Putative rRNA methylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16445 |
| fragaria_vesca | FvH4_2g12161 FvH4_2g12161 FvH4_2g12161 FvH4_2g12161 FvH4_2g12161 |
| malus_domestica | MD05G1040700.v1.1 |
| prunus_persica | Prupe.8G055300_v2.0.a1 Prupe.8G055300_v2.0.a1 Prupe.8G055300_v2.0.a1 Prupe.8G055300_v2.0.a1 Prupe.8G055300_v2.0.a1 |
| pyrus_communis | pycom05g03330 |
| rosa_chinensis | RchiOBHm_Chr6g0272151 |
| rosa_laevigata | RLG00000013697 |
| rosa_multiflora | Rmu_sc0004606.1_g000002 Rmu_sc0013301.1_g000011 |
| rosa_roxburghii | Rroxscaffold_7G00196550 |
| rosa_rugosa | Rorug06G0066100 |
| rosa_samantha | Rh6AG183300 Rh6BG183800 Rh6CG184600 Rh6DG176300 |
| rosa_wichuraiana | Rw6G015780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 271 |
| AclWI | GGATC | 1 cut(s) | 318 |
| AcsI | RAATTY | 1 cut(s) | 257 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 179 |
| AgeI | ACCGGT | 1 cut(s) | 278 |
| AgsI | TTSAA | 2 cut(s) | 150, 262 |
| Alw26I | GTCTC | 1 cut(s) | 31 |
| AlwI | GGATC | 1 cut(s) | 318 |
| ApoI | RAATTY | 1 cut(s) | 257 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 143, 175 |
| AsiGI | ACCGGT | 1 cut(s) | 278 |
| BccI | CCATC | 1 cut(s) | 113 |
| BcoDI | GTCTC | 1 cut(s) | 31 |
| BfaI | CTAG | 1 cut(s) | 210 |
| BpmI | CTGGAG | 1 cut(s) | 59 |
| Bsa29I | ATCGAT | 1 cut(s) | 233 |
| BsaBI | GATNNNNATC | 1 cut(s) | 109 |
| BsaWI | WCCGGW | 2 cut(s) | 202, 278 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 179 |
| Bse118I | RCCGGY | 1 cut(s) | 278 |
| Bse8I | GATNNNNATC | 1 cut(s) | 109 |
| BseCI | ATCGAT | 1 cut(s) | 233 |
| BseGI | GGATG | 1 cut(s) | 124 |
| BseJI | GATNNNNATC | 1 cut(s) | 109 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 179 |
| BshTI | ACCGGT | 1 cut(s) | 278 |
| BshVI | ATCGAT | 1 cut(s) | 233 |
| BsiSI | CCGG | 2 cut(s) | 203, 279 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 179 |
| BsmAI | GTCTC | 1 cut(s) | 31 |
| BsmBI | CGTCTC | 1 cut(s) | 31 |
| Bsp143I | GATC | 4 cut(s) | 79, 104, 230, 310 |
| BspACI | CCGC | 1 cut(s) | 271 |
| BspDI | ATCGAT | 1 cut(s) | 233 |
| BspPI | GGATC | 1 cut(s) | 318 |
| BsrFI | RCCGGY | 1 cut(s) | 278 |
| BssAI | RCCGGY | 1 cut(s) | 278 |
| BssMI | GATC | 4 cut(s) | 79, 104, 230, 310 |
| Bst4CI | ACNGT | 1 cut(s) | 141 |
| BstF5I | GGATG | 1 cut(s) | 124 |
| BstKTI | GATC | 4 cut(s) | 82, 107, 233, 313 |
| BstMAI | GTCTC | 1 cut(s) | 31 |
| BstMBI | GATC | 4 cut(s) | 79, 104, 230, 310 |
| Bsu15I | ATCGAT | 1 cut(s) | 233 |
| BsuTUI | ATCGAT | 1 cut(s) | 233 |
| BtsCI | GGATG | 1 cut(s) | 124 |
| BtsIMutI | CAGTG | 1 cut(s) | 137 |
| Cfr10I | RCCGGY | 1 cut(s) | 278 |
| ClaI | ATCGAT | 1 cut(s) | 233 |
| CspAI | ACCGGT | 1 cut(s) | 278 |
| CviAII | CATG | 2 cut(s) | 179, 284 |
| DpnI | GATC | 4 cut(s) | 81, 106, 232, 312 |
| DpnII | GATC | 4 cut(s) | 79, 104, 230, 310 |
| EcoRI | GAATTC | 1 cut(s) | 257 |
| Esp3I | CGTCTC | 1 cut(s) | 31 |
| FaeI | CATG | 2 cut(s) | 182, 287 |
| FaiI | YATR | 5 cut(s) | 116, 180, 285, 295, 315 |
| FatI | CATG | 2 cut(s) | 178, 283 |
| FokI | GGATG | 1 cut(s) | 131 |
| FspBI | CTAG | 1 cut(s) | 210 |
| GsuI | CTGGAG | 1 cut(s) | 59 |
| HapII | CCGG | 2 cut(s) | 203, 279 |
| Hin1II | CATG | 2 cut(s) | 182, 287 |
| HinfI | GANTC | 2 cut(s) | 73, 124 |
| HpaII | CCGG | 2 cut(s) | 203, 279 |
| Hpy188I | TCNGA | 1 cut(s) | 72 |
| Hpy188III | TCNNGA | 3 cut(s) | 38, 77, 128 |
| HpyAV | CCTTC | 1 cut(s) | 183 |
| HpyCH4III | ACNGT | 1 cut(s) | 141 |
| Hsp92II | CATG | 2 cut(s) | 182, 287 |
| Kzo9I | GATC | 4 cut(s) | 79, 104, 230, 310 |
| LmnI | GCTCC | 1 cut(s) | 319 |
| LpnPI | CCDG | 7 cut(s) | 23, 113, 115, 175, 216, 292, 302 |
| MaeI | CTAG | 1 cut(s) | 210 |
| MaeIII | GTNAC | 2 cut(s) | 184, 205 |
| MalI | GATC | 4 cut(s) | 81, 106, 232, 312 |
| MboI | GATC | 4 cut(s) | 79, 104, 230, 310 |
| MboII | GAAGA | 1 cut(s) | 266 |
| MluCI | AATT | 2 cut(s) | 214, 257 |
| MlyI | GAGTC | 1 cut(s) | 82 |
| MnlI | CCTC | 4 cut(s) | 210, 239, 301, 310 |
| MspI | CCGG | 2 cut(s) | 203, 279 |
| NdeII | GATC | 4 cut(s) | 79, 104, 230, 310 |
| NlaIII | CATG | 2 cut(s) | 182, 287 |
| PfeI | GAWTC | 1 cut(s) | 124 |
| PinAI | ACCGGT | 1 cut(s) | 278 |
| PleI | GAGTC | 1 cut(s) | 81 |
| PpsI | GAGTC | 1 cut(s) | 81 |
| Sau3AI | GATC | 4 cut(s) | 79, 104, 230, 310 |
| SchI | GAGTC | 1 cut(s) | 82 |
| SetI | ASST | 1 cut(s) | 302 |
| Sse9I | AATT | 2 cut(s) | 214, 257 |
| SsiI | CCGC | 1 cut(s) | 271 |
| SspI | AATATT | 1 cut(s) | 266 |
| SspMI | CTAG | 1 cut(s) | 210 |
| TaaI | ACNGT | 1 cut(s) | 141 |
| TaqI | TCGA | 1 cut(s) | 233 |
| TasI | AATT | 2 cut(s) | 214, 257 |
| TfiI | GAWTC | 1 cut(s) | 124 |
| TscAI | CASTG | 1 cut(s) | 144 |
| TspDTI | ATGAA | 2 cut(s) | 17, 63 |
| TspGWI | ACGGA | 2 cut(s) | 13, 134 |
| TspRI | CASTG | 1 cut(s) | 144 |
| XapI | RAATTY | 1 cut(s) | 257 |
| XspI | CTAG | 1 cut(s) | 210 |