Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0016267

Physical Location & Seq

Genomic Coordinates Forward (+)

40618869 .. 40623668

Gene Structure 4800 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0258700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGGATGGATCGTATGAATCTTCAATGTGTAATGGAAGTGACTGTAATGAAATGCAATATAAGGGAGTTCGGTATGATAAGTTGTCTACAGAAGATCTTAAAGGGCAGGAGTTTAATACTGTGGAGGAAGCTGAGTCCTTTTACAATGCTTATGCAAAGGCCATGGGTTTTGATGTTAGAAACGACTACAAGAGATTAAGTATACGCACAACAGGGAGAGTCACTTCATTGCGATTATTCAAGCAGAATAAAGCAAAGTACATATTTGGATGTGTGTTGTTCTTCCAACTATATTATTATAATGTCATCGGATATGGAAGGGCACTTGTTGATTGTGAGAAGCCTTCAATTGCAGCTTGGGGAGAGGAGCAATCAGCAAAATTAATTAAATGGATATTGCGGAAAGGGGGTCATGAAAGTGCAAACATTCTGGTTTCCAAAGTTTATAATTCAAGTGAACAGAAACATGAGGCAGAAAATGTTGTTGCCCTTCGAGCTGATGTTGAATCTGTGAAGAGTACCATTATGCGTATGGATGAAAAGATTGATGAATTGGGAGGTCTTCTTAGAGGGATACAAGAAGGATTGTTCAAAGTAGTGAGACAAGATGGTGATCAGGATGTCAATATAAAAAGGGACGAGGCTAATCATGAAAGAAAGACTGTGGATCTGTCAGCAAATGATACTATTAGGCAAAACCATCAAGAAAGTGATGATTTCAAAACTCAAAGTTCAAAAGAAGTTGAGGTTAATGACGAATCATCATGTCAAATACAAAGTGAGGACAACTCTGAGGCAGCACATCCTAAGATTAAGGAAGAATTTATCATAGGCAAAACAATCAGGACGGACACTAAATCAACTAAATTCAGTCCGATCAATACGCGGCGCACCGCTGAAAGGAAGCCAAGTCAAGCAATATCATATCCATTTGTGAAGCTTGGGTTCGAATTAGATGATGAGCAAATTGACGAATATTTGCATTGGAGAACCCTAAATTTGAAGAGAATTGGTGAATTCAAGGGTCCTTTCGATTTTGACGATGATGATTGTGATTTGCTGAGTTTTATATACGAAAAATATAAAAAGGACTTTAGGGTTTTCCAAACAGATGATAACTTCCTAAACCGTGCTGATATGAGATGCTTAGAGCCTGGTCAATATGTCAGCAACGAGTTGGTAAGTGCTGTAATTGGAATTCTTCGGAAACCTGGAGTTGCTTCTCAATGGTTTTTTAGTGCATATTTTTCGGCCAAAGCACTTTCTAAAAAAGAAGGTCAAGATTTGTCAAAATTTGCTGCCAACGCGAAAAAAGAAAATAAGGCTGAGTTCCGATACTTTGTATTTGAGAAATGCGAAAAGATTTTTGTTCCCATCCTGGATGATGGTGTAAAAGGGAACCACTGGTTCCTCATGGTAGTAAAAATAAGAAGCAAGGAAGTTGAGATATTGGATAGTTTTCCTAGTTCCGCACGCAAGACTCCACGAGAGAATCTAGCTTATCATTTGCTGAAGACACTGGACATGATATTTGATAACGAGATTAGGATTCATTTCGATGAAGGATGCACATTCTTTTCATTTAAAATTATTCATCCCAATTGTGTTCCAGTACAAAGAAATGGATTTGATTGTGGCATTTTTATGATTAAATTCATGGAGGATTATGAGAATGCATCCAAAGCAGGGGACAAGTATCATTCTGTGAACGAGCGTTTGCGCATAGCTCTCACCTTGTTGAAGCATCCGGATAACCAAGCACGCAACAATATTGCTGAAGCTAGACAAAGGTCACTTCAAAAAGTTATATGCAAGAAACGTGGATCAAACACAATGAAGACAGATCAAGACTGCACAACACGCAGCGATACCGATGAAGGTTCGCAAAGGTCTCCAAAGAAAATGAAGGCAATCCAAGAAATAGATGCAACCAACATGAACAAGAAAATGGGTCCTGGTCGGCCTCGTGGCTCAAAGAATAAACCTAAGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009909 GO:0009910 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0060089 GO:0060860 GO:0060862 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

664

Amino Acids

76.42

Weight (kDa)

8.33

Isoelectric Point (pI)

37.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C48	PF02902	422 - 554	9.5e-18	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0016267)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g27320
rosa_chinensis	RchiOBHm_Chr6g0296131 RchiOBHm_Chr6g0296141
rosa_laevigata	RLG00000011724
rosa_multiflora	Rmu_co8158884.1_g000001 Rmu_sc0000486.1_g000005 Rmu_sc0003139.1_g000049
rosa_roxburghii	Rroxscaffold_7G00171800 Rroxscaffold_7G00178250
rosa_rugosa	Rorug06G0258700
rosa_samantha	Rh6AG371000 Rh6BG378900 Rh6CG384200 Rh6DG371400
rosa_wichuraiana	Rw6G032320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	300, 447
Acc16I	TGCGCA	1 cut(s)	1721
AccI	GTMKAC	2 cut(s)	86, 202
AccII	CGCG	2 cut(s)	886, 1307
AccIII	TCCGGA	1 cut(s)	1747
AciI	CCGC	4 cut(s)	400, 886, 894, 1470
AclWI	GGATC	3 cut(s)	16, 675, 1831
AcoI	YGGCCR	1 cut(s)	1251
AcsI	RAATTY	7 cut(s)	821, 866, 997, 1016, 1197, 1292, 1652
AcuI	CTGAAG	2 cut(s)	1532, 1797
AfaI	GTAC	3 cut(s)	260, 520, 1614
AfiI	CCNNNNNNNGG	2 cut(s)	900, 1686
AjnI	CCWGG	4 cut(s)	1153, 1210, 1377, 1954
AluBI	AGCT	7 cut(s)	131, 356, 497, 940, 1499, 1727, 1781
AluI	AGCT	7 cut(s)	131, 356, 497, 940, 1499, 1727, 1781
Alw26I	GTCTC	2 cut(s)	595, 1896
AlwI	GGATC	3 cut(s)	16, 675, 1831
Aor13HI	TCCGGA	1 cut(s)	1747
AoxI	GGCC	3 cut(s)	159, 1251, 1961
ApeKI	GCWGC	4 cut(s)	353, 797, 1298, 1863
ApoI	RAATTY	7 cut(s)	821, 866, 997, 1016, 1197, 1292, 1652
ArsI	GACNNNNNNTTYG	2 cut(s)	1514, 1546
AseI	ATTAAT	1 cut(s)	383
AspLEI	GCGC	2 cut(s)	891, 1722
AspS9I	GGNCC	2 cut(s)	1025, 1952
AsuHPI	GGTGA	3 cut(s)	623, 1025, 1723
AsuII	TTCGAA	1 cut(s)	948
AvaII	GGWCC	2 cut(s)	1025, 1952
BaeGI	GKGCMC	1 cut(s)	325
BauI	CACGAG	2 cut(s)	1485, 1965
BbsI	GAAGAC	3 cut(s)	554, 1520, 1844
BbvI	GCAGC	4 cut(s)	365, 809, 1285, 1875
BccI	CCATC	4 cut(s)	602, 708, 1379, 1382
BcgI	CGANNNNNNTGC	2 cut(s)	1230, 1264
BciT130I	CCWGG	4 cut(s)	1155, 1212, 1379, 1956
BciVI	GTATCC	1 cut(s)	567
BclI	TGATCA	1 cut(s)	613
BcoDI	GTCTC	2 cut(s)	595, 1896
BfaI	CTAG	3 cut(s)	1464, 1496, 1782
BfmI	CTRYAG	1 cut(s)	87
BfuI	GTATCC	1 cut(s)	567
BglII	AGATCT	1 cut(s)	94
BisI	GCNGC	5 cut(s)	354, 798, 887, 1299, 1864
BlsI	GCNGC	5 cut(s)	355, 799, 888, 1300, 1865
Bme1390I	CCNGG	4 cut(s)	1155, 1212, 1379, 1956
Bme18I	GGWCC	2 cut(s)	1025, 1952
BmgT120I	GGNCC	2 cut(s)	1025, 1952
BmiI	GGNNCC	4 cut(s)	1026, 1400, 1409, 1953
BmrFI	CCNGG	4 cut(s)	1155, 1212, 1379, 1956
BmsI	GCATC	5 cut(s)	1133, 1556, 1685, 1753, 1915
BoxI	GACNNNNGTC	1 cut(s)	1789
BpiI	GAAGAC	3 cut(s)	554, 1520, 1844
BplI	GAGNNNNNCTC	2 cut(s)	773, 805
BpmI	CTGGAG	1 cut(s)	1233
Bpu14I	TTCGAA	1 cut(s)	948
BsaBI	GATNNNNATC	1 cut(s)	612
BsaI	GGTCTC	1 cut(s)	1896
BsaJI	CCNNGG	1 cut(s)	162
BsaWI	WCCGGW	1 cut(s)	1747
Bsc4I	CCNNNNNNNGG	2 cut(s)	900, 1686
Bse1I	ACTGG	3 cut(s)	1409, 1524, 1610
Bse3DI	GCAATG	1 cut(s)	227
Bse8I	GATNNNNATC	1 cut(s)	612
BseAI	TCCGGA	1 cut(s)	1747
BseBI	CCWGG	4 cut(s)	1155, 1212, 1379, 1956
BseDI	CCNNGG	1 cut(s)	162
BseJI	GATNNNNATC	1 cut(s)	612
BseLI	CCNNNNNNNGG	2 cut(s)	900, 1686
BseMI	GCAATG	1 cut(s)	227
BseMII	CTCAG	4 cut(s)	123, 783, 1052, 1317
BseNI	ACTGG	3 cut(s)	1409, 1524, 1610
BseRI	GAGGAG	1 cut(s)	380
BseSI	GKGCMC	1 cut(s)	325
BseXI	GCAGC	4 cut(s)	365, 809, 1285, 1875
BsgI	GTGCAG	1 cut(s)	1837
Bsh1236I	CGCG	2 cut(s)	886, 1307
BshFI	GGCC	3 cut(s)	161, 1253, 1963
BsiSI	CCGG	1 cut(s)	1748
BslFI	GGGAC	2 cut(s)	650, 1703
BslI	CCNNNNNNNGG	2 cut(s)	900, 1686
BsmAI	GTCTC	2 cut(s)	595, 1896
BsmFI	GGGAC	2 cut(s)	650, 1703
BsmI	GAATGC	1 cut(s)	1678
BsnI	GGCC	3 cut(s)	161, 1253, 1963
Bso31I	GGTCTC	1 cut(s)	1896
Bsp119I	TTCGAA	1 cut(s)	948
Bsp1286I	GDGCHC	1 cut(s)	325
Bsp13I	TCCGGA	1 cut(s)	1747
Bsp143I	GATC	7 cut(s)	8, 94, 613, 667, 876, 1823, 1843
Bsp19I	CCATGG	1 cut(s)	162
BspACI	CCGC	4 cut(s)	400, 886, 894, 1470
BspANI	GGCC	3 cut(s)	161, 1253, 1963
BspCNI	CTCAG	4 cut(s)	124, 784, 1053, 1318
BspEI	TCCGGA	1 cut(s)	1747
BspFNI	CGCG	2 cut(s)	886, 1307
BspHI	TCATGA	2 cut(s)	412, 649
BspLI	GGNNCC	4 cut(s)	1026, 1400, 1409, 1953
BspPI	GGATC	3 cut(s)	16, 675, 1831
BspT104I	TTCGAA	1 cut(s)	948
BspTNI	GGTCTC	1 cut(s)	1896
BsrDI	GCAATG	1 cut(s)	227
BsrI	ACTGG	3 cut(s)	1409, 1524, 1610
BssECI	CCNNGG	1 cut(s)	162
BssMI	GATC	7 cut(s)	8, 94, 613, 667, 876, 1823, 1843
BssNAI	GTATAC	1 cut(s)	203
BssSI	CACGAG	2 cut(s)	1485, 1965
BssT1I	CCWWGG	1 cut(s)	162
Bst1107I	GTATAC	1 cut(s)	203
Bst2BI	CACGAG	2 cut(s)	1485, 1965
Bst2UI	CCWGG	4 cut(s)	1155, 1212, 1379, 1956
Bst4CI	ACNGT	4 cut(s)	44, 121, 664, 1130
Bst6I	CTCTTC	2 cut(s)	509, 998
BstBI	TTCGAA	1 cut(s)	948
BstC8I	GCNNGC	2 cut(s)	1474, 1762
BstDEI	CTNAG	8 cut(s)	132, 566, 792, 807, 1061, 1147, 1326, 1986
BstDSI	CCRYGG	1 cut(s)	162
BstFNI	CGCG	2 cut(s)	886, 1307
BstHHI	GCGC	2 cut(s)	891, 1722
BstKTI	GATC	7 cut(s)	11, 97, 616, 670, 879, 1826, 1846
BstMAI	GTCTC	2 cut(s)	595, 1896
BstMBI	GATC	7 cut(s)	8, 94, 613, 667, 876, 1823, 1843
BstMWI	GCNNNNNNNGC	4 cut(s)	494, 1304, 1682, 1860
BstNI	CCWGG	4 cut(s)	1155, 1212, 1379, 1956
BstPAI	GACNNNNGTC	1 cut(s)	1789
BstSCI	CCNGG	4 cut(s)	1153, 1210, 1377, 1954
BstSFI	CTRYAG	1 cut(s)	87
BstSLI	GKGCMC	1 cut(s)	325
BstUI	CGCG	2 cut(s)	886, 1307
BstV1I	GCAGC	4 cut(s)	365, 809, 1285, 1875
BstV2I	GAAGAC	3 cut(s)	554, 1520, 1844
BstX2I	RGATCY	2 cut(s)	94, 667
BstYI	RGATCY	2 cut(s)	94, 667
BstZ17I	GTATAC	1 cut(s)	203
BsuI	GTATCC	1 cut(s)	567
BsuRI	GGCC	3 cut(s)	161, 1253, 1963
BtgI	CCRYGG	1 cut(s)	162
BtsIMutI	CAGTG	2 cut(s)	1402, 1517
Cac8I	GCNNGC	2 cut(s)	1474, 1762
CciI	TCATGA	2 cut(s)	412, 649
CfoI	GCGC	2 cut(s)	891, 1722
Cfr13I	GGNCC	2 cut(s)	1025, 1952
Csp6I	GTAC	3 cut(s)	259, 519, 1613
CspCI	CAANNNNNGTGG	2 cut(s)	1801, 1836
CviAII	CATG	9 cut(s)	163, 413, 467, 650, 765, 1414, 1525, 1657, 1936
CviQI	GTAC	3 cut(s)	259, 519, 1613
DdeI	CTNAG	8 cut(s)	132, 566, 792, 807, 1061, 1147, 1326, 1986
DpnI	GATC	7 cut(s)	10, 96, 615, 669, 878, 1825, 1845
DpnII	GATC	7 cut(s)	8, 94, 613, 667, 876, 1823, 1843
DraI	TTTAAA	1 cut(s)	1585
EaeI	YGGCCR	1 cut(s)	1251
Eam1104I	CTCTTC	2 cut(s)	509, 998
EarI	CTCTTC	2 cut(s)	509, 998
Eco130I	CCWWGG	1 cut(s)	162
Eco31I	GGTCTC	1 cut(s)	1896
Eco47I	GGWCC	2 cut(s)	1025, 1952
Eco57I	CTGAAG	2 cut(s)	1532, 1797
EcoO109I	RGGNCCY	2 cut(s)	1025, 1952
EcoRI	GAATTC	2 cut(s)	1016, 1197
EcoRII	CCWGG	4 cut(s)	1153, 1210, 1377, 1954
EcoT14I	CCWWGG	1 cut(s)	162
EcoT22I	ATGCAT	1 cut(s)	1678
ErhI	CCWWGG	1 cut(s)	162
FaeI	CATG	9 cut(s)	166, 416, 470, 653, 768, 1417, 1528, 1660, 1939
FaqI	GGGAC	2 cut(s)	650, 1703
FatI	CATG	9 cut(s)	162, 412, 466, 649, 764, 1413, 1524, 1656, 1935
FbaI	TGATCA	1 cut(s)	613
FblI	GTMKAC	2 cut(s)	86, 202
Fnu4HI	GCNGC	5 cut(s)	354, 798, 887, 1299, 1864
Fsp4HI	GCNGC	5 cut(s)	354, 798, 887, 1299, 1864
FspBI	CTAG	3 cut(s)	1464, 1496, 1782
FspI	TGCGCA	1 cut(s)	1721
GlaI	GCGC	2 cut(s)	890, 1721
GluI	GCNGC	5 cut(s)	354, 798, 887, 1299, 1864
GsuI	CTGGAG	1 cut(s)	1233
HaeIII	GGCC	3 cut(s)	161, 1253, 1963
HapII	CCGG	1 cut(s)	1748
HhaI	GCGC	2 cut(s)	891, 1722
Hin1II	CATG	9 cut(s)	166, 416, 470, 653, 768, 1417, 1528, 1660, 1939
Hin6I	GCGC	2 cut(s)	889, 1720
HinP1I	GCGC	2 cut(s)	889, 1720
HindIII	AAGCTT	1 cut(s)	938
HinfI	GANTC	8 cut(s)	17, 134, 219, 506, 758, 1480, 1492, 1549
HpaII	CCGG	1 cut(s)	1748
HphI	GGTGA	3 cut(s)	623, 1025, 1723
Hpy166II	GTNNAC	4 cut(s)	87, 203, 458, 1708
Hpy188I	TCNGA	5 cut(s)	311, 793, 876, 1206, 1334
Hpy188III	TCNNGA	8 cut(s)	413, 617, 650, 704, 844, 1280, 1748, 1847
Hpy8I	GTNNAC	4 cut(s)	87, 203, 458, 1708
HpyAV	CCTTC	8 cut(s)	312, 354, 500, 575, 1268, 1556, 1871, 1900
HpyCH4III	ACNGT	4 cut(s)	44, 121, 664, 1130
HpyCH4IV	ACGT	1 cut(s)	1819
HpyF10VI	GCNNNNNNNGC	4 cut(s)	494, 1304, 1682, 1860
HpyF3I	CTNAG	8 cut(s)	132, 566, 792, 807, 1061, 1147, 1326, 1986
HpySE526I	ACGT	1 cut(s)	1819
Hsp92II	CATG	9 cut(s)	166, 416, 470, 653, 768, 1417, 1528, 1660, 1939
HspAI	GCGC	2 cut(s)	889, 1720
Kpn2I	TCCGGA	1 cut(s)	1747
Ksp22I	TGATCA	1 cut(s)	613
Kzo9I	GATC	7 cut(s)	8, 94, 613, 667, 876, 1823, 1843
LmnI	GCTCC	1 cut(s)	367
Lsp1109I	GCAGC	4 cut(s)	365, 809, 1285, 1875
LweI	GCATC	5 cut(s)	1133, 1556, 1685, 1753, 1915
MaeI	CTAG	3 cut(s)	1464, 1496, 1782
MaeII	ACGT	1 cut(s)	1819
MaeIII	GTNAC	3 cut(s)	38, 220, 1791
MalI	GATC	7 cut(s)	10, 96, 615, 669, 878, 1825, 1845
MboI	GATC	7 cut(s)	8, 94, 613, 667, 876, 1823, 1843
MfeI	CAATTG	2 cut(s)	348, 1600
MflI	RGATCY	2 cut(s)	94, 667
MhlI	GDGCHC	1 cut(s)	325
MlyI	GAGTC	3 cut(s)	143, 228, 1474
MmeI	TCCRAC	1 cut(s)	310
Mph1103I	ATGCAT	1 cut(s)	1678
MroI	TCCGGA	1 cut(s)	1747
MseI	TTAA	9 cut(s)	99, 114, 197, 383, 387, 750, 813, 1584, 1650
MslI	CAYNNNNRTG	3 cut(s)	417, 1557, 1643
MspA1I	CMGCKG	1 cut(s)	896
MspI	CCGG	1 cut(s)	1748
MspR9I	CCNGG	4 cut(s)	1155, 1212, 1379, 1956
MunI	CAATTG	2 cut(s)	348, 1600
Mva1269I	GAATGC	1 cut(s)	1678
MvaI	CCWGG	4 cut(s)	1155, 1212, 1379, 1956
MvnI	CGCG	2 cut(s)	886, 1307
MwoI	GCNNNNNNNGC	4 cut(s)	494, 1304, 1682, 1860
NcoI	CCATGG	1 cut(s)	162
NdeII	GATC	7 cut(s)	8, 94, 613, 667, 876, 1823, 1843
NlaIII	CATG	9 cut(s)	166, 416, 470, 653, 768, 1417, 1528, 1660, 1939
NlaIV	GGNNCC	4 cut(s)	1026, 1400, 1409, 1953
NmuCI	GTSAC	3 cut(s)	38, 220, 1791
NsbI	TGCGCA	1 cut(s)	1721
NsiI	ATGCAT	1 cut(s)	1678
NspV	TTCGAA	1 cut(s)	948
PacI	TTAATTAA	1 cut(s)	387
PagI	TCATGA	2 cut(s)	412, 649
PcsI	WCGNNNNNNNCGW	1 cut(s)	1038
PctI	GAATGC	1 cut(s)	1678
PfeI	GAWTC	5 cut(s)	17, 506, 758, 1492, 1549
PfoI	TCCNGGA	1 cut(s)	1377
PkrI	GCNGC	5 cut(s)	355, 799, 888, 1300, 1865
PleI	GAGTC	3 cut(s)	142, 227, 1474
PpsI	GAGTC	3 cut(s)	142, 227, 1474
PpuMI	RGGWCCY	2 cut(s)	1025, 1952
PshAI	GACNNNNGTC	1 cut(s)	1789
PshBI	ATTAAT	1 cut(s)	383
PsiI	TTATAA	2 cut(s)	300, 447
Psp5II	RGGWCCY	2 cut(s)	1025, 1952
Psp6I	CCWGG	4 cut(s)	1153, 1210, 1377, 1954
PspGI	CCWGG	4 cut(s)	1153, 1210, 1377, 1954
PspN4I	GGNNCC	4 cut(s)	1026, 1400, 1409, 1953
PspPI	GGNCC	2 cut(s)	1025, 1952
PspPPI	RGGWCCY	2 cut(s)	1025, 1952
PsuI	RGATCY	2 cut(s)	94, 667
RsaI	GTAC	3 cut(s)	260, 520, 1614
RsaNI	GTAC	3 cut(s)	259, 519, 1613
RseI	CAYNNNNRTG	3 cut(s)	417, 1557, 1643
SaqAI	TTAA	9 cut(s)	99, 114, 197, 383, 387, 750, 813, 1584, 1650
SatI	GCNGC	5 cut(s)	354, 798, 887, 1299, 1864
Sau3AI	GATC	7 cut(s)	8, 94, 613, 667, 876, 1823, 1843
Sau96I	GGNCC	2 cut(s)	1025, 1952
SchI	GAGTC	3 cut(s)	143, 228, 1474
ScrFI	CCNGG	4 cut(s)	1155, 1212, 1379, 1956
SduI	GDGCHC	1 cut(s)	325
SfaNI	GCATC	5 cut(s)	1133, 1556, 1685, 1753, 1915
SfcI	CTRYAG	1 cut(s)	87
SfuI	TTCGAA	1 cut(s)	948
SinI	GGWCC	2 cut(s)	1025, 1952
SmiMI	CAYNNNNRTG	3 cut(s)	417, 1557, 1643
SsiI	CCGC	4 cut(s)	400, 886, 894, 1470
SspI	AATATT	2 cut(s)	977, 1771
SspMI	CTAG	3 cut(s)	1464, 1496, 1782
StyD4I	CCNGG	4 cut(s)	1153, 1210, 1377, 1954
StyI	CCWWGG	1 cut(s)	162
TaaI	ACNGT	4 cut(s)	44, 121, 664, 1130
TaiI	ACGT	1 cut(s)	1822
TaqI	TCGA	4 cut(s)	493, 948, 1032, 1557
TatI	WGTACW	2 cut(s)	258, 1612
TauI	GCSGC	1 cut(s)	889
TfiI	GAWTC	5 cut(s)	17, 506, 758, 1492, 1549
Tru1I	TTAA	9 cut(s)	99, 114, 197, 383, 387, 750, 813, 1584, 1650
Tru9I	TTAA	9 cut(s)	99, 114, 197, 383, 387, 750, 813, 1584, 1650
TscAI	CASTG	2 cut(s)	1409, 1524
TseFI	GTSAC	3 cut(s)	38, 220, 1791
TseI	GCWGC	4 cut(s)	353, 797, 1298, 1863
Tsp45I	GTSAC	3 cut(s)	38, 220, 1791
TspGWI	ACGGA	1 cut(s)	863
TspRI	CASTG	2 cut(s)	1409, 1524
VpaK11BI	GGWCC	2 cut(s)	1025, 1952
VspI	ATTAAT	1 cut(s)	383
XapI	RAATTY	7 cut(s)	821, 866, 997, 1016, 1197, 1292, 1652
XcmI	CCANNNNNNNNNTGG	1 cut(s)	529
XmiI	GTMKAC	2 cut(s)	86, 202
XspI	CTAG	3 cut(s)	1464, 1496, 1782
Zsp2I	ATGCAT	1 cut(s)	1678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.