Tru9I TTAA 5 cut(s) 270, 308, 1656, 2613, 2982
TscAI CASTG 9 cut(s) 265, 718, 841, 1285, 1531, 1899, 2128, 2755, 2881
TseFI GTSAC 5 cut(s) 260, 1055, 1354, 1921, 2117
TseI GCWGC 8 cut(s) 444, 1365, 2071, 2234, 2264, 2801, 3309, 3341
Tsp45I GTSAC 5 cut(s) 260, 1055, 1354, 1921, 2117
TspGWI ACGGA 2 cut(s) 649, 2399
TspRI CASTG 9 cut(s) 265, 718, 841, 1285, 1531, 1899, 2128, 2755, 2881
Tth111I GACNNNGTC 2 cut(s) 1484, 1761
Van91I CCANNNNNTGG 1 cut(s) 3328
VpaK11BI GGWCC 4 cut(s) 24, 717, 2105, 3515
XagI CCTNNNNNAGG 1 cut(s) 3218
XapI RAATTY 4 cut(s) 1571, 1855, 1945, 2020
XbaI TCTAGA 1 cut(s) 911
XceI RCATGY 1 cut(s) 1261
XcmI CCANNNNNNNNNTGG 3 cut(s) 727, 1228, 1618
XmiI GTMKAC 2 cut(s) 559, 3460
ZrmI AGTACT 2 cut(s) 727, 1724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.