CRS2-associated factor 2
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G54890 |
| fragaria_vesca | FvH4_3g22500 FvH4_3g22500 FvH4_3g22500 FvH4_3g22500 FvH4_3g22500 FvH4_3g22500 |
| malus_domestica | MD03G1204000.v1.1 |
| prunus_persica | Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 Prupe.4G211400_v2.0.a1 |
| pyrus_communis | pycom11g19480 |
| rosa_chinensis | RchiOBHm_Chr5g0039151 |
| rosa_laevigata | RLG00000033898 |
| rosa_multiflora | Rmu_sc0000533.1_g000007 Rmu_ssc0000410.1_g000045 |
| rosa_roxburghii | Rroxscaffold_1G00040420 |
| rosa_rugosa | Rorug05G0177100 |
| rosa_samantha | Rh5AG263500 Rh5BG268400 Rh5CG301200 Rh5DG276200 |
| rosa_wichuraiana | Rw5G024640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 736 |
| AccB1I | GGYRCC | 2 cut(s) | 141, 759 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 717, 797 |
| AccI | GTMKAC | 1 cut(s) | 296 |
| AccII | CGCG | 1 cut(s) | 132 |
| AciI | CCGC | 6 cut(s) | 101, 113, 120, 594, 668, 851 |
| AclWI | GGATC | 2 cut(s) | 733, 746 |
| AcoI | YGGCCR | 3 cut(s) | 302, 435, 879 |
| AcsI | RAATTY | 4 cut(s) | 72, 530, 837, 1006 |
| AcuI | CTGAAG | 3 cut(s) | 144, 915, 981 |
| AcvI | CACGTG | 2 cut(s) | 366, 479 |
| AcyI | GRCGYC | 2 cut(s) | 142, 733 |
| AfaI | GTAC | 2 cut(s) | 185, 929 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 444, 717, 797 |
| AflIII | ACRYGT | 3 cut(s) | 363, 365, 476 |
| AgsI | TTSAA | 3 cut(s) | 502, 510, 842 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 847, 879 |
| AluBI | AGCT | 7 cut(s) | 391, 404, 701, 773, 965, 1133, 1145 |
| AluI | AGCT | 7 cut(s) | 391, 404, 701, 773, 965, 1133, 1145 |
| Alw21I | GWGCWC | 1 cut(s) | 1126 |
| Alw26I | GTCTC | 2 cut(s) | 239, 374 |
| Alw44I | GTGCAC | 1 cut(s) | 1122 |
| AlwI | GGATC | 2 cut(s) | 733, 746 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 930 |
| Ama87I | CYCGRG | 1 cut(s) | 242 |
| AoxI | GGCC | 5 cut(s) | 302, 435, 632, 719, 879 |
| ApaLI | GTGCAC | 1 cut(s) | 1122 |
| ApeKI | GCWGC | 5 cut(s) | 693, 956, 1133, 1158, 1202 |
| ApoI | RAATTY | 4 cut(s) | 72, 530, 837, 1006 |
| AspLEI | GCGC | 4 cut(s) | 134, 144, 204, 221 |
| AspS9I | GGNCC | 2 cut(s) | 208, 1080 |
| AsuC2I | CCSGG | 1 cut(s) | 301 |
| AsuHPI | GGTGA | 2 cut(s) | 99, 814 |
| AsuNHI | GCTAGC | 1 cut(s) | 658 |
| AvaI | CYCGRG | 1 cut(s) | 242 |
| AvaII | GGWCC | 2 cut(s) | 208, 1080 |
| BaeGI | GKGCMC | 2 cut(s) | 762, 1126 |
| BalI | TGGCCA | 2 cut(s) | 437, 881 |
| BamHI | GGATCC | 1 cut(s) | 738 |
| BanI | GGYRCC | 2 cut(s) | 141, 759 |
| BbrPI | CACGTG | 2 cut(s) | 366, 479 |
| BbsI | GAAGAC | 3 cut(s) | 509, 907, 1019 |
| Bbv12I | GWGCWC | 1 cut(s) | 1126 |
| BbvI | GCAGC | 5 cut(s) | 680, 943, 1120, 1170, 1214 |
| BccI | CCATC | 4 cut(s) | 499, 826, 902, 1071 |
| BceAI | ACGGC | 1 cut(s) | 179 |
| BcnI | CCSGG | 1 cut(s) | 301 |
| BcoDI | GTCTC | 2 cut(s) | 239, 374 |
| BfaI | CTAG | 2 cut(s) | 212, 659 |
| BfmI | CTRYAG | 1 cut(s) | 1134 |
| BfoI | RGCGCY | 2 cut(s) | 145, 222 |
| BisI | GCNGC | 5 cut(s) | 694, 957, 1134, 1159, 1203 |
| BlpI | GCTNAGC | 1 cut(s) | 697 |
| BlsI | GCNGC | 5 cut(s) | 695, 958, 1135, 1160, 1204 |
| Bme1390I | CCNGG | 1 cut(s) | 301 |
| Bme18I | GGWCC | 2 cut(s) | 208, 1080 |
| BmeT110I | CYCGRG | 1 cut(s) | 242 |
| BmgT120I | GGNCC | 2 cut(s) | 208, 1080 |
| BmiI | GGNNCC | 4 cut(s) | 143, 740, 761, 1082 |
| BmrFI | CCNGG | 1 cut(s) | 301 |
| BmrI | ACTGGG | 1 cut(s) | 254 |
| BmsI | GCATC | 2 cut(s) | 533, 1029 |
| BmtI | GCTAGC | 1 cut(s) | 662 |
| BmuI | ACTGGG | 1 cut(s) | 254 |
| BoxI | GACNNNNGTC | 1 cut(s) | 366 |
| BpiI | GAAGAC | 3 cut(s) | 509, 907, 1019 |
| BpmI | CTGGAG | 1 cut(s) | 694 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 697 |
| BpuEI | CTTGAG | 3 cut(s) | 121, 401, 600 |
| BpuMI | CCSGG | 1 cut(s) | 301 |
| BsaAI | YACGTR | 2 cut(s) | 366, 479 |
| BsaBI | GATNNNNATC | 1 cut(s) | 743 |
| BsaHI | GRCGYC | 2 cut(s) | 142, 733 |
| BsaI | GGTCTC | 1 cut(s) | 239 |
| BsaJI | CCNNGG | 1 cut(s) | 682 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 444, 717, 797 |
| Bse118I | RCCGGY | 2 cut(s) | 215, 286 |
| Bse1I | ACTGG | 3 cut(s) | 260, 711, 882 |
| Bse3DI | GCAATG | 2 cut(s) | 951, 1203 |
| Bse8I | GATNNNNATC | 1 cut(s) | 743 |
| BseDI | CCNNGG | 1 cut(s) | 682 |
| BseGI | GGATG | 2 cut(s) | 744, 874 |
| BseJI | GATNNNNATC | 1 cut(s) | 743 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 444, 717, 797 |
| BseMI | GCAATG | 2 cut(s) | 951, 1203 |
| BseMII | CTCAG | 3 cut(s) | 282, 872, 1047 |
| BseNI | ACTGG | 3 cut(s) | 260, 711, 882 |
| BseRI | GAGGAG | 1 cut(s) | 6 |
| BseSI | GKGCMC | 2 cut(s) | 762, 1126 |
| BseX3I | CGGCCG | 1 cut(s) | 302 |
| BseXI | GCAGC | 5 cut(s) | 680, 943, 1120, 1170, 1214 |
| BseYI | CCCAGC | 1 cut(s) | 249 |
| BsgI | GTGCAG | 1 cut(s) | 848 |
| Bsh1236I | CGCG | 1 cut(s) | 132 |
| Bsh1285I | CGRYCG | 1 cut(s) | 305 |
| BshFI | GGCC | 5 cut(s) | 304, 437, 634, 721, 881 |
| BshNI | GGYRCC | 2 cut(s) | 141, 759 |
| BsiEI | CGRYCG | 1 cut(s) | 305 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1126 |
| BsiHKCI | CYCGRG | 1 cut(s) | 242 |
| BsiSI | CCGG | 3 cut(s) | 216, 287, 301 |
| BslFI | GGGAC | 3 cut(s) | 137, 223, 1066 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 444, 717, 797 |
| BsmAI | GTCTC | 2 cut(s) | 239, 374 |
| BsmFI | GGGAC | 3 cut(s) | 137, 223, 1066 |
| BsmI | GAATGC | 1 cut(s) | 103 |
| BsnI | GGCC | 5 cut(s) | 304, 437, 634, 721, 881 |
| Bso31I | GGTCTC | 1 cut(s) | 239 |
| BsoBI | CYCGRG | 1 cut(s) | 242 |
| Bsp1286I | GDGCHC | 2 cut(s) | 762, 1126 |
| Bsp143I | GATC | 1 cut(s) | 738 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 697 |
| BspACI | CCGC | 6 cut(s) | 101, 113, 120, 594, 668, 851 |
| BspANI | GGCC | 5 cut(s) | 304, 437, 634, 721, 881 |
| BspCNI | CTCAG | 3 cut(s) | 283, 871, 1048 |
| BspFNI | CGCG | 1 cut(s) | 132 |
| BspLI | GGNNCC | 4 cut(s) | 143, 740, 761, 1082 |
| BspMAI | CTGCAG | 1 cut(s) | 1138 |
| BspOI | GCTAGC | 1 cut(s) | 662 |
| BspPI | GGATC | 2 cut(s) | 733, 746 |
| BspT107I | GGYRCC | 2 cut(s) | 141, 759 |
| BspTNI | GGTCTC | 1 cut(s) | 239 |
| BsrDI | GCAATG | 2 cut(s) | 951, 1203 |
| BsrFI | RCCGGY | 2 cut(s) | 215, 286 |
| BsrI | ACTGG | 3 cut(s) | 260, 711, 882 |
| BssAI | RCCGGY | 2 cut(s) | 215, 286 |
| BssECI | CCNNGG | 1 cut(s) | 682 |
| BssMI | GATC | 1 cut(s) | 738 |
| BssNI | GRCGYC | 2 cut(s) | 142, 733 |
| BssT1I | CCWWGG | 1 cut(s) | 682 |
| Bst4CI | ACNGT | 2 cut(s) | 151, 646 |
| Bst6I | CTCTTC | 1 cut(s) | 132 |
| BstACI | GRCGYC | 2 cut(s) | 142, 733 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 953 |
| BstBAI | YACGTR | 2 cut(s) | 366, 479 |
| BstC8I | GCNNGC | 6 cut(s) | 217, 288, 596, 660, 849, 949 |
| BstDEI | CTNAG | 4 cut(s) | 291, 697, 858, 1056 |
| BstF5I | GGATG | 2 cut(s) | 744, 874 |
| BstFNI | CGCG | 1 cut(s) | 132 |
| BstH2I | RGCGCY | 2 cut(s) | 145, 222 |
| BstHHI | GCGC | 4 cut(s) | 134, 144, 204, 221 |
| BstKTI | GATC | 1 cut(s) | 741 |
| BstMAI | GTCTC | 2 cut(s) | 239, 374 |
| BstMBI | GATC | 1 cut(s) | 738 |
| BstMCI | CGRYCG | 1 cut(s) | 305 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 581, 953, 962, 1111, 1130, 1142, 1202 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 366 |
| BstSCI | CCNGG | 1 cut(s) | 299 |
| BstSFI | CTRYAG | 1 cut(s) | 1134 |
| BstSLI | GKGCMC | 2 cut(s) | 762, 1126 |
| BstUI | CGCG | 1 cut(s) | 132 |
| BstV1I | GCAGC | 5 cut(s) | 680, 943, 1120, 1170, 1214 |
| BstV2I | GAAGAC | 3 cut(s) | 509, 907, 1019 |
| BstX2I | RGATCY | 1 cut(s) | 738 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 546 |
| BstYI | RGATCY | 1 cut(s) | 738 |
| BstZI | CGGCCG | 1 cut(s) | 302 |
| BsuRI | GGCC | 5 cut(s) | 304, 437, 634, 721, 881 |
| BtsCI | GGATG | 2 cut(s) | 744, 874 |
| BtsI | GCAGTG | 1 cut(s) | 831 |
| BtsIMutI | CAGTG | 2 cut(s) | 831, 889 |
| Cac8I | GCNNGC | 6 cut(s) | 217, 288, 596, 660, 849, 949 |
| CaiI | CAGNNNCTG | 1 cut(s) | 930 |
| CfoI | GCGC | 4 cut(s) | 134, 144, 204, 221 |
| Cfr10I | RCCGGY | 2 cut(s) | 215, 286 |
| Cfr13I | GGNCC | 2 cut(s) | 208, 1080 |
| Csp6I | GTAC | 2 cut(s) | 184, 928 |
| CviAII | CATG | 3 cut(s) | 385, 749, 934 |
| CviQI | GTAC | 2 cut(s) | 184, 928 |
| DdeI | CTNAG | 4 cut(s) | 291, 697, 858, 1056 |
| DinI | GGCGCC | 1 cut(s) | 143 |
| DpnI | GATC | 1 cut(s) | 740 |
| DpnII | GATC | 1 cut(s) | 738 |
| EaeI | YGGCCR | 3 cut(s) | 302, 435, 879 |
| EagI | CGGCCG | 1 cut(s) | 302 |
| Eam1104I | CTCTTC | 1 cut(s) | 132 |
| EarI | CTCTTC | 1 cut(s) | 132 |
| EciI | GGCGGA | 1 cut(s) | 109 |
| EclXI | CGGCCG | 1 cut(s) | 302 |
| Eco130I | CCWWGG | 1 cut(s) | 682 |
| Eco147I | AGGCCT | 1 cut(s) | 634 |
| Eco31I | GGTCTC | 1 cut(s) | 239 |
| Eco47I | GGWCC | 2 cut(s) | 208, 1080 |
| Eco52I | CGGCCG | 1 cut(s) | 302 |
| Eco57I | CTGAAG | 3 cut(s) | 144, 915, 981 |
| Eco72I | CACGTG | 2 cut(s) | 366, 479 |
| Eco88I | CYCGRG | 1 cut(s) | 242 |
| EcoO109I | RGGNCCY | 1 cut(s) | 208 |
| EcoRI | GAATTC | 1 cut(s) | 837 |
| EcoT14I | CCWWGG | 1 cut(s) | 682 |
| EgeI | GGCGCC | 1 cut(s) | 143 |
| EheI | GGCGCC | 1 cut(s) | 143 |
| ErhI | CCWWGG | 1 cut(s) | 682 |
| FaeI | CATG | 3 cut(s) | 388, 752, 937 |
| FaiI | YATR | 6 cut(s) | 386, 408, 750, 935, 975, 1116 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 888, 920 |
| FaqI | GGGAC | 3 cut(s) | 137, 223, 1066 |
| FatI | CATG | 3 cut(s) | 384, 748, 933 |
| FauI | CCCGC | 3 cut(s) | 108, 587, 844 |
| FblI | GTMKAC | 1 cut(s) | 296 |
| Fnu4HI | GCNGC | 5 cut(s) | 694, 957, 1134, 1159, 1203 |
| FokI | GGATG | 2 cut(s) | 731, 881 |
| Fsp4HI | GCNGC | 5 cut(s) | 694, 957, 1134, 1159, 1203 |
| FspBI | CTAG | 2 cut(s) | 212, 659 |
| GlaI | GCGC | 4 cut(s) | 133, 143, 203, 220 |
| GluI | GCNGC | 5 cut(s) | 694, 957, 1134, 1159, 1203 |
| GsaI | CCCAGC | 1 cut(s) | 253 |
| GsuI | CTGGAG | 1 cut(s) | 694 |
| HaeII | RGCGCY | 2 cut(s) | 145, 222 |
| HaeIII | GGCC | 5 cut(s) | 304, 437, 634, 721, 881 |
| HapII | CCGG | 3 cut(s) | 216, 287, 301 |
| HhaI | GCGC | 4 cut(s) | 134, 144, 204, 221 |
| Hin1I | GRCGYC | 2 cut(s) | 142, 733 |
| Hin1II | CATG | 3 cut(s) | 388, 752, 937 |
| Hin6I | GCGC | 4 cut(s) | 132, 142, 202, 219 |
| HinP1I | GCGC | 4 cut(s) | 132, 142, 202, 219 |
| HincII | GTYRAC | 1 cut(s) | 297 |
| HindII | GTYRAC | 1 cut(s) | 297 |
| HindIII | AAGCTT | 3 cut(s) | 389, 402, 1143 |
| HinfI | GANTC | 3 cut(s) | 293, 307, 671 |
| HpaII | CCGG | 3 cut(s) | 216, 287, 301 |
| HphI | GGTGA | 2 cut(s) | 99, 814 |
| Hpy166II | GTNNAC | 2 cut(s) | 297, 1124 |
| Hpy188I | TCNGA | 2 cut(s) | 170, 738 |
| Hpy188III | TCNNGA | 5 cut(s) | 154, 244, 311, 418, 558 |
| Hpy8I | GTNNAC | 2 cut(s) | 297, 1124 |
| Hpy99I | CGWCG | 1 cut(s) | 738 |
| HpyAV | CCTTC | 3 cut(s) | 172, 890, 1094 |
| HpyCH4III | ACNGT | 2 cut(s) | 151, 646 |
| HpyCH4IV | ACGT | 3 cut(s) | 365, 478, 733 |
| HpyCH4V | TGCA | 9 cut(s) | 235, 824, 829, 933, 947, 1036, 1090, 1124, 1136 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 581, 953, 962, 1111, 1130, 1142, 1202 |
| HpyF3I | CTNAG | 4 cut(s) | 291, 697, 858, 1056 |
| HpySE526I | ACGT | 3 cut(s) | 365, 478, 733 |
| Hsp92I | GRCGYC | 2 cut(s) | 142, 733 |
| Hsp92II | CATG | 3 cut(s) | 388, 752, 937 |
| HspAI | GCGC | 4 cut(s) | 132, 142, 202, 219 |
| KasI | GGCGCC | 1 cut(s) | 141 |
| KroI | GCCGGC | 2 cut(s) | 215, 286 |
| KroNI | GCCGGC | 2 cut(s) | 217, 288 |
| Kzo9I | GATC | 1 cut(s) | 738 |
| LmnI | GCTCC | 2 cut(s) | 16, 541 |
| Lsp1109I | GCAGC | 5 cut(s) | 680, 943, 1120, 1170, 1214 |
| LweI | GCATC | 2 cut(s) | 533, 1029 |
| MaeI | CTAG | 2 cut(s) | 212, 659 |
| MaeII | ACGT | 3 cut(s) | 365, 478, 733 |
| MaeIII | GTNAC | 2 cut(s) | 484, 884 |
| MalI | GATC | 1 cut(s) | 740 |
| MboI | GATC | 1 cut(s) | 738 |
| MboII | GAAGA | 8 cut(s) | 119, 200, 514, 599, 670, 912, 1019, 1022 |
| MfeI | CAATTG | 1 cut(s) | 816 |
| MflI | RGATCY | 1 cut(s) | 738 |
| MhlI | GDGCHC | 2 cut(s) | 762, 1126 |
| MlsI | TGGCCA | 2 cut(s) | 437, 881 |
| MluNI | TGGCCA | 2 cut(s) | 437, 881 |
| Mly113I | GGCGCC | 1 cut(s) | 142 |
| MlyI | GAGTC | 3 cut(s) | 302, 316, 665 |
| MmeI | TCCRAC | 1 cut(s) | 716 |
| Mox20I | TGGCCA | 2 cut(s) | 437, 881 |
| MroNI | GCCGGC | 2 cut(s) | 215, 286 |
| MscI | TGGCCA | 2 cut(s) | 437, 881 |
| MseI | TTAA | 3 cut(s) | 273, 1140, 1228 |
| MslI | CAYNNNNRTG | 2 cut(s) | 464, 1119 |
| Msp20I | TGGCCA | 2 cut(s) | 437, 881 |
| MspI | CCGG | 3 cut(s) | 216, 287, 301 |
| MspR9I | CCNGG | 1 cut(s) | 301 |
| MunI | CAATTG | 1 cut(s) | 816 |
| Mva1269I | GAATGC | 1 cut(s) | 103 |
| MvnI | CGCG | 1 cut(s) | 132 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 581, 953, 962, 1111, 1130, 1142, 1202 |
| NaeI | GCCGGC | 2 cut(s) | 217, 288 |
| NarI | GGCGCC | 1 cut(s) | 142 |
| NciI | CCSGG | 1 cut(s) | 301 |
| NdeII | GATC | 1 cut(s) | 738 |
| NgoMIV | GCCGGC | 2 cut(s) | 215, 286 |
| NheI | GCTAGC | 1 cut(s) | 658 |
| NlaIII | CATG | 3 cut(s) | 388, 752, 937 |
| NlaIV | GGNNCC | 4 cut(s) | 143, 740, 761, 1082 |
| NmeAIII | GCCGAG | 1 cut(s) | 330 |
| NmuCI | GTSAC | 1 cut(s) | 884 |
| PaeR7I | CTCGAG | 1 cut(s) | 242 |
| PceI | AGGCCT | 1 cut(s) | 634 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 192, 302 |
| PctI | GAATGC | 1 cut(s) | 103 |
| PdiI | GCCGGC | 2 cut(s) | 217, 288 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 717, 797 |
| PkrI | GCNGC | 5 cut(s) | 695, 958, 1135, 1160, 1204 |
| PleI | GAGTC | 3 cut(s) | 301, 315, 665 |
| PluTI | GGCGCC | 1 cut(s) | 145 |
| PmaCI | CACGTG | 2 cut(s) | 366, 479 |
| PmlI | CACGTG | 2 cut(s) | 366, 479 |
| PpsI | GAGTC | 3 cut(s) | 301, 315, 665 |
| Ppu21I | YACGTR | 2 cut(s) | 366, 479 |
| PpuMI | RGGWCCY | 1 cut(s) | 208 |
| PshAI | GACNNNNGTC | 1 cut(s) | 366 |
| Psp5II | RGGWCCY | 1 cut(s) | 208 |
| PspCI | CACGTG | 2 cut(s) | 366, 479 |
| PspFI | CCCAGC | 1 cut(s) | 249 |
| PspN4I | GGNNCC | 4 cut(s) | 143, 740, 761, 1082 |
| PspPI | GGNCC | 2 cut(s) | 208, 1080 |
| PspPPI | RGGWCCY | 1 cut(s) | 208 |
| PstI | CTGCAG | 1 cut(s) | 1138 |
| PstNI | CAGNNNCTG | 1 cut(s) | 930 |
| PsuI | RGATCY | 1 cut(s) | 738 |
| RsaI | GTAC | 2 cut(s) | 185, 929 |
| RsaNI | GTAC | 2 cut(s) | 184, 928 |
| RseI | CAYNNNNRTG | 2 cut(s) | 464, 1119 |
| SalI | GTCGAC | 1 cut(s) | 295 |
| SaqAI | TTAA | 3 cut(s) | 273, 1140, 1228 |
| SatI | GCNGC | 5 cut(s) | 694, 957, 1134, 1159, 1203 |
| Sau3AI | GATC | 1 cut(s) | 738 |
| Sau96I | GGNCC | 2 cut(s) | 208, 1080 |
| SchI | GAGTC | 3 cut(s) | 302, 316, 665 |
| ScrFI | CCNGG | 1 cut(s) | 301 |
| SduI | GDGCHC | 2 cut(s) | 762, 1126 |
| SfaNI | GCATC | 2 cut(s) | 533, 1029 |
| SfcI | CTRYAG | 1 cut(s) | 1134 |
| SfoI | GGCGCC | 1 cut(s) | 143 |
| Sfr274I | CTCGAG | 1 cut(s) | 242 |
| SinI | GGWCC | 2 cut(s) | 208, 1080 |
| SlaI | CTCGAG | 1 cut(s) | 242 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 464, 1119 |
| SmlI | CTYRAG | 4 cut(s) | 136, 242, 416, 615 |
| SmoI | CTYRAG | 4 cut(s) | 136, 242, 416, 615 |
| SseBI | AGGCCT | 1 cut(s) | 634 |
| SsiI | CCGC | 6 cut(s) | 101, 113, 120, 594, 668, 851 |
| SspDI | GGCGCC | 1 cut(s) | 141 |
| SspI | AATATT | 1 cut(s) | 651 |
| SspMI | CTAG | 2 cut(s) | 212, 659 |
| StuI | AGGCCT | 1 cut(s) | 634 |
| StyD4I | CCNGG | 1 cut(s) | 299 |
| StyI | CCWWGG | 1 cut(s) | 682 |
| TaaI | ACNGT | 2 cut(s) | 151, 646 |
| TaiI | ACGT | 3 cut(s) | 368, 481, 736 |
| TaqI | TCGA | 3 cut(s) | 243, 296, 527 |
| Tru1I | TTAA | 3 cut(s) | 273, 1140, 1228 |
| Tru9I | TTAA | 3 cut(s) | 273, 1140, 1228 |
| TscAI | CASTG | 2 cut(s) | 831, 889 |
| TseFI | GTSAC | 1 cut(s) | 884 |
| TseI | GCWGC | 5 cut(s) | 693, 956, 1133, 1158, 1202 |
| Tsp45I | GTSAC | 1 cut(s) | 884 |
| TspDTI | ATGAA | 3 cut(s) | 401, 765, 1017 |
| TspRI | CASTG | 2 cut(s) | 831, 889 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 717, 797 |
| VneI | GTGCAC | 1 cut(s) | 1122 |
| VpaK11BI | GGWCC | 2 cut(s) | 208, 1080 |
| XapI | RAATTY | 4 cut(s) | 72, 530, 837, 1006 |
| XhoI | CTCGAG | 1 cut(s) | 242 |
| XmiI | GTMKAC | 1 cut(s) | 296 |
| XspI | CTAG | 2 cut(s) | 212, 659 |
| ZraI | GACGTC | 1 cut(s) | 734 |