Rorug05G0492600

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
67513308 .. 67517371
4064 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0492600.1

Sequence Viewer

Length: 2772 bp
ATGGCTCCATCTGCAAGCACATCGAAAGTTGCTAGATCTATAGCCTTAAGGATGAAGGCGGTGCAGATGAAATGTTGTAGAAAAACCGTCTCTGAACCACCTATTACTTCTCCAAATCGTAAACCTACTACCCCCAAAAAGGCTGCAGCAAGGCTGATAGAAGCCAACAAGGCTACCTCTCCTAGGAGAAGTCCGCGAAAACATAAAGCTACTCAGTCCAGCAAGGATGTGTCCTCTAGGAGACGTATGGCACCTCCTAAAGCAGTAAATTCCAAGGTGGCTGTGGCAGCAAAGAAGTCGTCGTCCGGTCGTAAGTCTGCAAAGAGCAAGTCATCCGAGGATTCTGATGATGATGACAACATCACTGGTGGATTGAGGTTGCTTAAGAGAGGGATGGTAAGCATGAATAAAATTACTAGGCGACTGATTCGAGGAAAGAAGCTAAAGGTGAATTCTAATGCTGATGGGGAGCCAATTGGGAAGGCAGGTAAGGAGATGCAGTCATACATTGGGGTGTTAGCACTCACCAAGATCCCAATATCTATAAATGATTGGAGAAATGTGCCTTTGGATGAAAAAGACAAGATTTGGAATAGTATTCAGGATGCTTATGTGGTGCCAAAAGAATGGAAGAAATTGGTGATTACATCAGCCGGCCACAAATGGAGAGAGTGCAAGAGCAAACTAACGAACTGGTACATTATTCCCTATCTGGATTCTCCTGAACTTTTAAAGTTCCCTCCAGATGATTATCGATCCATTGAGGTAGATGAATGGAATACGTTCGTGGTTGATAGAACTTCAGAACAATTTCAGGTACTCCGTGAAAAGCAGAAAATAAAGAGGAAGGAGAATAAGTATCCTCATCGATTGTCACGGAAAGGATATGCTAACTTCCAAGAAGAATTGGCTGAAAAAATACCGATTGAAGAATTGGATCGTGCTACGATGTGGATAAAGGCCCGGCAAGACAAGAGCGGCAACTTCAAAGGGCCAGCAGTGAAGAAGAAGGTCGAAAAAATTGAAAGTTTGAAGAGGAAAGTGTCTGAAGGAGAAATCAACCCTGAAGGAACAGATGATGTTCTGACTTTGGCGTTGGGAAATCCTGAGTATCCTGGTAGGGTACGCGGTGTTGGTGGCTTCGTCAAGCCTTCCGCATATTTTCATCTACCTAAACGCCCAATGCTAAATGTAGAAGATAGTGTTAGGGTAAGTGTTAAGAAGATACTAGCAGAAGAGAAAGAAAATATCATTGCTCAGGAAAGAGCCAAATGGGAGTTGGAGATGGAGCGACAAATTGCTAGGGAAAGAGCTGCTTGGGAGGAAAGATTTCAGAAGTTAGAAGCGATGGTTAAGGGAAAAGAGATGCCAGCTGACTCACCCAAACCTGTGACACCGCTGAATGATTTAGGCTCTGGTCAGGGCAGCTGTTCAAGGCTACTTGAACAGGCTGGTTTGAAAGCTATTGAAATTCAAGCCGCCAAAACTGCCAAGAAGAAGTTAGTTTTAGGGGAGGACCAGCAGAAAGTAGTTGAAGAGAATGAAGTCTTTGTGGATGGGGAGCTGAACATCAAACTAACCTCGATTATTGAGGAGGAGGTTAGGAATGATTTAACTCCAAAAAAAAATGCAGTTGTGGAGCAAGTGCAAGTGCCGGTTCAGTCCACCAATATTGTCCAGTCAGGGTGTAAACTTGCGATAGATTCATTGGACAACATAGTGGCTGAAGGAACGATCATTCAAGTGGATGTTGAGTCCAGCAAGCAAACCATCCATGGTGTTCCATTGGTTGAGGAAAATGTCCGAGTGTCGATCACCAAATCTATTGTTGCCAATGCTTTGCTACCAATTCCTATTAAGGATGAGATTCTGTTTGTCCGCGATGCAATTGGTACATGCGTTGCTTGGCCTAGAGACTGGGTTATACCCACTGCAGCTGATGCAAAGCAACAAAAGCATAAAAATGTGAGGAGGAAAAAGAAGGATACATATGATGATTTTTTTGATCATGATGATTTGGACAAGCTGCCACCCAATTTGCCTCCACCACTTAAGACGTTGGCCACATGGGCTAATGATTACTTAAAGGATGGGATCACCATCCACACAACCTTAGGCGAGGAATTATTTGGATATCGAAAGAAGGTCGCCATCTTCAGAAGGGATGTGTATGCCATGACCAACATGGAGGAGGTTTCTGTCGGCTGCGTTGTGATGTATATGAGCTTCCTTTATCAAGTGTTGAAGAAATCGAAGATGCTTGACATGATTGGCTTCGTAGATCCTGCTAATACTGGTGTCATTGGCTGTGGAAATCCGACTGAACGGGCTCGTTCGTTGTCAGTTTCTTATGAAAGAGGGAAGCCTGGTCAGATTTTTTTGGTCCCCTATAATTCAGGCTGTCATTGGATGTTGACGGTGGCGAACCCCACTGAAGAAGTTGTGTATTTTATGGATCCGCTAAAGAGGCGACTCATCACCGGTGAATGGAGAACTATTGTGGACAACTCCATCAAAATATTCAATGCCCAAAAACATAGGAAAGGCCGAAAGACTGTTCAATGGAAAAACTGTGCAGGCATTCCGGAGCAGATGGGTGATAAGACTTGTGGATATTGGATTATGCATTACATGAGGGATATAGTAGAGGACAAAAACCAAGAGTGGAGTGCTAAGTGGGAAAGAAAAGCAAATCACTATTACACAATGGAGAATGTTGATGTTGTCCGGGCAGAGTGGGCAAAGTATGTTATGAAGTTCAGAGATAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

923

Amino Acids

104.77

Weight (kDa)

9.49

Isoelectric Point (pI)

43.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 257 - 384 3.6e-09 Plant transposase (Ptta/En/Spm family)
DUF8039 PF26133 561 - 641 2.8e-10 Domain of unknown function (DUF8039)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013921)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33440
fragaria_vesca FvH4_2g00200
malus_domestica MD05G1000900.v1.1
prunus_persica Prupe.8G001900_v2.0.a1 Prupe.8G001900_v2.0.a1
pyrus_communis pycom05g00010
rosa_chinensis RchiOBHm_Chr6g0249481
rosa_laevigata RLG00000015577
rosa_multiflora Rmu_sc0002916.1_g000002
rosa_roxburghii Rroxscaffold_7G00217660
rosa_rugosa Rorug05G0492600 Rorug05G0492700
rosa_samantha Rh6AG002400 Rh6BG007700 Rh6CG001600 Rh6DG001600
rosa_wichuraiana Rw6G000300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 476
AccB1I GGYRCC 2 cut(s) 250, 616
AccBSI CCGCTC 1 cut(s) 978
AccII CGCG 3 cut(s) 196, 1128, 1881
AccIII TCCGGA 1 cut(s) 2584
AciI CCGC 9 cut(s) 59, 194, 978, 1128, 1155, 1397, 1479, 1879, 2459
AclWI GGATC 7 cut(s) 526, 750, 945, 2102, 2276, 2450, 2463
AcoI YGGCCR 2 cut(s) 655, 2061
AcsI RAATTY 3 cut(s) 268, 451, 1470
AcuI CTGAAG 6 cut(s) 786, 1068, 1086, 1746, 2140, 2454
AfaI GTAC 4 cut(s) 698, 819, 1125, 1894
AfiI CCNNNNNNNGG 3 cut(s) 139, 183, 2487
AflII CTTAAG 3 cut(s) 46, 383, 2051
AgeI ACCGGT 1 cut(s) 2480
AjnI CCWGG 2 cut(s) 1114, 2365
Alw26I GTCTC 3 cut(s) 94, 235, 1908
AlwI GGATC 7 cut(s) 526, 750, 945, 2102, 2276, 2450, 2463
Aor13HI TCCGGA 1 cut(s) 2584
AoxI GGCC 6 cut(s) 655, 960, 992, 1907, 2061, 2545
ApeKI GCWGC 8 cut(s) 143, 146, 287, 1313, 1425, 1934, 2026, 2205
ApoI RAATTY 3 cut(s) 268, 451, 1470
ArsI GACNNNNNNTTYG 4 cut(s) 284, 314, 316, 346
AsiGI ACCGGT 1 cut(s) 2480
Asp700I GAANNNNTTC 3 cut(s) 782, 810, 1329
AspA2I CCTAGG 1 cut(s) 182
AspS9I GGNCC 4 cut(s) 961, 992, 1516, 2383
AsuC2I CCSGG 2 cut(s) 964, 2729
AsuHPI GGTGA 9 cut(s) 460, 517, 652, 1371, 1807, 2089, 2470, 2495, 2609
AvaII GGWCC 2 cut(s) 1516, 2383
AvrII CCTAGG 1 cut(s) 182
AxyI CCTNAGG 1 cut(s) 2113
BaeI ACNNNNGTAYC 2 cut(s) 1884, 1917
BalI TGGCCA 1 cut(s) 2063
BamHI GGATCC 1 cut(s) 2455
BanI GGYRCC 2 cut(s) 250, 616
BanII GRGCYC 1 cut(s) 2332
BarI GAAGNNNNNNTAC 2 cut(s) 2210, 2242
BbvI GCAGC 8 cut(s) 130, 158, 299, 1300, 1437, 1946, 2013, 2192
BcgI CGANNNNNNTGC 3 cut(s) 37, 279, 313
BciT130I CCWGG 2 cut(s) 1116, 2367
BciVI GTATCC 3 cut(s) 870, 1122, 1978
BclI TGATCA 1 cut(s) 2005
BcnI CCSGG 2 cut(s) 964, 2729
BcoDI GTCTC 3 cut(s) 94, 235, 1908
BfaI CTAG 8 cut(s) 33, 183, 237, 417, 1229, 1302, 1911, 2770
BfmI CTRYAG 3 cut(s) 39, 144, 1932
BfrI CTTAAG 3 cut(s) 46, 383, 2051
BfuAI ACCTGC 1 cut(s) 476
BfuI GTATCC 3 cut(s) 870, 1122, 1978
BglI GCCNNNNNGGC 2 cut(s) 170, 2069
BglII AGATCT 1 cut(s) 35
BlnI CCTAGG 1 cut(s) 182
Bme1390I CCNGG 4 cut(s) 964, 1116, 2367, 2729
Bme18I GGWCC 2 cut(s) 1516, 2383
BmgT120I GGNCC 4 cut(s) 961, 992, 1516, 2383
BmiI GGNNCC 6 cut(s) 6, 252, 471, 618, 2385, 2457
BmrFI CCNGG 4 cut(s) 964, 1116, 2367, 2729
BmrI ACTGGG 1 cut(s) 1927
BmsI GCATC 6 cut(s) 486, 595, 1356, 1873, 1930, 2247
BmuI ACTGGG 1 cut(s) 1927
BpmI CTGGAG 1 cut(s) 726
Bpu10I CCTNAGC 1 cut(s) 1257
BpuMI CCSGG 2 cut(s) 964, 2729
Bsa29I ATCGAT 2 cut(s) 754, 868
BsaBI GATNNNNATC 2 cut(s) 750, 2099
BsaJI CCNNGG 4 cut(s) 182, 273, 336, 1774
BsaWI WCCGGW 3 cut(s) 305, 2480, 2584
BsaXI ACNNNNNCTCC 4 cut(s) 485, 515, 842, 872
Bsc4I CCNNNNNNNGG 3 cut(s) 139, 183, 2487
Bse118I RCCGGY 3 cut(s) 653, 1654, 2480
Bse1I ACTGG 5 cut(s) 370, 698, 1678, 1922, 2299
Bse21I CCTNAGG 1 cut(s) 2113
Bse3DI GCAATG 1 cut(s) 1251
Bse8I GATNNNNATC 2 cut(s) 750, 2099
BseAI TCCGGA 1 cut(s) 2584
BseBI CCWGG 2 cut(s) 1116, 2367
BseCI ATCGAT 2 cut(s) 754, 868
BseDI CCNNGG 4 cut(s) 182, 273, 336, 1774
BseJI GATNNNNATC 2 cut(s) 750, 2099
BseLI CCNNNNNNNGG 3 cut(s) 139, 183, 2487
BseMI GCAATG 1 cut(s) 1251
BseMII CTCAG 3 cut(s) 227, 1098, 1271
BseNI ACTGG 5 cut(s) 370, 698, 1678, 1922, 2299
BseRI GAGGAG 4 cut(s) 1607, 1610, 1984, 2204
BseXI GCAGC 8 cut(s) 130, 158, 299, 1300, 1437, 1946, 2013, 2192
BsgI GTGCAG 2 cut(s) 83, 2595
Bsh1236I CGCG 3 cut(s) 196, 1128, 1881
Bsh1285I CGRYCG 1 cut(s) 310
BshFI GGCC 6 cut(s) 657, 962, 994, 1909, 2063, 2547
BshNI GGYRCC 2 cut(s) 250, 616
BshTI ACCGGT 1 cut(s) 2480
BshVI ATCGAT 2 cut(s) 754, 868
BsiEI CGRYCG 1 cut(s) 310
BsiSI CCGG 7 cut(s) 306, 654, 964, 1655, 2481, 2585, 2728
BslFI GGGAC 1 cut(s) 2369
BslI CCNNNNNNNGG 3 cut(s) 139, 183, 2487
BsmAI GTCTC 3 cut(s) 94, 235, 1908
BsmBI CGTCTC 2 cut(s) 94, 235
BsmFI GGGAC 1 cut(s) 2369
BsmI GAATGC 1 cut(s) 2580
BsnI GGCC 6 cut(s) 657, 962, 994, 1909, 2063, 2547
Bsp1286I GDGCHC 1 cut(s) 2332
Bsp13I TCCGGA 1 cut(s) 2584
Bsp19I CCATGG 1 cut(s) 1774
BspACI CCGC 9 cut(s) 59, 194, 978, 1128, 1155, 1397, 1479, 1879, 2459
BspANI GGCC 6 cut(s) 657, 962, 994, 1909, 2063, 2547
BspCNI CTCAG 3 cut(s) 226, 1099, 1270
BspDI ATCGAT 2 cut(s) 754, 868
BspEI TCCGGA 1 cut(s) 2584
BspFNI CGCG 3 cut(s) 196, 1128, 1881
BspHI TCATGA 1 cut(s) 2008
BspLI GGNNCC 6 cut(s) 6, 252, 471, 618, 2385, 2457
BspMAI CTGCAG 2 cut(s) 148, 1936
BspMI ACCTGC 1 cut(s) 476
BspPI GGATC 7 cut(s) 526, 750, 945, 2102, 2276, 2450, 2463
BspT107I GGYRCC 2 cut(s) 250, 616
BspTI CTTAAG 3 cut(s) 46, 383, 2051
BsrBI CCGCTC 1 cut(s) 978
BsrDI GCAATG 1 cut(s) 1251
BsrFI RCCGGY 3 cut(s) 653, 1654, 2480
BsrI ACTGG 5 cut(s) 370, 698, 1678, 1922, 2299
BssAI RCCGGY 3 cut(s) 653, 1654, 2480
BssECI CCNNGG 4 cut(s) 182, 273, 336, 1774
BssT1I CCWWGG 3 cut(s) 182, 273, 1774
Bst2UI CCWGG 2 cut(s) 1116, 2367
Bst4CI ACNGT 4 cut(s) 88, 2419, 2557, 2573
Bst6I CTCTTC 3 cut(s) 1028, 1230, 1530
BstAFI CTTAAG 3 cut(s) 46, 383, 2051
BstAPI GCANNNNNTGC 1 cut(s) 1940
BstC8I GCNNGC 6 cut(s) 16, 655, 996, 1371, 1763, 2578
BstDEI CTNAG 5 cut(s) 213, 1107, 1257, 2113, 2673
BstDSI CCRYGG 1 cut(s) 1774
BstENI CCTNNNNNAGG 1 cut(s) 181
BstFNI CGCG 3 cut(s) 196, 1128, 1881
BstMAI GTCTC 3 cut(s) 94, 235, 1908
BstMCI CGRYCG 1 cut(s) 310
BstMWI GCNNNNNNNGC 9 cut(s) 11, 170, 287, 1487, 1940, 1954, 2069, 2467, 2738
BstNI CCWGG 2 cut(s) 1116, 2367
BstNSI RCATGY 1 cut(s) 1899
BstSCI CCNGG 4 cut(s) 962, 1114, 2365, 2727
BstSFI CTRYAG 3 cut(s) 39, 144, 1932
BstUI CGCG 3 cut(s) 196, 1128, 1881
BstV1I GCAGC 8 cut(s) 130, 158, 299, 1300, 1437, 1946, 2013, 2192
BstX2I RGATCY 4 cut(s) 35, 531, 2281, 2455
BstXI CCANNNNNNTGG 1 cut(s) 627
BstYI RGATCY 4 cut(s) 35, 531, 2281, 2455
Bsu15I ATCGAT 2 cut(s) 754, 868
Bsu36I CCTNAGG 1 cut(s) 2113
BsuI GTATCC 3 cut(s) 870, 1122, 1978
BsuRI GGCC 6 cut(s) 657, 962, 994, 1909, 2063, 2547
BsuTUI ATCGAT 2 cut(s) 754, 868
BtgI CCRYGG 1 cut(s) 1774
BtgZI GCGATG 2 cut(s) 1361, 1896
BtsI GCAGTG 2 cut(s) 1005, 1929
BtsIMutI CAGTG 4 cut(s) 363, 1005, 1929, 2430
BveI ACCTGC 1 cut(s) 476
Cac8I GCNNGC 6 cut(s) 16, 655, 996, 1371, 1763, 2578
CciI TCATGA 1 cut(s) 2008
Cfr10I RCCGGY 3 cut(s) 653, 1654, 2480
Cfr13I GGNCC 4 cut(s) 961, 992, 1516, 2383
ClaI ATCGAT 2 cut(s) 754, 868
Csp6I GTAC 4 cut(s) 697, 818, 1124, 1893
CspAI ACCGGT 1 cut(s) 2480
CspCI CAANNNNNGTGG 4 cut(s) 1654, 1689, 2019, 2054
CviAII CATG 9 cut(s) 403, 1775, 1896, 2009, 2067, 2176, 2185, 2266, 2632
CviQI GTAC 4 cut(s) 697, 818, 1124, 1893
DdeI CTNAG 5 cut(s) 213, 1107, 1257, 2113, 2673
DraI TTTAAA 1 cut(s) 732
EaeI YGGCCR 2 cut(s) 655, 2061
Eam1104I CTCTTC 3 cut(s) 1028, 1230, 1530
EarI CTCTTC 3 cut(s) 1028, 1230, 1530
Eco130I CCWWGG 3 cut(s) 182, 273, 1774
Eco24I GRGCYC 1 cut(s) 2332
Eco32I GATATC 1 cut(s) 2135
Eco47I GGWCC 2 cut(s) 1516, 2383
Eco57I CTGAAG 6 cut(s) 786, 1068, 1086, 1746, 2140, 2454
Eco81I CCTNAGG 1 cut(s) 2113
EcoNI CCTNNNNNAGG 1 cut(s) 181
EcoRI GAATTC 1 cut(s) 451
EcoRII CCWGG 2 cut(s) 1114, 2365
EcoRV GATATC 1 cut(s) 2135
EcoT14I CCWWGG 3 cut(s) 182, 273, 1774
EcoT22I ATGCAT 1 cut(s) 2628
EcoT38I GRGCYC 1 cut(s) 2332
ErhI CCWWGG 3 cut(s) 182, 273, 1774
Esp3I CGTCTC 2 cut(s) 94, 235
FaeI CATG 9 cut(s) 406, 1778, 1899, 2012, 2070, 2179, 2188, 2269, 2635
FalI AAGNNNNNCTT 2 cut(s) 1300, 1332
FaqI GGGAC 1 cut(s) 2369
FatI CATG 9 cut(s) 402, 1774, 1895, 2008, 2066, 2175, 2184, 2265, 2631
FauNDI CATATG 1 cut(s) 1990
FbaI TGATCA 1 cut(s) 2005
FriOI GRGCYC 1 cut(s) 2332
FspBI CTAG 8 cut(s) 33, 183, 237, 417, 1229, 1302, 1911, 2770
GsuI CTGGAG 1 cut(s) 726
HaeIII GGCC 6 cut(s) 657, 962, 994, 1909, 2063, 2547
HapII CCGG 7 cut(s) 306, 654, 964, 1655, 2481, 2585, 2728
Hin1II CATG 9 cut(s) 406, 1778, 1899, 2012, 2070, 2179, 2188, 2269, 2635
HincII GTYRAC 1 cut(s) 2415
HindII GTYRAC 1 cut(s) 2415
HinfI GANTC 8 cut(s) 341, 427, 716, 1376, 1703, 1754, 1867, 2472
HpaII CCGG 7 cut(s) 306, 654, 964, 1655, 2481, 2585, 2728
HphI GGTGA 9 cut(s) 460, 517, 652, 1371, 1807, 2089, 2470, 2495, 2609
Hpy166II GTNNAC 5 cut(s) 122, 1665, 1691, 2415, 2503
Hpy188III TCNNGA 8 cut(s) 602, 713, 722, 743, 1106, 1259, 2009, 2585
Hpy8I GTNNAC 5 cut(s) 122, 1665, 1691, 2415, 2503
Hpy99I CGWCG 1 cut(s) 304
HpyCH4III ACNGT 4 cut(s) 88, 2419, 2557, 2573
HpyCH4IV ACGT 3 cut(s) 244, 782, 2057
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 170, 287, 1487, 1940, 1954, 2069, 2467, 2738
HpyF3I CTNAG 5 cut(s) 213, 1107, 1257, 2113, 2673
HpySE526I ACGT 3 cut(s) 244, 782, 2057
Hsp92II CATG 9 cut(s) 406, 1778, 1899, 2012, 2070, 2179, 2188, 2269, 2635
Kpn2I TCCGGA 1 cut(s) 2584
KroI GCCGGC 1 cut(s) 653
KroNI GCCGGC 1 cut(s) 655
Ksp22I TGATCA 1 cut(s) 2005
LmnI GCTCC 6 cut(s) 10, 469, 1288, 1561, 1639, 2587
Lsp1109I GCAGC 8 cut(s) 130, 158, 299, 1300, 1437, 1946, 2013, 2192
LweI GCATC 6 cut(s) 486, 595, 1356, 1873, 1930, 2247
MaeI CTAG 8 cut(s) 33, 183, 237, 417, 1229, 1302, 1911, 2770
MaeII ACGT 3 cut(s) 244, 782, 2057
MaeIII GTNAC 2 cut(s) 873, 1390
MbiI CCGCTC 1 cut(s) 978
MfeI CAATTG 2 cut(s) 474, 1887
MflI RGATCY 4 cut(s) 35, 531, 2281, 2455
MhlI GDGCHC 1 cut(s) 2332
MlsI TGGCCA 1 cut(s) 2063
MluNI TGGCCA 1 cut(s) 2063
MlyI GAGTC 3 cut(s) 1370, 1763, 2466
MmeI TCCRAC 2 cut(s) 1260, 2342
Mox20I TGGCCA 1 cut(s) 2063
Mph1103I ATGCAT 1 cut(s) 2628
MroI TCCGGA 1 cut(s) 2584
MroNI GCCGGC 1 cut(s) 653
MroXI GAANNNNTTC 3 cut(s) 782, 810, 1329
MscI TGGCCA 1 cut(s) 2063
MseI TTAA 9 cut(s) 47, 384, 731, 1218, 1353, 1613, 1857, 2052, 2084
MslI CAYNNNNRTG 3 cut(s) 512, 1742, 1962
Msp20I TGGCCA 1 cut(s) 2063
MspA1I CMGCKG 4 cut(s) 1373, 1399, 1428, 1937
MspCI CTTAAG 3 cut(s) 46, 383, 2051
MspI CCGG 7 cut(s) 306, 654, 964, 1655, 2481, 2585, 2728
MspR9I CCNGG 4 cut(s) 964, 1116, 2367, 2729
MunI CAATTG 2 cut(s) 474, 1887
Mva1269I GAATGC 1 cut(s) 2580
MvaI CCWGG 2 cut(s) 1116, 2367
MvnI CGCG 3 cut(s) 196, 1128, 1881
MwoI GCNNNNNNNGC 9 cut(s) 11, 170, 287, 1487, 1940, 1954, 2069, 2467, 2738
NaeI GCCGGC 1 cut(s) 655
NciI CCSGG 2 cut(s) 964, 2729
NcoI CCATGG 1 cut(s) 1774
NdeI CATATG 1 cut(s) 1990
NgoMIV GCCGGC 1 cut(s) 653
NlaIII CATG 9 cut(s) 406, 1778, 1899, 2012, 2070, 2179, 2188, 2269, 2635
NlaIV GGNNCC 6 cut(s) 6, 252, 471, 618, 2385, 2457
NmuCI GTSAC 2 cut(s) 873, 1390
NsiI ATGCAT 1 cut(s) 2628
NspI RCATGY 1 cut(s) 1899
PagI TCATGA 1 cut(s) 2008
PctI GAATGC 1 cut(s) 2580
PdiI GCCGGC 1 cut(s) 655
PdmI GAANNNNTTC 3 cut(s) 782, 810, 1329
PfeI GAWTC 5 cut(s) 341, 427, 716, 1703, 1867
PinAI ACCGGT 1 cut(s) 2480
PleI GAGTC 3 cut(s) 1370, 1762, 2466
PpsI GAGTC 3 cut(s) 1370, 1762, 2466
Psp6I CCWGG 2 cut(s) 1114, 2365
PspGI CCWGG 2 cut(s) 1114, 2365
PspN4I GGNNCC 6 cut(s) 6, 252, 471, 618, 2385, 2457
PspPI GGNCC 4 cut(s) 961, 992, 1516, 2383
PstI CTGCAG 2 cut(s) 148, 1936
PsuI RGATCY 4 cut(s) 35, 531, 2281, 2455
PvuII CAGCTG 3 cut(s) 1373, 1428, 1937
RsaI GTAC 4 cut(s) 698, 819, 1125, 1894
RsaNI GTAC 4 cut(s) 697, 818, 1124, 1893
RseI CAYNNNNRTG 3 cut(s) 512, 1742, 1962
SaqAI TTAA 9 cut(s) 47, 384, 731, 1218, 1353, 1613, 1857, 2052, 2084
Sau96I GGNCC 4 cut(s) 961, 992, 1516, 2383
SchI GAGTC 3 cut(s) 1370, 1763, 2466
ScrFI CCNGG 4 cut(s) 964, 1116, 2367, 2729
SduI GDGCHC 1 cut(s) 2332
SfaNI GCATC 6 cut(s) 486, 595, 1356, 1873, 1930, 2247
SfcI CTRYAG 3 cut(s) 39, 144, 1932
SgrAI CRCCGGYG 1 cut(s) 2480
SinI GGWCC 2 cut(s) 1516, 2383
SmiMI CAYNNNNRTG 3 cut(s) 512, 1742, 1962
SmlI CTYRAG 3 cut(s) 46, 383, 2051
SmoI CTYRAG 3 cut(s) 46, 383, 2051
SsiI CCGC 9 cut(s) 59, 194, 978, 1128, 1155, 1397, 1479, 1879, 2459
SspI AATATT 2 cut(s) 1672, 2520
SspMI CTAG 8 cut(s) 33, 183, 237, 417, 1229, 1302, 1911, 2770
StyD4I CCNGG 4 cut(s) 962, 1114, 2365, 2727
StyI CCWWGG 3 cut(s) 182, 273, 1774
TaaI ACNGT 4 cut(s) 88, 2419, 2557, 2573
TaiI ACGT 3 cut(s) 247, 785, 2060
TaqI TCGA 9 cut(s) 23, 430, 754, 868, 1014, 1583, 1811, 2137, 2252
TauI GCSGC 2 cut(s) 981, 1481
TfiI GAWTC 5 cut(s) 341, 427, 716, 1703, 1867
Tru1I TTAA 9 cut(s) 47, 384, 731, 1218, 1353, 1613, 1857, 2052, 2084
Tru9I TTAA 9 cut(s) 47, 384, 731, 1218, 1353, 1613, 1857, 2052, 2084
TscAI CASTG 4 cut(s) 370, 1005, 1936, 2437
TseFI GTSAC 2 cut(s) 873, 1390
TseI GCWGC 8 cut(s) 143, 146, 287, 1313, 1425, 1934, 2026, 2205
Tsp45I GTSAC 2 cut(s) 873, 1390
TspGWI ACGGA 2 cut(s) 812, 892
TspRI CASTG 4 cut(s) 370, 1005, 1936, 2437
Vha464I CTTAAG 3 cut(s) 46, 383, 2051
VpaK11BI GGWCC 2 cut(s) 1516, 2383
XagI CCTNNNNNAGG 1 cut(s) 181
XapI RAATTY 3 cut(s) 268, 451, 1470
XceI RCATGY 1 cut(s) 1899
XcmI CCANNNNNNNNNTGG 3 cut(s) 280, 1276, 2182
XmaJI CCTAGG 1 cut(s) 182
XmnI GAANNNNTTC 3 cut(s) 782, 810, 1329
XspI CTAG 8 cut(s) 33, 183, 237, 417, 1229, 1302, 1911, 2770
Zsp2I ATGCAT 1 cut(s) 2628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.