50S ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17560 AT5G47190 |
| fragaria_vesca | FvH4_5g20190 FvH4_5g20190 |
| malus_domestica | MD04G1051500.v1.1 MD06G1048700.v1.1 |
| prunus_persica | Prupe.5G058800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0205151 |
| rosa_laevigata | RLG00000003395 |
| rosa_multiflora | Rmu_sc0001072.1_g000005 Rmu_sc0009349.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00252540 |
| rosa_rugosa | Rorug07G0088500 |
| rosa_samantha | Rh7AG219400 Rh7BG215800 Rh7CG232400 Rh7DG226700 |
| rosa_wichuraiana | Rw7G018980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 324 |
| AccB1I | GGYRCC | 3 cut(s) | 203, 324, 1061 |
| AccII | CGCG | 2 cut(s) | 808, 810 |
| AccIII | TCCGGA | 2 cut(s) | 871, 1024 |
| AclWI | GGATC | 3 cut(s) | 645, 882, 1503 |
| AcoI | YGGCCR | 3 cut(s) | 31, 39, 889 |
| AcsI | RAATTY | 3 cut(s) | 174, 405, 1032 |
| AcuI | CTGAAG | 6 cut(s) | 641, 784, 941, 1259, 1377, 1499 |
| AdeI | CACNNNGTG | 2 cut(s) | 357, 1215 |
| AfaI | GTAC | 1 cut(s) | 326 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 214, 256, 394, 1072, 1114, 1252 |
| AflII | CTTAAG | 3 cut(s) | 5, 362, 1220 |
| AflIII | ACRYGT | 2 cut(s) | 748, 1606 |
| AgsI | TTSAA | 7 cut(s) | 91, 101, 150, 616, 1008, 1474, 1690 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 463, 1321 |
| AhlI | ACTAGT | 1 cut(s) | 1591 |
| AluBI | AGCT | 7 cut(s) | 53, 335, 503, 798, 911, 1193, 1361 |
| AluI | AGCT | 7 cut(s) | 53, 335, 503, 798, 911, 1193, 1361 |
| Alw21I | GWGCWC | 4 cut(s) | 55, 320, 913, 1178 |
| Alw26I | GTCTC | 5 cut(s) | 149, 274, 369, 1132, 1227 |
| AlwI | GGATC | 3 cut(s) | 645, 882, 1503 |
| Ama87I | CYCGRG | 2 cut(s) | 207, 1065 |
| Aor13HI | TCCGGA | 2 cut(s) | 871, 1024 |
| ApoI | RAATTY | 3 cut(s) | 174, 405, 1032 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 86 |
| Asp718I | GGTACC | 1 cut(s) | 324 |
| AspLEI | GCGC | 2 cut(s) | 808, 810 |
| AspS9I | GGNCC | 5 cut(s) | 59, 587, 898, 917, 1445 |
| AsuC2I | CCSGG | 4 cut(s) | 208, 209, 1066, 1067 |
| AsuHPI | GGTGA | 3 cut(s) | 239, 1097, 1201 |
| AvaI | CYCGRG | 2 cut(s) | 207, 1065 |
| BalI | TGGCCA | 2 cut(s) | 33, 891 |
| BanI | GGYRCC | 3 cut(s) | 203, 324, 1061 |
| BanII | GRGCYC | 2 cut(s) | 55, 913 |
| BauI | CACGAG | 2 cut(s) | 382, 1240 |
| Bbv12I | GWGCWC | 4 cut(s) | 55, 320, 913, 1178 |
| BccI | CCATC | 8 cut(s) | 221, 295, 587, 670, 1079, 1153, 1445, 1528 |
| BceAI | ACGGC | 3 cut(s) | 394, 517, 1252 |
| BciVI | GTATCC | 1 cut(s) | 1194 |
| BcnI | CCSGG | 4 cut(s) | 208, 209, 1066, 1067 |
| BcoDI | GTCTC | 5 cut(s) | 149, 274, 369, 1132, 1227 |
| BcuI | ACTAGT | 1 cut(s) | 1591 |
| BfaI | CTAG | 4 cut(s) | 159, 1017, 1154, 1592 |
| BfrI | CTTAAG | 3 cut(s) | 5, 362, 1220 |
| BfuI | GTATCC | 1 cut(s) | 1194 |
| Bme1390I | CCNGG | 4 cut(s) | 208, 209, 1066, 1067 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 463, 1321 |
| BmeT110I | CYCGRG | 2 cut(s) | 207, 1065 |
| BmgT120I | GGNCC | 5 cut(s) | 59, 587, 898, 917, 1445 |
| BmiI | GGNNCC | 8 cut(s) | 12, 118, 205, 326, 769, 870, 976, 1063 |
| BmrFI | CCNGG | 4 cut(s) | 208, 209, 1066, 1067 |
| BmrI | ACTGGG | 1 cut(s) | 450 |
| BmuI | ACTGGG | 1 cut(s) | 450 |
| BpmI | CTGGAG | 3 cut(s) | 69, 256, 1114 |
| BpuMI | CCSGG | 4 cut(s) | 208, 209, 1066, 1067 |
| BsaJI | CCNNGG | 2 cut(s) | 207, 1065 |
| BsaWI | WCCGGW | 2 cut(s) | 871, 1024 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 214, 256, 394, 1072, 1114, 1252 |
| Bse118I | RCCGGY | 1 cut(s) | 41 |
| Bse1I | ACTGG | 2 cut(s) | 445, 1303 |
| BseAI | TCCGGA | 2 cut(s) | 871, 1024 |
| BseDI | CCNNGG | 2 cut(s) | 207, 1065 |
| BseGI | GGATG | 2 cut(s) | 241, 1099 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 214, 256, 394, 1072, 1114, 1252 |
| BseMII | CTCAG | 4 cut(s) | 144, 497, 843, 1355 |
| BseNI | ACTGG | 2 cut(s) | 445, 1303 |
| BsePI | GCGCGC | 1 cut(s) | 806 |
| BseRI | GAGGAG | 1 cut(s) | 769 |
| Bsh1236I | CGCG | 2 cut(s) | 808, 810 |
| BshNI | GGYRCC | 3 cut(s) | 203, 324, 1061 |
| BsiHKAI | GWGCWC | 4 cut(s) | 55, 320, 913, 1178 |
| BsiHKCI | CYCGRG | 2 cut(s) | 207, 1065 |
| BsiSI | CCGG | 7 cut(s) | 42, 208, 455, 872, 1025, 1066, 1313 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 214, 256, 394, 1072, 1114, 1252 |
| BsmAI | GTCTC | 5 cut(s) | 149, 274, 369, 1132, 1227 |
| BsmBI | CGTCTC | 2 cut(s) | 369, 1227 |
| BsmI | GAATGC | 2 cut(s) | 131, 989 |
| BsoBI | CYCGRG | 2 cut(s) | 207, 1065 |
| Bsp1286I | GDGCHC | 4 cut(s) | 55, 320, 913, 1178 |
| Bsp13I | TCCGGA | 2 cut(s) | 871, 1024 |
| Bsp143I | GATC | 4 cut(s) | 16, 637, 874, 1495 |
| BspCNI | CTCAG | 4 cut(s) | 145, 498, 842, 1356 |
| BspEI | TCCGGA | 2 cut(s) | 871, 1024 |
| BspFNI | CGCG | 2 cut(s) | 808, 810 |
| BspHI | TCATGA | 2 cut(s) | 484, 1342 |
| BspLI | GGNNCC | 8 cut(s) | 12, 118, 205, 326, 769, 870, 976, 1063 |
| BspPI | GGATC | 3 cut(s) | 645, 882, 1503 |
| BspT107I | GGYRCC | 3 cut(s) | 203, 324, 1061 |
| BspTI | CTTAAG | 3 cut(s) | 5, 362, 1220 |
| BsrFI | RCCGGY | 1 cut(s) | 41 |
| BsrI | ACTGG | 2 cut(s) | 445, 1303 |
| BssAI | RCCGGY | 1 cut(s) | 41 |
| BssECI | CCNNGG | 2 cut(s) | 207, 1065 |
| BssHII | GCGCGC | 1 cut(s) | 806 |
| BssMI | GATC | 4 cut(s) | 16, 637, 874, 1495 |
| BssSI | CACGAG | 2 cut(s) | 382, 1240 |
| Bst2BI | CACGAG | 2 cut(s) | 382, 1240 |
| Bst4CI | ACNGT | 5 cut(s) | 345, 577, 848, 1203, 1435 |
| Bst6I | CTCTTC | 3 cut(s) | 102, 778, 960 |
| BstAFI | CTTAAG | 3 cut(s) | 5, 362, 1220 |
| BstC8I | GCNNGC | 4 cut(s) | 31, 239, 808, 1174 |
| BstDEI | CTNAG | 5 cut(s) | 153, 506, 829, 1364, 1698 |
| BstF5I | GGATG | 2 cut(s) | 241, 1099 |
| BstFNI | CGCG | 2 cut(s) | 808, 810 |
| BstHHI | GCGC | 2 cut(s) | 808, 810 |
| BstKTI | GATC | 4 cut(s) | 19, 640, 877, 1498 |
| BstMAI | GTCTC | 5 cut(s) | 149, 274, 369, 1132, 1227 |
| BstMBI | GATC | 4 cut(s) | 16, 637, 874, 1495 |
| BstNSI | RCATGY | 2 cut(s) | 752, 1610 |
| BstSCI | CCNGG | 4 cut(s) | 206, 207, 1064, 1065 |
| BstUI | CGCG | 2 cut(s) | 808, 810 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 127, 985 |
| BsuI | GTATCC | 1 cut(s) | 1194 |
| BtsCI | GGATG | 2 cut(s) | 241, 1099 |
| BtsIMutI | CAGTG | 1 cut(s) | 808 |
| Cac8I | GCNNGC | 4 cut(s) | 31, 239, 808, 1174 |
| CciI | TCATGA | 2 cut(s) | 484, 1342 |
| CfoI | GCGC | 2 cut(s) | 808, 810 |
| Cfr10I | RCCGGY | 1 cut(s) | 41 |
| Cfr13I | GGNCC | 5 cut(s) | 59, 587, 898, 917, 1445 |
| Cfr9I | CCCGGG | 2 cut(s) | 207, 1065 |
| Csp6I | GTAC | 1 cut(s) | 325 |
| CviQI | GTAC | 1 cut(s) | 325 |
| DdeI | CTNAG | 5 cut(s) | 153, 506, 829, 1364, 1698 |
| DpnI | GATC | 4 cut(s) | 18, 639, 876, 1497 |
| DpnII | GATC | 4 cut(s) | 16, 637, 874, 1495 |
| DraI | TTTAAA | 1 cut(s) | 403 |
| DraIII | CACNNNGTG | 2 cut(s) | 357, 1215 |
| DriI | GACNNNNNGTC | 2 cut(s) | 463, 1321 |
| EaeI | YGGCCR | 3 cut(s) | 31, 39, 889 |
| Eam1104I | CTCTTC | 3 cut(s) | 102, 778, 960 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 463, 1321 |
| EarI | CTCTTC | 3 cut(s) | 102, 778, 960 |
| Ecl136II | GAGCTC | 2 cut(s) | 53, 911 |
| Eco24I | GRGCYC | 2 cut(s) | 55, 913 |
| Eco53kI | GAGCTC | 2 cut(s) | 53, 911 |
| Eco57I | CTGAAG | 6 cut(s) | 641, 784, 941, 1259, 1377, 1499 |
| Eco88I | CYCGRG | 2 cut(s) | 207, 1065 |
| EcoICRI | GAGCTC | 2 cut(s) | 53, 911 |
| EcoT22I | ATGCAT | 2 cut(s) | 571, 1429 |
| EcoT38I | GRGCYC | 2 cut(s) | 55, 913 |
| Esp3I | CGTCTC | 2 cut(s) | 369, 1227 |
| FokI | GGATG | 2 cut(s) | 228, 1086 |
| FriOI | GRGCYC | 2 cut(s) | 55, 913 |
| FspBI | CTAG | 4 cut(s) | 159, 1017, 1154, 1592 |
| GlaI | GCGC | 2 cut(s) | 807, 809 |
| GsuI | CTGGAG | 3 cut(s) | 69, 256, 1114 |
| HapII | CCGG | 7 cut(s) | 42, 208, 455, 872, 1025, 1066, 1313 |
| HhaI | GCGC | 2 cut(s) | 808, 810 |
| Hin6I | GCGC | 2 cut(s) | 806, 808 |
| HinP1I | GCGC | 2 cut(s) | 806, 808 |
| HindIII | AAGCTT | 2 cut(s) | 333, 1191 |
| HpaII | CCGG | 7 cut(s) | 42, 208, 455, 872, 1025, 1066, 1313 |
| HphI | GGTGA | 3 cut(s) | 239, 1097, 1201 |
| Hpy166II | GTNNAC | 1 cut(s) | 1271 |
| Hpy8I | GTNNAC | 1 cut(s) | 1271 |
| HpyAV | CCTTC | 3 cut(s) | 752, 1401, 1610 |
| HpyCH4III | ACNGT | 5 cut(s) | 345, 577, 848, 1203, 1435 |
| HpyCH4IV | ACGT | 3 cut(s) | 112, 300, 970 |
| HpyCH4V | TGCA | 8 cut(s) | 77, 241, 569, 746, 935, 1099, 1427, 1604 |
| HpyF3I | CTNAG | 5 cut(s) | 153, 506, 829, 1364, 1698 |
| HpySE526I | ACGT | 3 cut(s) | 112, 300, 970 |
| HspAI | GCGC | 2 cut(s) | 806, 808 |
| Kpn2I | TCCGGA | 2 cut(s) | 871, 1024 |
| KpnI | GGTACC | 1 cut(s) | 328 |
| Kzo9I | GATC | 4 cut(s) | 16, 637, 874, 1495 |
| LmnI | GCTCC | 6 cut(s) | 50, 116, 767, 874, 908, 974 |
| MaeI | CTAG | 4 cut(s) | 159, 1017, 1154, 1592 |
| MaeII | ACGT | 3 cut(s) | 112, 300, 970 |
| MalI | GATC | 4 cut(s) | 18, 639, 876, 1497 |
| MboI | GATC | 4 cut(s) | 16, 637, 874, 1495 |
| MfeI | CAATTG | 2 cut(s) | 608, 1466 |
| MhlI | GDGCHC | 4 cut(s) | 55, 320, 913, 1178 |
| MlsI | TGGCCA | 2 cut(s) | 33, 891 |
| MluCI | AATT | 8 cut(s) | 174, 306, 405, 608, 1032, 1164, 1466, 1639 |
| MluNI | TGGCCA | 2 cut(s) | 33, 891 |
| MlyI | GAGTC | 2 cut(s) | 701, 1559 |
| Mox20I | TGGCCA | 2 cut(s) | 33, 891 |
| Mph1103I | ATGCAT | 2 cut(s) | 571, 1429 |
| MroI | TCCGGA | 2 cut(s) | 871, 1024 |
| MroXI | GAANNNNTTC | 1 cut(s) | 86 |
| MscI | TGGCCA | 2 cut(s) | 33, 891 |
| MslI | CAYNNNNRTG | 2 cut(s) | 489, 1347 |
| Msp20I | TGGCCA | 2 cut(s) | 33, 891 |
| MspCI | CTTAAG | 3 cut(s) | 5, 362, 1220 |
| MspI | CCGG | 7 cut(s) | 42, 208, 455, 872, 1025, 1066, 1313 |
| MspR9I | CCNGG | 4 cut(s) | 208, 209, 1066, 1067 |
| MunI | CAATTG | 2 cut(s) | 608, 1466 |
| Mva1269I | GAATGC | 2 cut(s) | 131, 989 |
| MvnI | CGCG | 2 cut(s) | 808, 810 |
| NciI | CCSGG | 4 cut(s) | 208, 209, 1066, 1067 |
| NdeII | GATC | 4 cut(s) | 16, 637, 874, 1495 |
| NlaIV | GGNNCC | 8 cut(s) | 12, 118, 205, 326, 769, 870, 976, 1063 |
| NsiI | ATGCAT | 2 cut(s) | 571, 1429 |
| NspI | RCATGY | 2 cut(s) | 752, 1610 |
| PagI | TCATGA | 2 cut(s) | 484, 1342 |
| PauI | GCGCGC | 1 cut(s) | 806 |
| PciI | ACATGT | 2 cut(s) | 748, 1606 |
| PctI | GAATGC | 2 cut(s) | 131, 989 |
| PdmI | GAANNNNTTC | 1 cut(s) | 86 |
| PfeI | GAWTC | 8 cut(s) | 163, 539, 597, 712, 1021, 1397, 1455, 1570 |
| PleI | GAGTC | 2 cut(s) | 700, 1558 |
| PpsI | GAGTC | 2 cut(s) | 700, 1558 |
| PscI | ACATGT | 2 cut(s) | 748, 1606 |
| Psp124BI | GAGCTC | 2 cut(s) | 55, 913 |
| PspN4I | GGNNCC | 8 cut(s) | 12, 118, 205, 326, 769, 870, 976, 1063 |
| PspPI | GGNCC | 5 cut(s) | 59, 587, 898, 917, 1445 |
| PteI | GCGCGC | 1 cut(s) | 806 |
| RsaI | GTAC | 1 cut(s) | 326 |
| RsaNI | GTAC | 1 cut(s) | 325 |
| RseI | CAYNNNNRTG | 2 cut(s) | 489, 1347 |
| SacI | GAGCTC | 2 cut(s) | 55, 913 |
| Sau3AI | GATC | 4 cut(s) | 16, 637, 874, 1495 |
| Sau96I | GGNCC | 5 cut(s) | 59, 587, 898, 917, 1445 |
| SchI | GAGTC | 2 cut(s) | 701, 1559 |
| ScrFI | CCNGG | 4 cut(s) | 208, 209, 1066, 1067 |
| SduI | GDGCHC | 4 cut(s) | 55, 320, 913, 1178 |
| SmaI | CCCGGG | 2 cut(s) | 209, 1067 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 489, 1347 |
| SmlI | CTYRAG | 3 cut(s) | 5, 362, 1220 |
| SmoI | CTYRAG | 3 cut(s) | 5, 362, 1220 |
| SpeI | ACTAGT | 1 cut(s) | 1591 |
| Sse9I | AATT | 8 cut(s) | 174, 306, 405, 608, 1032, 1164, 1466, 1639 |
| SspMI | CTAG | 4 cut(s) | 159, 1017, 1154, 1592 |
| SstI | GAGCTC | 2 cut(s) | 55, 913 |
| StyD4I | CCNGG | 4 cut(s) | 206, 207, 1064, 1065 |
| TaaI | ACNGT | 5 cut(s) | 345, 577, 848, 1203, 1435 |
| TaiI | ACGT | 3 cut(s) | 115, 303, 973 |
| TaqI | TCGA | 3 cut(s) | 314, 668, 1526 |
| TaqII | GACCGA | 2 cut(s) | 486, 1344 |
| TasI | AATT | 8 cut(s) | 174, 306, 405, 608, 1032, 1164, 1466, 1639 |
| TfiI | GAWTC | 8 cut(s) | 163, 539, 597, 712, 1021, 1397, 1455, 1570 |
| TscAI | CASTG | 1 cut(s) | 808 |
| TspDTI | ATGAA | 4 cut(s) | 123, 716, 981, 1046 |
| TspMI | CCCGGG | 2 cut(s) | 207, 1065 |
| TspRI | CASTG | 1 cut(s) | 808 |
| Vha464I | CTTAAG | 3 cut(s) | 5, 362, 1220 |
| XapI | RAATTY | 3 cut(s) | 174, 405, 1032 |
| XceI | RCATGY | 2 cut(s) | 752, 1610 |
| XmaI | CCCGGG | 2 cut(s) | 207, 1065 |
| XmnI | GAANNNNTTC | 1 cut(s) | 86 |
| XspI | CTAG | 4 cut(s) | 159, 1017, 1154, 1592 |
| Zsp2I | ATGCAT | 2 cut(s) | 571, 1429 |