Rorug06G0230400

glutaredoxin-C11-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
37126186 .. 37126771
586 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0230400.1

Sequence Viewer

Length: 321 bp
ATGGCTACTGCTTCTGTAGATACAATTGGTGTTCCAAGGGAATGCATACTGTTGAGAAATATGTTCGATCCCAAAGAAATTGAGCAGGCTGAACCAGATATTGACGTGGACATTAAAGAAGATGTTCAGGAGGAATGTTCAAAATGCGGGAAGCTGAAACATATATTTGTTGACAAGAATACCGCTGGTTTTGTGTACTTGAGATTTGAGAACACACAAGTTGCAATACATGCTCGACAAGTTCTCCATGGAAGATGGTTTGCTGGGAAGATGATCACAGCCACTTTCATAGTAATTACATGTTATCACGGCTGTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

106

Amino Acids

12.03

Weight (kDa)

5.75

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010825)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 147, 183
AclWI GGATC 1 cut(s) 62
AfaI GTAC 1 cut(s) 197
AflIII ACRYGT 1 cut(s) 299
AgsI TTSAA 1 cut(s) 141
AjiI CACGTC 1 cut(s) 106
AluBI AGCT 1 cut(s) 154
AluI AGCT 1 cut(s) 154
AlwI GGATC 1 cut(s) 62
Asp700I GAANNNNTTC 1 cut(s) 123
BccI CCATC 1 cut(s) 249
BclI TGATCA 1 cut(s) 273
BfmI CTRYAG 1 cut(s) 15
BmgBI CACGTC 1 cut(s) 106
BpuEI CTTGAG 1 cut(s) 220
BsaJI CCNNGG 2 cut(s) 35, 247
BsaXI ACNNNNNCTCC 2 cut(s) 228, 258
BseDI CCNNGG 2 cut(s) 35, 247
BseYI CCCAGC 1 cut(s) 263
BsmI GAATGC 1 cut(s) 47
Bsp143I GATC 2 cut(s) 67, 273
Bsp19I CCATGG 1 cut(s) 247
BspACI CCGC 2 cut(s) 147, 183
BspPI GGATC 1 cut(s) 62
BssECI CCNNGG 2 cut(s) 35, 247
BssMI GATC 2 cut(s) 67, 273
BssT1I CCWWGG 2 cut(s) 35, 247
Bst4CI ACNGT 1 cut(s) 51
BstAPI GCANNNNNTGC 1 cut(s) 230
BstC8I GCNNGC 1 cut(s) 87
BstDSI CCRYGG 1 cut(s) 247
BstKTI GATC 2 cut(s) 70, 276
BstMBI GATC 2 cut(s) 67, 273
BstMWI GCNNNNNNNGC 1 cut(s) 230
BstNSI RCATGY 2 cut(s) 233, 303
BstSFI CTRYAG 1 cut(s) 15
BtgI CCRYGG 1 cut(s) 247
BtrI CACGTC 1 cut(s) 106
Cac8I GCNNGC 1 cut(s) 87
Csp6I GTAC 1 cut(s) 196
CviAII CATG 3 cut(s) 230, 248, 300
CviJI RGCY 5 cut(s) 5, 89, 154, 281, 312
CviKI_1 RGCY 5 cut(s) 5, 89, 154, 281, 312
CviQI GTAC 1 cut(s) 196
DpnI GATC 2 cut(s) 69, 275
DpnII GATC 2 cut(s) 67, 273
Eco130I CCWWGG 2 cut(s) 35, 247
EcoT14I CCWWGG 2 cut(s) 35, 247
EcoT22I ATGCAT 1 cut(s) 47
ErhI CCWWGG 2 cut(s) 35, 247
FaeI CATG 3 cut(s) 233, 251, 303
FaiI YATR 9 cut(s) 47, 62, 162, 164, 231, 249, 290, 301, 319
FatI CATG 3 cut(s) 229, 247, 299
FauI CCCGC 1 cut(s) 140
FbaI TGATCA 1 cut(s) 273
GsaI CCCAGC 1 cut(s) 267
Hin1II CATG 3 cut(s) 233, 251, 303
HincII GTYRAC 1 cut(s) 172
HindII GTYRAC 1 cut(s) 172
Hpy166II GTNNAC 3 cut(s) 109, 172, 196
Hpy188III TCNNGA 1 cut(s) 128
Hpy8I GTNNAC 3 cut(s) 109, 172, 196
HpyCH4III ACNGT 1 cut(s) 51
HpyCH4IV ACGT 1 cut(s) 105
HpyCH4V TGCA 2 cut(s) 45, 224
HpyF10VI GCNNNNNNNGC 1 cut(s) 230
HpySE526I ACGT 1 cut(s) 105
Hsp92II CATG 3 cut(s) 233, 251, 303
Ksp22I TGATCA 1 cut(s) 273
Kzo9I GATC 2 cut(s) 67, 273
LpnPI CCDG 5 cut(s) 71, 108, 113, 171, 249
MaeII ACGT 1 cut(s) 105
MalI GATC 2 cut(s) 69, 275
MboI GATC 2 cut(s) 67, 273
MboII GAAGA 3 cut(s) 131, 264, 280
MfeI CAATTG 1 cut(s) 24
MluCI AATT 3 cut(s) 24, 78, 294
MnlI CCTC 1 cut(s) 124
Mph1103I ATGCAT 1 cut(s) 47
MroXI GAANNNNTTC 1 cut(s) 123
MseI TTAA 1 cut(s) 114
MspA1I CMGCKG 1 cut(s) 185
MunI CAATTG 1 cut(s) 24
Mva1269I GAATGC 1 cut(s) 47
MwoI GCNNNNNNNGC 1 cut(s) 230
NcoI CCATGG 1 cut(s) 247
NdeII GATC 2 cut(s) 67, 273
NlaIII CATG 3 cut(s) 233, 251, 303
NsiI ATGCAT 1 cut(s) 47
NspI RCATGY 2 cut(s) 233, 303
PciI ACATGT 1 cut(s) 299
PctI GAATGC 1 cut(s) 47
PdmI GAANNNNTTC 1 cut(s) 123
PscI ACATGT 1 cut(s) 299
PspFI CCCAGC 1 cut(s) 263
RsaI GTAC 1 cut(s) 197
RsaNI GTAC 1 cut(s) 196
SaqAI TTAA 1 cut(s) 114
Sau3AI GATC 2 cut(s) 67, 273
SetI ASST 2 cut(s) 108, 156
SfcI CTRYAG 1 cut(s) 15
SmlI CTYRAG 1 cut(s) 199
SmoI CTYRAG 1 cut(s) 199
Sse9I AATT 3 cut(s) 24, 78, 294
SsiI CCGC 2 cut(s) 147, 183
StyI CCWWGG 2 cut(s) 35, 247
TaaI ACNGT 1 cut(s) 51
TaiI ACGT 1 cut(s) 108
TaqI TCGA 2 cut(s) 66, 235
TasI AATT 3 cut(s) 24, 78, 294
TatI WGTACW 1 cut(s) 195
Tru1I TTAA 1 cut(s) 114
Tru9I TTAA 1 cut(s) 114
TspDTI ATGAA 1 cut(s) 277
XceI RCATGY 2 cut(s) 233, 303
XmnI GAANNNNTTC 1 cut(s) 123
Zsp2I ATGCAT 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.