Ring finger domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g35080 FvH4_7g06610 |
| pyrus_communis | pycom02g26040 |
| rosa_multiflora | Rmu_sc0015511.1_g000016 |
| rosa_roxburghii | Rroxscaffold_4G00316090 Rroxscaffold_5G00385190 |
| rosa_rugosa | Rorug01G0121900 Rorug04G0354500 |
| rosa_samantha | Rh1AG142900 Rh1BG112100 |
| rosa_wichuraiana | Rw4G035620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AluBI | AGCT | 3 cut(s) | 53, 103, 158 |
| AluI | AGCT | 3 cut(s) | 53, 103, 158 |
| ApeKI | GCWGC | 1 cut(s) | 53 |
| AsuHPI | GGTGA | 2 cut(s) | 53, 182 |
| BaeGI | GKGCMC | 1 cut(s) | 149 |
| BbvI | GCAGC | 1 cut(s) | 40 |
| BfaI | CTAG | 1 cut(s) | 63 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 115 |
| BisI | GCNGC | 1 cut(s) | 54 |
| BlsI | GCNGC | 1 cut(s) | 55 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 37 |
| BpuEI | CTTGAG | 2 cut(s) | 138, 185 |
| BseRI | GAGGAG | 1 cut(s) | 20 |
| BseSI | GKGCMC | 1 cut(s) | 149 |
| BseXI | GCAGC | 1 cut(s) | 40 |
| Bsp1286I | GDGCHC | 1 cut(s) | 149 |
| Bst4CI | ACNGT | 1 cut(s) | 75 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 115 |
| BstSLI | GKGCMC | 1 cut(s) | 149 |
| BstV1I | GCAGC | 1 cut(s) | 40 |
| CviAII | CATG | 1 cut(s) | 137 |
| CviJI | RGCY | 4 cut(s) | 53, 103, 158, 185 |
| CviKI_1 | RGCY | 4 cut(s) | 53, 103, 158, 185 |
| FaeI | CATG | 1 cut(s) | 140 |
| FaiI | YATR | 6 cut(s) | 37, 39, 50, 92, 138, 143 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 147, 179 |
| FatI | CATG | 1 cut(s) | 136 |
| FauNDI | CATATG | 1 cut(s) | 37 |
| Fnu4HI | GCNGC | 1 cut(s) | 54 |
| Fsp4HI | GCNGC | 1 cut(s) | 54 |
| FspBI | CTAG | 1 cut(s) | 63 |
| GluI | GCNGC | 1 cut(s) | 54 |
| Hin1II | CATG | 1 cut(s) | 140 |
| HphI | GGTGA | 2 cut(s) | 53, 182 |
| Hpy188I | TCNGA | 1 cut(s) | 25 |
| Hpy188III | TCNNGA | 1 cut(s) | 164 |
| HpyCH4III | ACNGT | 1 cut(s) | 75 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 115 |
| Hsp92II | CATG | 1 cut(s) | 140 |
| Lsp1109I | GCAGC | 1 cut(s) | 40 |
| MaeI | CTAG | 1 cut(s) | 63 |
| MhlI | GDGCHC | 1 cut(s) | 149 |
| MmeI | TCCRAC | 1 cut(s) | 105 |
| MnlI | CCTC | 2 cut(s) | 7, 160 |
| MseI | TTAA | 1 cut(s) | 190 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 115 |
| NdeI | CATATG | 1 cut(s) | 37 |
| NlaIII | CATG | 1 cut(s) | 140 |
| PkrI | GCNGC | 1 cut(s) | 55 |
| SaqAI | TTAA | 1 cut(s) | 190 |
| SatI | GCNGC | 1 cut(s) | 54 |
| SduI | GDGCHC | 1 cut(s) | 149 |
| SetI | ASST | 4 cut(s) | 18, 55, 105, 160 |
| SgeI | CNNG | 8 cut(s) | 42, 75, 112, 131, 133, 149, 167, 176 |
| SmlI | CTYRAG | 2 cut(s) | 153, 164 |
| SmoI | CTYRAG | 2 cut(s) | 153, 164 |
| SspMI | CTAG | 1 cut(s) | 63 |
| TaaI | ACNGT | 1 cut(s) | 75 |
| TaqI | TCGA | 2 cut(s) | 31, 99 |
| Tru1I | TTAA | 1 cut(s) | 190 |
| Tru9I | TTAA | 1 cut(s) | 190 |
| TseI | GCWGC | 1 cut(s) | 53 |
| TspDTI | ATGAA | 1 cut(s) | 125 |
| XspI | CTAG | 1 cut(s) | 63 |