Rorug07G0031000

Protein kinase G11A-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
2140789 .. 2143608
2820 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0031000.1

Sequence Viewer

Length: 1506 bp
ATGATACCGCCAACGATGAACCAGATGTGGACAACAATGGGTTCAACCCTAGCCAGCTTCATGTTTGTTTGGGCCATCATCCGCCAGTACTGCCCTTACGAGCTCCGTAGATTCTTTGAAAAATACTCCCACAGAATCATGGGCTACTTCTACCCCTACATCAAAATCTCCATCCACGAGTTCACGGGCGACCGCCTCAAGCGGAGCGAGGCCTACGCCGCCGTGGAGGCCTATCTCAGCTCCAACACTTCAAAAAGCGCCAAAAGACTCAAGGCAGAGATGGTCAAAGACAGCAGCAACTTGGTTCTGAGCATGGACGAGTATGAAAGAGTCACAGATGAGTTTCATGGTGCAACTGTGTGGTGGGTTCTGACCAAAGCTCTGTCGCCGGGCCGGTCCATGTCAATGTCTTACTATCCGGAGCAGGAGAAAAGGTTTTACAAGCTCACTTTTCACAAGAAGTACAGGGAGATCATCACAGGGTCTTACTTAGACCATGTGGTGAAAGAAGGCAAGGAAGTTAGGGTTAGGAATAGGCAGAGGAAGCTTTACACAAATAGCCCCGGTTACAAGTGGCCTAGCTACAAGCAGACTATGTGGAGTCACATTGTGTTTGAGCATCCAGCGACGTTCGAAACAATGGCGTTGGAGCCAGAAAAGAAGAAGGAGATCATTGAAGACTTGGTGACTTTTAGTAAGAGTAAAGATTTCTATGCAAGAATTGGGAAAGCTTGGAAAAGGGGGTACTTGCTTTATGGGCCACCAGGGACTGGGAAGTCCACCATGATTGCAGCAATGGCTAACTTGCTGAGCTATGATGTCTATGATCTTGAGCTCACTGCTGTGAAGGACAACACAGAGCTGAGGAAGCTTTTGATCGAGACGACAAGTAAGTCTATAATTGTCATTGAGGATATTGATTGCTCACTTGATCTAACAGGTCAGAGGAAGAAGAAAGCAGAGAAGGGTTGTGTGGAAGATGAGATTAATAAGGCAAGTAAGGAGAGGATGAAGGAGCCAAAAGAGGAGGGTGGTAGTGGAAGTAGTAAGGTCACTCTTTCTGGGCTTTTGAATTTCATTGATGGGCTTTGGTCTGCTTGCGGGGGTGAGAGGCTGGTGGTTTTTACTACTAATTATGTTGAGAAATTGGATCCTGCATTGATTAGGAGGGGTAGAATGGACAAGCATATTGAGCTTTCTTATTGTAGTTTTGAAGGATTCAAAGTTTTGGCAAAGAATTACTTAAAGCTTGAGAGTCATGAAATGTTTGATAGGATTCAGAAGCTAATGGGAGAGACCAAAATGACCCCTGCTGATGTAGCTGAGAATCTCATGCCCAAGTCTCCACAAGATGATCCAGAGAGGTGTCTTTCGAATTTCATTCAAGCTCTTGAAGAAGTTAAGGAGGAAGAAGAAGCCAAGAAGAATGCTGAAGAAGTGAAAGAGATTGCTGCTACAACAAAGGAGCTGCCACAAGAAAACAAAGATGTTGAGGTAACAGAATGA

Protein Analysis

501

Amino Acids

57.93

Weight (kDa)

7.97

Isoelectric Point (pI)

45.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 31 - 125 1.4e-26 Domain associated at C-terminal with AAA
AAA PF00004 249 - 313 8.6e-09 ATPase family associated with various cellular activities (AAA)
AAA PF00004 327 - 400 4.4e-08 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 402 - 475 7.1e-35 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 775, 892
AccB7I CCANNNNNTGG 1 cut(s) 770
AccIII TCCGGA 1 cut(s) 418
AciI CCGC 6 cut(s) 8, 82, 193, 202, 219, 1101
AclWI GGATC 3 cut(s) 1145, 1158, 1349
AcsI RAATTY 2 cut(s) 1072, 1375
AcuI CTGAAG 1 cut(s) 1452
AdeI CACNNNGTG 1 cut(s) 610
AfaI GTAC 3 cut(s) 89, 464, 746
AfiI CCNNNNNNNGG 1 cut(s) 770
AgsI TTSAA 9 cut(s) 45, 119, 252, 677, 1072, 1214, 1222, 1385, 1394
AjnI CCWGG 1 cut(s) 763
AleI CACNNNNGTG 1 cut(s) 842
Alw21I GWGCWC 2 cut(s) 105, 837
Alw26I GTCTC 3 cut(s) 875, 1289, 1347
AlwI GGATC 3 cut(s) 1145, 1158, 1349
AlwNI CAGNNNCTG 1 cut(s) 770
Aor13HI TCCGGA 1 cut(s) 418
AoxI GGCC 6 cut(s) 72, 210, 228, 391, 575, 758
ApeKI GCWGC 4 cut(s) 294, 791, 1451, 1468
ApoI RAATTY 2 cut(s) 1072, 1375
AseI ATTAAT 1 cut(s) 987
AspLEI GCGC 1 cut(s) 260
AspS9I GGNCC 4 cut(s) 72, 391, 396, 758
AsuC2I CCSGG 2 cut(s) 390, 564
AsuHPI GGTGA 3 cut(s) 514, 697, 1118
AsuII TTCGAA 2 cut(s) 633, 1373
AvaII GGWCC 1 cut(s) 396
BamHI GGATCC 1 cut(s) 1150
BanII GRGCYC 2 cut(s) 105, 837
BauI CACGAG 1 cut(s) 176
BbsI GAAGAC 1 cut(s) 684
Bbv12I GWGCWC 2 cut(s) 105, 837
BbvCI CCTCAGC 1 cut(s) 863
BbvI GCAGC 4 cut(s) 306, 803, 1438, 1455
BccI CCATC 4 cut(s) 83, 179, 274, 1076
BceAI ACGGC 1 cut(s) 206
BciT130I CCWGG 1 cut(s) 765
BcnI CCSGG 2 cut(s) 390, 564
BcoDI GTCTC 3 cut(s) 875, 1289, 1347
BfaI CTAG 2 cut(s) 50, 579
BfoI RGCGCY 1 cut(s) 261
BglI GCCNNNNNGGC 1 cut(s) 227
BisI GCNGC 5 cut(s) 219, 295, 792, 1452, 1469
BlpI GCTNAGC 1 cut(s) 809
BlsI GCNGC 5 cut(s) 220, 296, 793, 1453, 1470
BmcAI AGTACT 1 cut(s) 89
Bme1390I CCNGG 3 cut(s) 390, 564, 765
Bme18I GGWCC 1 cut(s) 396
BmgT120I GGNCC 4 cut(s) 72, 391, 396, 758
BmiI GGNNCC 3 cut(s) 651, 1017, 1152
BmrFI CCNGG 3 cut(s) 390, 564, 765
BmrI ACTGGG 1 cut(s) 780
BmsI GCATC 1 cut(s) 628
BmuI ACTGGG 1 cut(s) 780
BpiI GAAGAC 1 cut(s) 684
Bpu10I CCTNAGC 1 cut(s) 863
Bpu1102I GCTNAGC 1 cut(s) 809
Bpu14I TTCGAA 2 cut(s) 633, 1373
BpuEI CTTGAG 4 cut(s) 182, 254, 851, 1271
BpuMI CCSGG 2 cut(s) 390, 564
BsaI GGTCTC 1 cut(s) 1289
BsaJI CCNNGG 3 cut(s) 222, 562, 764
BsaWI WCCGGW 1 cut(s) 418
BsaXI ACNNNNNCTCC 2 cut(s) 419, 449
Bsc4I CCNNNNNNNGG 1 cut(s) 770
Bse118I RCCGGY 1 cut(s) 393
Bse1I ACTGG 2 cut(s) 85, 775
Bse3DI GCAATG 1 cut(s) 801
BseAI TCCGGA 1 cut(s) 418
BseBI CCWGG 1 cut(s) 765
BseDI CCNNGG 3 cut(s) 222, 562, 764
BseGI GGATG 4 cut(s) 78, 171, 619, 1014
BseLI CCNNNNNNNGG 1 cut(s) 770
BseMI GCAATG 1 cut(s) 801
BseMII CTCAG 5 cut(s) 250, 299, 800, 854, 1314
BseNI ACTGG 2 cut(s) 85, 775
BseRI GAGGAG 1 cut(s) 1040
BseXI GCAGC 4 cut(s) 306, 803, 1438, 1455
Bsh1285I CGRYCG 1 cut(s) 193
BshFI GGCC 6 cut(s) 74, 212, 230, 393, 577, 760
BsiEI CGRYCG 1 cut(s) 193
BsiHKAI GWGCWC 2 cut(s) 105, 837
BsiSI CCGG 4 cut(s) 389, 394, 419, 564
BslFI GGGAC 1 cut(s) 781
BslI CCNNNNNNNGG 1 cut(s) 770
BsmAI GTCTC 3 cut(s) 875, 1289, 1347
BsmBI CGTCTC 1 cut(s) 875
BsmFI GGGAC 1 cut(s) 781
BsmI GAATGC 1 cut(s) 1432
BsnI GGCC 6 cut(s) 74, 212, 230, 393, 577, 760
Bso31I GGTCTC 1 cut(s) 1289
Bsp119I TTCGAA 2 cut(s) 633, 1373
Bsp1286I GDGCHC 2 cut(s) 105, 837
Bsp13I TCCGGA 1 cut(s) 418
Bsp143I GATC 7 cut(s) 471, 669, 826, 876, 931, 1150, 1354
Bsp1720I GCTNAGC 1 cut(s) 809
BspACI CCGC 6 cut(s) 8, 82, 193, 202, 219, 1101
BspANI GGCC 6 cut(s) 74, 212, 230, 393, 577, 760
BspCNI CTCAG 5 cut(s) 249, 300, 801, 855, 1315
BspEI TCCGGA 1 cut(s) 418
BspHI TCATGA 1 cut(s) 1258
BspLI GGNNCC 3 cut(s) 651, 1017, 1152
BspPI GGATC 3 cut(s) 1145, 1158, 1349
BspT104I TTCGAA 2 cut(s) 633, 1373
BspTNI GGTCTC 1 cut(s) 1289
BsrDI GCAATG 1 cut(s) 801
BsrFI RCCGGY 1 cut(s) 393
BsrI ACTGG 2 cut(s) 85, 775
BssAI RCCGGY 1 cut(s) 393
BssECI CCNNGG 3 cut(s) 222, 562, 764
BssMI GATC 7 cut(s) 471, 669, 826, 876, 931, 1150, 1354
BssSI CACGAG 1 cut(s) 176
Bst2BI CACGAG 1 cut(s) 176
Bst2UI CCWGG 1 cut(s) 765
Bst4CI ACNGT 1 cut(s) 358
BstBI TTCGAA 2 cut(s) 633, 1373
BstC8I GCNNGC 2 cut(s) 55, 1099
BstDEI CTNAG 6 cut(s) 236, 308, 490, 809, 863, 1323
BstDSI CCRYGG 1 cut(s) 222
BstF5I GGATG 4 cut(s) 78, 171, 619, 1014
BstH2I RGCGCY 1 cut(s) 261
BstHHI GCGC 1 cut(s) 260
BstKTI GATC 7 cut(s) 474, 672, 829, 879, 934, 1153, 1357
BstMAI GTCTC 3 cut(s) 875, 1289, 1347
BstMBI GATC 7 cut(s) 471, 669, 826, 876, 931, 1150, 1354
BstMCI CGRYCG 1 cut(s) 193
BstMWI GCNNNNNNNGC 9 cut(s) 90, 218, 227, 544, 757, 797, 868, 1192, 1319
BstNI CCWGG 1 cut(s) 765
BstSCI CCNGG 3 cut(s) 388, 562, 763
BstV1I GCAGC 4 cut(s) 306, 803, 1438, 1455
BstV2I GAAGAC 1 cut(s) 684
BstX2I RGATCY 1 cut(s) 1150
BstYI RGATCY 1 cut(s) 1150
BsuRI GGCC 6 cut(s) 74, 212, 230, 393, 577, 760
BtgI CCRYGG 1 cut(s) 222
BtsCI GGATG 4 cut(s) 78, 171, 619, 1014
BtsI GCAGTG 1 cut(s) 837
BtsIMutI CAGTG 1 cut(s) 837
Cac8I GCNNGC 2 cut(s) 55, 1099
CaiI CAGNNNCTG 1 cut(s) 770
CciI TCATGA 1 cut(s) 1258
CfoI GCGC 1 cut(s) 260
Cfr10I RCCGGY 1 cut(s) 393
Cfr13I GGNCC 4 cut(s) 72, 391, 396, 758
Csp6I GTAC 3 cut(s) 88, 463, 745
CspCI CAANNNNNGTGG 2 cut(s) 769, 804
CviAII CATG 9 cut(s) 61, 139, 313, 347, 400, 497, 784, 1259, 1333
CviQI GTAC 3 cut(s) 88, 463, 745
DdeI CTNAG 6 cut(s) 236, 308, 490, 809, 863, 1323
DpnI GATC 7 cut(s) 473, 671, 828, 878, 933, 1152, 1356
DpnII GATC 7 cut(s) 471, 669, 826, 876, 931, 1150, 1354
DraIII CACNNNGTG 1 cut(s) 610
DrdI GACNNNNNNGTC 2 cut(s) 775, 892
DseDI GACNNNNNNGTC 2 cut(s) 775, 892
EciI GGCGGA 1 cut(s) 71
Ecl136II GAGCTC 2 cut(s) 103, 835
Eco147I AGGCCT 2 cut(s) 212, 230
Eco24I GRGCYC 2 cut(s) 105, 837
Eco31I GGTCTC 1 cut(s) 1289
Eco47I GGWCC 1 cut(s) 396
Eco53kI GAGCTC 2 cut(s) 103, 835
Eco57I CTGAAG 1 cut(s) 1452
EcoICRI GAGCTC 2 cut(s) 103, 835
EcoRII CCWGG 1 cut(s) 763
EcoT38I GRGCYC 2 cut(s) 105, 837
Esp3I CGTCTC 1 cut(s) 875
FaeI CATG 9 cut(s) 64, 142, 316, 350, 403, 500, 787, 1262, 1336
FalI AAGNNNNNCTT 2 cut(s) 1226, 1258
FaqI GGGAC 1 cut(s) 781
FatI CATG 9 cut(s) 60, 138, 312, 346, 399, 496, 783, 1258, 1332
FauI CCCGC 1 cut(s) 1094
Fnu4HI GCNGC 5 cut(s) 219, 295, 792, 1452, 1469
FokI GGATG 4 cut(s) 65, 158, 606, 1021
FriOI GRGCYC 2 cut(s) 105, 837
Fsp4HI GCNGC 5 cut(s) 219, 295, 792, 1452, 1469
FspBI CTAG 2 cut(s) 50, 579
GlaI GCGC 1 cut(s) 259
GluI GCNGC 5 cut(s) 219, 295, 792, 1452, 1469
HaeII RGCGCY 1 cut(s) 261
HaeIII GGCC 6 cut(s) 74, 212, 230, 393, 577, 760
HapII CCGG 4 cut(s) 389, 394, 419, 564
HhaI GCGC 1 cut(s) 260
Hin1II CATG 9 cut(s) 64, 142, 316, 350, 403, 500, 787, 1262, 1336
Hin6I GCGC 1 cut(s) 258
HinP1I GCGC 1 cut(s) 258
HindIII AAGCTT 4 cut(s) 545, 729, 869, 1247
HinfI GANTC 9 cut(s) 111, 135, 267, 330, 601, 1218, 1255, 1276, 1327
HpaII CCGG 4 cut(s) 389, 394, 419, 564
HphI GGTGA 3 cut(s) 514, 697, 1118
Hpy166II GTNNAC 3 cut(s) 30, 183, 780
Hpy188I TCNGA 4 cut(s) 309, 372, 945, 1281
Hpy188III TCNNGA 6 cut(s) 419, 830, 880, 1259, 1358, 1391
Hpy8I GTNNAC 3 cut(s) 30, 183, 780
Hpy99I CGWCG 1 cut(s) 631
HpyAV CCTTC 6 cut(s) 503, 658, 841, 958, 1006, 1208
HpyCH4III ACNGT 1 cut(s) 358
HpyCH4IV ACGT 1 cut(s) 629
HpyCH4V TGCA 4 cut(s) 353, 716, 791, 1157
HpyF10VI GCNNNNNNNGC 9 cut(s) 90, 218, 227, 544, 757, 797, 868, 1192, 1319
HpyF3I CTNAG 6 cut(s) 236, 308, 490, 809, 863, 1323
HpySE526I ACGT 1 cut(s) 629
Hsp92II CATG 9 cut(s) 64, 142, 316, 350, 403, 500, 787, 1262, 1336
HspAI GCGC 1 cut(s) 258
Kpn2I TCCGGA 1 cut(s) 418
Kzo9I GATC 7 cut(s) 471, 669, 826, 876, 931, 1150, 1354
LmnI GCTCC 7 cut(s) 108, 204, 245, 421, 649, 1015, 1465
Lsp1109I GCAGC 4 cut(s) 306, 803, 1438, 1455
LweI GCATC 1 cut(s) 628
MaeI CTAG 2 cut(s) 50, 579
MaeII ACGT 1 cut(s) 629
MaeIII GTNAC 6 cut(s) 331, 566, 602, 685, 1051, 1495
MalI GATC 7 cut(s) 473, 671, 828, 878, 933, 1152, 1356
MboI GATC 7 cut(s) 471, 669, 826, 876, 931, 1150, 1354
MflI RGATCY 1 cut(s) 1150
MhlI GDGCHC 2 cut(s) 105, 837
MluCI AATT 7 cut(s) 720, 900, 1072, 1132, 1145, 1237, 1375
MlyI GAGTC 4 cut(s) 261, 339, 610, 1264
MmeI TCCRAC 2 cut(s) 267, 627
MroI TCCGGA 1 cut(s) 418
MseI TTAA 3 cut(s) 987, 1244, 1401
MslI CAYNNNNRTG 2 cut(s) 404, 842
MspI CCGG 4 cut(s) 389, 394, 419, 564
MspR9I CCNGG 3 cut(s) 390, 564, 765
Mva1269I GAATGC 1 cut(s) 1432
MvaI CCWGG 1 cut(s) 765
MwoI GCNNNNNNNGC 9 cut(s) 90, 218, 227, 544, 757, 797, 868, 1192, 1319
NciI CCSGG 2 cut(s) 390, 564
NdeII GATC 7 cut(s) 471, 669, 826, 876, 931, 1150, 1354
NlaIII CATG 9 cut(s) 64, 142, 316, 350, 403, 500, 787, 1262, 1336
NlaIV GGNNCC 3 cut(s) 651, 1017, 1152
NmuCI GTSAC 4 cut(s) 331, 602, 685, 1051
NspV TTCGAA 2 cut(s) 633, 1373
OliI CACNNNNGTG 1 cut(s) 842
PagI TCATGA 1 cut(s) 1258
PceI AGGCCT 2 cut(s) 212, 230
PctI GAATGC 1 cut(s) 1432
PfeI GAWTC 5 cut(s) 111, 135, 1218, 1276, 1327
PflMI CCANNNNNTGG 1 cut(s) 770
PkrI GCNGC 5 cut(s) 220, 296, 793, 1453, 1470
PleI GAGTC 4 cut(s) 261, 338, 609, 1263
PpsI GAGTC 4 cut(s) 261, 338, 609, 1263
PshBI ATTAAT 1 cut(s) 987
Psp124BI GAGCTC 2 cut(s) 105, 837
Psp6I CCWGG 1 cut(s) 763
PspGI CCWGG 1 cut(s) 763
PspN4I GGNNCC 3 cut(s) 651, 1017, 1152
PspPI GGNCC 4 cut(s) 72, 391, 396, 758
PstNI CAGNNNCTG 1 cut(s) 770
PsuI RGATCY 1 cut(s) 1150
RsaI GTAC 3 cut(s) 89, 464, 746
RsaNI GTAC 3 cut(s) 88, 463, 745
RseI CAYNNNNRTG 2 cut(s) 404, 842
SacI GAGCTC 2 cut(s) 105, 837
SaqAI TTAA 3 cut(s) 987, 1244, 1401
SatI GCNGC 5 cut(s) 219, 295, 792, 1452, 1469
Sau3AI GATC 7 cut(s) 471, 669, 826, 876, 931, 1150, 1354
Sau96I GGNCC 4 cut(s) 72, 391, 396, 758
ScaI AGTACT 1 cut(s) 89
SchI GAGTC 4 cut(s) 261, 339, 610, 1264
ScrFI CCNGG 3 cut(s) 390, 564, 765
SduI GDGCHC 2 cut(s) 105, 837
SfaNI GCATC 1 cut(s) 628
SfuI TTCGAA 2 cut(s) 633, 1373
SinI GGWCC 1 cut(s) 396
SmiMI CAYNNNNRTG 2 cut(s) 404, 842
SmlI CTYRAG 4 cut(s) 197, 269, 830, 1250
SmoI CTYRAG 4 cut(s) 197, 269, 830, 1250
Sse9I AATT 7 cut(s) 720, 900, 1072, 1132, 1145, 1237, 1375
SseBI AGGCCT 2 cut(s) 212, 230
SsiI CCGC 6 cut(s) 8, 82, 193, 202, 219, 1101
SspMI CTAG 2 cut(s) 50, 579
SstI GAGCTC 2 cut(s) 105, 837
StuI AGGCCT 2 cut(s) 212, 230
StyD4I CCNGG 3 cut(s) 388, 562, 763
TaaI ACNGT 1 cut(s) 358
TaiI ACGT 1 cut(s) 632
TaqI TCGA 3 cut(s) 633, 879, 1373
TasI AATT 7 cut(s) 720, 900, 1072, 1132, 1145, 1237, 1375
TatI WGTACW 2 cut(s) 87, 462
TauI GCSGC 1 cut(s) 221
TfiI GAWTC 5 cut(s) 111, 135, 1218, 1276, 1327
Tru1I TTAA 3 cut(s) 987, 1244, 1401
Tru9I TTAA 3 cut(s) 987, 1244, 1401
TscAI CASTG 1 cut(s) 844
TseFI GTSAC 4 cut(s) 331, 602, 685, 1051
TseI GCWGC 4 cut(s) 294, 791, 1451, 1468
Tsp45I GTSAC 4 cut(s) 331, 602, 685, 1051
TspDTI ATGAA 8 cut(s) 32, 49, 335, 339, 1025, 1066, 1275, 1369
TspGWI ACGGA 1 cut(s) 95
TspRI CASTG 1 cut(s) 844
Van91I CCANNNNNTGG 1 cut(s) 770
VpaK11BI GGWCC 1 cut(s) 396
VspI ATTAAT 1 cut(s) 987
XapI RAATTY 2 cut(s) 1072, 1375
XspI CTAG 2 cut(s) 50, 579
ZrmI AGTACT 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.