Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0012907

Physical Location & Seq

Genomic Coordinates Forward (+)

11875510 .. 11877165

Gene Structure 1656 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0133000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGCTAGAAATGGCACCAAGGATTTCACAGCTCTTACTCCTTCCTATTCTTCTAGTTCTCTCCATTTCTTGTACAGCCTCAGCTTCATCCTCAGCTCCTGAGAACTTTGTTTCATGTCTTTTAAGCCATTCGCTCCCTTCTCACCCAATCGGTCCAGCAATTTACACTCCCAACAATGCTTCTTACTCTTCCGTTTTGGAATCCTACATCCGAAACCTCCGTTTCAACGAATCGTACACCCGAAAACCTTACCTTATTATCACCGCATTGCACGTATCCCATGTGCAACAAGCCATCCTTTGTGCTCAAAAGCACAACTTACAGATGAAAATTAGAAGCGGAGGCCACGATTACGAGGGTGTGTCGTATGTGGCTGAAGTCCCATTCTTCATCCTCGACCTGTTTAATCTTCGAACCATCAACGTAGACATCAAAACCGAGACTGCATGGGTCCAGGCCGGTGCTACTCTAGGCGAAGTTTACTACAGAATTTACGAGAAAAGCAAAGTCCATGGATTTCCCGCCGGTGTATGCCCCACAGTCGGTGTTGGAGGACACTTCAGTGGCGGTGGATATGGTAACATGATGAGAAAGTACGGCTTGTCAGTTGACAACATAGTCGATGCACAAATAGTTGATGTGCATGGAAGACTTCTTGATCGAAAATCGATGGGAGAAGACCTCTTTTGGGCCATCACCGGAGGCGGAGGAGCCAGCTTTGGAGTGGTGATCGCCTACAAGATCAACCTTGTACGCGTCCCAGAGACCGTTACTGTTTTCAGGGTTATAAGAACCTTGGAACAGAACGCAACTGACATTGTGTATCGTTGGCAATATGTCGCAAATAAGCTTGACAATGACTTGTTCATCAGGCTTACCATGGATGTTGTCAATGTAACTGGCTCTCAAACTGGAGAAAAGACTCTAAGAGCTACATTCAACGCCTTGTTTCTTGGAGACTCCGCAAGACTACTCACCGTGATGAACAAGAGTTTCCCTGAACTGGGTTTGGAGCAATCCGATTGCCAAGAAATGAGTTGGGTTGAATCGACGCTTTTCTGGACAAGCTTTGCAAACGGGACAGCTCCGGAGGCTTTGCTCTCTAGAGTTCCTCAAGTACTTACCCACTTGAAGAGGAAGTCGGACTACGTCAAGCAGCCAATTCCGAAAGCTGGTTTGAAGTGGATTATTCAGAAAATGATCGAGTTGCAGACGCCCATGTTGACTTTCAATCCTTACGGCGGAAGAATGGCTGAGATTGCGGCATCTGCAAAACCTTTTCCACATAGAGCTGGCAATCTCTGGAAGGTTCAGTATGCAACAAACTGGGACGCTTCTGGGTCCGAGGCTGCGGAGAAATACATCGATTTGACGAGGAAGTTGTTCGAGTACATGACTCCTTTCGTTTCCAAGAACCCGAGGGAAGCCTTCTTCAACTATAAAGATCTCGACATTGGGATCAACCATAATGACAAGGGAAGCTATTTTGAGGGAAGAGTTTTTGGGGTCAGGTATTTCAAGGAAAATTTCGATAAATTGGTGCTTATTAAGACCAAGGTTGATCCTGGTAATTTCTTTAGGAACGAACAAAGTATCCCTACTCTTCCATACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009889 GO:0009933 GO:0010014 GO:0010016 GO:0010072 GO:0010154 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040034 GO:0048316 GO:0048366 GO:0048367 GO:0048507 GO:0048508 GO:0048532 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0048859 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090421 GO:0090691 GO:0090709 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:1905428 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

537

Amino Acids

60.23

Weight (kDa)

8.79

Isoelectric Point (pI)

31.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	85 - 219	7.8e-22	FAD binding domain
BBE	PF08031	476 - 533	1e-17	Berberine and berberine like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53950
fragaria_vesca	FvH4_3g03540 FvH4_3g03540 FvH4_3g03580 FvH4_3g19410 FvH4_3g19410 FvH4_6g06070
rosa_chinensis	RchiOBHm_Chr5g0032661
rosa_laevigata	RLG00000033416
rosa_multiflora	Rmu_sc0002292.1_g000011
rosa_roxburghii	Rroxscaffold_1G00047410 Rroxscaffold_1G00047870
rosa_rugosa	Rorug05G0133000
rosa_samantha	Rh5AG225500 Rh5BG226700 Rh5CG254200 Rh5DG231300
rosa_wichuraiana	Rw5G020670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	788
AasI	GACNNNNNNGTC	1 cut(s)	617
AccB1I	GGYRCC	1 cut(s)	13
AccI	GTMKAC	1 cut(s)	426
AccII	CGCG	1 cut(s)	756
AccIII	TCCGGA	1 cut(s)	1087
AciI	CCGC	9 cut(s)	264, 339, 522, 567, 705, 963, 1242, 1262, 1352
AclWI	GGATC	2 cut(s)	1466, 1556
AcsI	RAATTY	2 cut(s)	489, 1525
AcuI	CTGAAG	2 cut(s)	396, 544
AcyI	GRCGYC	1 cut(s)	1214
AfaI	GTAC	6 cut(s)	73, 236, 596, 753, 1119, 1391
AfiI	CCNNNNNNNGG	6 cut(s)	542, 688, 1003, 1004, 1172, 1241
AflIII	ACRYGT	1 cut(s)	754
AgsI	TTSAA	8 cut(s)	226, 940, 1046, 1132, 1180, 1231, 1435, 1519
AjnI	CCWGG	2 cut(s)	453, 1564
AleI	CACNNNNGTG	1 cut(s)	561
AloI	GAACNNNNNNTCC	2 cut(s)	1578, 1610
Alw21I	GWGCWC	1 cut(s)	307
Alw26I	GTCTC	3 cut(s)	434, 758, 951
AlwI	GGATC	2 cut(s)	1466, 1556
AlwNI	CAGNNNCTG	1 cut(s)	98
Ama87I	CYCGRG	1 cut(s)	1417
Aor13HI	TCCGGA	1 cut(s)	1087
AoxI	GGCC	3 cut(s)	343, 456, 690
ApeKI	GCWGC	2 cut(s)	1156, 1349
ApoI	RAATTY	2 cut(s)	489, 1525
Asp700I	GAANNNNTTC	1 cut(s)	1382
AspS9I	GGNCC	4 cut(s)	152, 451, 690, 1341
AsuHPI	GGTGA	5 cut(s)	134, 253, 688, 739, 967
AsuII	TTCGAA	1 cut(s)	412
AvaI	CYCGRG	1 cut(s)	1417
AvaII	GGWCC	3 cut(s)	152, 451, 1341
BanI	GGYRCC	1 cut(s)	13
BarI	GAAGNNNNNNTAC	2 cut(s)	1130, 1162
BbsI	GAAGAC	2 cut(s)	655, 684
Bbv12I	GWGCWC	1 cut(s)	307
BbvCI	CCTCAGC	2 cut(s)	79, 91
BbvI	GCAGC	2 cut(s)	1168, 1336
BccI	CCATC	4 cut(s)	302, 425, 664, 701
BceAI	ACGGC	2 cut(s)	613, 1255
BciT130I	CCWGG	2 cut(s)	455, 1566
BciVI	GTATCC	2 cut(s)	286, 1604
BcoDI	GTCTC	3 cut(s)	434, 758, 951
BfaI	CTAG	5 cut(s)	5, 53, 470, 1104, 1612
BfmI	CTRYAG	1 cut(s)	484
BfuI	GTATCC	2 cut(s)	286, 1604
BglII	AGATCT	1 cut(s)	1444
BisI	GCNGC	3 cut(s)	1157, 1263, 1350
BlsI	GCNGC	3 cut(s)	1158, 1264, 1351
BmcAI	AGTACT	1 cut(s)	1119
Bme1390I	CCNGG	2 cut(s)	455, 1566
Bme18I	GGWCC	3 cut(s)	152, 451, 1341
BmeT110I	CYCGRG	1 cut(s)	1417
BmgT120I	GGNCC	4 cut(s)	152, 451, 690, 1341
BmiI	GGNNCC	4 cut(s)	15, 452, 712, 1342
BmrFI	CCNGG	2 cut(s)	455, 1566
BmrI	ACTGGG	2 cut(s)	1013, 1336
BmsI	GCATC	2 cut(s)	613, 1274
BmuI	ACTGGG	2 cut(s)	1013, 1336
BpiI	GAAGAC	2 cut(s)	655, 684
BplI	GAGNNNNNCTC	2 cut(s)	666, 698
BpmI	CTGGAG	1 cut(s)	933
Bpu10I	CCTNAGC	2 cut(s)	79, 91
Bpu14I	TTCGAA	1 cut(s)	412
BpuEI	CTTGAG	1 cut(s)	1098
Bsa29I	ATCGAT	2 cut(s)	668, 1365
BsaAI	YACGTR	1 cut(s)	274
BsaHI	GRCGYC	1 cut(s)	1214
BsaI	GGTCTC	1 cut(s)	758
BsaJI	CCNNGG	7 cut(s)	17, 511, 795, 879, 1344, 1418, 1554
BsaWI	WCCGGW	2 cut(s)	698, 1087
Bsc4I	CCNNNNNNNGG	6 cut(s)	542, 688, 1003, 1004, 1172, 1241
Bse118I	RCCGGY	2 cut(s)	458, 524
Bse1I	ACTGG	4 cut(s)	904, 916, 1008, 1331
Bse3DI	GCAATG	1 cut(s)	266
BseAI	TCCGGA	1 cut(s)	1087
BseBI	CCWGG	2 cut(s)	455, 1566
BseCI	ATCGAT	2 cut(s)	668, 1365
BseDI	CCNNGG	7 cut(s)	17, 511, 795, 879, 1344, 1418, 1554
BseGI	GGATG	5 cut(s)	86, 207, 294, 390, 889
BseLI	CCNNNNNNNGG	6 cut(s)	542, 688, 1003, 1004, 1172, 1241
BseMI	GCAATG	1 cut(s)	266
BseMII	CTCAG	4 cut(s)	90, 93, 105, 1245
BseNI	ACTGG	4 cut(s)	904, 916, 1008, 1331
BseRI	GAGGAG	1 cut(s)	723
BseXI	GCAGC	2 cut(s)	1168, 1336
Bsh1236I	CGCG	1 cut(s)	756
BshFI	GGCC	3 cut(s)	345, 458, 692
BshNI	GGYRCC	1 cut(s)	13
BshVI	ATCGAT	2 cut(s)	668, 1365
BsiHKAI	GWGCWC	1 cut(s)	307
BsiHKCI	CYCGRG	1 cut(s)	1417
BsiSI	CCGG	4 cut(s)	459, 525, 699, 1088
BslFI	GGGAC	4 cut(s)	365, 743, 1093, 1343
BslI	CCNNNNNNNGG	6 cut(s)	542, 688, 1003, 1004, 1172, 1241
BsmAI	GTCTC	3 cut(s)	434, 758, 951
BsmFI	GGGAC	4 cut(s)	365, 743, 1093, 1343
BsnI	GGCC	3 cut(s)	345, 458, 692
Bso31I	GGTCTC	1 cut(s)	758
BsoBI	CYCGRG	1 cut(s)	1417
Bsp119I	TTCGAA	1 cut(s)	412
Bsp1286I	GDGCHC	1 cut(s)	307
Bsp13I	TCCGGA	1 cut(s)	1087
Bsp1407I	TGTACA	1 cut(s)	71
Bsp143I	GATC	7 cut(s)	658, 729, 741, 1200, 1444, 1458, 1561
Bsp19I	CCATGG	2 cut(s)	511, 879
BspACI	CCGC	9 cut(s)	264, 339, 522, 567, 705, 963, 1242, 1262, 1352
BspANI	GGCC	3 cut(s)	345, 458, 692
BspCNI	CTCAG	4 cut(s)	91, 92, 104, 1246
BspDI	ATCGAT	2 cut(s)	668, 1365
BspEI	TCCGGA	1 cut(s)	1087
BspFNI	CGCG	1 cut(s)	756
BspLI	GGNNCC	4 cut(s)	15, 452, 712, 1342
BspPI	GGATC	2 cut(s)	1466, 1556
BspT104I	TTCGAA	1 cut(s)	412
BspT107I	GGYRCC	1 cut(s)	13
BspTNI	GGTCTC	1 cut(s)	758
BsrDI	GCAATG	1 cut(s)	266
BsrFI	RCCGGY	2 cut(s)	458, 524
BsrGI	TGTACA	1 cut(s)	71
BsrI	ACTGG	4 cut(s)	904, 916, 1008, 1331
BssAI	RCCGGY	2 cut(s)	458, 524
BssECI	CCNNGG	7 cut(s)	17, 511, 795, 879, 1344, 1418, 1554
BssMI	GATC	7 cut(s)	658, 729, 741, 1200, 1444, 1458, 1561
BssNI	GRCGYC	1 cut(s)	1214
BssT1I	CCWWGG	5 cut(s)	17, 511, 795, 879, 1554
Bst2UI	CCWGG	2 cut(s)	455, 1566
Bst4CI	ACNGT	4 cut(s)	541, 769, 775, 979
Bst6I	CTCTTC	4 cut(s)	193, 1127, 1489, 1608
BstACI	GRCGYC	1 cut(s)	1214
BstAUI	TGTACA	1 cut(s)	71
BstBAI	YACGTR	1 cut(s)	274
BstBI	TTCGAA	1 cut(s)	412
BstC8I	GCNNGC	2 cut(s)	715, 1294
BstDEI	CTNAG	5 cut(s)	79, 91, 99, 926, 1254
BstDSI	CCRYGG	2 cut(s)	511, 879
BstF5I	GGATG	5 cut(s)	86, 207, 294, 390, 889
BstFNI	CGCG	1 cut(s)	756
BstKTI	GATC	7 cut(s)	661, 732, 744, 1203, 1447, 1461, 1564
BstMAI	GTCTC	3 cut(s)	434, 758, 951
BstMBI	GATC	7 cut(s)	658, 729, 741, 1200, 1444, 1458, 1561
BstMWI	GCNNNNNNNGC	3 cut(s)	1091, 1259, 1268
BstNI	CCWGG	2 cut(s)	455, 1566
BstSCI	CCNGG	2 cut(s)	453, 1564
BstSFI	CTRYAG	1 cut(s)	484
BstUI	CGCG	1 cut(s)	756
BstV1I	GCAGC	2 cut(s)	1168, 1336
BstV2I	GAAGAC	2 cut(s)	655, 684
BstX2I	RGATCY	1 cut(s)	1444
BstYI	RGATCY	1 cut(s)	1444
Bsu15I	ATCGAT	2 cut(s)	668, 1365
BsuI	GTATCC	2 cut(s)	286, 1604
BsuRI	GGCC	3 cut(s)	345, 458, 692
BsuTUI	ATCGAT	2 cut(s)	668, 1365
BtgI	CCRYGG	2 cut(s)	511, 879
BtsCI	GGATG	5 cut(s)	86, 207, 294, 390, 889
BtsIMutI	CAGTG	1 cut(s)	568
Cac8I	GCNNGC	2 cut(s)	715, 1294
CaiI	CAGNNNCTG	1 cut(s)	98
Cfr10I	RCCGGY	2 cut(s)	458, 524
Cfr13I	GGNCC	4 cut(s)	152, 451, 690, 1341
ClaI	ATCGAT	2 cut(s)	668, 1365
CseI	GACGC	4 cut(s)	745, 1060, 1222, 1340
Csp6I	GTAC	6 cut(s)	72, 235, 595, 752, 1118, 1390
CviAII	CATG	9 cut(s)	114, 281, 447, 512, 583, 644, 880, 1219, 1393
CviQI	GTAC	6 cut(s)	72, 235, 595, 752, 1118, 1390
DdeI	CTNAG	5 cut(s)	79, 91, 99, 926, 1254
DpnI	GATC	7 cut(s)	660, 731, 743, 1202, 1446, 1460, 1563
DpnII	GATC	7 cut(s)	658, 729, 741, 1200, 1444, 1458, 1561
DrdI	GACNNNNNNGTC	1 cut(s)	617
DseDI	GACNNNNNNGTC	1 cut(s)	617
Eam1104I	CTCTTC	4 cut(s)	193, 1127, 1489, 1608
EarI	CTCTTC	4 cut(s)	193, 1127, 1489, 1608
EciI	GGCGGA	2 cut(s)	720, 1257
Eco130I	CCWWGG	5 cut(s)	17, 511, 795, 879, 1554
Eco31I	GGTCTC	1 cut(s)	758
Eco47I	GGWCC	3 cut(s)	152, 451, 1341
Eco57I	CTGAAG	2 cut(s)	396, 544
Eco88I	CYCGRG	1 cut(s)	1417
EcoRII	CCWGG	2 cut(s)	453, 1564
EcoT14I	CCWWGG	5 cut(s)	17, 511, 795, 879, 1554
ErhI	CCWWGG	5 cut(s)	17, 511, 795, 879, 1554
FaeI	CATG	9 cut(s)	117, 284, 450, 515, 586, 647, 883, 1222, 1396
FalI	AAGNNNNNCTT	6 cut(s)	282, 314, 302, 334, 584, 616
FaqI	GGGAC	4 cut(s)	365, 743, 1093, 1343
FatI	CATG	9 cut(s)	113, 280, 446, 511, 582, 643, 879, 1218, 1392
FauI	CCCGC	1 cut(s)	529
FblI	GTMKAC	1 cut(s)	426
Fnu4HI	GCNGC	3 cut(s)	1157, 1263, 1350
FokI	GGATG	5 cut(s)	73, 194, 281, 377, 896
Fsp4HI	GCNGC	3 cut(s)	1157, 1263, 1350
FspBI	CTAG	5 cut(s)	5, 53, 470, 1104, 1612
GluI	GCNGC	3 cut(s)	1157, 1263, 1350
GsuI	CTGGAG	1 cut(s)	933
HaeIII	GGCC	3 cut(s)	345, 458, 692
HapII	CCGG	4 cut(s)	459, 525, 699, 1088
HgaI	GACGC	4 cut(s)	745, 1060, 1222, 1340
Hin1I	GRCGYC	1 cut(s)	1214
Hin1II	CATG	9 cut(s)	117, 284, 450, 515, 586, 647, 883, 1222, 1396
HincII	GTYRAC	2 cut(s)	610, 1224
HindII	GTYRAC	2 cut(s)	610, 1224
HindIII	AAGCTT	2 cut(s)	848, 1066
HinfI	GANTC	6 cut(s)	200, 230, 922, 959, 1046, 1396
HpaII	CCGG	4 cut(s)	459, 525, 699, 1088
HphI	GGTGA	5 cut(s)	134, 253, 688, 739, 967
Hpy166II	GTNNAC	5 cut(s)	237, 427, 481, 610, 1224
Hpy188I	TCNGA	6 cut(s)	212, 1021, 1144, 1167, 1194, 1345
Hpy188III	TCNNGA	7 cut(s)	98, 656, 1060, 1088, 1104, 1303, 1448
Hpy8I	GTNNAC	5 cut(s)	237, 427, 481, 610, 1224
Hpy99I	CGWCG	1 cut(s)	1054
HpyAV	CCTTC	4 cut(s)	50, 147, 1300, 1438
HpyCH4III	ACNGT	4 cut(s)	541, 769, 775, 979
HpyCH4IV	ACGT	3 cut(s)	273, 423, 1149
HpyCH4V	TGCA	9 cut(s)	271, 286, 446, 626, 643, 1073, 1210, 1271, 1319
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1091, 1259, 1268
HpyF3I	CTNAG	5 cut(s)	79, 91, 99, 926, 1254
HpySE526I	ACGT	3 cut(s)	273, 423, 1149
Hsp92I	GRCGYC	1 cut(s)	1214
Hsp92II	CATG	9 cut(s)	117, 284, 450, 515, 586, 647, 883, 1222, 1396
Kpn2I	TCCGGA	1 cut(s)	1087
Kzo9I	GATC	7 cut(s)	658, 729, 741, 1200, 1444, 1458, 1561
LmnI	GCTCC	5 cut(s)	100, 138, 710, 1012, 1090
Lsp1109I	GCAGC	2 cut(s)	1168, 1336
LweI	GCATC	2 cut(s)	613, 1274
MaeI	CTAG	5 cut(s)	5, 53, 470, 1104, 1612
MaeII	ACGT	3 cut(s)	273, 423, 1149
MaeIII	GTNAC	3 cut(s)	578, 769, 895
MalI	GATC	7 cut(s)	660, 731, 743, 1202, 1446, 1460, 1563
MboI	GATC	7 cut(s)	658, 729, 741, 1200, 1444, 1458, 1561
MflI	RGATCY	1 cut(s)	1444
MhlI	GDGCHC	1 cut(s)	307
MluCI	AATT	7 cut(s)	159, 330, 489, 1161, 1525, 1535, 1570
MluI	ACGCGT	1 cut(s)	754
MlyI	GAGTC	3 cut(s)	916, 953, 1390
MmeI	TCCRAC	2 cut(s)	529, 1122
MroI	TCCGGA	1 cut(s)	1087
MroXI	GAANNNNTTC	1 cut(s)	1382
MseI	TTAA	3 cut(s)	122, 405, 1548
MslI	CAYNNNNRTG	2 cut(s)	561, 980
MspI	CCGG	4 cut(s)	459, 525, 699, 1088
MspR9I	CCNGG	2 cut(s)	455, 1566
MvaI	CCWGG	2 cut(s)	455, 1566
MvnI	CGCG	1 cut(s)	756
MwoI	GCNNNNNNNGC	3 cut(s)	1091, 1259, 1268
NcoI	CCATGG	2 cut(s)	511, 879
NdeII	GATC	7 cut(s)	658, 729, 741, 1200, 1444, 1458, 1561
NlaIII	CATG	9 cut(s)	117, 284, 450, 515, 586, 647, 883, 1222, 1396
NlaIV	GGNNCC	4 cut(s)	15, 452, 712, 1342
NspV	TTCGAA	1 cut(s)	412
OliI	CACNNNNGTG	1 cut(s)	561
PdmI	GAANNNNTTC	1 cut(s)	1382
PfeI	GAWTC	3 cut(s)	200, 230, 1046
PflFI	GACNNNGTC	1 cut(s)	1148
PkrI	GCNGC	3 cut(s)	1158, 1264, 1351
PleI	GAGTC	3 cut(s)	916, 953, 1390
PpsI	GAGTC	3 cut(s)	916, 953, 1390
Ppu21I	YACGTR	1 cut(s)	274
PsiI	TTATAA	1 cut(s)	788
Psp6I	CCWGG	2 cut(s)	453, 1564
PspGI	CCWGG	2 cut(s)	453, 1564
PspN4I	GGNNCC	4 cut(s)	15, 452, 712, 1342
PspPI	GGNCC	4 cut(s)	152, 451, 690, 1341
PstNI	CAGNNNCTG	1 cut(s)	98
PsuI	RGATCY	1 cut(s)	1444
PsyI	GACNNNGTC	1 cut(s)	1148
RsaI	GTAC	6 cut(s)	73, 236, 596, 753, 1119, 1391
RsaNI	GTAC	6 cut(s)	72, 235, 595, 752, 1118, 1390
RseI	CAYNNNNRTG	2 cut(s)	561, 980
SaqAI	TTAA	3 cut(s)	122, 405, 1548
SatI	GCNGC	3 cut(s)	1157, 1263, 1350
Sau3AI	GATC	7 cut(s)	658, 729, 741, 1200, 1444, 1458, 1561
Sau96I	GGNCC	4 cut(s)	152, 451, 690, 1341
ScaI	AGTACT	1 cut(s)	1119
SchI	GAGTC	3 cut(s)	916, 953, 1390
ScrFI	CCNGG	2 cut(s)	455, 1566
SduI	GDGCHC	1 cut(s)	307
SfaNI	GCATC	2 cut(s)	613, 1274
SfcI	CTRYAG	1 cut(s)	484
SfuI	TTCGAA	1 cut(s)	412
SgrAI	CRCCGGYG	1 cut(s)	524
SinI	GGWCC	3 cut(s)	152, 451, 1341
SmiMI	CAYNNNNRTG	2 cut(s)	561, 980
SmlI	CTYRAG	1 cut(s)	1113
SmoI	CTYRAG	1 cut(s)	1113
Sse9I	AATT	7 cut(s)	159, 330, 489, 1161, 1525, 1535, 1570
SsiI	CCGC	9 cut(s)	264, 339, 522, 567, 705, 963, 1242, 1262, 1352
SspMI	CTAG	5 cut(s)	5, 53, 470, 1104, 1612
StyD4I	CCNGG	2 cut(s)	453, 1564
StyI	CCWWGG	5 cut(s)	17, 511, 795, 879, 1554
TaaI	ACNGT	4 cut(s)	541, 769, 775, 979
TaiI	ACGT	3 cut(s)	276, 426, 1152
TaqII	GACCGA	1 cut(s)	140
TasI	AATT	7 cut(s)	159, 330, 489, 1161, 1525, 1535, 1570
TatI	WGTACW	3 cut(s)	71, 1117, 1389
TauI	GCSGC	1 cut(s)	1265
TfiI	GAWTC	3 cut(s)	200, 230, 1046
Tru1I	TTAA	3 cut(s)	122, 405, 1548
Tru9I	TTAA	3 cut(s)	122, 405, 1548
TscAI	CASTG	1 cut(s)	568
TseI	GCWGC	2 cut(s)	1156, 1349
TspDTI	ATGAA	6 cut(s)	75, 102, 341, 379, 856, 998
TspGWI	ACGGA	2 cut(s)	181, 209
TspRI	CASTG	1 cut(s)	568
Tth111I	GACNNNGTC	1 cut(s)	1148
VpaK11BI	GGWCC	3 cut(s)	152, 451, 1341
XapI	RAATTY	2 cut(s)	489, 1525
XbaI	TCTAGA	1 cut(s)	1103
XcmI	CCANNNNNNNNNTGG	1 cut(s)	721
XmiI	GTMKAC	1 cut(s)	426
XmnI	GAANNNNTTC	1 cut(s)	1382
XspI	CTAG	5 cut(s)	5, 53, 470, 1104, 1612
ZrmI	AGTACT	1 cut(s)	1119

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.