Rorug06G0077700

Belongs to the purine pyrimidine phosphoribosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
10400347 .. 10400847
501 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0077700.1

Sequence Viewer

Length: 321 bp
ATGTTCATCAGCGATCAATCAATAGCAAACAACTTGATTGATTGCTATGGGGAAGTGTTGAAGGACGAACTACAAAACAAAAATTCACAAAGTTTGGGAAGATCAACTTTTATGCATAGCATGTGTTGGCATGCAATTACCCATAATGAGGAATTTCACCACACGCTCTTGGTCTTCGACAAGGACATACCGCAATGGCTGCATTTTGATTCAATGAAACCAAGAAGAGCAGGAACAGGGGAGTGCTTTAAAAATATTAAAAAAATTGGTACGAAACTTCTTACTGACTATGTAACTAACCATGTAACTATCACTCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

106

Amino Acids

12.32

Weight (kDa)

6.69

Isoelectric Point (pI)

50.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013301)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 191
AcsI RAATTY 2 cut(s) 82, 152
AfaI GTAC 1 cut(s) 271
AfiI CCNNNNNNNGG 1 cut(s) 148
AgsI TTSAA 2 cut(s) 61, 213
ApeKI GCWGC 1 cut(s) 199
ApoI RAATTY 2 cut(s) 82, 152
AsuHPI GGTGA 1 cut(s) 149
BbsI GAAGAC 1 cut(s) 166
BbvI GCAGC 1 cut(s) 186
BisI GCNGC 1 cut(s) 200
BlsI GCNGC 1 cut(s) 201
BpiI GAAGAC 1 cut(s) 166
Bsc4I CCNNNNNNNGG 1 cut(s) 148
Bse3DI GCAATG 1 cut(s) 200
BseLI CCNNNNNNNGG 1 cut(s) 148
BseMI GCAATG 1 cut(s) 200
BseXI GCAGC 1 cut(s) 186
BslI CCNNNNNNNGG 1 cut(s) 148
Bsp143I GATC 2 cut(s) 13, 101
BspACI CCGC 1 cut(s) 191
BspQI GCTCTTC 1 cut(s) 220
BsrDI GCAATG 1 cut(s) 200
BssMI GATC 2 cut(s) 13, 101
Bst6I CTCTTC 1 cut(s) 220
BstAPI GCANNNNNTGC 1 cut(s) 199
BstC8I GCNNGC 1 cut(s) 132
BstKTI GATC 2 cut(s) 16, 104
BstMBI GATC 2 cut(s) 13, 101
BstMWI GCNNNNNNNGC 1 cut(s) 199
BstNSI RCATGY 2 cut(s) 124, 134
BstV1I GCAGC 1 cut(s) 186
BstV2I GAAGAC 1 cut(s) 166
BtsIMutI CAGTG 1 cut(s) 316
Cac8I GCNNGC 1 cut(s) 132
Csp6I GTAC 1 cut(s) 270
CviAII CATG 3 cut(s) 121, 131, 302
CviJI RGCY 1 cut(s) 199
CviKI_1 RGCY 1 cut(s) 199
CviQI GTAC 1 cut(s) 270
DpnI GATC 2 cut(s) 15, 103
DpnII GATC 2 cut(s) 13, 101
DraI TTTAAA 1 cut(s) 250
Eam1104I CTCTTC 1 cut(s) 220
EarI CTCTTC 1 cut(s) 220
EcoT22I ATGCAT 1 cut(s) 117
FaeI CATG 3 cut(s) 124, 134, 305
FaiI YATR 9 cut(s) 48, 113, 117, 122, 132, 144, 188, 291, 303
FalI AAGNNNNNCTT 2 cut(s) 91, 123
FatI CATG 3 cut(s) 120, 130, 301
Fnu4HI GCNGC 1 cut(s) 200
Fsp4HI GCNGC 1 cut(s) 200
GluI GCNGC 1 cut(s) 200
Hin1II CATG 3 cut(s) 124, 134, 305
HinfI GANTC 1 cut(s) 209
HphI GGTGA 1 cut(s) 149
HpyAV CCTTC 1 cut(s) 55
HpyCH4V TGCA 3 cut(s) 115, 134, 202
HpyF10VI GCNNNNNNNGC 1 cut(s) 199
Hsp92II CATG 3 cut(s) 124, 134, 305
Kzo9I GATC 2 cut(s) 13, 101
LguI GCTCTTC 1 cut(s) 220
LpnPI CCDG 2 cut(s) 216, 222
Lsp1109I GCAGC 1 cut(s) 186
MaeIII GTNAC 2 cut(s) 292, 304
MalI GATC 2 cut(s) 15, 103
MboI GATC 2 cut(s) 13, 101
MboII GAAGA 3 cut(s) 111, 166, 237
MluCI AATT 4 cut(s) 82, 135, 152, 264
MnlI CCTC 1 cut(s) 142
Mph1103I ATGCAT 1 cut(s) 117
MseI TTAA 2 cut(s) 249, 258
MwoI GCNNNNNNNGC 1 cut(s) 199
NdeII GATC 2 cut(s) 13, 101
NlaIII CATG 3 cut(s) 124, 134, 305
NsiI ATGCAT 1 cut(s) 117
NspI RCATGY 2 cut(s) 124, 134
PaeI GCATGC 1 cut(s) 134
PciSI GCTCTTC 1 cut(s) 220
PfeI GAWTC 1 cut(s) 209
PkrI GCNGC 1 cut(s) 201
RsaI GTAC 1 cut(s) 271
RsaNI GTAC 1 cut(s) 270
SapI GCTCTTC 1 cut(s) 220
SaqAI TTAA 2 cut(s) 249, 258
SatI GCNGC 1 cut(s) 200
Sau3AI GATC 2 cut(s) 13, 101
SphI GCATGC 1 cut(s) 134
Sse9I AATT 4 cut(s) 82, 135, 152, 264
SsiI CCGC 1 cut(s) 191
SspI AATATT 1 cut(s) 256
TaqI TCGA 1 cut(s) 177
TasI AATT 4 cut(s) 82, 135, 152, 264
TfiI GAWTC 1 cut(s) 209
Tru1I TTAA 2 cut(s) 249, 258
Tru9I TTAA 2 cut(s) 249, 258
TseI GCWGC 1 cut(s) 199
TspDTI ATGAA 1 cut(s) 230
XapI RAATTY 2 cut(s) 82, 152
XceI RCATGY 2 cut(s) 124, 134
Zsp2I ATGCAT 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.