Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0009240

Physical Location & Seq

Genomic Coordinates Forward (+)

10074679 .. 10078820

Gene Structure 4142 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0113000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGCCTCCAGCGCCGCCGGACGCGGTGGTCCGCAACCGCTTCTTAGGGTTCCTCATCTGGCAATCCATCCCCTCCACCCTCATTTTCCTCCTCTCCGCTCTCTCCTCCTCCCCCTCAAAACCCGCTTTCCCATTCGCCCCATGGTTCTTCGCGGTAATTACCTTCCTGTCCTTCCACCTCTCCCAGCTCCTCTTCTCCGCCTCCCTCTCTCTCATCTCCTCCACCCACCCCCACCCACTGCTCTCGCCTCTCAAGCTCTCCCTCGAGCTCATACGCTTCCTCTTCGTTCCCGGCGGCTCCGATTTGACCGGGTCGCCGGGTTCCCGGGTCCGGGTTAGGGTCACCGTCCGCTTCGTGGCGTTTCTGGCTGCGGCGGCGGTGTCCGGGTCCGTTGCGGCGGTTTCGGTCTGCGGGGAGCTTGGTGGTGGGGTTTGGGGGATTGGGAGAGTAGGGTTTAGGGGTTTTGTGATGGGTTTGCTTTATGGGTTGTATTATGTGTATAAGCGCAGGTGGGTCTTGGAGTTCCCCATTATTCAGCGTCCGCCATTTTTTAGCTTCAAGATGGGTCTCCCCACGGCTATCACAAGATCCTTAAAGCTGTCCGGTGTGGCATACCTAGTCTCAGCTATTCTGGTGGTGTTCCTTCCCCATGAGTTTCACAACAGAGTTACAATTGGAAGGTTGATTGCGGAGCAGATTACCTTCTACATTGGGAGTTTCTTGGTGTTTCTCTGCTGGGAACTAAGTCACCATTTACATCAGGTGCTTAATACCAAGAGATGCATATTTGCGCCGCCTAAAGGATCAGCTGCAGCAGAAACAAATCCAACTGAGCATCTTCTTGCAGCTTTGGAGGAGAGCACTCCTAATTCTCTTCCTCAGTATCTTGCATATCTTGATCTCTGCATGATTTGTGAGAATAATGTTGATACTTGGCGACGAGCTGCCTTTTTCGAAGAAAGTGGTGAAACTTACAAAAGGGTTGTATCTGTATGCTTGCGGCCTCTGGAGCAGCTTGCATCAAAGCTGGGTGATGGCTTGGAAAGTCCTGTTAATGGAAAATCCCAAATATCCAATCAGTTACTGTCGCCAACTGACCAGCGACTAGATTCAAAATACTCTGAACCCTTCGACAACTTCCAGCTATATGCATGGTGTGCCTGGTCAGCTGCTTCACTGACTGCACGCTCAAATACGGAGGACAGATTTGGGGTTGCCCAGAGATCGGGTAGTAATGCTGCTGTGATCTCAACACTGATCTCTTGCCTTCTTGCTGTTGAAACATACATGGGAAAGAAGACCAATGTTCCTGCACAGTTTATGGGGCCAGCTAGTATCAAATGGGCAACCTCGAGTGTGGGAAATGTTGGCGTGGCTAAAAAGAGAGTTGGCCCTATCCATCCCAAAGCATATGCCCTTGCCGATGTCCTCAAAAACTCAATCTACCATATTGTGTCCGCATGCCATGATCAGATGGTGAGCAGTGCCAAAACAGGCGTGCTTGAGAAGTATTGGGTCATCGAAGGCAAGCCTCCTTTTGGGTCACACGAGCTTCTGGTGCAGAAATTGCGTCTTTTCCTAGATTTTCGAGCTAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

532

Amino Acids

58.5

Weight (kDa)

9.4

Isoelectric Point (pI)

44.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ndc1_Nup	PF09531	154 - 356	1.1e-15	Nucleoporin protein Ndc1-Nup
Ndc1_Nup	PF09531	366 - 487	1.4e-08	Nucleoporin protein Ndc1-Nup

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009240)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14750
fragaria_vesca	FvH4_3g17610 FvH4_3g17610 FvH4_3g17610
malus_domestica	MD03G1250800.v1.1 MD11G1271000.v1.1
prunus_persica	Prupe.4G155500_v2.0.a1
pyrus_communis	pycom03g19850 pycom11g23970
rosa_chinensis	RchiOBHm_Chr5g0029311
rosa_laevigata	RLG00000033152
rosa_multiflora	Rmu_co8357187.1_g000001 Rmu_sc0004205.1_g000001
rosa_roxburghii	Rroxscaffold_1G00050700
rosa_rugosa	Rorug05G0113000 Rorug05G0113100 Rorug05G0113200
rosa_samantha	Rh5AG205300 Rh5BG203800 Rh5CG225200 Rh5DG207400
rosa_wichuraiana	Rw5G018660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	498
AasI	GACNNNNNNGTC	1 cut(s)	26
Acc36I	ACCTGC	1 cut(s)	498
AccBSI	CCGCTC	1 cut(s)	98
AccII	CGCG	2 cut(s)	23, 152
AclWI	GGATC	2 cut(s)	582, 811
AfiI	CCNNNNNNNGG	8 cut(s)	330, 331, 337, 355, 800, 1055, 1225, 1538
AgsI	TTSAA	3 cut(s)	559, 1113, 1280
AjnI	CCWGG	1 cut(s)	1160
Alw21I	GWGCWC	2 cut(s)	270, 863
Alw26I	GTCTC	2 cut(s)	572, 625
AlwI	GGATC	2 cut(s)	582, 811
AlwNI	CAGNNNCTG	1 cut(s)	1084
Ama87I	CYCGRG	3 cut(s)	263, 324, 1351
AoxI	GGCC	3 cut(s)	1001, 1325, 1390
ApeKI	GCWGC	8 cut(s)	368, 809, 812, 845, 944, 1012, 1169, 1238
AspLEI	GCGC	3 cut(s)	13, 507, 793
AspS9I	GGNCC	5 cut(s)	28, 328, 387, 1325, 1391
AsuC2I	CCSGG	7 cut(s)	291, 310, 318, 325, 326, 332, 385
AsuHPI	GGTGA	5 cut(s)	334, 740, 977, 1043, 1489
AsuII	TTCGAA	1 cut(s)	954
AsuNHI	GCTAGC	1 cut(s)	1592
AvaI	CYCGRG	3 cut(s)	263, 324, 1351
AvaII	GGWCC	3 cut(s)	28, 328, 387
BanII	GRGCYC	1 cut(s)	270
BauI	CACGAG	1 cut(s)	1547
BbsI	GAAGAC	1 cut(s)	1304
Bbv12I	GWGCWC	2 cut(s)	270, 863
BbvI	GCAGC	8 cut(s)	355, 796, 824, 857, 931, 1024, 1156, 1225
BccI	CCATC	6 cut(s)	74, 463, 556, 1028, 1407, 1468
BceAI	ACGGC	1 cut(s)	591
BciT130I	CCWGG	1 cut(s)	1162
BclI	TGATCA	1 cut(s)	1468
BcnI	CCSGG	7 cut(s)	291, 310, 318, 325, 326, 332, 385
BcoDI	GTCTC	2 cut(s)	572, 625
BfaI	CTAG	5 cut(s)	617, 1106, 1332, 1580, 1593
BfmI	CTRYAG	1 cut(s)	810
BfoI	RGCGCY	1 cut(s)	14
BfuAI	ACCTGC	1 cut(s)	498
Bme1390I	CCNGG	8 cut(s)	291, 310, 318, 325, 326, 332, 385, 1162
Bme18I	GGWCC	3 cut(s)	28, 328, 387
BmeT110I	CYCGRG	3 cut(s)	263, 324, 1351
BmgT120I	GGNCC	5 cut(s)	28, 328, 387, 1325, 1391
BmiI	GGNNCC	6 cut(s)	50, 298, 322, 329, 388, 1326
BmrFI	CCNGG	8 cut(s)	291, 310, 318, 325, 326, 332, 385, 1162
BmsI	GCATC	3 cut(s)	770, 844, 1028
BmtI	GCTAGC	1 cut(s)	1596
BpiI	GAAGAC	1 cut(s)	1304
BpmI	CTGGAG	1 cut(s)	1028
Bpu14I	TTCGAA	1 cut(s)	954
BpuEI	CTTGAG	2 cut(s)	236, 1523
BpuMI	CCSGG	7 cut(s)	291, 310, 318, 325, 326, 332, 385
BsaI	GGTCTC	1 cut(s)	572
BsaJI	CCNNGG	3 cut(s)	140, 324, 573
BsaWI	WCCGGW	1 cut(s)	602
Bsc4I	CCNNNNNNNGG	8 cut(s)	330, 331, 337, 355, 800, 1055, 1225, 1538
BseBI	CCWGG	1 cut(s)	1162
BseDI	CCNNGG	3 cut(s)	140, 324, 573
BseGI	GGATG	2 cut(s)	66, 1399
BseLI	CCNNNNNNNGG	8 cut(s)	330, 331, 337, 355, 800, 1055, 1225, 1538
BseMII	CTCAG	3 cut(s)	636, 822, 893
BseRI	GAGGAG	6 cut(s)	80, 94, 97, 179, 208, 869
BseXI	GCAGC	8 cut(s)	355, 796, 824, 857, 931, 1024, 1156, 1225
BseYI	CCCAGC	3 cut(s)	183, 735, 1027
BsgI	GTGCAG	3 cut(s)	1167, 1296, 1580
Bsh1236I	CGCG	2 cut(s)	23, 152
BshFI	GGCC	3 cut(s)	1003, 1327, 1392
BsiHKAI	GWGCWC	2 cut(s)	270, 863
BsiHKCI	CYCGRG	3 cut(s)	263, 324, 1351
BsiSI	CCGG	8 cut(s)	17, 291, 309, 317, 325, 331, 384, 603
BslI	CCNNNNNNNGG	8 cut(s)	330, 331, 337, 355, 800, 1055, 1225, 1538
BsmAI	GTCTC	2 cut(s)	572, 625
BsnI	GGCC	3 cut(s)	1003, 1327, 1392
Bso31I	GGTCTC	1 cut(s)	572
BsoBI	CYCGRG	3 cut(s)	263, 324, 1351
Bsp119I	TTCGAA	1 cut(s)	954
Bsp1286I	GDGCHC	2 cut(s)	270, 863
Bsp143I	GATC	7 cut(s)	587, 803, 898, 1223, 1245, 1257, 1468
Bsp19I	CCATGG	1 cut(s)	140
BspANI	GGCC	3 cut(s)	1003, 1327, 1392
BspCNI	CTCAG	3 cut(s)	635, 823, 892
BspFNI	CGCG	2 cut(s)	23, 152
BspLI	GGNNCC	6 cut(s)	50, 298, 322, 329, 388, 1326
BspMAI	CTGCAG	1 cut(s)	814
BspMI	ACCTGC	1 cut(s)	498
BspOI	GCTAGC	1 cut(s)	1596
BspPI	GGATC	2 cut(s)	582, 811
BspT104I	TTCGAA	1 cut(s)	954
BspTNI	GGTCTC	1 cut(s)	572
BsrBI	CCGCTC	1 cut(s)	98
BssECI	CCNNGG	3 cut(s)	140, 324, 573
BssMI	GATC	7 cut(s)	587, 803, 898, 1223, 1245, 1257, 1468
BssSI	CACGAG	1 cut(s)	1547
BssT1I	CCWWGG	1 cut(s)	140
Bst2BI	CACGAG	1 cut(s)	1547
Bst2UI	CCWGG	1 cut(s)	1162
Bst4CI	ACNGT	3 cut(s)	346, 1086, 1317
Bst6I	CTCTTC	3 cut(s)	197, 287, 879
BstAPI	GCANNNNNTGC	2 cut(s)	1157, 1567
BstBI	TTCGAA	1 cut(s)	954
BstC8I	GCNNGC	8 cut(s)	998, 1017, 1186, 1329, 1462, 1499, 1529, 1594
BstDEI	CTNAG	5 cut(s)	43, 622, 743, 831, 879
BstDSI	CCRYGG	2 cut(s)	140, 573
BstEII	GGTNACC	1 cut(s)	340
BstF5I	GGATG	2 cut(s)	66, 1399
BstFNI	CGCG	2 cut(s)	23, 152
BstH2I	RGCGCY	1 cut(s)	14
BstHHI	GCGC	3 cut(s)	13, 507, 793
BstKTI	GATC	7 cut(s)	590, 806, 901, 1226, 1248, 1260, 1471
BstMAI	GTCTC	2 cut(s)	572, 625
BstMBI	GATC	7 cut(s)	587, 803, 898, 1223, 1245, 1257, 1468
BstMWI	GCNNNNNNNGC	9 cut(s)	10, 253, 365, 374, 1009, 1157, 1166, 1558, 1567
BstNI	CCWGG	1 cut(s)	1162
BstNSI	RCATGY	1 cut(s)	1464
BstPI	GGTNACC	1 cut(s)	340
BstSCI	CCNGG	8 cut(s)	289, 308, 316, 323, 324, 330, 383, 1160
BstSFI	CTRYAG	1 cut(s)	810
BstUI	CGCG	2 cut(s)	23, 152
BstV1I	GCAGC	8 cut(s)	355, 796, 824, 857, 931, 1024, 1156, 1225
BstV2I	GAAGAC	1 cut(s)	1304
BstX2I	RGATCY	1 cut(s)	587
BstYI	RGATCY	1 cut(s)	587
BsuRI	GGCC	3 cut(s)	1003, 1327, 1392
BtgI	CCRYGG	2 cut(s)	140, 573
BtsCI	GGATG	2 cut(s)	66, 1399
BtsI	GCAGTG	2 cut(s)	236, 1489
BtsIMutI	CAGTG	4 cut(s)	236, 1175, 1253, 1489
BveI	ACCTGC	1 cut(s)	498
Cac8I	GCNNGC	8 cut(s)	998, 1017, 1186, 1329, 1462, 1499, 1529, 1594
CaiI	CAGNNNCTG	1 cut(s)	1084
CfoI	GCGC	3 cut(s)	13, 507, 793
Cfr13I	GGNCC	5 cut(s)	28, 328, 387, 1325, 1391
Cfr9I	CCCGGG	1 cut(s)	324
CseI	GACGC	3 cut(s)	29, 527, 1559
CviAII	CATG	7 cut(s)	141, 650, 907, 1152, 1288, 1461, 1466
DdeI	CTNAG	5 cut(s)	43, 622, 743, 831, 879
DpnI	GATC	7 cut(s)	589, 805, 900, 1225, 1247, 1259, 1470
DpnII	GATC	7 cut(s)	587, 803, 898, 1223, 1245, 1257, 1468
DrdI	GACNNNNNNGTC	1 cut(s)	26
DseDI	GACNNNNNNGTC	1 cut(s)	26
Eam1104I	CTCTTC	3 cut(s)	197, 287, 879
EarI	CTCTTC	3 cut(s)	197, 287, 879
EciI	GGCGGA	2 cut(s)	187, 531
Ecl136II	GAGCTC	1 cut(s)	268
Eco130I	CCWWGG	1 cut(s)	140
Eco24I	GRGCYC	1 cut(s)	270
Eco31I	GGTCTC	1 cut(s)	572
Eco47I	GGWCC	3 cut(s)	28, 328, 387
Eco53kI	GAGCTC	1 cut(s)	268
Eco88I	CYCGRG	3 cut(s)	263, 324, 1351
Eco91I	GGTNACC	1 cut(s)	340
EcoICRI	GAGCTC	1 cut(s)	268
EcoO65I	GGTNACC	1 cut(s)	340
EcoRII	CCWGG	1 cut(s)	1160
EcoT14I	CCWWGG	1 cut(s)	140
EcoT22I	ATGCAT	2 cut(s)	785, 1153
EcoT38I	GRGCYC	1 cut(s)	270
ErhI	CCWWGG	1 cut(s)	140
FaeI	CATG	7 cut(s)	144, 653, 910, 1155, 1291, 1464, 1469
FatI	CATG	7 cut(s)	140, 649, 906, 1151, 1287, 1460, 1465
FauI	CCCGC	2 cut(s)	130, 404
FauNDI	CATATG	1 cut(s)	1411
FbaI	TGATCA	1 cut(s)	1468
FokI	GGATG	2 cut(s)	53, 1386
FriOI	GRGCYC	1 cut(s)	270
FspBI	CTAG	5 cut(s)	617, 1106, 1332, 1580, 1593
GlaI	GCGC	3 cut(s)	12, 506, 792
GsaI	CCCAGC	3 cut(s)	187, 739, 1031
GsuI	CTGGAG	1 cut(s)	1028
HaeII	RGCGCY	1 cut(s)	14
HaeIII	GGCC	3 cut(s)	1003, 1327, 1392
HapII	CCGG	8 cut(s)	17, 291, 309, 317, 325, 331, 384, 603
HgaI	GACGC	3 cut(s)	29, 527, 1559
HhaI	GCGC	3 cut(s)	13, 507, 793
Hin1II	CATG	7 cut(s)	144, 653, 910, 1155, 1291, 1464, 1469
Hin6I	GCGC	3 cut(s)	11, 505, 791
HinP1I	GCGC	3 cut(s)	11, 505, 791
HinfI	GANTC	1 cut(s)	1109
HpaII	CCGG	8 cut(s)	17, 291, 309, 317, 325, 331, 384, 603
HphI	GGTGA	5 cut(s)	334, 740, 977, 1043, 1489
Hpy188I	TCNGA	3 cut(s)	301, 1123, 1473
Hpy188III	TCNNGA	3 cut(s)	559, 896, 1007
Hpy99I	CGWCG	1 cut(s)	942
HpyAV	CCTTC	8 cut(s)	172, 181, 653, 672, 712, 1138, 1277, 1517
HpyCH4III	ACNGT	3 cut(s)	346, 1086, 1317
HpyF10VI	GCNNNNNNNGC	9 cut(s)	10, 253, 365, 374, 1009, 1157, 1166, 1558, 1567
HpyF3I	CTNAG	5 cut(s)	43, 622, 743, 831, 879
Hsp92II	CATG	7 cut(s)	144, 653, 910, 1155, 1291, 1464, 1469
HspAI	GCGC	3 cut(s)	11, 505, 791
Ksp22I	TGATCA	1 cut(s)	1468
Kzo9I	GATC	7 cut(s)	587, 803, 898, 1223, 1245, 1257, 1468
LmnI	GCTCC	5 cut(s)	192, 302, 415, 691, 1009
Lsp1109I	GCAGC	8 cut(s)	355, 796, 824, 857, 931, 1024, 1156, 1225
LweI	GCATC	3 cut(s)	770, 844, 1028
MaeI	CTAG	5 cut(s)	617, 1106, 1332, 1580, 1593
MaeIII	GTNAC	5 cut(s)	340, 667, 746, 1080, 1542
MalI	GATC	7 cut(s)	589, 805, 900, 1225, 1247, 1259, 1470
MbiI	CCGCTC	1 cut(s)	98
MboI	GATC	7 cut(s)	587, 803, 898, 1223, 1245, 1257, 1468
MboII	GAAGA	7 cut(s)	139, 184, 274, 830, 866, 968, 1309
MfeI	CAATTG	1 cut(s)	672
MflI	RGATCY	1 cut(s)	587
MhlI	GDGCHC	2 cut(s)	270, 863
MluCI	AATT	4 cut(s)	156, 672, 868, 1565
MmeI	TCCRAC	1 cut(s)	851
Mph1103I	ATGCAT	2 cut(s)	785, 1153
MseI	TTAA	3 cut(s)	593, 768, 1053
MspA1I	CMGCKG	2 cut(s)	809, 1169
MspI	CCGG	8 cut(s)	17, 291, 309, 317, 325, 331, 384, 603
MspR9I	CCNGG	8 cut(s)	291, 310, 318, 325, 326, 332, 385, 1162
MunI	CAATTG	1 cut(s)	672
MvaI	CCWGG	1 cut(s)	1162
MvnI	CGCG	2 cut(s)	23, 152
MwoI	GCNNNNNNNGC	9 cut(s)	10, 253, 365, 374, 1009, 1157, 1166, 1558, 1567
NciI	CCSGG	7 cut(s)	291, 310, 318, 325, 326, 332, 385
NcoI	CCATGG	1 cut(s)	140
NdeI	CATATG	1 cut(s)	1411
NdeII	GATC	7 cut(s)	587, 803, 898, 1223, 1245, 1257, 1468
NheI	GCTAGC	1 cut(s)	1592
NlaIII	CATG	7 cut(s)	144, 653, 910, 1155, 1291, 1464, 1469
NlaIV	GGNNCC	6 cut(s)	50, 298, 322, 329, 388, 1326
NmuCI	GTSAC	3 cut(s)	340, 746, 1542
NsiI	ATGCAT	2 cut(s)	785, 1153
NspI	RCATGY	1 cut(s)	1464
NspV	TTCGAA	1 cut(s)	954
PaeI	GCATGC	1 cut(s)	1464
PaeR7I	CTCGAG	2 cut(s)	263, 1351
PaqCI	CACCTGC	1 cut(s)	498
PfeI	GAWTC	1 cut(s)	1109
PflFI	GACNNNGTC	1 cut(s)	310
Psp124BI	GAGCTC	1 cut(s)	270
Psp6I	CCWGG	1 cut(s)	1160
PspEI	GGTNACC	1 cut(s)	340
PspFI	CCCAGC	3 cut(s)	183, 735, 1027
PspGI	CCWGG	1 cut(s)	1160
PspN4I	GGNNCC	6 cut(s)	50, 298, 322, 329, 388, 1326
PspPI	GGNCC	5 cut(s)	28, 328, 387, 1325, 1391
PspXI	VCTCGAGB	2 cut(s)	263, 1351
PstI	CTGCAG	1 cut(s)	814
PstNI	CAGNNNCTG	1 cut(s)	1084
PsuI	RGATCY	1 cut(s)	587
PsyI	GACNNNGTC	1 cut(s)	310
PvuII	CAGCTG	2 cut(s)	809, 1169
SacI	GAGCTC	1 cut(s)	270
SaqAI	TTAA	3 cut(s)	593, 768, 1053
Sau3AI	GATC	7 cut(s)	587, 803, 898, 1223, 1245, 1257, 1468
Sau96I	GGNCC	5 cut(s)	28, 328, 387, 1325, 1391
ScrFI	CCNGG	8 cut(s)	291, 310, 318, 325, 326, 332, 385, 1162
SduI	GDGCHC	2 cut(s)	270, 863
SfaNI	GCATC	3 cut(s)	770, 844, 1028
SfcI	CTRYAG	1 cut(s)	810
Sfr274I	CTCGAG	2 cut(s)	263, 1351
SfuI	TTCGAA	1 cut(s)	954
SinI	GGWCC	3 cut(s)	28, 328, 387
SlaI	CTCGAG	2 cut(s)	263, 1351
SmaI	CCCGGG	1 cut(s)	326
SmlI	CTYRAG	4 cut(s)	251, 263, 1351, 1502
SmoI	CTYRAG	4 cut(s)	251, 263, 1351, 1502
SphI	GCATGC	1 cut(s)	1464
Sse9I	AATT	4 cut(s)	156, 672, 868, 1565
SspMI	CTAG	5 cut(s)	617, 1106, 1332, 1580, 1593
SstI	GAGCTC	1 cut(s)	270
StyD4I	CCNGG	8 cut(s)	289, 308, 316, 323, 324, 330, 383, 1160
StyI	CCWWGG	1 cut(s)	140
TaaI	ACNGT	3 cut(s)	346, 1086, 1317
TaqI	TCGA	6 cut(s)	264, 954, 1131, 1352, 1521, 1588
TaqII	GACCGA	1 cut(s)	394
TasI	AATT	4 cut(s)	156, 672, 868, 1565
TauI	GCSGC	7 cut(s)	16, 297, 374, 377, 398, 796, 1003
TfiI	GAWTC	1 cut(s)	1109
Tru1I	TTAA	3 cut(s)	593, 768, 1053
Tru9I	TTAA	3 cut(s)	593, 768, 1053
TscAI	CASTG	4 cut(s)	243, 1182, 1260, 1489
TseFI	GTSAC	3 cut(s)	340, 746, 1542
TseI	GCWGC	8 cut(s)	368, 809, 812, 845, 944, 1012, 1169, 1238
Tsp45I	GTSAC	3 cut(s)	340, 746, 1542
TspGWI	ACGGA	2 cut(s)	379, 1211
TspMI	CCCGGG	1 cut(s)	324
TspRI	CASTG	4 cut(s)	243, 1182, 1260, 1489
Tth111I	GACNNNGTC	1 cut(s)	310
VpaK11BI	GGWCC	3 cut(s)	28, 328, 387
XceI	RCATGY	1 cut(s)	1464
XcmI	CCANNNNNNNNNTGG	1 cut(s)	138
XhoI	CTCGAG	2 cut(s)	263, 1351
XmaI	CCCGGG	1 cut(s)	324
XspI	CTAG	5 cut(s)	617, 1106, 1332, 1580, 1593
Zsp2I	ATGCAT	2 cut(s)	785, 1153

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.