Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0382581 |
| rosa_multiflora | Rmu_sc0005911.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00369740 Rroxscaffold_7G00160710 |
| rosa_rugosa | Rorug01G0430700 Rorug02G0018700 Rorug02G0094300 Rorug03G0105900 Rorug04G0121800 Rorug06G0135700 Rorug06G0239700 Rorug07G0300700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 67 |
| AcuI | CTGAAG | 1 cut(s) | 278 |
| AfaI | GTAC | 2 cut(s) | 5, 11 |
| AjnI | CCWGG | 1 cut(s) | 158 |
| AluBI | AGCT | 2 cut(s) | 207, 245 |
| AluI | AGCT | 2 cut(s) | 207, 245 |
| Alw26I | GTCTC | 1 cut(s) | 148 |
| Ama87I | CYCGRG | 1 cut(s) | 359 |
| AoxI | GGCC | 1 cut(s) | 284 |
| ApoI | RAATTY | 1 cut(s) | 67 |
| AsuHPI | GGTGA | 2 cut(s) | 239, 332 |
| AsuII | TTCGAA | 1 cut(s) | 183 |
| AvaI | CYCGRG | 1 cut(s) | 359 |
| BbsI | GAAGAC | 1 cut(s) | 172 |
| BccI | CCATC | 2 cut(s) | 218, 256 |
| BciT130I | CCWGG | 1 cut(s) | 160 |
| BcoDI | GTCTC | 1 cut(s) | 148 |
| BfaI | CTAG | 1 cut(s) | 204 |
| Bme1390I | CCNGG | 1 cut(s) | 160 |
| BmeT110I | CYCGRG | 1 cut(s) | 359 |
| BmrFI | CCNGG | 1 cut(s) | 160 |
| BmsI | GCATC | 2 cut(s) | 44, 145 |
| BpiI | GAAGAC | 1 cut(s) | 172 |
| Bpu14I | TTCGAA | 1 cut(s) | 183 |
| BsaI | GGTCTC | 1 cut(s) | 148 |
| BsaJI | CCNNGG | 2 cut(s) | 158, 360 |
| Bse1I | ACTGG | 1 cut(s) | 11 |
| BseBI | CCWGG | 1 cut(s) | 160 |
| BseDI | CCNNGG | 2 cut(s) | 158, 360 |
| BseNI | ACTGG | 1 cut(s) | 11 |
| BshFI | GGCC | 1 cut(s) | 286 |
| BsiHKCI | CYCGRG | 1 cut(s) | 359 |
| BsmAI | GTCTC | 1 cut(s) | 148 |
| BsnI | GGCC | 1 cut(s) | 286 |
| Bso31I | GGTCTC | 1 cut(s) | 148 |
| BsoBI | CYCGRG | 1 cut(s) | 359 |
| Bsp119I | TTCGAA | 1 cut(s) | 183 |
| BspANI | GGCC | 1 cut(s) | 286 |
| BspT104I | TTCGAA | 1 cut(s) | 183 |
| BspTNI | GGTCTC | 1 cut(s) | 148 |
| BsrI | ACTGG | 1 cut(s) | 11 |
| BssECI | CCNNGG | 2 cut(s) | 158, 360 |
| Bst2UI | CCWGG | 1 cut(s) | 160 |
| Bst4CI | ACNGT | 2 cut(s) | 178, 250 |
| BstBI | TTCGAA | 1 cut(s) | 183 |
| BstMAI | GTCTC | 1 cut(s) | 148 |
| BstNI | CCWGG | 1 cut(s) | 160 |
| BstSCI | CCNGG | 1 cut(s) | 158 |
| BstV2I | GAAGAC | 1 cut(s) | 172 |
| BsuRI | GGCC | 1 cut(s) | 286 |
| BtsIMutI | CAGTG | 1 cut(s) | 174 |
| Csp6I | GTAC | 2 cut(s) | 4, 10 |
| CviAII | CATG | 1 cut(s) | 97 |
| CviJI | RGCY | 4 cut(s) | 79, 207, 245, 286 |
| CviKI_1 | RGCY | 4 cut(s) | 79, 207, 245, 286 |
| CviQI | GTAC | 2 cut(s) | 4, 10 |
| Eco147I | AGGCCT | 1 cut(s) | 286 |
| Eco31I | GGTCTC | 1 cut(s) | 148 |
| Eco57I | CTGAAG | 1 cut(s) | 278 |
| Eco88I | CYCGRG | 1 cut(s) | 359 |
| EcoRII | CCWGG | 1 cut(s) | 158 |
| FaeI | CATG | 1 cut(s) | 100 |
| FaiI | YATR | 2 cut(s) | 98, 222 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 13, 45 |
| FatI | CATG | 1 cut(s) | 96 |
| FspBI | CTAG | 1 cut(s) | 204 |
| HaeIII | GGCC | 1 cut(s) | 286 |
| Hin1II | CATG | 1 cut(s) | 100 |
| HincII | GTYRAC | 1 cut(s) | 351 |
| HindII | GTYRAC | 1 cut(s) | 351 |
| HinfI | GANTC | 1 cut(s) | 119 |
| HpaI | GTTAAC | 1 cut(s) | 351 |
| HphI | GGTGA | 2 cut(s) | 239, 332 |
| Hpy166II | GTNNAC | 3 cut(s) | 174, 307, 351 |
| Hpy188I | TCNGA | 3 cut(s) | 18, 91, 258 |
| Hpy8I | GTNNAC | 3 cut(s) | 174, 307, 351 |
| HpyAV | CCTTC | 1 cut(s) | 323 |
| HpyCH4III | ACNGT | 2 cut(s) | 178, 250 |
| HpyCH4V | TGCA | 2 cut(s) | 136, 190 |
| Hsp92II | CATG | 1 cut(s) | 100 |
| KspAI | GTTAAC | 1 cut(s) | 351 |
| LpnPI | CCDG | 8 cut(s) | 93, 108, 145, 172, 176, 193, 287, 323 |
| LweI | GCATC | 2 cut(s) | 44, 145 |
| MaeI | CTAG | 1 cut(s) | 204 |
| MaeIII | GTNAC | 1 cut(s) | 265 |
| MboII | GAAGA | 3 cut(s) | 172, 206, 271 |
| MluCI | AATT | 1 cut(s) | 67 |
| MlyI | GAGTC | 1 cut(s) | 128 |
| MmeI | TCCRAC | 1 cut(s) | 124 |
| MnlI | CCTC | 2 cut(s) | 311, 355 |
| MseI | TTAA | 2 cut(s) | 314, 350 |
| MspR9I | CCNGG | 1 cut(s) | 160 |
| MvaI | CCWGG | 1 cut(s) | 160 |
| NlaIII | CATG | 1 cut(s) | 100 |
| NspV | TTCGAA | 1 cut(s) | 183 |
| PceI | AGGCCT | 1 cut(s) | 286 |
| PleI | GAGTC | 1 cut(s) | 127 |
| PpsI | GAGTC | 1 cut(s) | 127 |
| Psp6I | CCWGG | 1 cut(s) | 158 |
| PspGI | CCWGG | 1 cut(s) | 158 |
| RsaI | GTAC | 2 cut(s) | 5, 11 |
| RsaNI | GTAC | 2 cut(s) | 4, 10 |
| SaqAI | TTAA | 2 cut(s) | 314, 350 |
| SchI | GAGTC | 1 cut(s) | 128 |
| ScrFI | CCNGG | 1 cut(s) | 160 |
| SetI | ASST | 6 cut(s) | 127, 203, 209, 247, 312, 322 |
| SfaNI | GCATC | 2 cut(s) | 44, 145 |
| SfuI | TTCGAA | 1 cut(s) | 183 |
| Sse9I | AATT | 1 cut(s) | 67 |
| SseBI | AGGCCT | 1 cut(s) | 286 |
| SspMI | CTAG | 1 cut(s) | 204 |
| StuI | AGGCCT | 1 cut(s) | 286 |
| StyD4I | CCNGG | 1 cut(s) | 158 |
| TaaI | ACNGT | 2 cut(s) | 178, 250 |
| TaqI | TCGA | 3 cut(s) | 42, 48, 183 |
| TasI | AATT | 1 cut(s) | 67 |
| TatI | WGTACW | 1 cut(s) | 3 |
| Tru1I | TTAA | 2 cut(s) | 314, 350 |
| Tru9I | TTAA | 2 cut(s) | 314, 350 |
| TscAI | CASTG | 1 cut(s) | 181 |
| TspRI | CASTG | 1 cut(s) | 181 |
| XapI | RAATTY | 1 cut(s) | 67 |
| XspI | CTAG | 1 cut(s) | 204 |