Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0008735

Physical Location & Seq

Genomic Coordinates Forward (+)

26422732 .. 26427310

Gene Structure 4579 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0245500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGTGGGCCTTATCCTGCGCCACGTCTGCTTATCCTGCGCTCACTTTCAGAGCTTCTGTACCCATGGCCACTACTCGTTCCGGCTCTCCCGTCTCCGTCTCAGTCCCTACCAATCACCATTGTTATCAGAAAGACAGTCCTTTTGTTCCAGAGGTTGTGGAAGCAGTGGATGCCCTGCATTCAGAGTTCAGAGCTGTGGATAATTTGGTAGCACGCAATACCACCCGGGTTCTTAAAGCTTTCCAGAATGCCCGAATTGGATCTCATCACTTTGCTGGAAGTACTGGCTATGGTCATGATGAAGCTGGGGGACGTGAAGCTCTTGACCAAGCTTTTGCAGAAATTGTAGGCGCTGAATCTGCAATAGTTCGCTCACAGTTTTTCTCAGGAACTCATGCTATAACCTGTGCTCTGTTTGCTTTTCTAAGGCCAGGAGATGAGCTTTTGGCAGTTGCTGGTCCTCCCTATGATACCTTAGAGGAAGTTATTGGAAAGAGAGACTCTCGTGGCATGGGATCCTTGATAGACTTTGGAGTGAAATACCGTGAAGTTCCACTTGCTGAAGATGGTGGCCTTGACTGGGATGCGCTTAGGCATGCTTTGAACCCTGAAACAAAATGTGCACTCATTCAGCGGTCATGTGGTTATTCATGGCGTCAGAGTTTAAGTGTGGATGATATAAGGCGAGCAATTGAGATAATTAAGATGCAGAATCCTAACTGCCTGGTCATGGTGGATAACTGTTATGGTGAATTTGTGGAAAGCATTGAACCTCCGATGGTGGGTGCAGATTTAATTGCTGGCAGTTTGATAAAAAATCCTGGTGGAACTATAGCCCCATGTGGTGGATATGTTGCAGGAAGAGAAAGATGGGTAAAAGCAGCAGCAGCTCGTCTGTCTGCACCTGGCCTTGGAGTTGATTGTGGCTCAACTCCTGGTCACACTATGAGAGCGTTTTTCCAAGGTTTGTTCCTTTCACCTCAAATGGTTGGCGAGGCTATCAAGGGGACTTTCCTAGTAGCTGAAGTTATGGCTTCCAAAGGGTATAAGGTCCAGCCCCTTCCTCGTGTTCCTCGCCATGACACAGTACAGGCCATACAGCTTGGAAATCGTGAGCGTCTTCTTGCTTTCTGTGAGGCTGTGCAGAGGAGCTCCCCAGTCGGTTCATTTACTAAACCAATTGCTGGCACAACTCCTGGATATGCATCAGAGGTGATATTTGCTGATGGAACATTTGTTGATGGGAGTACAAGTGAGCTTTCATGCGATGGACCATTAAGAGAGCCATTCGCTGTATTTTGCCAGGGTGGCTCCCATTGGACTCAGTGGGGACTAGTTCTTGGAGAGAAGTATGGTATGGCAGTCTCAAGATATGTCCTTGCCGCAATTGCTCAAAATACAGCAGCAGTGGCATTTCACATCATTTTTTCGAAAGAAGCTTGGAGGCTTAGTTTATTGGAAGGGAGCTACTATGTGAATCCCAGGAGACAAATCAGGATACTGCTTCAAGGGGCAAACCGCAAACAATTTGGTTCTCCATATGATAGAAATTCCAGTCACTTTACCTTTAAGAAAGAAAGTGTACCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009553 GO:0009555 GO:0009561 GO:0009987 GO:0010498 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044464 GO:0048229 GO:0048856 GO:0050789 GO:0050794 GO:0051603 GO:0051726 GO:0055046 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_11 zf-RING_2

Protein Analysis

529

Amino Acids

57.29

Weight (kDa)

7.18

Isoelectric Point (pI)

37.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Met_gamma_lyase	PF06838	54 - 445	1.1e-163	Methionine gamma-lyase
Cys_Met_Meta_PP	PF01053	62 - 297	5.2e-09	Cys/Met metabolism PLP-dependent enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008735)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22000 AT5G22000 AT5G22000 AT5G22000
fragaria_vesca	FvH4_3g26760 FvH4_3g26760
malus_domestica	MD03G1160200.v1.1 MD11G1176400.v1.1
prunus_persica	Prupe.6G148500_v2.0.a1 Prupe.6G148500_v2.0.a1 Prupe.6G148500_v2.0.a1
pyrus_communis	pycom03g11270 pycom11g15060
rosa_chinensis	RchiOBHm_Chr5g0049191
rosa_laevigata	RLG00000034598
rosa_multiflora	Rmu_sc0001440.1_g000001
rosa_roxburghii	Rroxscaffold_1G00032540
rosa_rugosa	Rorug05G0245500 Rorug05G0245600.1
rosa_samantha	Rh5AG323500 Rh5BG333900 Rh5DG345600
rosa_wichuraiana	Rw5G030550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	845, 1184
AciI	CCGC	3 cut(s)	634, 1383, 1519
AclWI	GGATC	3 cut(s)	268, 510, 523
AcoI	YGGCCR	1 cut(s)	66
AcsI	RAATTY	2 cut(s)	752, 1549
AcuI	CTGAAG	2 cut(s)	582, 1044
AcyI	GRCGYC	1 cut(s)	655
AfaI	GTAC	5 cut(s)	60, 283, 1089, 1249, 1584
AfiI	CCNNNNNNNGG	6 cut(s)	580, 730, 782, 845, 911, 1184
AgsI	TTSAA	3 cut(s)	604, 770, 1508
AhlI	ACTAGT	1 cut(s)	1333
AjiI	CACGTC	2 cut(s)	24, 314
AjnI	CCWGG	8 cut(s)	430, 723, 820, 904, 934, 1195, 1302, 1481
Alw21I	GWGCWC	3 cut(s)	412, 625, 1154
Alw26I	GTCTC	5 cut(s)	97, 103, 492, 1369, 1480
Alw44I	GTGCAC	1 cut(s)	621
AlwI	GGATC	3 cut(s)	268, 510, 523
AlwNI	CAGNNNCTG	1 cut(s)	455
Ama87I	CYCGRG	1 cut(s)	225
AoxI	GGCC	6 cut(s)	6, 66, 428, 571, 907, 1092
ApaLI	GTGCAC	1 cut(s)	621
ApeKI	GCWGC	4 cut(s)	881, 884, 887, 1403
ApoI	RAATTY	2 cut(s)	752, 1549
ArsI	GACNNNNNNTTYG	4 cut(s)	125, 157, 317, 349
AspLEI	GCGC	4 cut(s)	20, 40, 353, 589
AspS9I	GGNCC	4 cut(s)	6, 458, 1051, 1271
AsuC2I	CCSGG	2 cut(s)	226, 227
AsuHPI	GGTGA	4 cut(s)	107, 761, 969, 1225
AsuII	TTCGAA	1 cut(s)	1430
AvaI	CYCGRG	1 cut(s)	225
AvaII	GGWCC	3 cut(s)	458, 1051, 1271
BaeGI	GKGCMC	1 cut(s)	625
BalI	TGGCCA	1 cut(s)	68
BamHI	GGATCC	1 cut(s)	515
BanII	GRGCYC	1 cut(s)	1154
BauI	CACGAG	2 cut(s)	504, 1065
BbsI	GAAGAC	1 cut(s)	1112
Bbv12I	GWGCWC	3 cut(s)	412, 625, 1154
BbvI	GCAGC	4 cut(s)	893, 896, 899, 1415
BccI	CCATC	6 cut(s)	560, 772, 864, 1220, 1235, 1262
BciT130I	CCWGG	8 cut(s)	432, 725, 822, 906, 936, 1197, 1304, 1483
BciVI	GTATCC	1 cut(s)	1491
BcnI	CCSGG	2 cut(s)	226, 227
BcoDI	GTCTC	5 cut(s)	97, 103, 492, 1369, 1480
BcuI	ACTAGT	1 cut(s)	1333
BfaI	CTAG	2 cut(s)	1016, 1334
BfmI	CTRYAG	1 cut(s)	831
BfoI	RGCGCY	1 cut(s)	354
BfuI	GTATCC	1 cut(s)	1491
BglI	GCCNNNNNGGC	1 cut(s)	1308
BisI	GCNGC	5 cut(s)	882, 885, 888, 1383, 1404
BlsI	GCNGC	5 cut(s)	883, 886, 889, 1384, 1405
BmcAI	AGTACT	1 cut(s)	283
Bme18I	GGWCC	3 cut(s)	458, 1051, 1271
BmeT110I	CYCGRG	1 cut(s)	225
BmgBI	CACGTC	2 cut(s)	24, 314
BmgT120I	GGNCC	4 cut(s)	6, 458, 1051, 1271
BmiI	GGNNCC	2 cut(s)	517, 1312
BmrI	ACTGGG	2 cut(s)	589, 1151
BmsI	GCATC	4 cut(s)	160, 574, 696, 1214
BmuI	ACTGGG	2 cut(s)	589, 1151
BpiI	GAAGAC	1 cut(s)	1112
BplI	GAGNNNNNCTC	2 cut(s)	487, 519
Bpu10I	CCTNAGC	1 cut(s)	590
Bpu14I	TTCGAA	1 cut(s)	1430
BpuEI	CTTGAG	1 cut(s)	1351
BpuMI	CCSGG	2 cut(s)	226, 227
BsaBI	GATNNNNATC	1 cut(s)	1204
BsaHI	GRCGYC	1 cut(s)	655
BsaJI	CCNNGG	6 cut(s)	63, 225, 910, 961, 1303, 1481
BsaXI	ACNNNNNCTCC	4 cut(s)	1237, 1267, 1435, 1465
Bsc4I	CCNNNNNNNGG	6 cut(s)	580, 730, 782, 845, 911, 1184
Bse1I	ACTGG	4 cut(s)	289, 584, 1157, 1554
Bse8I	GATNNNNATC	1 cut(s)	1204
BseBI	CCWGG	8 cut(s)	432, 725, 822, 906, 936, 1197, 1304, 1483
BseDI	CCNNGG	6 cut(s)	63, 225, 910, 961, 1303, 1481
BseGI	GGATG	3 cut(s)	175, 589, 679
BseJI	GATNNNNATC	1 cut(s)	1204
BseLI	CCNNNNNNNGG	6 cut(s)	580, 730, 782, 845, 911, 1184
BseMII	CTCAG	3 cut(s)	114, 399, 1337
BseNI	ACTGG	4 cut(s)	289, 584, 1157, 1554
BseRI	GAGGAG	1 cut(s)	1162
BseSI	GKGCMC	1 cut(s)	625
BseXI	GCAGC	4 cut(s)	893, 896, 899, 1415
BseYI	CCCAGC	1 cut(s)	305
BsgI	GTGCAG	3 cut(s)	807, 885, 1163
BshFI	GGCC	6 cut(s)	8, 68, 430, 573, 909, 1094
BsiHKAI	GWGCWC	3 cut(s)	412, 625, 1154
BsiHKCI	CYCGRG	1 cut(s)	225
BsiSI	CCGG	2 cut(s)	81, 226
BslFI	GGGAC	4 cut(s)	89, 324, 1021, 1344
BslI	CCNNNNNNNGG	6 cut(s)	580, 730, 782, 845, 911, 1184
BsmAI	GTCTC	5 cut(s)	97, 103, 492, 1369, 1480
BsmBI	CGTCTC	2 cut(s)	97, 103
BsmFI	GGGAC	4 cut(s)	89, 324, 1021, 1344
BsmI	GAATGC	2 cut(s)	178, 253
BsnI	GGCC	6 cut(s)	8, 68, 430, 573, 909, 1094
BsoBI	CYCGRG	1 cut(s)	225
Bsp119I	TTCGAA	1 cut(s)	1430
Bsp1286I	GDGCHC	3 cut(s)	412, 625, 1154
Bsp143I	GATC	2 cut(s)	260, 515
Bsp19I	CCATGG	1 cut(s)	63
BspACI	CCGC	3 cut(s)	634, 1383, 1519
BspANI	GGCC	6 cut(s)	8, 68, 430, 573, 909, 1094
BspCNI	CTCAG	3 cut(s)	113, 398, 1336
BspHI	TCATGA	1 cut(s)	295
BspLI	GGNNCC	2 cut(s)	517, 1312
BspPI	GGATC	3 cut(s)	268, 510, 523
BspT104I	TTCGAA	1 cut(s)	1430
BsrI	ACTGG	4 cut(s)	289, 584, 1157, 1554
BssECI	CCNNGG	6 cut(s)	63, 225, 910, 961, 1303, 1481
BssMI	GATC	2 cut(s)	260, 515
BssNI	GRCGYC	1 cut(s)	655
BssSI	CACGAG	2 cut(s)	504, 1065
BssT1I	CCWWGG	3 cut(s)	63, 910, 961
Bst2BI	CACGAG	2 cut(s)	504, 1065
Bst2UI	CCWGG	8 cut(s)	432, 725, 822, 906, 936, 1197, 1304, 1483
Bst4CI	ACNGT	5 cut(s)	137, 378, 545, 743, 1087
Bst6I	CTCTTC	1 cut(s)	856
BstACI	GRCGYC	1 cut(s)	655
BstAPI	GCANNNNNTGC	1 cut(s)	170
BstBI	TTCGAA	1 cut(s)	1430
BstC8I	GCNNGC	5 cut(s)	214, 597, 687, 802, 1186
BstDEI	CTNAG	8 cut(s)	100, 385, 425, 475, 590, 1323, 1448, 1587
BstDSI	CCRYGG	1 cut(s)	63
BstF5I	GGATG	3 cut(s)	175, 589, 679
BstH2I	RGCGCY	1 cut(s)	354
BstHHI	GCGC	4 cut(s)	20, 40, 353, 589
BstKTI	GATC	2 cut(s)	263, 518
BstMAI	GTCTC	5 cut(s)	97, 103, 492, 1369, 1480
BstMBI	GATC	2 cut(s)	260, 515
BstMWI	GCNNNNNNNGC	9 cut(s)	26, 35, 170, 359, 416, 887, 1308, 1388, 1409
BstNI	CCWGG	8 cut(s)	432, 725, 822, 906, 936, 1197, 1304, 1483
BstNSI	RCATGY	1 cut(s)	599
BstSFI	CTRYAG	1 cut(s)	831
BstSLI	GKGCMC	1 cut(s)	625
BstV1I	GCAGC	4 cut(s)	893, 896, 899, 1415
BstV2I	GAAGAC	1 cut(s)	1112
BstX2I	RGATCY	2 cut(s)	260, 515
BstYI	RGATCY	2 cut(s)	260, 515
BsuI	GTATCC	1 cut(s)	1491
BsuRI	GGCC	6 cut(s)	8, 68, 430, 573, 909, 1094
BtgI	CCRYGG	1 cut(s)	63
BtgZI	GCGATG	1 cut(s)	1281
BtrI	CACGTC	2 cut(s)	24, 314
BtsCI	GGATG	3 cut(s)	175, 589, 679
BtsI	GCAGTG	2 cut(s)	171, 1413
BtsIMutI	CAGTG	3 cut(s)	171, 1331, 1413
Cac8I	GCNNGC	5 cut(s)	214, 597, 687, 802, 1186
CaiI	CAGNNNCTG	1 cut(s)	455
CciI	TCATGA	1 cut(s)	295
CfoI	GCGC	4 cut(s)	20, 40, 353, 589
Cfr13I	GGNCC	4 cut(s)	6, 458, 1051, 1271
Cfr9I	CCCGGG	1 cut(s)	225
CseI	GACGC	2 cut(s)	644, 1106
Csp6I	GTAC	5 cut(s)	59, 282, 1088, 1248, 1583
CviQI	GTAC	5 cut(s)	59, 282, 1088, 1248, 1583
DdeI	CTNAG	8 cut(s)	100, 385, 425, 475, 590, 1323, 1448, 1587
DpnI	GATC	2 cut(s)	262, 517
DpnII	GATC	2 cut(s)	260, 515
EaeI	YGGCCR	1 cut(s)	66
Eam1104I	CTCTTC	1 cut(s)	856
EarI	CTCTTC	1 cut(s)	856
Ecl136II	GAGCTC	1 cut(s)	1152
Eco130I	CCWWGG	3 cut(s)	63, 910, 961
Eco24I	GRGCYC	1 cut(s)	1154
Eco47I	GGWCC	3 cut(s)	458, 1051, 1271
Eco53kI	GAGCTC	1 cut(s)	1152
Eco57I	CTGAAG	2 cut(s)	582, 1044
Eco88I	CYCGRG	1 cut(s)	225
EcoICRI	GAGCTC	1 cut(s)	1152
EcoRII	CCWGG	8 cut(s)	430, 723, 820, 904, 934, 1195, 1302, 1481
EcoT14I	CCWWGG	3 cut(s)	63, 910, 961
EcoT22I	ATGCAT	1 cut(s)	1207
EcoT38I	GRGCYC	1 cut(s)	1154
ErhI	CCWWGG	3 cut(s)	63, 910, 961
Esp3I	CGTCTC	2 cut(s)	97, 103
FalI	AAGNNNNNCTT	3 cut(s)	540, 572, 1570
FaqI	GGGAC	4 cut(s)	89, 324, 1021, 1344
FauNDI	CATATG	1 cut(s)	1540
Fnu4HI	GCNGC	5 cut(s)	882, 885, 888, 1383, 1404
FokI	GGATG	3 cut(s)	182, 596, 686
FriOI	GRGCYC	1 cut(s)	1154
Fsp4HI	GCNGC	5 cut(s)	882, 885, 888, 1383, 1404
FspBI	CTAG	2 cut(s)	1016, 1334
GlaI	GCGC	4 cut(s)	19, 39, 352, 588
GluI	GCNGC	5 cut(s)	882, 885, 888, 1383, 1404
GsaI	CCCAGC	1 cut(s)	309
HaeII	RGCGCY	1 cut(s)	354
HaeIII	GGCC	6 cut(s)	8, 68, 430, 573, 909, 1094
HapII	CCGG	2 cut(s)	81, 226
HgaI	GACGC	2 cut(s)	644, 1106
HhaI	GCGC	4 cut(s)	20, 40, 353, 589
Hin1I	GRCGYC	1 cut(s)	655
Hin6I	GCGC	4 cut(s)	18, 38, 351, 587
HinP1I	GCGC	4 cut(s)	18, 38, 351, 587
HindIII	AAGCTT	3 cut(s)	237, 330, 1437
HinfI	GANTC	5 cut(s)	356, 500, 712, 1321, 1477
HpaII	CCGG	2 cut(s)	81, 226
HphI	GGTGA	4 cut(s)	107, 761, 969, 1225
Hpy166II	GTNNAC	2 cut(s)	623, 1583
Hpy188I	TCNGA	7 cut(s)	50, 129, 184, 191, 660, 777, 1210
Hpy188III	TCNNGA	8 cut(s)	149, 244, 296, 323, 387, 1112, 1368, 1495
Hpy8I	GTNNAC	2 cut(s)	623, 1583
HpyAV	CCTTC	2 cut(s)	1070, 1454
HpyCH4III	ACNGT	5 cut(s)	137, 378, 545, 743, 1087
HpyCH4IV	ACGT	2 cut(s)	23, 313
HpyF10VI	GCNNNNNNNGC	9 cut(s)	26, 35, 170, 359, 416, 887, 1308, 1388, 1409
HpyF3I	CTNAG	8 cut(s)	100, 385, 425, 475, 590, 1323, 1448, 1587
HpySE526I	ACGT	2 cut(s)	23, 313
Hsp92I	GRCGYC	1 cut(s)	655
HspAI	GCGC	4 cut(s)	18, 38, 351, 587
Kzo9I	GATC	2 cut(s)	260, 515
LmnI	GCTCC	4 cut(s)	1149, 1157, 1316, 1464
Lsp1109I	GCAGC	4 cut(s)	893, 896, 899, 1415
LweI	GCATC	4 cut(s)	160, 574, 696, 1214
MaeI	CTAG	2 cut(s)	1016, 1334
MaeII	ACGT	2 cut(s)	23, 313
MaeIII	GTNAC	2 cut(s)	938, 1556
MalI	GATC	2 cut(s)	262, 517
MboI	GATC	2 cut(s)	260, 515
MboII	GAAGA	3 cut(s)	575, 873, 1112
MfeI	CAATTG	3 cut(s)	690, 1179, 1386
MflI	RGATCY	2 cut(s)	260, 515
MhlI	GDGCHC	3 cut(s)	412, 625, 1154
MlsI	TGGCCA	1 cut(s)	68
MluNI	TGGCCA	1 cut(s)	68
MlyI	GAGTC	2 cut(s)	494, 1315
Mox20I	TGGCCA	1 cut(s)	68
Mph1103I	ATGCAT	1 cut(s)	1207
MscI	TGGCCA	1 cut(s)	68
MseI	TTAA	6 cut(s)	234, 665, 702, 794, 1277, 1569
Msp20I	TGGCCA	1 cut(s)	68
MspA1I	CMGCKG	1 cut(s)	634
MspI	CCGG	2 cut(s)	81, 226
MunI	CAATTG	3 cut(s)	690, 1179, 1386
Mva1269I	GAATGC	2 cut(s)	178, 253
MvaI	CCWGG	8 cut(s)	432, 725, 822, 906, 936, 1197, 1304, 1483
MwoI	GCNNNNNNNGC	9 cut(s)	26, 35, 170, 359, 416, 887, 1308, 1388, 1409
NciI	CCSGG	2 cut(s)	226, 227
NcoI	CCATGG	1 cut(s)	63
NdeI	CATATG	1 cut(s)	1540
NdeII	GATC	2 cut(s)	260, 515
NlaIV	GGNNCC	2 cut(s)	517, 1312
NmuCI	GTSAC	2 cut(s)	938, 1556
NsiI	ATGCAT	1 cut(s)	1207
NspI	RCATGY	1 cut(s)	599
NspV	TTCGAA	1 cut(s)	1430
PaeI	GCATGC	1 cut(s)	599
PagI	TCATGA	1 cut(s)	295
PctI	GAATGC	2 cut(s)	178, 253
PfeI	GAWTC	3 cut(s)	356, 712, 1477
PflMI	CCANNNNNTGG	2 cut(s)	845, 1184
PfoI	TCCNGGA	1 cut(s)	1195
PkrI	GCNGC	5 cut(s)	883, 886, 889, 1384, 1405
PleI	GAGTC	2 cut(s)	494, 1315
PpsI	GAGTC	2 cut(s)	494, 1315
Psp124BI	GAGCTC	1 cut(s)	1154
Psp6I	CCWGG	8 cut(s)	430, 723, 820, 904, 934, 1195, 1302, 1481
PspFI	CCCAGC	1 cut(s)	305
PspGI	CCWGG	8 cut(s)	430, 723, 820, 904, 934, 1195, 1302, 1481
PspN4I	GGNNCC	2 cut(s)	517, 1312
PspPI	GGNCC	4 cut(s)	6, 458, 1051, 1271
PstNI	CAGNNNCTG	1 cut(s)	455
PsuI	RGATCY	2 cut(s)	260, 515
RsaI	GTAC	5 cut(s)	60, 283, 1089, 1249, 1584
RsaNI	GTAC	5 cut(s)	59, 282, 1088, 1248, 1583
SacI	GAGCTC	1 cut(s)	1154
SaqAI	TTAA	6 cut(s)	234, 665, 702, 794, 1277, 1569
SatI	GCNGC	5 cut(s)	882, 885, 888, 1383, 1404
Sau3AI	GATC	2 cut(s)	260, 515
Sau96I	GGNCC	4 cut(s)	6, 458, 1051, 1271
ScaI	AGTACT	1 cut(s)	283
SchI	GAGTC	2 cut(s)	494, 1315
SduI	GDGCHC	3 cut(s)	412, 625, 1154
SfaNI	GCATC	4 cut(s)	160, 574, 696, 1214
SfcI	CTRYAG	1 cut(s)	831
SfuI	TTCGAA	1 cut(s)	1430
SinI	GGWCC	3 cut(s)	458, 1051, 1271
SmaI	CCCGGG	1 cut(s)	227
SmlI	CTYRAG	1 cut(s)	1366
SmoI	CTYRAG	1 cut(s)	1366
SpeI	ACTAGT	1 cut(s)	1333
SphI	GCATGC	1 cut(s)	599
SsiI	CCGC	3 cut(s)	634, 1383, 1519
SspMI	CTAG	2 cut(s)	1016, 1334
SstI	GAGCTC	1 cut(s)	1154
StyI	CCWWGG	3 cut(s)	63, 910, 961
TaaI	ACNGT	5 cut(s)	137, 378, 545, 743, 1087
TaiI	ACGT	2 cut(s)	26, 316
TaqI	TCGA	1 cut(s)	1430
TatI	WGTACW	3 cut(s)	281, 1087, 1247
TauI	GCSGC	1 cut(s)	1385
TfiI	GAWTC	3 cut(s)	356, 712, 1477
Tru1I	TTAA	6 cut(s)	234, 665, 702, 794, 1277, 1569
Tru9I	TTAA	6 cut(s)	234, 665, 702, 794, 1277, 1569
TscAI	CASTG	3 cut(s)	171, 1331, 1413
TseFI	GTSAC	2 cut(s)	938, 1556
TseI	GCWGC	4 cut(s)	881, 884, 887, 1403
Tsp45I	GTSAC	2 cut(s)	938, 1556
TspDTI	ATGAA	4 cut(s)	315, 639, 1155, 1251
TspGWI	ACGGA	1 cut(s)	85
TspMI	CCCGGG	1 cut(s)	225
TspRI	CASTG	3 cut(s)	171, 1331, 1413
Van91I	CCANNNNNTGG	2 cut(s)	845, 1184
VneI	GTGCAC	1 cut(s)	621
VpaK11BI	GGWCC	3 cut(s)	458, 1051, 1271
XapI	RAATTY	2 cut(s)	752, 1549
XceI	RCATGY	1 cut(s)	599
XmaI	CCCGGG	1 cut(s)	225
XspI	CTAG	2 cut(s)	1016, 1334
ZrmI	AGTACT	1 cut(s)	283
Zsp2I	ATGCAT	1 cut(s)	1207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.