Rorug04G0337400

negative regulation of protein maturation

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
51093089 .. 51093382
294 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0337400.1

Sequence Viewer

Length: 294 bp
ATGTTGTTGGAGTTGGAAAGGGAATGCTTAGAAGTTTACAGGAGGAAGGTTGATGAAGCTGCCAATACCAAGGCACGCCTTCATCAGTCCGTTGCAGCAAAAGAAGCTGAGCTCGCCACTCTCATGGCTACTTTGGGGGAACTCAATATTGATTCACCGGTAAAGAATCAAAACTCAGACTGTTGTGGAAATGATCATTTATTGACCATTTTTTGTTCTCGTACTAGCAGTTTTGCTCTCCTATTTTCCAATTTGGGTCATTTATTTGTCATATTTGTGATTAATATACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001817 GO:0001959 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0003824 GO:0004842 GO:0004857 GO:0004866 GO:0004869 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006807 GO:0006915 GO:0007154 GO:0007165 GO:0007166 GO:0007249 GO:0008150 GO:0008152 GO:0008219 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010466 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010646 GO:0010647 GO:0010803 GO:0010939 GO:0010941 GO:0010951 GO:0010955 GO:0012501 GO:0016567 GO:0016579 GO:0016740 GO:0019221 GO:0019222 GO:0019538 GO:0019787 GO:0023051 GO:0023052 GO:0023056 GO:0030162 GO:0030234 GO:0030414 GO:0031323 GO:0031324 GO:0031325 GO:0031347 GO:0031396 GO:0031398 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032101 GO:0032268 GO:0032269 GO:0032270 GO:0032446 GO:0033209 GO:0034097 GO:0034121 GO:0034612 GO:0035556 GO:0036211 GO:0038061 GO:0039531 GO:0039535 GO:0042221 GO:0042981 GO:0043027 GO:0043028 GO:0043066 GO:0043067 GO:0043069 GO:0043086 GO:0043122 GO:0043123 GO:0043154 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043281 GO:0043412 GO:0043900 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045861 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050688 GO:0050727 GO:0050776 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051346 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060544 GO:0060546 GO:0060547 GO:0060548 GO:0060759 GO:0061134 GO:0061135 GO:0065007 GO:0065009 GO:0070013 GO:0070424 GO:0070613 GO:0070646 GO:0070647 GO:0070887 GO:0071310 GO:0071345 GO:0071356 GO:0071704 GO:0080090 GO:0080134 GO:0097340 GO:0097341 GO:0098772 GO:0140096 GO:1901564 GO:1902531 GO:1902533 GO:1903317 GO:1903318 GO:1903320 GO:1903322 GO:1990001 GO:2000116 GO:2000117
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

97

Amino Acids

10.84

Weight (kDa)

5.51

Isoelectric Point (pI)

43.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012297)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 223
AgeI ACCGGT 1 cut(s) 157
AluBI AGCT 3 cut(s) 59, 107, 112
AluI AGCT 3 cut(s) 59, 107, 112
Alw21I GWGCWC 1 cut(s) 114
ApeKI GCWGC 2 cut(s) 59, 95
AseI ATTAAT 1 cut(s) 282
AsiGI ACCGGT 1 cut(s) 157
AsuHPI GGTGA 1 cut(s) 147
BanII GRGCYC 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 114
BbvI GCAGC 2 cut(s) 46, 107
BclI TGATCA 1 cut(s) 193
BfaI CTAG 1 cut(s) 225
BisI GCNGC 2 cut(s) 60, 96
BlpI GCTNAGC 1 cut(s) 108
BlsI GCNGC 2 cut(s) 61, 97
Bpu1102I GCTNAGC 1 cut(s) 108
BsaJI CCNNGG 1 cut(s) 69
BsaWI WCCGGW 1 cut(s) 157
Bse118I RCCGGY 1 cut(s) 157
BseDI CCNNGG 1 cut(s) 69
BseMII CTCAG 2 cut(s) 99, 189
BseXI GCAGC 2 cut(s) 46, 107
BshTI ACCGGT 1 cut(s) 157
BsiHKAI GWGCWC 1 cut(s) 114
BsiSI CCGG 1 cut(s) 158
BsmI GAATGC 1 cut(s) 29
Bsp1286I GDGCHC 1 cut(s) 114
Bsp143I GATC 1 cut(s) 193
Bsp1720I GCTNAGC 1 cut(s) 108
BspCNI CTCAG 2 cut(s) 100, 188
BsrFI RCCGGY 1 cut(s) 157
BssAI RCCGGY 1 cut(s) 157
BssECI CCNNGG 1 cut(s) 69
BssMI GATC 1 cut(s) 193
BssT1I CCWWGG 1 cut(s) 69
Bst4CI ACNGT 2 cut(s) 182, 291
BstC8I GCNNGC 2 cut(s) 76, 114
BstDEI CTNAG 3 cut(s) 28, 108, 175
BstKTI GATC 1 cut(s) 196
BstMBI GATC 1 cut(s) 193
BstMWI GCNNNNNNNGC 2 cut(s) 104, 113
BstV1I GCAGC 2 cut(s) 46, 107
BstXI CCANNNNNNTGG 1 cut(s) 124
Cac8I GCNNGC 2 cut(s) 76, 114
Cfr10I RCCGGY 1 cut(s) 157
Csp6I GTAC 1 cut(s) 222
CspAI ACCGGT 1 cut(s) 157
CviAII CATG 1 cut(s) 124
CviJI RGCY 4 cut(s) 59, 107, 112, 128
CviKI_1 RGCY 4 cut(s) 59, 107, 112, 128
CviQI GTAC 1 cut(s) 222
DdeI CTNAG 3 cut(s) 28, 108, 175
DpnI GATC 1 cut(s) 195
DpnII GATC 1 cut(s) 193
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 1 cut(s) 69
Eco24I GRGCYC 1 cut(s) 114
Eco53kI GAGCTC 1 cut(s) 112
EcoICRI GAGCTC 1 cut(s) 112
EcoT14I CCWWGG 1 cut(s) 69
EcoT38I GRGCYC 1 cut(s) 114
ErhI CCWWGG 1 cut(s) 69
FaeI CATG 1 cut(s) 127
FaiI YATR 3 cut(s) 125, 272, 287
FatI CATG 1 cut(s) 123
FbaI TGATCA 1 cut(s) 193
Fnu4HI GCNGC 2 cut(s) 60, 96
FriOI GRGCYC 1 cut(s) 114
Fsp4HI GCNGC 2 cut(s) 60, 96
FspBI CTAG 1 cut(s) 225
GluI GCNGC 2 cut(s) 60, 96
HapII CCGG 1 cut(s) 158
Hin1II CATG 1 cut(s) 127
HinfI GANTC 2 cut(s) 152, 166
HpaII CCGG 1 cut(s) 158
HphI GGTGA 1 cut(s) 147
Hpy166II GTNNAC 1 cut(s) 37
Hpy188I TCNGA 1 cut(s) 178
Hpy8I GTNNAC 1 cut(s) 37
HpyAV CCTTC 2 cut(s) 40, 89
HpyCH4III ACNGT 2 cut(s) 182, 291
HpyCH4V TGCA 1 cut(s) 95
HpyF10VI GCNNNNNNNGC 2 cut(s) 104, 113
HpyF3I CTNAG 3 cut(s) 28, 108, 175
Hsp92II CATG 1 cut(s) 127
Ksp22I TGATCA 1 cut(s) 193
Kzo9I GATC 1 cut(s) 193
LpnPI CCDG 2 cut(s) 25, 171
Lsp1109I GCAGC 2 cut(s) 46, 107
MaeI CTAG 1 cut(s) 225
MalI GATC 1 cut(s) 195
MboI GATC 1 cut(s) 193
MhlI GDGCHC 1 cut(s) 114
MluCI AATT 1 cut(s) 250
MnlI CCTC 1 cut(s) 36
MseI TTAA 1 cut(s) 282
MslI CAYNNNNRTG 2 cut(s) 122, 275
MspI CCGG 1 cut(s) 158
Mva1269I GAATGC 1 cut(s) 29
MwoI GCNNNNNNNGC 2 cut(s) 104, 113
NdeII GATC 1 cut(s) 193
NlaIII CATG 1 cut(s) 127
PctI GAATGC 1 cut(s) 29
PfeI GAWTC 2 cut(s) 152, 166
PinAI ACCGGT 1 cut(s) 157
PkrI GCNGC 2 cut(s) 61, 97
PshBI ATTAAT 1 cut(s) 282
Psp124BI GAGCTC 1 cut(s) 114
RsaI GTAC 1 cut(s) 223
RsaNI GTAC 1 cut(s) 222
RseI CAYNNNNRTG 2 cut(s) 122, 275
SacI GAGCTC 1 cut(s) 114
SaqAI TTAA 1 cut(s) 282
SatI GCNGC 2 cut(s) 60, 96
Sau3AI GATC 1 cut(s) 193
SduI GDGCHC 1 cut(s) 114
SetI ASST 4 cut(s) 51, 61, 109, 114
SgeI CNNG 8 cut(s) 52, 82, 87, 125, 136, 170, 231, 237
SmiMI CAYNNNNRTG 2 cut(s) 122, 275
Sse9I AATT 1 cut(s) 250
SspI AATATT 1 cut(s) 148
SspMI CTAG 1 cut(s) 225
SstI GAGCTC 1 cut(s) 114
StyI CCWWGG 1 cut(s) 69
TaaI ACNGT 2 cut(s) 182, 291
TasI AATT 1 cut(s) 250
TfiI GAWTC 2 cut(s) 152, 166
Tru1I TTAA 1 cut(s) 282
Tru9I TTAA 1 cut(s) 282
TseI GCWGC 2 cut(s) 59, 95
TspDTI ATGAA 2 cut(s) 69, 71
TspGWI ACGGA 1 cut(s) 79
VspI ATTAAT 1 cut(s) 282
XspI CTAG 1 cut(s) 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.