Rorug05G0165100

Polycomb group protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0009336
Physical Location & Seq
Forward (+)
15284835 .. 15287878
3044 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0165100.1

Sequence Viewer

Length: 2925 bp
ATGGAAGGGATTTCATGCAACAACCTCACTGGTCATGTTGTGAAAATGGACCTCAGTAACGCATACTATTCCATTTCCTATGAGGAGTGGGAACTGTGGGATGAGGTGGCTTACAGAAGGTCTCTCTTGAGGGGTAAGATAAATCCTTCATTGCTTAGCCTGAAACATTTAAATTACCTAGATCTAAGCTGGAACGATTTTGAGCTTCCCCAATTCATCGGTCAACTTCGGAGTTTGAGGTATCTCAATCTCTCTGCATTTTCATCATACGGGGGAGTGATTCCAGAGTCTATTGGGAATTTGTCATCCTGCTTGAAAACACTTGACCTTTCTAATAATTACTTTGATGGGATTCGCATTCCTGAGTTCTTTGGTCAGCTTAAAAGTTTGCAATTTCTTGACATGTCCTATTCTTCTTTTGAAATTACCTCTAATCTTGCTAACCTATCAGACTTGATCTATCTGGACCTCGGTGGGAATTTCTGGTCAATAAAAACTTCCAAAAACTTGAATTGGTTTTCTCAACTCTCTTTCTTAAAATACCTCAATCTCCAATCGTTGGACCTTAGCAGAGCTGGAGATAGTTGGCTACTTGCTGCTAACATGCTTCCCTCACTGTTAGAGCTACATTTGTCTTTCTGCCAGATTGAACATATTCCAGTCTCATTGCCAAAGATAAACATCACATCCCTTTTGATCCTTGATATGTCACAGAATTGGATCGTATCGTCAATTCCCAGCTGGTTGTTTAACCTTACCAGCCTCAGAAAACTTGATCTAAGTGGGAATTCTTTCGGTGGTTCCATAGCTTGGGAATTGGGAAGCCTCAAAAATCTGGAAGAGCTTGATTTATCTAGTAATGGCTTCGAAGGTCAAGTTCCGAGACTCATTGGAAATTCGAGTAAGCTAAAGATCTTAAATCTTGCGAATAACAAGATTGTTGGGGGGCTTCCAGAGCTGTTGGGTGGTTGTTTAGGATGTACAAATGATAAACTAGAGTCAGTAGATTTGTCTTTGAATAGGCTAAACTGCAAATTTCCTGCTTCACTGGGGATGTTACAAAATTTGCAGTATCTTAATCTTGAGTCCAACACTGTTGGGGGCACAATTCCAGAGTCAATAGGAAACTTGTCATCCTTGAAAACTCTAAATCTCAGGTATAATCATATGAATGGGTCCGTTCCTGAAAGTCTGGGACAACTCTCTCAGCTACTTCAGTTAGATCTGTCAGAGAATTCCTGGGCAGGTAGTCTATTGGAATCCCATTTCATCAATCTCACTAGGTTAGAGTCTTTTGCAGTCAGCACAAATCAACCTATGTCCATCATTTTCAATGCGACTTGGGTTGCTCCTTTTATGCTCAACACAATTGACATTAGGAAATGTAGCGTAGATCCGTCCTTTCTTGTATGGCTTCAATCTCAAACTGAATTGTCCATCGTTACCCTTTCAAGTACAAACATCTTGGGTCCCATATCAGAGGAATGGTTCTTCAAGTTTCCCCAAATCGAGTATTTGGATTTATCTTACAATCAAATCCCTGGAAAGCTTCCATTGCTACTGAAATGTCCAAATCTAAATCATATAGATTTGAGTCATAACCAATTTGAAGGTCCATTTCCATTTTATTCTTCTAATGTCTCAATTCTCAATCTCGAAAGCAATTTACTTTCGGGGCCAATTCCCTCGAATTTGGACCAGTTGATGCCTAACTTGAGAGAACTGTATCTCTCTGAGAATAAATTGAATGGTACTATTCCAGCATCTATGTGCAACATGACAAACTTGGCAATTCTTACATTGAGGAGAAATCAATTGTCTGGAGAATTCCCTCAAGCATGGAGTCTGTGGAGCAATATACTGGTAGTAGATGTAGGATACAATAATCTCTCTGGTGATATTCCCAGCTCAATGGGTGTTCCAAGCTCTCTTGCTATATTGAAGCTGAACAACAACAACTTTGGGGGTGAACTTCCTTCTTTGATATTTGAGAATTGCACAAGATTGAAGAGTGTCGATCTTGGAAGCAACCGATTCACTGGAAGCCTACCTTCAAAGATATCATCAGAATTGTTTATCCTACGGCTACGATCCAACTTTTTCAGTGGGCATATACCCCATGAGTTGTGCCTTCTTTCCATGCTTCATGTCTTGGACCTTGGTGACAACAACTTTTCAGGGACTATTCCCAAGTGTTTGAAGGAAATGTATTCCTTGGTTGAAAGCTTTTCCAACGTCAGTTACTATGATAGTTATTTTGAGCAAATCACGTTGATGTCAAAAGGAACAGAACTGACATACAACAAGACTATTTTTTTCGTGAATATCATTGATCTTTCGTCAAACAATTTAGAAGGTGAAATCCCTGAAGAAGTAAGTAGTCTCGCTGGATTGGGTACCTTGAACTTGTCAAGGAATCATTTAAGCGGACAGATTCCCTCGAAGATTGGAAACTTGCGATGGTTGGAAACCCTTGATCTCTCACATAATCACCTCTCGGGACCGATTCCTCAAAGTTTTTCTACTTTAACCTCCTTGTCTCACTTGAATTTGTCCTACAACAACTTGGCCGGAAGAATTCCCTCGAGCACACAACTTACTACACTTGTTGATTCATCAATATACGAAGCCAATCCATTATTGTGTGGGGTTCCTCTTGCAACCAAGTGCTCGGGAGATAGCACACCTGCTGCTCTGGATGGGAAAGACGACAAAGATGAAGATGACAATGAAAAGCTTGTTTTCTATGGTAGCATTGTATTTGGCTTTATCATAGGCTTTTGGGGTGTTTGTGGCGCATTGCTTATCAAGAAATCATGGAGGTATGCTTACTTTCAATTCTTTGATAAAATCAAAGATCAGGTTGCATTAAGGATTGCATTGACAGTGGCTCGTTGGCATCGAAGGAGGTCTTTATTGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0006139 GO:0006325 GO:0006342 GO:0006349 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009266 GO:0009409 GO:0009628 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0009960 GO:0009987 GO:0010154 GO:0010162 GO:0010231 GO:0010431 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0017053 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0021700 GO:0022414 GO:0022611 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031519 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0043076 GO:0043078 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048316 GO:0048367 GO:0048519 GO:0048523 GO:0048580 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070734 GO:0071514 GO:0071695 GO:0071704 GO:0071840 GO:0080050 GO:0080090 GO:0090567 GO:0090568 GO:0090696 GO:0097437 GO:0099402 GO:0140110 GO:1901360 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000014 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

974

Amino Acids

108.61

Weight (kDa)

5.31

Isoelectric Point (pI)

43.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 51 - 190 2.7e-11 Leucine-rich repeat region
LRR_14 PF23598 155 - 286 8.5e-07 Leucine-rich repeat region
LRR_8 PF13855 204 - 264 1.3e-06 Leucine rich repeat
LRR_14 PF23598 296 - 483 2.4e-12 Leucine-rich repeat region
LRR_8 PF13855 372 - 412 8.6e-06 Leucine rich repeat
LRR_8 PF13855 477 - 536 9.4e-08 Leucine rich repeat
LRR_4 PF12799 501 - 535 3.7e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 776 - 874 4e-08 Leucine-rich repeat region
LRR_8 PF13855 817 - 856 5.1e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2695
Acc36I ACCTGC 2 cut(s) 1235, 2695
Acc65I GGTACC 1 cut(s) 2396
AccB1I GGYRCC 1 cut(s) 2396
AccB7I CCANNNNNTGG 2 cut(s) 559, 810
AciI CCGC 1 cut(s) 2427
AclWI GGATC 4 cut(s) 691, 728, 1388, 2085
AcoI YGGCCR 1 cut(s) 2568
AcuI CTGAAG 2 cut(s) 1199, 2388
AfaI GTAC 4 cut(s) 982, 1456, 1753, 2398
AfiI CCNNNNNNNGG 2 cut(s) 559, 810
AflIII ACRYGT 1 cut(s) 402
AjnI CCWGG 2 cut(s) 1238, 1540
Alw21I GWGCWC 2 cut(s) 2591, 2672
Alw26I GTCTC 6 cut(s) 126, 667, 877, 1645, 2387, 2544
AlwI GGATC 4 cut(s) 691, 728, 1388, 2085
Ama87I CYCGRG 3 cut(s) 2497, 2584, 2671
AoxI GGCC 2 cut(s) 1676, 2568
ApeKI GCWGC 2 cut(s) 596, 2690
Asp700I GAANNNNTTC 2 cut(s) 654, 791
Asp718I GGTACC 1 cut(s) 2396
AspLEI GCGC 1 cut(s) 2798
AsuHPI GGTGA 5 cut(s) 1907, 1979, 2174, 2369, 2483
AsuII TTCGAA 1 cut(s) 867
AvaI CYCGRG 3 cut(s) 2497, 2584, 2671
AvaII GGWCC 9 cut(s) 49, 466, 562, 1176, 1469, 1613, 1696, 2155, 2501
BaeGI GKGCMC 1 cut(s) 1106
BanI GGYRCC 1 cut(s) 2396
Bbv12I GWGCWC 2 cut(s) 2591, 2672
BbvI GCAGC 2 cut(s) 583, 2677
BccI CCATC 5 cut(s) 341, 1331, 1445, 2454, 2693
BceAI ACGGC 1 cut(s) 2099
BciT130I CCWGG 2 cut(s) 1240, 1542
BciVI GTATCC 1 cut(s) 1871
BcoDI GTCTC 6 cut(s) 126, 667, 877, 1645, 2387, 2544
BfaI CTAG 4 cut(s) 179, 855, 995, 1281
BfuAI ACCTGC 2 cut(s) 1235, 2695
BfuI GTATCC 1 cut(s) 1871
BglII AGATCT 3 cut(s) 181, 912, 1222
BisI GCNGC 2 cut(s) 597, 2691
BlpI GCTNAGC 1 cut(s) 155
BlsI GCNGC 2 cut(s) 598, 2692
Bme1390I CCNGG 2 cut(s) 1240, 1542
Bme18I GGWCC 9 cut(s) 49, 466, 562, 1176, 1469, 1613, 1696, 2155, 2501
BmeT110I CYCGRG 3 cut(s) 2497, 2584, 2671
BmiI GGNNCC 8 cut(s) 802, 1177, 1470, 1471, 1677, 2398, 2502, 2652
BmrFI CCNGG 2 cut(s) 1240, 1542
BmrI ACTGGG 1 cut(s) 1058
BmsI GCATC 3 cut(s) 1695, 1772, 2908
BmuI ACTGGG 1 cut(s) 1058
BpmI CTGGAG 2 cut(s) 597, 1842
Bpu10I CCTNAGC 1 cut(s) 566
Bpu1102I GCTNAGC 1 cut(s) 155
Bpu14I TTCGAA 1 cut(s) 867
BpuEI CTTGAG 4 cut(s) 148, 1103, 1735, 1818
BsaBI GATNNNNATC 1 cut(s) 680
BsaI GGTCTC 1 cut(s) 126
BsaJI CCNNGG 5 cut(s) 469, 1239, 1540, 2158, 2214
Bsc4I CCNNNNNNNGG 2 cut(s) 559, 810
Bse1I ACTGG 6 cut(s) 34, 659, 1053, 1699, 1866, 2044
Bse3DI GCAATG 4 cut(s) 149, 665, 1553, 2798
Bse8I GATNNNNATC 1 cut(s) 680
BseBI CCWGG 2 cut(s) 1240, 1542
BseDI CCNNGG 5 cut(s) 469, 1239, 1540, 2158, 2214
BseGI GGATG 7 cut(s) 106, 305, 686, 983, 1059, 1133, 2704
BseJI GATNNNNATC 1 cut(s) 680
BseLI CCNNNNNNNGG 2 cut(s) 559, 810
BseMI GCAATG 4 cut(s) 149, 665, 1553, 2798
BseMII CTCAG 6 cut(s) 67, 354, 778, 1168, 1220, 1725
BseNI ACTGG 6 cut(s) 34, 659, 1053, 1699, 1866, 2044
BseRI GAGGAG 2 cut(s) 98, 1819
BseSI GKGCMC 1 cut(s) 1106
BseXI GCAGC 2 cut(s) 583, 2677
BseYI CCCAGC 2 cut(s) 737, 1904
BshFI GGCC 2 cut(s) 1678, 2570
BshNI GGYRCC 1 cut(s) 2396
BsiHKAI GWGCWC 2 cut(s) 2591, 2672
BsiHKCI CYCGRG 3 cut(s) 2497, 2584, 2671
BsiSI CCGG 1 cut(s) 2571
BslFI GGGAC 4 cut(s) 1209, 1455, 2194, 2514
BslI CCNNNNNNNGG 2 cut(s) 559, 810
BsmAI GTCTC 6 cut(s) 126, 667, 877, 1645, 2387, 2544
BsmFI GGGAC 4 cut(s) 1209, 1455, 2194, 2514
BsmI GAATGC 1 cut(s) 357
BsnI GGCC 2 cut(s) 1678, 2570
Bso31I GGTCTC 1 cut(s) 126
BsoBI CYCGRG 3 cut(s) 2497, 2584, 2671
Bsp119I TTCGAA 1 cut(s) 867
Bsp1286I GDGCHC 3 cut(s) 1106, 2591, 2672
Bsp1407I TGTACA 1 cut(s) 980
Bsp1720I GCTNAGC 1 cut(s) 155
BspACI CCGC 1 cut(s) 2427
BspANI GGCC 2 cut(s) 1678, 2570
BspCNI CTCAG 6 cut(s) 66, 355, 777, 1167, 1219, 1726
BspLI GGNNCC 8 cut(s) 802, 1177, 1470, 1471, 1677, 2398, 2502, 2652
BspMI ACCTGC 2 cut(s) 1235, 2695
BspPI GGATC 4 cut(s) 691, 728, 1388, 2085
BspQI GCTCTTC 1 cut(s) 834
BspT104I TTCGAA 1 cut(s) 867
BspT107I GGYRCC 1 cut(s) 2396
BspTNI GGTCTC 1 cut(s) 126
BsrDI GCAATG 4 cut(s) 149, 665, 1553, 2798
BsrGI TGTACA 1 cut(s) 980
BsrI ACTGG 6 cut(s) 34, 659, 1053, 1699, 1866, 2044
BssECI CCNNGG 5 cut(s) 469, 1239, 1540, 2158, 2214
BssT1I CCWWGG 2 cut(s) 2158, 2214
Bst2UI CCWGG 2 cut(s) 1240, 1542
Bst4CI ACNGT 5 cut(s) 96, 618, 1096, 1725, 2887
Bst6I CTCTTC 2 cut(s) 834, 2003
BstAUI TGTACA 1 cut(s) 980
BstBI TTCGAA 1 cut(s) 867
BstF5I GGATG 7 cut(s) 106, 305, 686, 983, 1059, 1133, 2704
BstHHI GCGC 1 cut(s) 2798
BstMAI GTCTC 6 cut(s) 126, 667, 877, 1645, 2387, 2544
BstMWI GCNNNNNNNGC 2 cut(s) 955, 1555
BstNI CCWGG 2 cut(s) 1240, 1542
BstNSI RCATGY 2 cut(s) 406, 607
BstSCI CCNGG 2 cut(s) 1238, 1540
BstSLI GKGCMC 1 cut(s) 1106
BstV1I GCAGC 2 cut(s) 583, 2677
BstX2I RGATCY 4 cut(s) 181, 912, 1222, 1393
BstXI CCANNNNNNTGG 1 cut(s) 1912
BstYI RGATCY 4 cut(s) 181, 912, 1222, 1393
BsuI GTATCC 1 cut(s) 1871
BsuRI GGCC 2 cut(s) 1678, 2570
BtgZI GCGATG 1 cut(s) 2473
BtsCI GGATG 7 cut(s) 106, 305, 686, 983, 1059, 1133, 2704
BtsIMutI CAGTG 7 cut(s) 27, 614, 1046, 1092, 2037, 2110, 2892
BveI ACCTGC 2 cut(s) 1235, 2695
CfoI GCGC 1 cut(s) 2798
Csp6I GTAC 4 cut(s) 981, 1455, 1752, 2397
CviQI GTAC 4 cut(s) 981, 1455, 1752, 2397
DraI TTTAAA 1 cut(s) 171
EaeI YGGCCR 1 cut(s) 2568
Eam1104I CTCTTC 2 cut(s) 834, 2003
EarI CTCTTC 2 cut(s) 834, 2003
Eco130I CCWWGG 2 cut(s) 2158, 2214
Eco31I GGTCTC 1 cut(s) 126
Eco32I GATATC 1 cut(s) 2061
Eco47I GGWCC 9 cut(s) 49, 466, 562, 1176, 1469, 1613, 1696, 2155, 2501
Eco57I CTGAAG 2 cut(s) 1199, 2388
Eco88I CYCGRG 3 cut(s) 2497, 2584, 2671
EcoO109I RGGNCCY 1 cut(s) 1469
EcoRI GAATTC 4 cut(s) 787, 1234, 1826, 2577
EcoRII CCWGG 2 cut(s) 1238, 1540
EcoRV GATATC 1 cut(s) 2061
EcoT14I CCWWGG 2 cut(s) 2158, 2214
ErhI CCWWGG 2 cut(s) 2158, 2214
FalI AAGNNNNNCTT 3 cut(s) 2035, 2067, 2896
FaqI GGGAC 4 cut(s) 1209, 1455, 2194, 2514
FauNDI CATATG 1 cut(s) 1167
Fnu4HI GCNGC 2 cut(s) 597, 2691
FokI GGATG 7 cut(s) 113, 292, 673, 990, 1066, 1120, 2711
Fsp4HI GCNGC 2 cut(s) 597, 2691
FspBI CTAG 4 cut(s) 179, 855, 995, 1281
GlaI GCGC 1 cut(s) 2797
GluI GCNGC 2 cut(s) 597, 2691
GsaI CCCAGC 2 cut(s) 741, 1908
GsuI CTGGAG 2 cut(s) 597, 1842
HaeIII GGCC 2 cut(s) 1678, 2570
HapII CCGG 1 cut(s) 2571
HhaI GCGC 1 cut(s) 2798
Hin6I GCGC 1 cut(s) 2796
HinP1I GCGC 1 cut(s) 2796
HincII GTYRAC 1 cut(s) 224
HindII GTYRAC 1 cut(s) 224
HindIII AAGCTT 3 cut(s) 1547, 2224, 2735
HpaII CCGG 1 cut(s) 2571
HphI GGTGA 5 cut(s) 1907, 1979, 2174, 2369, 2483
Hpy166II GTNNAC 2 cut(s) 224, 1970
Hpy188I TCNGA 8 cut(s) 231, 451, 767, 882, 1231, 1480, 1735, 2068
Hpy8I GTNNAC 2 cut(s) 224, 1970
HpyCH4III ACNGT 5 cut(s) 96, 618, 1096, 1725, 2887
HpyCH4IV ACGT 2 cut(s) 2235, 2270
HpyF10VI GCNNNNNNNGC 2 cut(s) 955, 1555
HpySE526I ACGT 2 cut(s) 2235, 2270
HspAI GCGC 1 cut(s) 2796
KflI GGGWCCC 1 cut(s) 1469
KpnI GGTACC 1 cut(s) 2400
LguI GCTCTTC 1 cut(s) 834
LmnI GCTCC 2 cut(s) 1354, 1851
Lsp1109I GCAGC 2 cut(s) 583, 2677
LweI GCATC 3 cut(s) 1695, 1772, 2908
MaeI CTAG 4 cut(s) 179, 855, 995, 1281
MaeII ACGT 2 cut(s) 2235, 2270
MaeIII GTNAC 6 cut(s) 56, 708, 1056, 1441, 2162, 2240
MboII GAAGA 9 cut(s) 405, 851, 1483, 1623, 2020, 2381, 2455, 2586, 2732
MfeI CAATTG 2 cut(s) 1368, 1814
MflI RGATCY 4 cut(s) 181, 912, 1222, 1393
MhlI GDGCHC 3 cut(s) 1106, 2591, 2672
MlyI GAGTC 8 cut(s) 296, 879, 1007, 1094, 1124, 1298, 1603, 1852
MmeI TCCRAC 5 cut(s) 540, 1113, 2118, 2256, 2445
MroXI GAANNNNTTC 2 cut(s) 654, 791
MslI CAYNNNNRTG 4 cut(s) 1170, 1768, 2273, 2641
MspA1I CMGCKG 1 cut(s) 741
MspI CCGG 1 cut(s) 2571
MspR9I CCNGG 2 cut(s) 1240, 1542
MunI CAATTG 2 cut(s) 1368, 1814
Mva1269I GAATGC 1 cut(s) 357
MvaI CCWGG 2 cut(s) 1240, 1542
MwoI GCNNNNNNNGC 2 cut(s) 955, 1555
NdeI CATATG 1 cut(s) 1167
NlaIV GGNNCC 8 cut(s) 802, 1177, 1470, 1471, 1677, 2398, 2502, 2652
NmuCI GTSAC 2 cut(s) 708, 2162
NspI RCATGY 2 cut(s) 406, 607
NspV TTCGAA 1 cut(s) 867
PaeR7I CTCGAG 1 cut(s) 2584
PaqCI CACCTGC 1 cut(s) 2695
PciI ACATGT 1 cut(s) 402
PciSI GCTCTTC 1 cut(s) 834
PcsI WCGNNNNNNNCGW 1 cut(s) 2899
PctI GAATGC 1 cut(s) 357
PdmI GAANNNNTTC 2 cut(s) 654, 791
PfeI GAWTC 8 cut(s) 280, 352, 1259, 2034, 2416, 2434, 2506, 2612
PflMI CCANNNNNTGG 2 cut(s) 559, 810
PkrI GCNGC 2 cut(s) 598, 2692
PleI GAGTC 8 cut(s) 295, 879, 1006, 1093, 1123, 1297, 1602, 1851
PpsI GAGTC 8 cut(s) 295, 879, 1006, 1093, 1123, 1297, 1602, 1851
PpuMI RGGWCCY 1 cut(s) 1469
PscI ACATGT 1 cut(s) 402
Psp5II RGGWCCY 1 cut(s) 1469
Psp6I CCWGG 2 cut(s) 1238, 1540
PspFI CCCAGC 2 cut(s) 737, 1904
PspGI CCWGG 2 cut(s) 1238, 1540
PspN4I GGNNCC 8 cut(s) 802, 1177, 1470, 1471, 1677, 2398, 2502, 2652
PspPPI RGGWCCY 1 cut(s) 1469
PspXI VCTCGAGB 1 cut(s) 2584
PsuI RGATCY 4 cut(s) 181, 912, 1222, 1393
PvuII CAGCTG 1 cut(s) 741
RsaI GTAC 4 cut(s) 982, 1456, 1753, 2398
RsaNI GTAC 4 cut(s) 981, 1455, 1752, 2397
RseI CAYNNNNRTG 4 cut(s) 1170, 1768, 2273, 2641
SapI GCTCTTC 1 cut(s) 834
SatI GCNGC 2 cut(s) 597, 2691
SchI GAGTC 8 cut(s) 296, 879, 1007, 1094, 1124, 1298, 1603, 1852
ScrFI CCNGG 2 cut(s) 1240, 1542
SduI GDGCHC 3 cut(s) 1106, 2591, 2672
SfaNI GCATC 3 cut(s) 1695, 1772, 2908
Sfr274I CTCGAG 1 cut(s) 2584
SfuI TTCGAA 1 cut(s) 867
SinI GGWCC 9 cut(s) 49, 466, 562, 1176, 1469, 1613, 1696, 2155, 2501
SlaI CTCGAG 1 cut(s) 2584
SmiI ATTTAAAT 1 cut(s) 171
SmiMI CAYNNNNRTG 4 cut(s) 1170, 1768, 2273, 2641
SmlI CTYRAG 5 cut(s) 127, 1082, 1714, 1833, 2584
SmoI CTYRAG 5 cut(s) 127, 1082, 1714, 1833, 2584
SsiI CCGC 1 cut(s) 2427
SspMI CTAG 4 cut(s) 179, 855, 995, 1281
StyD4I CCNGG 2 cut(s) 1238, 1540
StyI CCWWGG 2 cut(s) 2158, 2214
SwaI ATTTAAAT 1 cut(s) 171
TaaI ACNGT 5 cut(s) 96, 618, 1096, 1725, 2887
TaiI ACGT 2 cut(s) 2238, 2273
TaqI TCGA 9 cut(s) 867, 899, 1509, 1656, 1688, 2016, 2441, 2585, 2902
TaqII GACCGA 2 cut(s) 209, 2518
TatI WGTACW 2 cut(s) 980, 1454
TfiI GAWTC 8 cut(s) 280, 352, 1259, 2034, 2416, 2434, 2506, 2612
TscAI CASTG 7 cut(s) 34, 621, 1053, 1099, 2044, 2110, 2892
TseFI GTSAC 2 cut(s) 708, 2162
TseI GCWGC 2 cut(s) 596, 2690
Tsp45I GTSAC 2 cut(s) 708, 2162
TspDTI ATGAA 9 cut(s) 138, 205, 252, 1184, 1258, 2135, 2604, 2733, 2745
TspGWI ACGGA 2 cut(s) 1168, 1386
TspRI CASTG 7 cut(s) 34, 621, 1053, 1099, 2044, 2110, 2892
Van91I CCANNNNNTGG 2 cut(s) 559, 810
VpaK11BI GGWCC 9 cut(s) 49, 466, 562, 1176, 1469, 1613, 1696, 2155, 2501
XceI RCATGY 2 cut(s) 406, 607
XhoI CTCGAG 1 cut(s) 2584
XmnI GAANNNNTTC 2 cut(s) 654, 791
XspI CTAG 4 cut(s) 179, 855, 995, 1281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.