Rorug05G0082000

L-ascorbate oxidase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
7082731 .. 7083048
318 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0082000.1

Sequence Viewer

Length: 318 bp
ATGGAAACATTCACAAGAAAGAAGCCAACAGATGAGATGTTTGGGGACATCAGTTTGAAGCAATGGGTTGCAAATTCACCATTACTTGATGTTGTGGATGCCAACTTACTTGGGACAGAAGAAGGGGATCGTGAATTTGAGAACAAGAGGGAGTGTTTATCATCCATTATGAGATTAGCTCTAACTTGTTCCTCCGAATCACCAGAAGGGAGGATAAATATGCAAGAGGCTCTAGCTACTCTAAACAAAATTAAGATCAAGTTTTTCAAGGACGCTGCTGCAGGAGGAGTTGTGGTGTTGAACCATCCACTTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

105

Amino Acids

11.67

Weight (kDa)

5.15

Isoelectric Point (pI)

40.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 135
AcsI RAATTY 2 cut(s) 73, 134
AgsI TTSAA 3 cut(s) 58, 268, 301
AluBI AGCT 2 cut(s) 179, 236
AluI AGCT 2 cut(s) 179, 236
AlwI GGATC 1 cut(s) 135
ApeKI GCWGC 2 cut(s) 275, 278
ApoI RAATTY 2 cut(s) 73, 134
AsuHPI GGTGA 2 cut(s) 69, 192
BbvI GCAGC 2 cut(s) 262, 265
BccI CCATC 1 cut(s) 312
BfaI CTAG 1 cut(s) 233
BfmI CTRYAG 1 cut(s) 279
BisI GCNGC 2 cut(s) 276, 279
BlsI GCNGC 2 cut(s) 277, 280
BmsI GCATC 1 cut(s) 88
BplI GAGNNNNNCTC 2 cut(s) 163, 195
BsaXI ACNNNNNCTCC 4 cut(s) 276, 279, 306, 309
Bse3DI GCAATG 1 cut(s) 68
BseGI GGATG 3 cut(s) 103, 161, 304
BseMI GCAATG 1 cut(s) 68
BseRI GAGGAG 1 cut(s) 300
BseXI GCAGC 2 cut(s) 262, 265
BslFI GGGAC 2 cut(s) 59, 127
BsmFI GGGAC 2 cut(s) 59, 127
Bsp143I GATC 2 cut(s) 127, 255
BspMAI CTGCAG 1 cut(s) 283
BspPI GGATC 1 cut(s) 135
BsrDI GCAATG 1 cut(s) 68
BssMI GATC 2 cut(s) 127, 255
BstF5I GGATG 3 cut(s) 103, 161, 304
BstKTI GATC 2 cut(s) 130, 258
BstMBI GATC 2 cut(s) 127, 255
BstSFI CTRYAG 1 cut(s) 279
BstV1I GCAGC 2 cut(s) 262, 265
BtsCI GGATG 3 cut(s) 103, 161, 304
CseI GACGC 1 cut(s) 281
CviJI RGCY 4 cut(s) 25, 179, 230, 236
CviKI_1 RGCY 4 cut(s) 25, 179, 230, 236
DpnI GATC 2 cut(s) 129, 257
DpnII GATC 2 cut(s) 127, 255
FaiI YATR 2 cut(s) 170, 221
FaqI GGGAC 2 cut(s) 59, 127
Fnu4HI GCNGC 2 cut(s) 276, 279
FokI GGATG 3 cut(s) 110, 148, 291
Fsp4HI GCNGC 2 cut(s) 276, 279
FspBI CTAG 1 cut(s) 233
GluI GCNGC 2 cut(s) 276, 279
HgaI GACGC 1 cut(s) 281
HinfI GANTC 1 cut(s) 197
HphI GGTGA 2 cut(s) 69, 192
Hpy188I TCNGA 1 cut(s) 196
Hpy188III TCNNGA 1 cut(s) 131
HpyAV CCTTC 2 cut(s) 116, 200
HpyCH4V TGCA 3 cut(s) 71, 223, 281
Kzo9I GATC 2 cut(s) 127, 255
LpnPI CCDG 2 cut(s) 216, 267
Lsp1109I GCAGC 2 cut(s) 262, 265
LweI GCATC 1 cut(s) 88
MaeI CTAG 1 cut(s) 233
MalI GATC 2 cut(s) 129, 257
MboI GATC 2 cut(s) 127, 255
MboII GAAGA 1 cut(s) 131
MluCI AATT 3 cut(s) 73, 134, 249
MnlI CCTC 5 cut(s) 141, 202, 204, 220, 278
MseI TTAA 1 cut(s) 252
NdeII GATC 2 cut(s) 127, 255
PfeI GAWTC 1 cut(s) 197
PkrI GCNGC 2 cut(s) 277, 280
PstI CTGCAG 1 cut(s) 283
SaqAI TTAA 1 cut(s) 252
SatI GCNGC 2 cut(s) 276, 279
Sau3AI GATC 2 cut(s) 127, 255
SetI ASST 2 cut(s) 181, 238
SfaNI GCATC 1 cut(s) 88
SfcI CTRYAG 1 cut(s) 279
Sse9I AATT 3 cut(s) 73, 134, 249
SspMI CTAG 1 cut(s) 233
TasI AATT 3 cut(s) 73, 134, 249
TfiI GAWTC 1 cut(s) 197
Tru1I TTAA 1 cut(s) 252
Tru9I TTAA 1 cut(s) 252
TseI GCWGC 2 cut(s) 275, 278
XapI RAATTY 2 cut(s) 73, 134
XspI CTAG 1 cut(s) 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.