Gene Detail - Rorug05G0440500

Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0010844

Physical Location & Seq

Genomic Coordinates Reverse (-)

61294757 .. 61294826

Gene Structure 70 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 22 bp

Sequence not available

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005488 GO:0005509 GO:0005513 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0008150 GO:0009593 GO:0009705 GO:0010035 GO:0010038 GO:0016020 GO:0031090 GO:0042221 GO:0042592 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0048878 GO:0050801 GO:0050896 GO:0051592 GO:0051606 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0065007 GO:0065008 GO:0071944 GO:0098588 GO:0098771 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04010 ko04020 ko04022 ko04114 ko04218 ko04310 ko04360 ko04370 ko04380 ko04650 ko04658 ko04659 ko04660 ko04662 ko04720 ko04724 ko04921 ko04922 ko04924 ko05010 ko05014 ko05031 ko05152 ko05166 ko05167 map04010 map04020 map04022 map04114 map04218 map04310 map04360 map04370 map04380 map04650 map04658 map04659 map04660 map04662 map04720 map04724 map04921 map04922 map04924 map05010 map05014 map05031 map05152 map05166 map05167

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_7 EF-hand_8

Genomic Context

Gene Family Tree

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010844)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26570 AT4G26570 AT5G55990 AT5G55990
fragaria_vesca	FvH4_3g42250 FvH4_3g42250 FvH4_3g42250 FvH4_3g42250
malus_domestica	MD03G1036500.v1.1
pyrus_communis	pycom03g02790
rosa_chinensis	RchiOBHm_Chr5g0075551
rosa_laevigata	RLG00000036575
rosa_multiflora	Rmu_co8417431.1_g000001 Rmu_sc0003437.1_g000004 Rmu_sc0024773.1_g000001
rosa_rugosa	Rorug05G0440300 Rorug05G0440400 Rorug05G0440500.1
rosa_samantha	Rh5AG497700
rosa_wichuraiana	Rw5G046130

Restriction Enzyme Sites

1 / 10

No common restriction sites found or sequence not available.