Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0382581 |
| rosa_multiflora | Rmu_sc0005911.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00369740 Rroxscaffold_7G00160710 |
| rosa_rugosa | Rorug01G0430700 Rorug02G0018700 Rorug02G0094300 Rorug03G0105900 Rorug04G0121800 Rorug06G0135700 Rorug06G0239700 Rorug07G0300700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 108, 2541 |
| AccII | CGCG | 1 cut(s) | 1563 |
| AccIII | TCCGGA | 1 cut(s) | 1330 |
| AciI | CCGC | 6 cut(s) | 48, 72, 653, 1563, 2639, 2892 |
| AclWI | GGATC | 4 cut(s) | 306, 392, 1434, 2741 |
| AcsI | RAATTY | 5 cut(s) | 905, 1388, 1697, 2653, 2935 |
| AcuI | CTGAAG | 6 cut(s) | 32, 559, 980, 1575, 1800, 2541 |
| AcyI | GRCGYC | 1 cut(s) | 1615 |
| AdeI | CACNNNGTG | 1 cut(s) | 1637 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 311, 457, 836, 1000, 1888, 2922 |
| AflII | CTTAAG | 1 cut(s) | 2066 |
| AflIII | ACRYGT | 1 cut(s) | 2305 |
| AgeI | ACCGGT | 1 cut(s) | 2148 |
| AhlI | ACTAGT | 2 cut(s) | 277, 2671 |
| AjnI | CCWGG | 7 cut(s) | 191, 869, 972, 1870, 2320, 2776, 2815 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 83, 115, 2780, 2812 |
| AleI | CACNNNNGTG | 1 cut(s) | 201 |
| Alw21I | GWGCWC | 2 cut(s) | 224, 1319 |
| Alw26I | GTCTC | 1 cut(s) | 2987 |
| AlwI | GGATC | 4 cut(s) | 306, 392, 1434, 2741 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 198, 254, 1402, 1694 |
| Aor13HI | TCCGGA | 1 cut(s) | 1330 |
| AoxI | GGCC | 4 cut(s) | 291, 970, 2858, 2913 |
| ApoI | RAATTY | 5 cut(s) | 905, 1388, 1697, 2653, 2935 |
| AseI | ATTAAT | 1 cut(s) | 1326 |
| AsiGI | ACCGGT | 1 cut(s) | 2148 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1663 |
| AspS9I | GGNCC | 4 cut(s) | 771, 788, 797, 2858 |
| AsuHPI | GGTGA | 5 cut(s) | 1886, 2294, 2306, 2456, 2792 |
| AvaII | GGWCC | 3 cut(s) | 771, 788, 797 |
| BanII | GRGCYC | 1 cut(s) | 2771 |
| BbsI | GAAGAC | 2 cut(s) | 1055, 2902 |
| Bbv12I | GWGCWC | 2 cut(s) | 224, 1319 |
| BccI | CCATC | 6 cut(s) | 834, 917, 1151, 1247, 1748, 1891 |
| BceAI | ACGGC | 3 cut(s) | 61, 312, 1217 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 67, 101 |
| BciT130I | CCWGG | 7 cut(s) | 193, 871, 974, 1872, 2322, 2778, 2817 |
| BciVI | GTATCC | 1 cut(s) | 2338 |
| BcoDI | GTCTC | 1 cut(s) | 2987 |
| BcuI | ACTAGT | 2 cut(s) | 277, 2671 |
| BfaI | CTAG | 7 cut(s) | 237, 278, 1082, 1436, 1970, 2586, 2672 |
| BfmI | CTRYAG | 4 cut(s) | 159, 199, 633, 2268 |
| BfrI | CTTAAG | 1 cut(s) | 2066 |
| BfuI | GTATCC | 1 cut(s) | 2338 |
| BglII | AGATCT | 1 cut(s) | 1669 |
| BlpI | GCTNAGC | 1 cut(s) | 2868 |
| Bme1390I | CCNGG | 7 cut(s) | 193, 871, 974, 1872, 2322, 2778, 2817 |
| Bme18I | GGWCC | 3 cut(s) | 771, 788, 797 |
| BmgT120I | GGNCC | 4 cut(s) | 771, 788, 797, 2858 |
| BmiI | GGNNCC | 3 cut(s) | 462, 1005, 2319 |
| BmrFI | CCNGG | 7 cut(s) | 193, 871, 974, 1872, 2322, 2778, 2817 |
| BmrI | ACTGGG | 1 cut(s) | 972 |
| BmuI | ACTGGG | 1 cut(s) | 972 |
| BpiI | GAAGAC | 2 cut(s) | 1055, 2902 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1037, 1069 |
| BpmI | CTGGAG | 4 cut(s) | 995, 1424, 2436, 2799 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2025, 2910 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2868 |
| Bsa29I | ATCGAT | 1 cut(s) | 1575 |
| BsaAI | YACGTR | 2 cut(s) | 506, 2306 |
| BsaBI | GATNNNNATC | 2 cut(s) | 825, 1758 |
| BsaHI | GRCGYC | 1 cut(s) | 1615 |
| BsaJI | CCNNGG | 8 cut(s) | 43, 294, 451, 1653, 1870, 2331, 2634, 2816 |
| BsaWI | WCCGGW | 2 cut(s) | 1330, 2148 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 311, 457, 836, 1000, 1888, 2922 |
| Bse118I | RCCGGY | 3 cut(s) | 137, 2148, 2915 |
| Bse1I | ACTGG | 8 cut(s) | 610, 774, 790, 967, 1231, 1407, 1763, 2112 |
| Bse3DI | GCAATG | 2 cut(s) | 1290, 2280 |
| Bse8I | GATNNNNATC | 2 cut(s) | 825, 1758 |
| BseAI | TCCGGA | 1 cut(s) | 1330 |
| BseBI | CCWGG | 7 cut(s) | 193, 871, 974, 1872, 2322, 2778, 2817 |
| BseCI | ATCGAT | 1 cut(s) | 1575 |
| BseDI | CCNNGG | 8 cut(s) | 43, 294, 451, 1653, 1870, 2331, 2634, 2816 |
| BseJI | GATNNNNATC | 2 cut(s) | 825, 1758 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 311, 457, 836, 1000, 1888, 2922 |
| BseMI | GCAATG | 2 cut(s) | 1290, 2280 |
| BseMII | CTCAG | 7 cut(s) | 822, 1068, 1637, 2026, 2361, 2922, 2924 |
| BseNI | ACTGG | 8 cut(s) | 610, 774, 790, 967, 1231, 1407, 1763, 2112 |
| BseRI | GAGGAG | 2 cut(s) | 1425, 2570 |
| BsgI | GTGCAG | 3 cut(s) | 774, 1614, 2046 |
| Bsh1236I | CGCG | 1 cut(s) | 1563 |
| BshFI | GGCC | 4 cut(s) | 293, 972, 2860, 2915 |
| BshTI | ACCGGT | 1 cut(s) | 2148 |
| BshVI | ATCGAT | 1 cut(s) | 1575 |
| BsiHKAI | GWGCWC | 2 cut(s) | 224, 1319 |
| BsiSI | CCGG | 5 cut(s) | 138, 1331, 2149, 2750, 2916 |
| BslFI | GGGAC | 1 cut(s) | 2362 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 311, 457, 836, 1000, 1888, 2922 |
| BsmAI | GTCTC | 1 cut(s) | 2987 |
| BsmBI | CGTCTC | 1 cut(s) | 2987 |
| BsmFI | GGGAC | 1 cut(s) | 2362 |
| BsmI | GAATGC | 3 cut(s) | 432, 2807, 2841 |
| BsnI | GGCC | 4 cut(s) | 293, 972, 2860, 2915 |
| Bsp1286I | GDGCHC | 3 cut(s) | 224, 1319, 2771 |
| Bsp13I | TCCGGA | 1 cut(s) | 1330 |
| Bsp1407I | TGTACA | 2 cut(s) | 256, 1393 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2868 |
| Bsp19I | CCATGG | 2 cut(s) | 1653, 2331 |
| BspACI | CCGC | 6 cut(s) | 48, 72, 653, 1563, 2639, 2892 |
| BspANI | GGCC | 4 cut(s) | 293, 972, 2860, 2915 |
| BspCNI | CTCAG | 7 cut(s) | 823, 1067, 1636, 2025, 2362, 2923, 2923 |
| BspDI | ATCGAT | 1 cut(s) | 1575 |
| BspEI | TCCGGA | 1 cut(s) | 1330 |
| BspFNI | CGCG | 1 cut(s) | 1563 |
| BspLI | GGNNCC | 3 cut(s) | 462, 1005, 2319 |
| BspMAI | CTGCAG | 1 cut(s) | 203 |
| BspPI | GGATC | 4 cut(s) | 306, 392, 1434, 2741 |
| BspTI | CTTAAG | 1 cut(s) | 2066 |
| BsrDI | GCAATG | 2 cut(s) | 1290, 2280 |
| BsrFI | RCCGGY | 3 cut(s) | 137, 2148, 2915 |
| BsrGI | TGTACA | 2 cut(s) | 256, 1393 |
| BsrI | ACTGG | 8 cut(s) | 610, 774, 790, 967, 1231, 1407, 1763, 2112 |
| BssAI | RCCGGY | 3 cut(s) | 137, 2148, 2915 |
| BssECI | CCNNGG | 8 cut(s) | 43, 294, 451, 1653, 1870, 2331, 2634, 2816 |
| BssNI | GRCGYC | 1 cut(s) | 1615 |
| BssT1I | CCWWGG | 5 cut(s) | 294, 451, 1653, 2331, 2634 |
| Bst2UI | CCWGG | 7 cut(s) | 193, 871, 974, 1872, 2322, 2778, 2817 |
| Bst4CI | ACNGT | 9 cut(s) | 160, 261, 406, 634, 1637, 1999, 2123, 2165, 2625 |
| Bst6I | CTCTTC | 2 cut(s) | 1359, 2292 |
| BstACI | GRCGYC | 1 cut(s) | 1615 |
| BstAFI | CTTAAG | 1 cut(s) | 2066 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1637 |
| BstAUI | TGTACA | 2 cut(s) | 256, 1393 |
| BstBAI | YACGTR | 2 cut(s) | 506, 2306 |
| BstC8I | GCNNGC | 6 cut(s) | 7, 118, 1134, 2022, 2841, 2998 |
| BstDSI | CCRYGG | 3 cut(s) | 43, 1653, 2331 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 455, 998 |
| BstFNI | CGCG | 1 cut(s) | 1563 |
| BstMAI | GTCTC | 1 cut(s) | 2987 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 39, 45, 488, 1488, 1637, 2258, 2447, 2636 |
| BstNI | CCWGG | 7 cut(s) | 193, 871, 974, 1872, 2322, 2778, 2817 |
| BstSCI | CCNGG | 7 cut(s) | 191, 869, 972, 1870, 2320, 2776, 2815 |
| BstSFI | CTRYAG | 4 cut(s) | 159, 199, 633, 2268 |
| BstSNI | TACGTA | 1 cut(s) | 506 |
| BstUI | CGCG | 1 cut(s) | 1563 |
| BstV2I | GAAGAC | 2 cut(s) | 1055, 2902 |
| BstX2I | RGATCY | 3 cut(s) | 298, 1669, 2746 |
| BstYI | RGATCY | 3 cut(s) | 298, 1669, 2746 |
| Bsu15I | ATCGAT | 1 cut(s) | 1575 |
| BsuI | GTATCC | 1 cut(s) | 2338 |
| BsuRI | GGCC | 4 cut(s) | 293, 972, 2860, 2915 |
| BsuTUI | ATCGAT | 1 cut(s) | 1575 |
| BtgI | CCRYGG | 3 cut(s) | 43, 1653, 2331 |
| BtsI | GCAGTG | 3 cut(s) | 196, 208, 2216 |
| Cac8I | GCNNGC | 6 cut(s) | 7, 118, 1134, 2022, 2841, 2998 |
| CaiI | CAGNNNCTG | 4 cut(s) | 198, 254, 1402, 1694 |
| Cfr10I | RCCGGY | 3 cut(s) | 137, 2148, 2915 |
| Cfr13I | GGNCC | 4 cut(s) | 771, 788, 797, 2858 |
| ClaI | ATCGAT | 1 cut(s) | 1575 |
| CseI | GACGC | 1 cut(s) | 1604 |
| CsiI | ACCWGGT | 1 cut(s) | 869 |
| CspAI | ACCGGT | 1 cut(s) | 2148 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 498, 533, 1447, 1482, 1530, 1565 |
| CviAII | CATG | 9 cut(s) | 618, 710, 801, 1479, 1583, 1654, 1853, 2332, 2354 |
| DraIII | CACNNNGTG | 1 cut(s) | 1637 |
| Eam1104I | CTCTTC | 2 cut(s) | 1359, 2292 |
| EarI | CTCTTC | 2 cut(s) | 1359, 2292 |
| EciI | GGCGGA | 1 cut(s) | 2907 |
| Eco105I | TACGTA | 1 cut(s) | 506 |
| Eco130I | CCWWGG | 5 cut(s) | 294, 451, 1653, 2331, 2634 |
| Eco24I | GRGCYC | 1 cut(s) | 2771 |
| Eco47I | GGWCC | 3 cut(s) | 771, 788, 797 |
| Eco57I | CTGAAG | 6 cut(s) | 32, 559, 980, 1575, 1800, 2541 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 455, 998 |
| EcoRI | GAATTC | 1 cut(s) | 905 |
| EcoRII | CCWGG | 7 cut(s) | 191, 869, 972, 1870, 2320, 2776, 2815 |
| EcoT14I | CCWWGG | 5 cut(s) | 294, 451, 1653, 2331, 2634 |
| EcoT22I | ATGCAT | 2 cut(s) | 1501, 1584 |
| EcoT38I | GRGCYC | 1 cut(s) | 2771 |
| ErhI | CCWWGG | 5 cut(s) | 294, 451, 1653, 2331, 2634 |
| Esp3I | CGTCTC | 1 cut(s) | 2987 |
| FaeI | CATG | 9 cut(s) | 621, 713, 804, 1482, 1586, 1657, 1856, 2335, 2357 |
| FaqI | GGGAC | 1 cut(s) | 2362 |
| FatI | CATG | 9 cut(s) | 617, 709, 800, 1478, 1582, 1653, 1852, 2331, 2353 |
| FauI | CCCGC | 2 cut(s) | 41, 79 |
| FauNDI | CATATG | 1 cut(s) | 1519 |
| FblI | GTMKAC | 2 cut(s) | 108, 2541 |
| FriOI | GRGCYC | 1 cut(s) | 2771 |
| FspBI | CTAG | 7 cut(s) | 237, 278, 1082, 1436, 1970, 2586, 2672 |
| GsuI | CTGGAG | 4 cut(s) | 995, 1424, 2436, 2799 |
| HaeIII | GGCC | 4 cut(s) | 293, 972, 2860, 2915 |
| HapII | CCGG | 5 cut(s) | 138, 1331, 2149, 2750, 2916 |
| HgaI | GACGC | 1 cut(s) | 1604 |
| Hin1I | GRCGYC | 1 cut(s) | 1615 |
| Hin1II | CATG | 9 cut(s) | 621, 713, 804, 1482, 1586, 1657, 1856, 2335, 2357 |
| HincII | GTYRAC | 1 cut(s) | 96 |
| HindII | GTYRAC | 1 cut(s) | 96 |
| HindIII | AAGCTT | 2 cut(s) | 693, 2448 |
| HinfI | GANTC | 9 cut(s) | 317, 367, 990, 1759, 1829, 2010, 2350, 2678, 2702 |
| HpaII | CCGG | 5 cut(s) | 138, 1331, 2149, 2750, 2916 |
| HphI | GGTGA | 5 cut(s) | 1886, 2294, 2306, 2456, 2792 |
| Hpy166II | GTNNAC | 6 cut(s) | 96, 109, 1942, 2105, 2542, 2611 |
| Hpy8I | GTNNAC | 6 cut(s) | 96, 109, 1942, 2105, 2542, 2611 |
| Hpy99I | CGWCG | 2 cut(s) | 333, 1203 |
| HpyAV | CCTTC | 9 cut(s) | 198, 315, 592, 994, 1004, 1206, 1265, 1775, 2782 |
| HpyCH4III | ACNGT | 9 cut(s) | 160, 261, 406, 634, 1637, 1999, 2123, 2165, 2625 |
| HpyCH4IV | ACGT | 5 cut(s) | 355, 505, 1911, 2305, 2980 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 39, 45, 488, 1488, 1637, 2258, 2447, 2636 |
| HpySE526I | ACGT | 5 cut(s) | 355, 505, 1911, 2305, 2980 |
| Hsp92I | GRCGYC | 1 cut(s) | 1615 |
| Hsp92II | CATG | 9 cut(s) | 621, 713, 804, 1482, 1586, 1657, 1856, 2335, 2357 |
| Kpn2I | TCCGGA | 1 cut(s) | 1330 |
| LmnI | GCTCC | 5 cut(s) | 21, 219, 779, 976, 1274 |
| MabI | ACCWGGT | 1 cut(s) | 869 |
| MaeI | CTAG | 7 cut(s) | 237, 278, 1082, 1436, 1970, 2586, 2672 |
| MaeII | ACGT | 5 cut(s) | 355, 505, 1911, 2305, 2980 |
| MaeIII | GTNAC | 3 cut(s) | 1928, 2527, 2559 |
| MfeI | CAATTG | 1 cut(s) | 1137 |
| MflI | RGATCY | 3 cut(s) | 298, 1669, 2746 |
| MhlI | GDGCHC | 3 cut(s) | 224, 1319, 2771 |
| MlyI | GAGTC | 2 cut(s) | 2004, 2344 |
| Mph1103I | ATGCAT | 2 cut(s) | 1501, 1584 |
| MroI | TCCGGA | 1 cut(s) | 1330 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1663 |
| MseI | TTAA | 8 cut(s) | 29, 438, 941, 1326, 1451, 1644, 2067, 2193 |
| MslI | CAYNNNNRTG | 2 cut(s) | 201, 1131 |
| MspA1I | CMGCKG | 4 cut(s) | 653, 2494, 2720, 2756 |
| MspCI | CTTAAG | 1 cut(s) | 2066 |
| MspI | CCGG | 5 cut(s) | 138, 1331, 2149, 2750, 2916 |
| MspR9I | CCNGG | 7 cut(s) | 193, 871, 974, 1872, 2322, 2778, 2817 |
| MunI | CAATTG | 1 cut(s) | 1137 |
| Mva1269I | GAATGC | 3 cut(s) | 432, 2807, 2841 |
| MvaI | CCWGG | 7 cut(s) | 193, 871, 974, 1872, 2322, 2778, 2817 |
| MvnI | CGCG | 1 cut(s) | 1563 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 39, 45, 488, 1488, 1637, 2258, 2447, 2636 |
| NcoI | CCATGG | 2 cut(s) | 1653, 2331 |
| NdeI | CATATG | 1 cut(s) | 1519 |
| NlaIII | CATG | 9 cut(s) | 621, 713, 804, 1482, 1586, 1657, 1856, 2335, 2357 |
| NlaIV | GGNNCC | 3 cut(s) | 462, 1005, 2319 |
| NsiI | ATGCAT | 2 cut(s) | 1501, 1584 |
| OliI | CACNNNNGTG | 1 cut(s) | 201 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 538 |
| PctI | GAATGC | 3 cut(s) | 432, 2807, 2841 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1663 |
| PfeI | GAWTC | 7 cut(s) | 317, 367, 990, 1759, 1829, 2678, 2702 |
| PinAI | ACCGGT | 1 cut(s) | 2148 |
| PleI | GAGTC | 2 cut(s) | 2004, 2344 |
| PpsI | GAGTC | 2 cut(s) | 2004, 2344 |
| Ppu21I | YACGTR | 2 cut(s) | 506, 2306 |
| PshBI | ATTAAT | 1 cut(s) | 1326 |
| Psp6I | CCWGG | 7 cut(s) | 191, 869, 972, 1870, 2320, 2776, 2815 |
| PspGI | CCWGG | 7 cut(s) | 191, 869, 972, 1870, 2320, 2776, 2815 |
| PspN4I | GGNNCC | 3 cut(s) | 462, 1005, 2319 |
| PspPI | GGNCC | 4 cut(s) | 771, 788, 797, 2858 |
| PstI | CTGCAG | 1 cut(s) | 203 |
| PstNI | CAGNNNCTG | 4 cut(s) | 198, 254, 1402, 1694 |
| PsuI | RGATCY | 3 cut(s) | 298, 1669, 2746 |
| PvuII | CAGCTG | 3 cut(s) | 2494, 2720, 2756 |
| RseI | CAYNNNNRTG | 2 cut(s) | 201, 1131 |
| SaqAI | TTAA | 8 cut(s) | 29, 438, 941, 1326, 1451, 1644, 2067, 2193 |
| Sau96I | GGNCC | 4 cut(s) | 771, 788, 797, 2858 |
| SchI | GAGTC | 2 cut(s) | 2004, 2344 |
| ScrFI | CCNGG | 7 cut(s) | 193, 871, 974, 1872, 2322, 2778, 2817 |
| SduI | GDGCHC | 3 cut(s) | 224, 1319, 2771 |
| SexAI | ACCWGGT | 1 cut(s) | 869 |
| SfcI | CTRYAG | 4 cut(s) | 159, 199, 633, 2268 |
| SinI | GGWCC | 3 cut(s) | 771, 788, 797 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 201, 1131 |
| SmlI | CTYRAG | 1 cut(s) | 2066 |
| SmoI | CTYRAG | 1 cut(s) | 2066 |
| SnaBI | TACGTA | 1 cut(s) | 506 |
| SpeI | ACTAGT | 2 cut(s) | 277, 2671 |
| SsiI | CCGC | 6 cut(s) | 48, 72, 653, 1563, 2639, 2892 |
| SspI | AATATT | 1 cut(s) | 1177 |
| SspMI | CTAG | 7 cut(s) | 237, 278, 1082, 1436, 1970, 2586, 2672 |
| StyD4I | CCNGG | 7 cut(s) | 191, 869, 972, 1870, 2320, 2776, 2815 |
| StyI | CCWWGG | 5 cut(s) | 294, 451, 1653, 2331, 2634 |
| TaaI | ACNGT | 9 cut(s) | 160, 261, 406, 634, 1637, 1999, 2123, 2165, 2625 |
| TaiI | ACGT | 5 cut(s) | 358, 508, 1914, 2308, 2983 |
| TaqI | TCGA | 9 cut(s) | 77, 308, 331, 532, 988, 1198, 1533, 1575, 2962 |
| TatI | WGTACW | 3 cut(s) | 242, 256, 1393 |
| TfiI | GAWTC | 7 cut(s) | 317, 367, 990, 1759, 1829, 2678, 2702 |
| Tru1I | TTAA | 8 cut(s) | 29, 438, 941, 1326, 1451, 1644, 2067, 2193 |
| Tru9I | TTAA | 8 cut(s) | 29, 438, 941, 1326, 1451, 1644, 2067, 2193 |
| TspDTI | ATGAA | 5 cut(s) | 288, 705, 1032, 2501, 2592 |
| TspGWI | ACGGA | 1 cut(s) | 284 |
| Vha464I | CTTAAG | 1 cut(s) | 2066 |
| VpaK11BI | GGWCC | 3 cut(s) | 771, 788, 797 |
| VspI | ATTAAT | 1 cut(s) | 1326 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 455, 998 |
| XapI | RAATTY | 5 cut(s) | 905, 1388, 1697, 2653, 2935 |
| XbaI | TCTAGA | 1 cut(s) | 1969 |
| XmiI | GTMKAC | 2 cut(s) | 108, 2541 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1663 |
| XspI | CTAG | 7 cut(s) | 237, 278, 1082, 1436, 1970, 2586, 2672 |
| Zsp2I | ATGCAT | 2 cut(s) | 1501, 1584 |