Rorug05G0494000

Uncharacterized protein conserved in bacteria (DUF2062)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
67660647 .. 67667728
7082 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0494000.1

Sequence Viewer

Length: 5115 bp
ATGGGTTTTGGTGCAGAGGATATACTAGTTTGTGTATGGAGGTTCCTTCACTTTTCGATGGGAACCAGTTCCAAGTGTATGCAGAACCACCCCTTTGTTTCAGGCGCTTTTTTATTCTTGTTCCTCCTTTATGCATTTTTCAATCTATTTGTTTTCTTCTCTCCATTTCTCGTCTGCGTGGCTATTCTTGTTAGAATTTTTTGGACTTCTGGAGGACTGATAATCCTAGAAGCCAAGCGAAATGAGAAACCGAGAAGTAATAAAATGCCGGGTAAAAATTCTGGATCTGCTGGAGGTGCTGCTGTGGTTAATCGAGACGGGAGCTCTTGCATACAAAAGCAGAAGAGTAGACGAACTAATGTCAAAAGGCAATGGGATGCACAAAGCGAGAAGAAGGAAAAAGAGTTGTCTACATTGGCAACTTCTCCTATTGATTTGGTTAGTAAAACTGTCTTGCTTGGCAAAGAAGTAAGGGCTTTGAACATGCGCGAGAGAGAAAGAGCATTTGATCATGGAGAGAGTTCCAATGCAAAAAGGTCCACCGCTGAATCCATTCAAGTGCTTAATGACGACCATTCGATCCTAGATTCTGATCGAGATATCTTGTCATCAAGCTCATCCGATGACGAGTCTGAAAATTTTGAAGGTGGTGGTAGGAAGGAAGAAGCAGCACAACAGGATGGGACTAAGGCAGTGCAGTGGACAGACGATGATCAAAGGAATCTAATGGATCTTGGACATTCCGAGATAGAAAGAAACAAGAGACTGGAGAGTTTGATTGCCAGAAGAAGAGCAAGAAAGTTATTCAAAATGCAGATTGAGAAAGGCCTAATTGACTTGGATACTATCCTACCAAGTCAAATTGCTCCCCTTTTTATTGCAAAGAACAATCCATTCATTGCTGAGATGGACGGCATGCAAACGCCTGGTTCAGCCCCTTCGGTAATGTTCCCAGCGAAAAACCCATTTGATCTTCCATATGATGCACTGGAGGAGAAGCCGGATCTTAAGGCAGATAGTTTCCAACAAGAATTCACAGCAGTCGCCCAGAAAGACATGCTATATTGTAGGCATGAGAGCTTCTGTTACGGTGCTGCTTACCCATTAGAACCTAGGAACAGAGCAGTAGATGGAGTGGGGTTCTCAAGATTCAGAAACCAATCAGATTTGGGACCTCATGATAGGCGTATTGAAAGAATGCTGTCGAACAAAGGAGAGCATGACGAGCTTGTTGAAACACTTTTGGCAGAAGTAGAAGCAAAAAACATCTCCCATATTGACAGCATTTCTGAAGTTGTTGACAGCGAAGCTACAACACGTAATCAAGTGACAACTTCAGGGGAAGCCAAAAACGAAAGAAGTAGACAAACCCAAAGAGAGACTGATATCAAAGAAATGAGAGAGACGAAAAATGATCAAAATGTGGATGTAATGTCTACTAGAAGTGCAGCTCACATGGAGCCACATGTAACTGATGACAGCAATGATGAGTCAACCTCATCGGAAGAAGATGAACGCCACTTTACTGCTAATAGATCTGGATTCTCTCAACATGCAGCATCAAGAGTGGGACGTGTTCCGCCTAAACCTCTTAACTGTTCAATTCCTAGCCCATCAAATGAAAGGGGAAGATTGGAAGACCGTTTGTTTTATGCAGAGAGGGGTCCTTGTCATACTCCCACGTACTCTATCGCTTCTGATCTGCAGGTGGAGGTTTCAGACATTGGTTCACCTCCGCTAACAGTTGATGGGGCGAATTCGCCCACTGATAGAGAATCACTGAACTTAGATGGGGACTTCGAGAGAGAGTATATGTGGGCAGCATCATCATCTCAATCATCCAGAACAGAAGAAAGTGAATCAAAATTCAGGGACATGCGTGGCTTCAGTGAGAAGGACTTACCAAGCATGGGATTTTCAGGAAACAGCTGTAAGAACACCAAGGACGTTGCTGAATCCTCCATGCATTTGCAACAGCCAGATGAACTAGATGACATGTACTCATTGTCATCTACAATGACAGGAATAAAAGCAGACAGTAGAACCCATTCAATGAGTTTAGAGGATGTCGGACAAGTAGTGGAAGAAATTGGGAAGCCAAGCACTTCTGGTTTGTCAAATGCACCTTCACCTGTAAATCAAGTCGAAAAACTGAAGTCGTCAGAGAAGTTAGTATCTCAACCAAAGGGATCATCATCTAATCCTCCCGATGAGACTACTAAGGTGAATGCTGTGGCTGCCAACACAATCAATGATTTGAAAGATGAAAAGAAGAAGAAAGACAGAGATGGTGAAGCGAAGAGTGGGATGTCAAAACCAAGTGAGGGGACTGTTGGAGAATCAAGTAGCAAGGAGGGAGATTCTGTAAATCCTGTGATACAACCAATAAAGGACAATAATAATCCTGCAGGAGATCCTCAAAAGGTAACTAAAAATGAGGGCAGCAAGGACATGTTAAAGCCAATTGATGCTATAAAGAACACTAATCCAAATCAAGACAGTAAAGATGAGCAACGTACTTCACAAAATAAAATTTCTGAGGAAAGGCAGGCTTCTAAAGATCCCATTGCATCAGCTGTTCAGCAAAATTTGGCGACTCAAGAGGAACAATGTAAGCCTCCGGAGAAGTCCACTAAGGATGCCAACATTATACTGAAAAAACCAGCAGAAGATGTCTCACCACAAGGAAAGGAAATTGCTGCAGAATTGAAAAAACCAGCTGAAGAAGTTGGGATTGTATCCCAAAAAGCAACAGAGGCTAATGCAGAATTGAAGAAAACAGACAAAAGAGATGTAAAGCAAAAAGAAACAGAGCTAGCTCCAGAATTGAAAAAACCAGCTGAAGAAGTTGGGAGTGTACTGCAAAAAGAAGCAGTCGCTCCTGGAGAATCAAAAAAAGTAGCTGAAGAAATTGGGAGGATATCACAAAAAGCATCAGAGGCTCCTGCAGAAGTGAAAAAACCAGCTGAAAGAATTGAAAGTGATTCACAAAAAGCAACAGAGGCTCCTGCAGAATTGAAGAGACAAGATGAAAAAGTAGAAAGTGTATCACAAAAAGCAACAACGACTGCTCAAGAATTGAAAAAACCAGCTGAAGAAATACAAAGTGTATCACCAAAACCAGCAGAGGCTCTTGCAGAATTGAAAAGATCAACTGAAGACGTTGGGAGTGTATCAAAAAAACCAATAGAGGCTTCTGCAGAGTTGAAAAAATCAGTTGAAGAAACAGCAAGTGTTTCACAAAAAGCAGCAGAGGCTTCTGCAGAATTGAAAAGATCAAGTGAAGAAGTTGGGAGTGTATCCAAAAAATTAATAGAGGCTTCTGCAGAGTCTGTAACAAAAAAAGAAACAGAGATTCTTCAGGAGTTGAAAAAAGCATCAGAGGCTCCTGCAGAAGTGAAGAAACCAGCTGAAAGAATTGAAAGTGATTCACAAAAAGCAACAGAGGCTTCTGCAGAACTGAAGGAACACATTGAAAAAGTAGAAAGTGTAGCACAAAAAGCAACAACAACTGCCCCAGAATTGAAAAAACCAGCTGAAGAAATACAAAGTGCATCACAAAAAGCAGCAGAGGCTCCTGCAGAATTGAAAAGATCAAGTGAAGAAGTTGGGAGTGTATTGAAAAAACCAATAGAGGCTTTTGCAGAGTTGAAAAAATCAGTTGAAGAAACAGCAAGTGTTCCACCAAAAGCAGCAGAGGCTTCTGCAGAATTGAAAAGATCAAGTGAAGAAGTTGGGAGTGTATCGAAAGAATCAATAGAGGCTTCTGCAGAGTCTGTAACAAAAAAAGAAACAGAGGTTCTTCAGGAGTTGAAAAAAGCATCAGAGGCTCCTGTAGAAGTGAAAAAACCAGCTGAAAGAATTGAAAGTGATTCACAAAAAGCAACAGAGGCTCCTGCAGAATTGAAGAAACAAGTTGAAAAAGTAGCATCTGAGGCTCCTGCAGAAGTGAAAAAACCAGCTGAAAGAATTGAAAGTGGTTCACAAAAAGCAACAGAGGCTTCTGCAGAATTGAAGAAACAAGTTGAAAAAGTAGAAAGTGTATCACAAAAAGCAACAACGACTGCTCTAGAATTGAAAAAACCAGCTGAAGAAATACAAAGAGCATCACAAAAACCAGCAGAGGCTCTGTTGAAAAGATCAAGTGAAGAAGTTGGGAGTGGATCAGAAAAACCAATAGAGGCTTCTGCAGAGTTGAAAAAATCAGTTGAAGAAACAGCAAGTGTTTCACAAAAAGCAGCAGAGGCTTCTACAGAATTGAAAAGATCAAGTGAAGAAGTTGGGAGTGTATCCAAAAAATTAATAGAGGCTTCTGCAGAGTCTGTAACAAAAAAAGAAACAGAGGTTCTTCAGGAGTTAAAAAAATCAGACAAAGAAAGTGGGAGCATAACGCAAAAGGAAACAGAGGCTAATGCAGGTGTGAGGAACCAAGCTACAGAGGGTCCACCAGAAGTGAAAAACCAAGCTGAAGACACTGCAAGCTTAATGCAAAAGGCCACTAAGACTGCTGTAGAATTGACAAGTCCAGCTAAAGAAACTGGAAGTGTATCAGAAAATGCAACTGGAGCTACTGCAGAAATGAAAAAATCTAAGACAGATATCGGAAGTGTCTTACAAAATGCAACAGGTGCTACTGCAGAATTGAAAAAACCATCTGAAGATATTGGAAATGCATTGCAAAAAGCACCAGATACAACTGCAGAACTGAAAAGACCAGCTGAAGTAAATGGAAGTGTATCACAAAAAGAAAAAGAAGCTCCATTGGAAATTAAAAAAACTGTTGAAGAAATCGCAAATGTGTCGCAAAAAGGATCTGAGGTTGCTGCAGAACTGAAAAATCCAGCTAAAAAAAGTGAAGATGTATCAGAAAAAGCAAAAGAGGTTTCTACCATGTTGAAAAGCCCAACTGTGGAAACTGGAAATGTTTCACAAAAAGCAACAGAGGTTGCTGCAGAGATGAAAAAAACAACTGACGAGATTGGAACTTTAGCACAAAAGGCAAACGAGGCTGTTACAGAATTGAAAAAATCAGCTGAAGAAATTGGTAATGTACCGCAAAATAAAGTTGAGGCTCCTGTGGAATTGAAAAAATCAGTTGAAGAAATCAAAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1704

Amino Acids

185.33

Weight (kDa)

5.27

Isoelectric Point (pI)

55.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1696, 4406
Acc36I ACCTGC 2 cut(s) 1696, 4406
AccI GTMKAC 4 cut(s) 349, 410, 1363, 1436
AccII CGCG 1 cut(s) 489
AccIII TCCGGA 1 cut(s) 2620
AciI CCGC 4 cut(s) 543, 1580, 1736, 5054
AclWI GGATC 9 cut(s) 292, 574, 738, 1011, 2197, 2408, 2555, 4171, 4819
AcsI RAATTY 8 cut(s) 195, 277, 637, 1031, 1756, 1865, 2532, 2587
AfaI GTAC 5 cut(s) 1685, 2000, 2518, 2859, 5052
AfiI CCNNNNNNNGG 3 cut(s) 1910, 2324, 4909
AflII CTTAAG 1 cut(s) 1007
AflIII ACRYGT 5 cut(s) 1316, 1465, 1573, 1995, 2451
AhlI ACTAGT 1 cut(s) 25
AjiI CACGTC 1 cut(s) 1574
AjnI CCWGG 2 cut(s) 925, 2881
AjuI GAANNNNNNNTTGG 4 cut(s) 3178, 3210, 4168, 4200
Alw21I GWGCWC 1 cut(s) 326
Alw26I GTCTC 7 cut(s) 309, 757, 1373, 1397, 2207, 2680, 3016
AlwI GGATC 9 cut(s) 292, 574, 738, 1011, 2197, 2408, 2555, 4171, 4819
AlwNI CAGNNNCTG 3 cut(s) 3332, 3776, 4322
Aor13HI TCCGGA 1 cut(s) 2620
AoxI GGCC 2 cut(s) 826, 4494
ApoI RAATTY 8 cut(s) 195, 277, 637, 1031, 1756, 1865, 2532, 2587
AseI ATTAAT 2 cut(s) 3311, 4301
Asp700I GAANNNNTTC 4 cut(s) 67, 552, 2047, 4924
AspA2I CCTAGG 1 cut(s) 1112
AspLEI GCGC 2 cut(s) 107, 489
AspS9I GGNCC 4 cut(s) 537, 1172, 1664, 4442
AsuC2I CCSGG 1 cut(s) 270
AsuHPI GGTGA 6 cut(s) 1722, 2121, 2236, 2303, 2670, 3105
AsuNHI GCTAGC 1 cut(s) 2815
AvaII GGWCC 4 cut(s) 537, 1172, 1664, 4442
AvrII CCTAGG 1 cut(s) 1112
BanII GRGCYC 1 cut(s) 326
BbsI GAAGAC 3 cut(s) 1644, 3165, 4476
Bbv12I GWGCWC 1 cut(s) 326
BccI CCATC 9 cut(s) 52, 674, 901, 1124, 1621, 1742, 1784, 2282, 4660
BceAI ACGGC 1 cut(s) 928
BcgI CGANNNNNNTGC 2 cut(s) 4782, 4816
BciT130I CCWGG 2 cut(s) 927, 2883
BciVI GTATCC 4 cut(s) 835, 2749, 3310, 4300
BclI TGATCA 3 cut(s) 508, 712, 1414
BcnI CCSGG 1 cut(s) 270
BcoDI GTCTC 7 cut(s) 309, 757, 1373, 1397, 2207, 2680, 3016
BcuI ACTAGT 1 cut(s) 25
BfaI CTAG 9 cut(s) 26, 227, 584, 1113, 1440, 1608, 1988, 2816, 4070
BfoI RGCGCY 1 cut(s) 108
BfrI CTTAAG 1 cut(s) 1007
BfuAI ACCTGC 2 cut(s) 1696, 4406
BfuI GTATCC 4 cut(s) 835, 2749, 3310, 4300
BglII AGATCT 1 cut(s) 1535
BlnI CCTAGG 1 cut(s) 1112
Bme1390I CCNGG 3 cut(s) 270, 927, 2883
Bme18I GGWCC 4 cut(s) 537, 1172, 1664, 4442
BmgBI CACGTC 1 cut(s) 1574
BmgT120I GGNCC 4 cut(s) 537, 1172, 1664, 4442
BmrFI CCNGG 3 cut(s) 270, 927, 2883
BmtI GCTAGC 1 cut(s) 2819
BpiI GAAGAC 3 cut(s) 1644, 3165, 4476
BplI GAGNNNNNCTC 2 cut(s) 1481, 1513
BpmI CTGGAG 7 cut(s) 231, 312, 788, 1010, 2805, 2904, 4584
BpuEI CTTGAG 3 cut(s) 1129, 2583, 3057
BpuMI CCSGG 1 cut(s) 270
BsaAI YACGTR 2 cut(s) 1319, 1683
BsaBI GATNNNNATC 2 cut(s) 591, 2194
BsaJI CCNNGG 2 cut(s) 1112, 1941
BsaWI WCCGGW 1 cut(s) 2620
BsaXI ACNNNNNCTCC 6 cut(s) 2349, 2379, 2989, 3019, 3877, 3907
Bsc4I CCNNNNNNNGG 3 cut(s) 1910, 2324, 4909
Bse1I ACTGG 6 cut(s) 66, 771, 993, 4543, 4567, 4921
Bse3DI GCAATG 5 cut(s) 377, 897, 1489, 2565, 4673
Bse8I GATNNNNATC 2 cut(s) 591, 2194
BseAI TCCGGA 1 cut(s) 2620
BseBI CCWGG 2 cut(s) 927, 2883
BseDI CCNNGG 2 cut(s) 1112, 1941
BseGI GGATG 8 cut(s) 382, 617, 685, 1432, 1838, 2071, 2313, 2644
BseJI GATNNNNATC 2 cut(s) 591, 2194
BseLI CCNNNNNNNGG 3 cut(s) 1910, 2324, 4909
BseMI GCAATG 5 cut(s) 377, 897, 1489, 2565, 4673
BseMII CTCAG 4 cut(s) 894, 2529, 3924, 4806
BseNI ACTGG 6 cut(s) 66, 771, 993, 4543, 4567, 4921
BseRI GAGGAG 1 cut(s) 1007
BseYI CCCAGC 1 cut(s) 952
BsgI GTGCAG 3 cut(s) 33, 716, 1467
Bsh1236I CGCG 1 cut(s) 489
BshFI GGCC 2 cut(s) 828, 4496
BsiHKAI GWGCWC 1 cut(s) 326
BsiSI CCGG 3 cut(s) 269, 1001, 2621
BslFI GGGAC 6 cut(s) 697, 1185, 1584, 1808, 1886, 2341
BslI CCNNNNNNNGG 3 cut(s) 1910, 2324, 4909
BsmAI GTCTC 7 cut(s) 309, 757, 1373, 1397, 2207, 2680, 3016
BsmBI CGTCTC 2 cut(s) 309, 1397
BsmFI GGGAC 6 cut(s) 697, 1185, 1584, 1808, 1886, 2341
BsmI GAATGC 2 cut(s) 1203, 2233
BsnI GGCC 2 cut(s) 828, 4496
Bsp1286I GDGCHC 1 cut(s) 326
Bsp13I TCCGGA 1 cut(s) 2620
BspACI CCGC 4 cut(s) 543, 1580, 1736, 5054
BspANI GGCC 2 cut(s) 828, 4496
BspCNI CTCAG 4 cut(s) 895, 2530, 3925, 4807
BspEI TCCGGA 1 cut(s) 2620
BspFNI CGCG 1 cut(s) 489
BspHI TCATGA 1 cut(s) 1177
BspMI ACCTGC 2 cut(s) 1696, 4406
BspOI GCTAGC 1 cut(s) 2819
BspPI GGATC 9 cut(s) 292, 574, 738, 1011, 2197, 2408, 2555, 4171, 4819
BspQI GCTCTTC 1 cut(s) 784
BspTI CTTAAG 1 cut(s) 1007
BsrDI GCAATG 5 cut(s) 377, 897, 1489, 2565, 4673
BsrI ACTGG 6 cut(s) 66, 771, 993, 4543, 4567, 4921
BssECI CCNNGG 2 cut(s) 1112, 1941
BssT1I CCWWGG 2 cut(s) 1112, 1941
Bst2UI CCWGG 2 cut(s) 927, 2883
Bst6I CTCTTC 4 cut(s) 338, 784, 2294, 3014
BstAFI CTTAAG 1 cut(s) 1007
BstAPI GCANNNNNTGC 1 cut(s) 4628
BstBAI YACGTR 2 cut(s) 1319, 1683
BstC8I GCNNGC 4 cut(s) 917, 2550, 2817, 4480
BstF5I GGATG 8 cut(s) 382, 617, 685, 1432, 1838, 2071, 2313, 2644
BstFNI CGCG 1 cut(s) 489
BstH2I RGCGCY 1 cut(s) 108
BstHHI GCGC 2 cut(s) 107, 489
BstMAI GTCTC 7 cut(s) 309, 757, 1373, 1397, 2207, 2680, 3016
BstNI CCWGG 2 cut(s) 927, 2883
BstNSI RCATGY 8 cut(s) 487, 919, 1060, 1469, 1556, 1879, 1999, 2455
BstSCI CCNGG 3 cut(s) 268, 925, 2881
BstUI CGCG 1 cut(s) 489
BstV2I GAAGAC 3 cut(s) 1644, 3165, 4476
BstX2I RGATCY 7 cut(s) 284, 730, 1003, 1535, 2413, 2560, 4811
BstYI RGATCY 7 cut(s) 284, 730, 1003, 1535, 2413, 2560, 4811
BsuI GTATCC 4 cut(s) 835, 2749, 3310, 4300
BsuRI GGCC 2 cut(s) 828, 4496
BtrI CACGTC 1 cut(s) 1574
BtsCI GGATG 8 cut(s) 382, 617, 685, 1432, 1838, 2071, 2313, 2644
BtsI GCAGTG 3 cut(s) 699, 704, 4473
BtsIMutI CAGTG 7 cut(s) 699, 704, 986, 1764, 1778, 1894, 4473
BveI ACCTGC 2 cut(s) 1696, 4406
Cac8I GCNNGC 4 cut(s) 917, 2550, 2817, 4480
CaiI CAGNNNCTG 3 cut(s) 3332, 3776, 4322
CciI TCATGA 1 cut(s) 1177
CfoI GCGC 2 cut(s) 107, 489
Cfr13I GGNCC 4 cut(s) 537, 1172, 1664, 4442
Csp6I GTAC 5 cut(s) 1684, 1999, 2517, 2858, 5051
CspCI CAANNNNNGTGG 2 cut(s) 4360, 4395
CviQI GTAC 5 cut(s) 1684, 1999, 2517, 2858, 5051
Eam1104I CTCTTC 4 cut(s) 338, 784, 2294, 3014
EarI CTCTTC 4 cut(s) 338, 784, 2294, 3014
EciI GGCGGA 1 cut(s) 1569
Ecl136II GAGCTC 1 cut(s) 324
Eco130I CCWWGG 2 cut(s) 1112, 1941
Eco147I AGGCCT 1 cut(s) 828
Eco24I GRGCYC 1 cut(s) 326
Eco32I GATATC 4 cut(s) 601, 1387, 2922, 4600
Eco47I GGWCC 4 cut(s) 537, 1172, 1664, 4442
Eco53kI GAGCTC 1 cut(s) 324
EcoICRI GAGCTC 1 cut(s) 324
EcoO109I RGGNCCY 2 cut(s) 1172, 1664
EcoRI GAATTC 2 cut(s) 1031, 1756
EcoRII CCWGG 2 cut(s) 925, 2881
EcoRV GATATC 4 cut(s) 601, 1387, 2922, 4600
EcoT14I CCWWGG 2 cut(s) 1112, 1941
EcoT22I ATGCAT 3 cut(s) 136, 1968, 4675
EcoT38I GRGCYC 1 cut(s) 326
ErhI CCWWGG 2 cut(s) 1112, 1941
Esp3I CGTCTC 2 cut(s) 309, 1397
FalI AAGNNNNNCTT 2 cut(s) 2536, 2568
FaqI GGGAC 6 cut(s) 697, 1185, 1584, 1808, 1886, 2341
FauNDI CATATG 1 cut(s) 979
FbaI TGATCA 3 cut(s) 508, 712, 1414
FblI GTMKAC 4 cut(s) 349, 410, 1363, 1436
FokI GGATG 8 cut(s) 389, 604, 692, 1439, 1825, 2078, 2320, 2651
FriOI GRGCYC 1 cut(s) 326
FspBI CTAG 9 cut(s) 26, 227, 584, 1113, 1440, 1608, 1988, 2816, 4070
GlaI GCGC 2 cut(s) 106, 488
GsaI CCCAGC 1 cut(s) 956
GsuI CTGGAG 7 cut(s) 231, 312, 788, 1010, 2805, 2904, 4584
HaeII RGCGCY 1 cut(s) 108
HaeIII GGCC 2 cut(s) 828, 4496
HapII CCGG 3 cut(s) 269, 1001, 2621
HhaI GCGC 2 cut(s) 107, 489
Hin6I GCGC 2 cut(s) 105, 487
HinP1I GCGC 2 cut(s) 105, 487
HincII GTYRAC 2 cut(s) 1300, 1494
HindII GTYRAC 2 cut(s) 1300, 1494
HindIII AAGCTT 1 cut(s) 4480
HpaII CCGG 3 cut(s) 269, 1001, 2621
HphI GGTGA 6 cut(s) 1722, 2121, 2236, 2303, 2670, 3105
HpyAV CCTTC 8 cut(s) 56, 388, 638, 652, 948, 1888, 2136, 3457
HpyCH4IV ACGT 6 cut(s) 1318, 1573, 1682, 1947, 2515, 3162
HpySE526I ACGT 6 cut(s) 1318, 1573, 1682, 1947, 2515, 3162
HspAI GCGC 2 cut(s) 105, 487
Kpn2I TCCGGA 1 cut(s) 2620
Ksp22I TGATCA 3 cut(s) 508, 712, 1414
LguI GCTCTTC 1 cut(s) 784
MaeI CTAG 9 cut(s) 26, 227, 584, 1113, 1440, 1608, 1988, 2816, 4070
MaeII ACGT 6 cut(s) 1318, 1573, 1682, 1947, 2515, 3162
MaeIII GTNAC 8 cut(s) 1085, 1327, 1468, 2425, 3334, 3778, 4324, 5011
MfeI CAATTG 1 cut(s) 2463
MflI RGATCY 7 cut(s) 284, 730, 1003, 1535, 2413, 2560, 4811
MhlI GDGCHC 1 cut(s) 326
MlyI GAGTC 6 cut(s) 638, 1499, 2590, 3338, 3782, 4328
MmeI TCCRAC 3 cut(s) 1048, 2050, 2314
Mph1103I ATGCAT 3 cut(s) 136, 1968, 4675
MroI TCCGGA 1 cut(s) 2620
MroXI GAANNNNTTC 4 cut(s) 67, 552, 2047, 4924
MslI CAYNNNNRTG 1 cut(s) 557
MspCI CTTAAG 1 cut(s) 1007
MspI CCGG 3 cut(s) 269, 1001, 2621
MspR9I CCNGG 3 cut(s) 270, 927, 2883
MunI CAATTG 1 cut(s) 2463
Mva1269I GAATGC 2 cut(s) 1203, 2233
MvaI CCWGG 2 cut(s) 927, 2883
MvnI CGCG 1 cut(s) 489
NciI CCSGG 1 cut(s) 270
NdeI CATATG 1 cut(s) 979
NheI GCTAGC 1 cut(s) 2815
NmuCI GTSAC 1 cut(s) 1327
NsiI ATGCAT 3 cut(s) 136, 1968, 4675
NspI RCATGY 8 cut(s) 487, 919, 1060, 1469, 1556, 1879, 1999, 2455
PaeI GCATGC 1 cut(s) 919
PagI TCATGA 1 cut(s) 1177
PaqCI CACCTGC 2 cut(s) 1696, 4406
PceI AGGCCT 1 cut(s) 828
PciI ACATGT 3 cut(s) 1465, 1995, 2451
PciSI GCTCTTC 1 cut(s) 784
PctI GAATGC 2 cut(s) 1203, 2233
PdmI GAANNNNTTC 4 cut(s) 67, 552, 2047, 4924
PfoI TCCNGGA 1 cut(s) 2881
PleI GAGTC 6 cut(s) 637, 1498, 2590, 3337, 3781, 4327
PpsI GAGTC 6 cut(s) 637, 1498, 2590, 3337, 3781, 4327
Ppu21I YACGTR 2 cut(s) 1319, 1683
PpuMI RGGWCCY 2 cut(s) 1172, 1664
PscI ACATGT 3 cut(s) 1465, 1995, 2451
PshBI ATTAAT 2 cut(s) 3311, 4301
Psp124BI GAGCTC 1 cut(s) 326
Psp5II RGGWCCY 2 cut(s) 1172, 1664
Psp6I CCWGG 2 cut(s) 925, 2881
PspFI CCCAGC 1 cut(s) 952
PspGI CCWGG 2 cut(s) 925, 2881
PspPI GGNCC 4 cut(s) 537, 1172, 1664, 4442
PspPPI RGGWCCY 2 cut(s) 1172, 1664
PstNI CAGNNNCTG 3 cut(s) 3332, 3776, 4322
PsuI RGATCY 7 cut(s) 284, 730, 1003, 1535, 2413, 2560, 4811
RsaI GTAC 5 cut(s) 1685, 2000, 2518, 2859, 5052
RsaNI GTAC 5 cut(s) 1684, 1999, 2517, 2858, 5051
RseI CAYNNNNRTG 1 cut(s) 557
SacI GAGCTC 1 cut(s) 326
SapI GCTCTTC 1 cut(s) 784
Sau96I GGNCC 4 cut(s) 537, 1172, 1664, 4442
SbfI CCTGCAGG 1 cut(s) 2410
SchI GAGTC 6 cut(s) 638, 1499, 2590, 3338, 3782, 4328
ScrFI CCNGG 3 cut(s) 270, 927, 2883
SdaI CCTGCAGG 1 cut(s) 2410
SduI GDGCHC 1 cut(s) 326
SinI GGWCC 4 cut(s) 537, 1172, 1664, 4442
SmiMI CAYNNNNRTG 1 cut(s) 557
SmlI CTYRAG 4 cut(s) 1007, 1144, 2598, 3072
SmoI CTYRAG 4 cut(s) 1007, 1144, 2598, 3072
SpeI ACTAGT 1 cut(s) 25
SphI GCATGC 1 cut(s) 919
Sse8387I CCTGCAGG 1 cut(s) 2410
SseBI AGGCCT 1 cut(s) 828
SsiI CCGC 4 cut(s) 543, 1580, 1736, 5054
SspMI CTAG 9 cut(s) 26, 227, 584, 1113, 1440, 1608, 1988, 2816, 4070
SstI GAGCTC 1 cut(s) 326
StuI AGGCCT 1 cut(s) 828
StyD4I CCNGG 3 cut(s) 268, 925, 2881
StyI CCWWGG 2 cut(s) 1112, 1941
TaiI ACGT 6 cut(s) 1321, 1576, 1685, 1950, 2518, 3165
TaqI TCGA 8 cut(s) 56, 313, 578, 595, 1205, 1800, 2145, 3746
TatI WGTACW 2 cut(s) 1998, 2857
TscAI CASTG 7 cut(s) 699, 704, 993, 1771, 1785, 1894, 4480
TseFI GTSAC 1 cut(s) 1327
Tsp45I GTSAC 1 cut(s) 1327
TspDTI ATGAA 8 cut(s) 886, 1527, 1635, 1998, 2280, 3045, 4595, 4973
TspRI CASTG 7 cut(s) 699, 704, 993, 1771, 1785, 1894, 4480
Vha464I CTTAAG 1 cut(s) 1007
VpaK11BI GGWCC 4 cut(s) 537, 1172, 1664, 4442
VspI ATTAAT 2 cut(s) 3311, 4301
XapI RAATTY 8 cut(s) 195, 277, 637, 1031, 1756, 1865, 2532, 2587
XbaI TCTAGA 1 cut(s) 4069
XceI RCATGY 8 cut(s) 487, 919, 1060, 1469, 1556, 1879, 1999, 2455
XmaJI CCTAGG 1 cut(s) 1112
XmiI GTMKAC 4 cut(s) 349, 410, 1363, 1436
XmnI GAANNNNTTC 4 cut(s) 67, 552, 2047, 4924
XspI CTAG 9 cut(s) 26, 227, 584, 1113, 1440, 1608, 1988, 2816, 4070
Zsp2I ATGCAT 3 cut(s) 136, 1968, 4675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.