Rorug05G0081000

Programmed cell death protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0006175
Physical Location & Seq
Reverse (-)
6998264 .. 7001783
3520 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0081000.1

Sequence Viewer

Length: 2595 bp
ATGGAGAGCACTTGGTTCTTCCTCATCTACTCTTGTTGTATGGCGGCTAGCTGCTTAACTATGGCAACAAAACAAACCAACATCACCACAGACCAATCTGCTCTACTTGCTCTCAAAGCCCGTATCACCAGTGACCCTCATAACTTGATCTTGACCAACTGGTCAACCACCACTCTTGTTTGCAACTGGGTTGGCGTTGCTTGTGGTAAACACCATCATCGAGTCACAACCTTGAATATCTCTTATTTTTGTCTCACCGGCACCATTACTCCGGAGCTAGGCAACCTATCATTTCTTGTTGAGTTGCGAGTCACAAATAACAGTTTTCACGGTACCTTACCTTCAGAGTTGGGTCGTTTGCGCATAATGAAGTTGATTAGTTTCACATTTAACCAGTTTTCAGGGATCATTCCGTCATGGTTTGGGTCCTTATCCAAGCTTCAAGACTTGTATTTGTACGGTAATAAATTTTCAGGTTCCATACCAGCGGCCATCTTCAACTTATCTGCATTGCAAGTAATTTCTTTGAGCAATAACCAACTATCAGGTAGTATACCGAGAGAAATTGGAAATTTAACAACATTGAAGGAGATCTACCTTGATAATAATAATTTCATAGAAATTCCAAATGAGATCGGCGCTTTAGATCAATTGGAGAAGTTGTATGTGCAAGAAAATGTCCTAGAAGGAAATGTTCCTATGGTTGTTTTCAACATGTCTTCTTTGATTACTTTGACTCTATTTGGAAACAACTTGAAGGGTAGACTTCCAGACAATATGTGCCAGAATCTTCCTCATATTCAAATTTTGAATTTCGGTGATAACCAGCTTGAAGGTCCACTTCCATCCATATTTTGGCAATGCAAACAACTTGTTGAATTAAGCTTGGAGCATAACAAGTTCAGCGGAAACATACCCAAAGATATTGGGAACGCAACCCAATTAAAGCAGGTTTATCTTGCCAAAAACAATTTGACAGGTACTGTATCAGATGAGATTGGTCGTCTTCCAAATTTAGTGTTATTGTACCTCGGTTTTAATAATCTGAATGGTCACATCCCAACCACAATCTTCAACAAGTCCACATTAGTGACCATTGATCTAACTAGTAATCAGCTCTCAGGCAACCTCCCAACAAACATAGGTCTTGGGCTTCCAAACCTCCAAAATTTCTTCCTGGGAGAAATTAAACTCAGCGGAGTAATCCCCAAATCCATCTCTAATGCTTCTCAGCTCACGTTCCTAGAATTGGGAAGGAACTTTCTCTCGGGCTTTATTCCTAACACGCTGTGTGCCTTAACAAACCTTGAGTGGCTTTCCTTATTTGAGAATAATTTAACTCTTGATACTACTACTCCGGAAGTAAATGTCCTCTCTTGCTTGGCAAATCTAAAAAATTTGAAGCGCTTGGCCTTTGATACAAACCCATTAAATGCCAACCTCCCTATTTCCTTTAGGAATCTCTCTTCATCACTTCAGAATGTTTATCTATACAACTGCAACATGAGAGGTAATATTCCTGATGATATAGGCAACTTGAGCAGCTTGACAATCTTAAACATGCATGACAACAAATTAAGTGGATCAATTCCAACCTCAATAGGAACACTGAAAAATCTCCAAGTTTTGAGTTTGGACGGTAACAGCTTTCAAGGACACATCGCGGATGAACTTTGTGAACTACAAAACCTTTTTGTATTAAGCTTGCATGGTAACCAGCTCTCTGGCTCTATACCTTCTTGTTTGGGTCATCTAGCCACCGCACTAAGAGCTCTAGATTTAGGGTCCAATTTGTTGAATTCAACAATACCAACTAACTTGTGGGGACTTTCAGATCTCTTGTATGTATACTTGTCATCGAATAATCTAAGTGGATCTCTCTCGGAAGATGTTGGTAATCTTAAAGTTATTATAGAGATAGATTTATCAAACAACCACTTATCCGGTAGCATACCGAGCAGCATTGGGAATCTACAAAGCATGGTCAAGCTCTCCTTGGAGAATAATAAGTTCGAAGGCCTTATTCCTAATTCACTTGGCAAGTCGCTCAGCTTGGAAATTTTAGATTTATCCATAAACAATCTGTCTGGATTGATTCCAAAGTCATTTGAATCGCTCAAATATCTCAAAATTTTTAATCTGTCTTTCAACAAACTCCAAGGAGAAATTCCAACGAGCGGACCTTTCCAAAACCTCTCTGCTCAATCATTTGTTTCGAGCGGGGAACTCCGTGGTGCATCCCGATTCCTTGTCCCATCATGCAATAATAGAACATTTGAAGCACATTTGAAGTCCATTATATCAGGGATCTTGTCAGCATTGTTCATAGCTACCTTCATTTGGATAGTGATACTACGCAGAAGAAAGAATGTGGAAGCTGCAAAAGAGATTACATTGTTACCTCAACTTCTACATAGAAGAGTTTCGTACCTCGAACTTGTTAGAGCAACAAATGCATTTAATGAAAGCAACTTACTTGGCAGTGGTGGTTTTGGCTCAGTATATAAAGGAACATTTTCTGATGGGATAGATGTGGCCGTAAAGGTTTTCAATTTACAGCTAGAAGGGGCGTTTAAGAGTTTCGACATGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PDCD2_C zf-MYND

Protein Analysis

864

Amino Acids

94.82

Weight (kDa)

6.48

Isoelectric Point (pI)

33.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 68 1.3e-08 Leucine rich repeat N-terminal domain
LRR_8 PF13855 162 - 205 2.5e-06 Leucine rich repeat
LRR_14 PF23598 165 - 248 1.8e-08 Leucine-rich repeat region
LRR_14 PF23598 338 - 496 1.8e-06 Leucine-rich repeat region
LRR_14 PF23598 459 - 574 1.3e-08 Leucine-rich repeat region
LRR_14 PF23598 588 - 719 4.6e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 160
Acc16I TGCGCA 1 cut(s) 362
Acc36I ACCTGC 1 cut(s) 940
Acc65I GGTACC 1 cut(s) 332
AccB1I GGYRCC 2 cut(s) 260, 332
AccB7I CCANNNNNTGG 1 cut(s) 855
AccBSI CCGCTC 2 cut(s) 2178, 2220
AccI GTMKAC 3 cut(s) 553, 763, 1848
AccII CGCG 1 cut(s) 1664
AccIII TCCGGA 2 cut(s) 271, 1357
AciI CCGC 8 cut(s) 44, 488, 906, 1197, 1664, 1761, 2178, 2220
AclWI GGATC 4 cut(s) 413, 1591, 1882, 2315
AcoI YGGCCR 2 cut(s) 489, 2535
AcuI CTGAAG 2 cut(s) 327, 1460
AdeI CACNNNGTG 1 cut(s) 1290
AfaI GTAC 5 cut(s) 334, 458, 982, 1028, 2429
AfeI AGCGCT 1 cut(s) 1406
AfiI CCNNNNNNNGG 5 cut(s) 278, 855, 1249, 2177, 2340
AflIII ACRYGT 1 cut(s) 714
AhlI ACTAGT 1 cut(s) 1106
AjnI CCWGG 1 cut(s) 1176
AjuI GAANNNNNNNTTGG 2 cut(s) 2151, 2183
AleI CACNNNNGTG 1 cut(s) 1088
Alw21I GWGCWC 2 cut(s) 11, 1774
Alw26I GTCTC 1 cut(s) 257
AlwI GGATC 4 cut(s) 413, 1591, 1882, 2315
AlwNI CAGNNNCTG 1 cut(s) 983
Ama87I CYCGRG 1 cut(s) 1267
Aor13HI TCCGGA 2 cut(s) 271, 1357
Aor51HI AGCGCT 1 cut(s) 1406
AoxI GGCC 4 cut(s) 489, 1410, 2017, 2535
ApeKI GCWGC 4 cut(s) 51, 1542, 1959, 2378
Asp700I GAANNNNTTC 2 cut(s) 2422, 2515
Asp718I GGTACC 1 cut(s) 332
AspLEI GCGC 3 cut(s) 363, 641, 1407
AspS9I GGNCC 4 cut(s) 426, 836, 1785, 2180
AsuHPI GGTGA 4 cut(s) 76, 118, 247, 830
AsuII TTCGAA 1 cut(s) 2013
AsuNHI GCTAGC 1 cut(s) 47
AvaI CYCGRG 1 cut(s) 1267
AvaII GGWCC 4 cut(s) 426, 836, 1785, 2180
BanI GGYRCC 2 cut(s) 260, 332
BanII GRGCYC 1 cut(s) 1774
BarI GAAGNNNNNNTAC 4 cut(s) 325, 357, 578, 610
BbsI GAAGAC 2 cut(s) 711, 998
Bbv12I GWGCWC 2 cut(s) 11, 1774
BbvI GCAGC 4 cut(s) 38, 1554, 1971, 2365
BccI CCATC 6 cut(s) 222, 500, 853, 1223, 2263, 2516
BceAI ACGGC 1 cut(s) 2522
BciT130I CCWGG 1 cut(s) 1178
BcoDI GTCTC 1 cut(s) 257
BcuI ACTAGT 1 cut(s) 1106
BfaI CTAG 8 cut(s) 48, 278, 683, 1107, 1244, 1754, 1775, 2561
BfoI RGCGCY 2 cut(s) 642, 1408
BfuAI ACCTGC 1 cut(s) 940
BglII AGATCT 2 cut(s) 591, 1834
BisI GCNGC 6 cut(s) 45, 52, 489, 1543, 1960, 2379
BlpI GCTNAGC 1 cut(s) 2048
BlsI GCNGC 6 cut(s) 46, 53, 490, 1544, 1961, 2380
Bme1390I CCNGG 1 cut(s) 1178
Bme18I GGWCC 4 cut(s) 426, 836, 1785, 2180
BmeT110I CYCGRG 1 cut(s) 1267
BmgT120I GGNCC 4 cut(s) 426, 836, 1785, 2180
BmiI GGNNCC 5 cut(s) 262, 334, 427, 478, 1786
BmrFI CCNGG 1 cut(s) 1178
BmrI ACTGGG 1 cut(s) 196
BmsI GCATC 1 cut(s) 2246
BmtI GCTAGC 1 cut(s) 51
BmuI ACTGGG 1 cut(s) 196
BpiI GAAGAC 2 cut(s) 711, 998
Bpu1102I GCTNAGC 1 cut(s) 2048
Bpu14I TTCGAA 1 cut(s) 2013
BpuEI CTTGAG 2 cut(s) 1328, 1558
BsaJI CCNNGG 5 cut(s) 1030, 1177, 1995, 2158, 2230
BsaWI WCCGGW 3 cut(s) 271, 1357, 1943
BsaXI ACNNNNNCTCC 6 cut(s) 253, 283, 647, 677, 1339, 1369
Bsc4I CCNNNNNNNGG 5 cut(s) 278, 855, 1249, 2177, 2340
Bse118I RCCGGY 1 cut(s) 257
Bse1I ACTGG 4 cut(s) 129, 164, 191, 394
Bse3DI GCAATG 2 cut(s) 509, 866
BseAI TCCGGA 2 cut(s) 271, 1357
BseBI CCWGG 1 cut(s) 1178
BseDI CCNNGG 5 cut(s) 1030, 1177, 1995, 2158, 2230
BseGI GGATG 4 cut(s) 845, 1056, 1672, 2237
BseLI CCNNNNNNNGG 5 cut(s) 278, 855, 1249, 2177, 2340
BseMI GCAATG 2 cut(s) 509, 866
BseMII CTCAG 5 cut(s) 1134, 1207, 1244, 2062, 2511
BseNI ACTGG 4 cut(s) 129, 164, 191, 394
BseXI GCAGC 4 cut(s) 38, 1554, 1971, 2365
Bsh1236I CGCG 1 cut(s) 1664
BshFI GGCC 4 cut(s) 491, 1412, 2019, 2537
BshNI GGYRCC 2 cut(s) 260, 332
BsiHKAI GWGCWC 2 cut(s) 11, 1774
BsiHKCI CYCGRG 1 cut(s) 1267
BsiSI CCGG 4 cut(s) 258, 272, 1358, 1944
BslFI GGGAC 2 cut(s) 1839, 2237
BslI CCNNNNNNNGG 5 cut(s) 278, 855, 1249, 2177, 2340
BsmAI GTCTC 1 cut(s) 257
BsmFI GGGAC 2 cut(s) 1839, 2237
BsnI GGCC 4 cut(s) 491, 1412, 2019, 2537
BsoBI CYCGRG 1 cut(s) 1267
Bsp119I TTCGAA 1 cut(s) 2013
Bsp1286I GDGCHC 2 cut(s) 11, 1774
Bsp13I TCCGGA 2 cut(s) 271, 1357
Bsp1720I GCTNAGC 1 cut(s) 2048
BspACI CCGC 8 cut(s) 44, 488, 906, 1197, 1664, 1761, 2178, 2220
BspANI GGCC 4 cut(s) 491, 1412, 2019, 2537
BspCNI CTCAG 5 cut(s) 1133, 1206, 1243, 2061, 2510
BspEI TCCGGA 2 cut(s) 271, 1357
BspFNI CGCG 1 cut(s) 1664
BspLI GGNNCC 5 cut(s) 262, 334, 427, 478, 1786
BspMI ACCTGC 1 cut(s) 940
BspOI GCTAGC 1 cut(s) 51
BspPI GGATC 4 cut(s) 413, 1591, 1882, 2315
BspT104I TTCGAA 1 cut(s) 2013
BspT107I GGYRCC 2 cut(s) 260, 332
BsrBI CCGCTC 2 cut(s) 2178, 2220
BsrDI GCAATG 2 cut(s) 509, 866
BsrFI RCCGGY 1 cut(s) 257
BsrI ACTGG 4 cut(s) 129, 164, 191, 394
BssAI RCCGGY 1 cut(s) 257
BssECI CCNNGG 5 cut(s) 1030, 1177, 1995, 2158, 2230
BssNAI GTATAC 2 cut(s) 554, 1849
BssT1I CCWWGG 2 cut(s) 1995, 2158
Bst1107I GTATAC 2 cut(s) 554, 1849
Bst2UI CCWGG 1 cut(s) 1178
Bst4CI ACNGT 5 cut(s) 323, 332, 461, 985, 1640
Bst6I CTCTTC 2 cut(s) 1471, 2413
BstAPI GCANNNNNTGC 1 cut(s) 2453
BstBI TTCGAA 1 cut(s) 2013
BstC8I GCNNGC 2 cut(s) 49, 1706
BstDEI CTNAG 7 cut(s) 1120, 1193, 1230, 1766, 1868, 2048, 2497
BstDSI CCRYGG 1 cut(s) 2230
BstEII GGTNACC 1 cut(s) 1712
BstF5I GGATG 4 cut(s) 845, 1056, 1672, 2237
BstFNI CGCG 1 cut(s) 1664
BstH2I RGCGCY 2 cut(s) 642, 1408
BstHHI GCGC 3 cut(s) 363, 641, 1407
BstMAI GTCTC 1 cut(s) 257
BstMWI GCNNNNNNNGC 6 cut(s) 107, 116, 1539, 1769, 1956, 2453
BstNI CCWGG 1 cut(s) 1178
BstNSI RCATGY 3 cut(s) 718, 1564, 2590
BstPI GGTNACC 1 cut(s) 1712
BstSCI CCNGG 1 cut(s) 1176
BstUI CGCG 1 cut(s) 1664
BstV1I GCAGC 4 cut(s) 38, 1554, 1971, 2365
BstV2I GAAGAC 2 cut(s) 711, 998
BstX2I RGATCY 4 cut(s) 591, 1834, 1874, 2307
BstXI CCANNNNNNTGG 1 cut(s) 1724
BstYI RGATCY 4 cut(s) 591, 1834, 1874, 2307
BstZ17I GTATAC 2 cut(s) 554, 1849
BsuRI GGCC 4 cut(s) 491, 1412, 2019, 2537
BtgI CCRYGG 1 cut(s) 2230
BtgZI GCGATG 1 cut(s) 1645
BtsCI GGATG 4 cut(s) 845, 1056, 1672, 2237
BtsI GCAGTG 1 cut(s) 2488
BtsIMutI CAGTG 3 cut(s) 136, 1607, 2488
BveI ACCTGC 1 cut(s) 940
Cac8I GCNNGC 2 cut(s) 49, 1706
CaiI CAGNNNCTG 1 cut(s) 983
CfoI GCGC 3 cut(s) 363, 641, 1407
Cfr10I RCCGGY 1 cut(s) 257
Cfr13I GGNCC 4 cut(s) 426, 836, 1785, 2180
Csp6I GTAC 5 cut(s) 333, 457, 981, 1027, 2428
CspCI CAANNNNNGTGG 4 cut(s) 157, 192, 1561, 1596
CviAII CATG 9 cut(s) 417, 715, 1504, 1561, 1565, 1709, 1981, 2259, 2587
CviQI GTAC 5 cut(s) 333, 457, 981, 1027, 2428
DdeI CTNAG 7 cut(s) 1120, 1193, 1230, 1766, 1868, 2048, 2497
DraIII CACNNNGTG 1 cut(s) 1290
DrdI GACNNNNNNGTC 1 cut(s) 160
DseDI GACNNNNNNGTC 1 cut(s) 160
EaeI YGGCCR 2 cut(s) 489, 2535
Eam1104I CTCTTC 2 cut(s) 1471, 2413
EarI CTCTTC 2 cut(s) 1471, 2413
Ecl136II GAGCTC 1 cut(s) 1772
Eco130I CCWWGG 2 cut(s) 1995, 2158
Eco147I AGGCCT 1 cut(s) 2019
Eco24I GRGCYC 1 cut(s) 1774
Eco47I GGWCC 4 cut(s) 426, 836, 1785, 2180
Eco47III AGCGCT 1 cut(s) 1406
Eco53kI GAGCTC 1 cut(s) 1772
Eco57I CTGAAG 2 cut(s) 327, 1460
Eco88I CYCGRG 1 cut(s) 1267
Eco91I GGTNACC 1 cut(s) 1712
EcoICRI GAGCTC 1 cut(s) 1772
EcoO109I RGGNCCY 1 cut(s) 426
EcoO65I GGTNACC 1 cut(s) 1712
EcoRI GAATTC 1 cut(s) 1798
EcoRII CCWGG 1 cut(s) 1176
EcoT14I CCWWGG 2 cut(s) 1995, 2158
EcoT22I ATGCAT 3 cut(s) 1566, 2458, 2592
EcoT38I GRGCYC 1 cut(s) 1774
ErhI CCWWGG 2 cut(s) 1995, 2158
FaeI CATG 9 cut(s) 420, 718, 1507, 1564, 1568, 1712, 1984, 2262, 2590
FalI AAGNNNNNCTT 4 cut(s) 825, 857, 1979, 2011
FaqI GGGAC 2 cut(s) 1839, 2237
FatI CATG 9 cut(s) 416, 714, 1503, 1560, 1564, 1708, 1980, 2258, 2586
FauI CCCGC 1 cut(s) 2213
FblI GTMKAC 3 cut(s) 553, 763, 1848
Fnu4HI GCNGC 6 cut(s) 45, 52, 489, 1543, 1960, 2379
FokI GGATG 4 cut(s) 832, 1043, 1679, 2224
FriOI GRGCYC 1 cut(s) 1774
Fsp4HI GCNGC 6 cut(s) 45, 52, 489, 1543, 1960, 2379
FspBI CTAG 8 cut(s) 48, 278, 683, 1107, 1244, 1754, 1775, 2561
FspI TGCGCA 1 cut(s) 362
GlaI GCGC 3 cut(s) 362, 640, 1406
GluI GCNGC 6 cut(s) 45, 52, 489, 1543, 1960, 2379
HaeII RGCGCY 2 cut(s) 642, 1408
HaeIII GGCC 4 cut(s) 491, 1412, 2019, 2537
HapII CCGG 4 cut(s) 258, 272, 1358, 1944
HhaI GCGC 3 cut(s) 363, 641, 1407
Hin1II CATG 9 cut(s) 420, 718, 1507, 1564, 1568, 1712, 1984, 2262, 2590
Hin6I GCGC 3 cut(s) 361, 639, 1405
HinP1I GCGC 3 cut(s) 361, 639, 1405
HincII GTYRAC 1 cut(s) 165
HindII GTYRAC 1 cut(s) 165
HindIII AAGCTT 3 cut(s) 437, 883, 1702
HinfI GANTC 9 cut(s) 222, 309, 736, 787, 1459, 1969, 2095, 2111, 2244
HpaII CCGG 4 cut(s) 258, 272, 1358, 1944
HphI GGTGA 4 cut(s) 76, 118, 247, 830
Hpy166II GTNNAC 8 cut(s) 165, 209, 554, 764, 839, 1083, 1679, 1849
Hpy188I TCNGA 7 cut(s) 346, 991, 1047, 1479, 1834, 1885, 2521
Hpy8I GTNNAC 8 cut(s) 165, 209, 554, 764, 839, 1083, 1679, 1849
HpyCH4III ACNGT 5 cut(s) 323, 332, 461, 985, 1640
HpyCH4IV ACGT 1 cut(s) 1238
HpyF10VI GCNNNNNNNGC 6 cut(s) 107, 116, 1539, 1769, 1956, 2453
HpyF3I CTNAG 7 cut(s) 1120, 1193, 1230, 1766, 1868, 2048, 2497
HpySE526I ACGT 1 cut(s) 1238
Hsp92II CATG 9 cut(s) 420, 718, 1507, 1564, 1568, 1712, 1984, 2262, 2590
HspAI GCGC 3 cut(s) 361, 639, 1405
Kpn2I TCCGGA 2 cut(s) 271, 1357
KpnI GGTACC 1 cut(s) 336
LmnI GCTCC 2 cut(s) 274, 889
Lsp1109I GCAGC 4 cut(s) 38, 1554, 1971, 2365
LweI GCATC 1 cut(s) 2246
MaeI CTAG 8 cut(s) 48, 278, 683, 1107, 1244, 1754, 1775, 2561
MaeII ACGT 1 cut(s) 1238
MaeIII GTNAC 8 cut(s) 131, 223, 310, 1052, 1090, 1640, 1712, 2397
MbiI CCGCTC 2 cut(s) 2178, 2220
MfeI CAATTG 1 cut(s) 650
MflI RGATCY 4 cut(s) 591, 1834, 1874, 2307
MhlI GDGCHC 2 cut(s) 11, 1774
MlyI GAGTC 3 cut(s) 231, 318, 730
MmeI TCCRAC 2 cut(s) 1616, 2195
Mph1103I ATGCAT 3 cut(s) 1566, 2458, 2592
MroI TCCGGA 2 cut(s) 271, 1357
MroXI GAANNNNTTC 2 cut(s) 2422, 2515
MslI CAYNNNNRTG 1 cut(s) 1088
MspA1I CMGCKG 3 cut(s) 488, 906, 1197
MspI CCGG 4 cut(s) 258, 272, 1358, 1944
MspR9I CCNGG 1 cut(s) 1178
MunI CAATTG 1 cut(s) 650
MvaI CCWGG 1 cut(s) 1178
MvnI CGCG 1 cut(s) 1664
MwoI GCNNNNNNNGC 6 cut(s) 107, 116, 1539, 1769, 1956, 2453
NheI GCTAGC 1 cut(s) 47
NlaIII CATG 9 cut(s) 420, 718, 1507, 1564, 1568, 1712, 1984, 2262, 2590
NlaIV GGNNCC 5 cut(s) 262, 334, 427, 478, 1786
NmuCI GTSAC 5 cut(s) 131, 223, 310, 1052, 1090
NsbI TGCGCA 1 cut(s) 362
NsiI ATGCAT 3 cut(s) 1566, 2458, 2592
NspI RCATGY 3 cut(s) 718, 1564, 2590
NspV TTCGAA 1 cut(s) 2013
OliI CACNNNNGTG 1 cut(s) 1088
PceI AGGCCT 1 cut(s) 2019
PciI ACATGT 1 cut(s) 714
PdmI GAANNNNTTC 2 cut(s) 2422, 2515
PfeI GAWTC 6 cut(s) 787, 1459, 1969, 2095, 2111, 2244
PflMI CCANNNNNTGG 1 cut(s) 855
PkrI GCNGC 6 cut(s) 46, 53, 490, 1544, 1961, 2380
PleI GAGTC 3 cut(s) 230, 317, 730
PpsI GAGTC 3 cut(s) 230, 317, 730
PpuMI RGGWCCY 1 cut(s) 426
PscI ACATGT 1 cut(s) 714
Psp124BI GAGCTC 1 cut(s) 1774
Psp5II RGGWCCY 1 cut(s) 426
Psp6I CCWGG 1 cut(s) 1176
PspEI GGTNACC 1 cut(s) 1712
PspGI CCWGG 1 cut(s) 1176
PspN4I GGNNCC 5 cut(s) 262, 334, 427, 478, 1786
PspPI GGNCC 4 cut(s) 426, 836, 1785, 2180
PspPPI RGGWCCY 1 cut(s) 426
PstNI CAGNNNCTG 1 cut(s) 983
PsuI RGATCY 4 cut(s) 591, 1834, 1874, 2307
RsaI GTAC 5 cut(s) 334, 458, 982, 1028, 2429
RsaNI GTAC 5 cut(s) 333, 457, 981, 1027, 2428
RseI CAYNNNNRTG 1 cut(s) 1088
SacI GAGCTC 1 cut(s) 1774
SatI GCNGC 6 cut(s) 45, 52, 489, 1543, 1960, 2379
Sau96I GGNCC 4 cut(s) 426, 836, 1785, 2180
SchI GAGTC 3 cut(s) 231, 318, 730
ScrFI CCNGG 1 cut(s) 1178
SduI GDGCHC 2 cut(s) 11, 1774
SfaNI GCATC 1 cut(s) 2246
SfuI TTCGAA 1 cut(s) 2013
SinI GGWCC 4 cut(s) 426, 836, 1785, 2180
SmiMI CAYNNNNRTG 1 cut(s) 1088
SmlI CTYRAG 2 cut(s) 1307, 1537
SmoI CTYRAG 2 cut(s) 1307, 1537
SpeI ACTAGT 1 cut(s) 1106
SseBI AGGCCT 1 cut(s) 2019
SsiI CCGC 8 cut(s) 44, 488, 906, 1197, 1664, 1761, 2178, 2220
SspI AATATT 1 cut(s) 1516
SspMI CTAG 8 cut(s) 48, 278, 683, 1107, 1244, 1754, 1775, 2561
SstI GAGCTC 1 cut(s) 1774
StuI AGGCCT 1 cut(s) 2019
StyD4I CCNGG 1 cut(s) 1176
StyI CCWWGG 2 cut(s) 1995, 2158
TaaI ACNGT 5 cut(s) 323, 332, 461, 985, 1640
TaiI ACGT 1 cut(s) 1241
TaqI TCGA 6 cut(s) 220, 1859, 2013, 2216, 2433, 2583
TauI GCSGC 2 cut(s) 47, 491
TfiI GAWTC 6 cut(s) 787, 1459, 1969, 2095, 2111, 2244
TscAI CASTG 3 cut(s) 136, 1614, 2488
TseFI GTSAC 5 cut(s) 131, 223, 310, 1052, 1090
TseI GCWGC 4 cut(s) 51, 1542, 1959, 2378
Tsp45I GTSAC 5 cut(s) 131, 223, 310, 1052, 1090
TspDTI ATGAA 7 cut(s) 383, 604, 1458, 1683, 2314, 2326, 2478
TspGWI ACGGA 2 cut(s) 402, 2219
TspRI CASTG 3 cut(s) 136, 1614, 2488
Van91I CCANNNNNTGG 1 cut(s) 855
VpaK11BI GGWCC 4 cut(s) 426, 836, 1785, 2180
XbaI TCTAGA 1 cut(s) 1774
XceI RCATGY 3 cut(s) 718, 1564, 2590
XcmI CCANNNNNNNNNTGG 2 cut(s) 852, 1818
XmiI GTMKAC 3 cut(s) 553, 763, 1848
XmnI GAANNNNTTC 2 cut(s) 2422, 2515
XspI CTAG 8 cut(s) 48, 278, 683, 1107, 1244, 1754, 1775, 2561
Zsp2I ATGCAT 3 cut(s) 1566, 2458, 2592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.