Rorug07G0091200

ATP-dependent Clp protease proteolytic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0009609
Physical Location & Seq
Reverse (-)
7141968 .. 7146230
4263 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0091200.1

Sequence Viewer

Length: 1668 bp
ATGGCGAGGATGATACATAGCGGAGTACATGGGGCGAAGAAGCTTCTGAACCGCTCCGCCGACTCACGCGCCGTCATCCATTCGACGACGCCGCAGCTGAAGAAGCTACCCTTTACCACCTCCAACGGCGGCCCAGCAGCCACAGATAGAGAACATCAAACACTCCACCATGTTCTTAAATCCTGCAAACTCACTTTGGATTCCGCAACTGCAATTCAAACCCACGCTAGAATCATTACACGTGGATATGGCACATACCCTTCTCTCCTTGCTTCCCTTCTAGCTGTTTATAAGCGCTGTGGTTGTGTCACTCTTGCTACTCAACTTGTCGATCACATTTTCAATTGTGCTAATGGTATCAACTTTTTGAATCTCGTTATCGAAAGCCTAATGAGGAACGGGGAATGTGACATTGCCAAGAGGGTGTTCCGAAAAGTCCCTTGCCCGGATTTAGTAACTTGGAACACTGTCATTGGAGGTTGTGTTCGAAATGAGCGTTTTCAGGAGGCATTGGGGTTGTTCCGGAAGCTGTTGAGCTCGGATTTGGAGCCGGATGGGTTCTCGTTTTCGTCTGTTATCACTGCATGCGCCCGGCTTGGAGCGCTGCATAATGCGCAGAGGGTGCATTGTCTGATGATGAAGAAGAGAATTGAGCTGAATTTTATTCTGAGTGCAGCTCTTATAGACATGTACTCAAAGTGTGGTAGAGTGCAGACTGCTAGAGAGATTTTTGGTGCTGTCCAGCATAATGATGTCTCGGTTTGGAATGCGATGATTAATGGATTGGCGATTCACGGGCTTGCTTTGGATGCAATCGAGATATTCTCAGAGATGGAGATGGATAATGTGTTACCTGATTCAATAACTTTTGTTGCCCTTCTGAAAGCTTGTGGTCATTGTAACTTGGTGGAAGAGGGTCGCAAGCACTTTGATTTGATGACAAGTCGGTACTCAATTCAGCCAGAAATTGAGCATTACGGAGCCATGGTTGATCTCTTGGGTAGAGCTGGGCTTCTAGAAGAGGCTTATGCAACTATAAAGGCCATGGAAGTGGAGCCGGATGTTGTTATATGGAGGGCACTTCTCAGTGCCTGTAGGACTCATAAAAATCCAGAACTTGGAGAAGTTGCCATTGCCAATATATCCCGTCCCAAGAGTGGAGATTATGTGTTGCTTTCAAATACTTATTGCTCTCTAAAGAGGTGGGATAGTGCAGAGAGAGTGCGAGAAATGATGAAGAAACAGAGAGTTCGTAAAAATCAAGGGAAGAGTTGGCTTGAGTTGGAAGGTATGATCCACCAATTCAGGGCTGCTGATCAGAGACACCCCGAAATCAAATCAATATACAGAGTGTTGGAAGCATTGATCCAGCGGACCAAGTCGGAGGGCTTTATGCCTGTGACAGAGTTGGTTTTGATGGATGTATCCGAAGAGGAAAAAGAGGGAAATTTGAATTGTCACAGTGAAAAGCTGGCGTTGGCCTATGGAATCCTAAAAACAAGTCCTGGAACAGAAATCAGGATCTCAAAAAACCTTCGGATCTGTCATGATTGTCATTGCTGGATAAAAATGGTTTCAAGACTACTCAATAGAGTGATCATTGTGAGGGATAGGATTCGTTTTCACCACTTTGAAGGTGGTATGTGTTCTTGTGGAGAGTATTGGTAG

Protein Analysis

555

Amino Acids

62.46

Weight (kDa)

8.79

Isoelectric Point (pI)

39.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 149 - 198 1.5e-11 PPR repeat family
PPR PF01535 152 - 180 2.1e-06 PPR repeat
PPR_2 PF13041 251 - 298 3.8e-10 PPR repeat family
PPR PF01535 254 - 282 5.1e-06 PPR repeat
E_motif PF20431 368 - 427 1.5e-10 E motif
DYW_deaminase PF14432 463 - 555 3.6e-37 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 291
Acc16I TGCGCA 1 cut(s) 615
AccB7I CCANNNNNTGG 1 cut(s) 1118
AccBSI CCGCTC 1 cut(s) 54
AccII CGCG 1 cut(s) 69
AccIII TCCGGA 1 cut(s) 522
AciI CCGC 7 cut(s) 21, 52, 57, 92, 129, 204, 1372
AclWI GGATC 4 cut(s) 1288, 1360, 1529, 1547
AcsI RAATTY 2 cut(s) 658, 1447
AcuI CTGAAG 1 cut(s) 119
AcvI CACGTG 1 cut(s) 242
AcyI GRCGYC 1 cut(s) 89
AfaI GTAC 3 cut(s) 27, 692, 950
AfeI AGCGCT 2 cut(s) 296, 603
AfiI CCNNNNNNNGG 4 cut(s) 445, 1118, 1157, 1306
AflIII ACRYGT 2 cut(s) 239, 687
AgsI TTSAA 8 cut(s) 218, 343, 370, 861, 1179, 1453, 1578, 1634
AjnI CCWGG 1 cut(s) 1504
AjuI GAANNNNNNNTTGG 2 cut(s) 410, 442
AloI GAACNNNNNNTCC 2 cut(s) 468, 500
Alw21I GWGCWC 1 cut(s) 539
Alw26I GTCTC 2 cut(s) 760, 1315
AlwI GGATC 4 cut(s) 1288, 1360, 1529, 1547
AlwNI CAGNNNCTG 1 cut(s) 1092
Aor13HI TCCGGA 1 cut(s) 522
Aor51HI AGCGCT 2 cut(s) 296, 603
AoxI GGCC 3 cut(s) 130, 1041, 1479
ApeKI GCWGC 5 cut(s) 94, 137, 604, 674, 1310
ApoI RAATTY 2 cut(s) 658, 1447
AseI ATTAAT 1 cut(s) 777
AspLEI GCGC 5 cut(s) 71, 297, 590, 604, 616
AspS9I GGNCC 2 cut(s) 131, 1374
AsuC2I CCSGG 2 cut(s) 446, 592
AsuHPI GGTGA 1 cut(s) 1616
AsuII TTCGAA 1 cut(s) 487
AvaII GGWCC 1 cut(s) 1374
BaeGI GKGCMC 1 cut(s) 1081
BanII GRGCYC 1 cut(s) 539
BbrPI CACGTG 1 cut(s) 242
Bbv12I GWGCWC 1 cut(s) 539
BbvI GCAGC 5 cut(s) 106, 149, 591, 686, 1297
BccI CCATC 4 cut(s) 548, 826, 832, 1411
BceAI ACGGC 2 cut(s) 56, 142
BciT130I CCWGG 1 cut(s) 1506
BciVI GTATCC 1 cut(s) 1435
BclI TGATCA 2 cut(s) 1315, 1596
BcnI CCSGG 2 cut(s) 446, 592
BcoDI GTCTC 2 cut(s) 760, 1315
BfaI CTAG 4 cut(s) 228, 281, 720, 1016
BfmI CTRYAG 1 cut(s) 1093
BfoI RGCGCY 2 cut(s) 298, 605
BfuI GTATCC 1 cut(s) 1435
BisI GCNGC 7 cut(s) 92, 95, 130, 138, 605, 675, 1311
BlsI GCNGC 7 cut(s) 93, 96, 131, 139, 606, 676, 1312
Bme1390I CCNGG 3 cut(s) 446, 592, 1506
Bme18I GGWCC 1 cut(s) 1374
BmgT120I GGNCC 2 cut(s) 131, 1374
BmiI GGNNCC 3 cut(s) 549, 982, 1056
BmrFI CCNGG 3 cut(s) 446, 592, 1506
BmsI GCATC 1 cut(s) 799
BplI GAGNNNNNCTC 4 cut(s) 661, 693, 809, 841
Bpu14I TTCGAA 1 cut(s) 487
BpuEI CTTGAG 1 cut(s) 1298
BpuMI CCSGG 2 cut(s) 446, 592
BsaAI YACGTR 1 cut(s) 242
BsaHI GRCGYC 1 cut(s) 89
BsaJI CCNNGG 2 cut(s) 984, 1044
BsaWI WCCGGW 1 cut(s) 522
BsaXI ACNNNNNCTCC 6 cut(s) 468, 498, 972, 1002, 1152, 1182
Bsc4I CCNNNNNNNGG 4 cut(s) 445, 1118, 1157, 1306
Bse3DI GCAATG 3 cut(s) 411, 1131, 1555
BseAI TCCGGA 1 cut(s) 522
BseBI CCWGG 1 cut(s) 1506
BseDI CCNNGG 2 cut(s) 984, 1044
BseGI GGATG 6 cut(s) 15, 75, 559, 814, 1066, 1426
BseLI CCNNNNNNNGG 4 cut(s) 445, 1118, 1157, 1306
BseMI GCAATG 3 cut(s) 411, 1131, 1555
BseMII CTCAG 3 cut(s) 659, 840, 1099
BseSI GKGCMC 1 cut(s) 1081
BseXI GCAGC 5 cut(s) 106, 149, 591, 686, 1297
BseYI CCCAGC 2 cut(s) 133, 1007
BsgI GTGCAG 3 cut(s) 693, 731, 1233
Bsh1236I CGCG 1 cut(s) 69
BshFI GGCC 3 cut(s) 132, 1043, 1481
BsiHKAI GWGCWC 1 cut(s) 539
BsiSI CCGG 5 cut(s) 446, 523, 551, 592, 1058
BslFI GGGAC 2 cut(s) 422, 1134
BslI CCNNNNNNNGG 4 cut(s) 445, 1118, 1157, 1306
BsmAI GTCTC 2 cut(s) 760, 1315
BsmFI GGGAC 2 cut(s) 422, 1134
BsmI GAATGC 1 cut(s) 772
BsnI GGCC 3 cut(s) 132, 1043, 1481
Bsp119I TTCGAA 1 cut(s) 487
Bsp1286I GDGCHC 2 cut(s) 539, 1081
Bsp13I TCCGGA 1 cut(s) 522
Bsp143I GATC 8 cut(s) 331, 991, 1293, 1315, 1365, 1521, 1539, 1596
Bsp19I CCATGG 2 cut(s) 984, 1044
BspACI CCGC 7 cut(s) 21, 52, 57, 92, 129, 204, 1372
BspANI GGCC 3 cut(s) 132, 1043, 1481
BspCNI CTCAG 3 cut(s) 660, 839, 1098
BspEI TCCGGA 1 cut(s) 522
BspFNI CGCG 1 cut(s) 69
BspHI TCATGA 1 cut(s) 1546
BspLI GGNNCC 3 cut(s) 549, 982, 1056
BspPI GGATC 4 cut(s) 1288, 1360, 1529, 1547
BspT104I TTCGAA 1 cut(s) 487
BsrBI CCGCTC 1 cut(s) 54
BsrDI GCAATG 3 cut(s) 411, 1131, 1555
BssECI CCNNGG 2 cut(s) 984, 1044
BssMI GATC 8 cut(s) 331, 991, 1293, 1315, 1365, 1521, 1539, 1596
BssNI GRCGYC 1 cut(s) 89
BssT1I CCWWGG 2 cut(s) 984, 1044
Bst2UI CCWGG 1 cut(s) 1506
Bst4CI ACNGT 2 cut(s) 469, 1463
Bst6I CTCTTC 5 cut(s) 638, 906, 1014, 1262, 1425
BstACI GRCGYC 1 cut(s) 89
BstAPI GCANNNNNTGC 1 cut(s) 622
BstBAI YACGTR 1 cut(s) 242
BstBI TTCGAA 1 cut(s) 487
BstC8I GCNNGC 4 cut(s) 586, 801, 923, 1473
BstDEI CTNAG 3 cut(s) 668, 826, 1085
BstDSI CCRYGG 2 cut(s) 984, 1044
BstF5I GGATG 6 cut(s) 15, 75, 559, 814, 1066, 1426
BstFNI CGCG 1 cut(s) 69
BstH2I RGCGCY 2 cut(s) 298, 605
BstHHI GCGC 5 cut(s) 71, 297, 590, 604, 616
BstKTI GATC 8 cut(s) 334, 994, 1296, 1318, 1368, 1524, 1542, 1599
BstMAI GTCTC 2 cut(s) 760, 1315
BstMBI GATC 8 cut(s) 331, 991, 1293, 1315, 1365, 1521, 1539, 1596
BstMWI GCNNNNNNNGC 5 cut(s) 103, 601, 613, 622, 809
BstNI CCWGG 1 cut(s) 1506
BstNSI RCATGY 2 cut(s) 588, 691
BstSCI CCNGG 3 cut(s) 444, 590, 1504
BstSFI CTRYAG 1 cut(s) 1093
BstSLI GKGCMC 1 cut(s) 1081
BstUI CGCG 1 cut(s) 69
BstV1I GCAGC 5 cut(s) 106, 149, 591, 686, 1297
BstX2I RGATCY 2 cut(s) 1521, 1539
BstXI CCANNNNNNTGG 1 cut(s) 1051
BstYI RGATCY 2 cut(s) 1521, 1539
BsuI GTATCC 1 cut(s) 1435
BsuRI GGCC 3 cut(s) 132, 1043, 1481
BtgI CCRYGG 2 cut(s) 984, 1044
BtgZI GCGATG 1 cut(s) 785
BtsCI GGATG 6 cut(s) 15, 75, 559, 814, 1066, 1426
BtsI GCAGTG 1 cut(s) 579
BtsIMutI CAGTG 4 cut(s) 465, 579, 1093, 1468
Cac8I GCNNGC 4 cut(s) 586, 801, 923, 1473
CaiI CAGNNNCTG 1 cut(s) 1092
CciI TCATGA 1 cut(s) 1546
CfoI GCGC 5 cut(s) 71, 297, 590, 604, 616
Cfr13I GGNCC 2 cut(s) 131, 1374
CseI GACGC 1 cut(s) 97
Csp6I GTAC 3 cut(s) 26, 691, 949
CviAII CATG 7 cut(s) 29, 170, 585, 688, 985, 1045, 1547
CviQI GTAC 3 cut(s) 26, 691, 949
DdeI CTNAG 3 cut(s) 668, 826, 1085
DpnI GATC 8 cut(s) 333, 993, 1295, 1317, 1367, 1523, 1541, 1598
DpnII GATC 8 cut(s) 331, 991, 1293, 1315, 1365, 1521, 1539, 1596
Eam1104I CTCTTC 5 cut(s) 638, 906, 1014, 1262, 1425
EarI CTCTTC 5 cut(s) 638, 906, 1014, 1262, 1425
EciI GGCGGA 1 cut(s) 46
Ecl136II GAGCTC 1 cut(s) 537
Eco130I CCWWGG 2 cut(s) 984, 1044
Eco24I GRGCYC 1 cut(s) 539
Eco47I GGWCC 1 cut(s) 1374
Eco47III AGCGCT 2 cut(s) 296, 603
Eco53kI GAGCTC 1 cut(s) 537
Eco57I CTGAAG 1 cut(s) 119
Eco72I CACGTG 1 cut(s) 242
EcoICRI GAGCTC 1 cut(s) 537
EcoRII CCWGG 1 cut(s) 1504
EcoT14I CCWWGG 2 cut(s) 984, 1044
EcoT38I GRGCYC 1 cut(s) 539
ErhI CCWWGG 2 cut(s) 984, 1044
FaeI CATG 7 cut(s) 32, 173, 588, 691, 988, 1048, 1550
FalI AAGNNNNNCTT 2 cut(s) 95, 127
FaqI GGGAC 2 cut(s) 422, 1134
FatI CATG 7 cut(s) 28, 169, 584, 687, 984, 1044, 1546
FbaI TGATCA 2 cut(s) 1315, 1596
Fnu4HI GCNGC 7 cut(s) 92, 95, 130, 138, 605, 675, 1311
FokI GGATG 6 cut(s) 22, 62, 566, 821, 1073, 1433
FriOI GRGCYC 1 cut(s) 539
Fsp4HI GCNGC 7 cut(s) 92, 95, 130, 138, 605, 675, 1311
FspBI CTAG 4 cut(s) 228, 281, 720, 1016
FspI TGCGCA 1 cut(s) 615
GlaI GCGC 5 cut(s) 70, 296, 589, 603, 615
GluI GCNGC 7 cut(s) 92, 95, 130, 138, 605, 675, 1311
GsaI CCCAGC 2 cut(s) 137, 1011
HaeII RGCGCY 2 cut(s) 298, 605
HaeIII GGCC 3 cut(s) 132, 1043, 1481
HapII CCGG 5 cut(s) 446, 523, 551, 592, 1058
HgaI GACGC 1 cut(s) 97
HhaI GCGC 5 cut(s) 71, 297, 590, 604, 616
Hin1I GRCGYC 1 cut(s) 89
Hin1II CATG 7 cut(s) 32, 173, 588, 691, 988, 1048, 1550
Hin6I GCGC 5 cut(s) 69, 295, 588, 602, 614
HinP1I GCGC 5 cut(s) 69, 295, 588, 602, 614
HindIII AAGCTT 2 cut(s) 41, 885
HinfI GANTC 9 cut(s) 62, 200, 231, 370, 790, 857, 1099, 1488, 1615
HpaII CCGG 5 cut(s) 446, 523, 551, 592, 1058
HphI GGTGA 1 cut(s) 1616
Hpy188III TCNNGA 8 cut(s) 503, 523, 817, 1016, 1112, 1519, 1547, 1578
Hpy99I CGWCG 2 cut(s) 88, 91
HpyAV CCTTC 6 cut(s) 270, 287, 887, 1280, 1544, 1628
HpyCH4III ACNGT 2 cut(s) 469, 1463
HpyCH4IV ACGT 1 cut(s) 241
HpyF10VI GCNNNNNNNGC 5 cut(s) 103, 601, 613, 622, 809
HpyF3I CTNAG 3 cut(s) 668, 826, 1085
HpySE526I ACGT 1 cut(s) 241
Hsp92I GRCGYC 1 cut(s) 89
Hsp92II CATG 7 cut(s) 32, 173, 588, 691, 988, 1048, 1550
HspAI GCGC 5 cut(s) 69, 295, 588, 602, 614
Kpn2I TCCGGA 1 cut(s) 522
Ksp22I TGATCA 2 cut(s) 1315, 1596
Kzo9I GATC 8 cut(s) 331, 991, 1293, 1315, 1365, 1521, 1539, 1596
LmnI GCTCC 5 cut(s) 59, 547, 599, 980, 1054
Lsp1109I GCAGC 5 cut(s) 106, 149, 591, 686, 1297
LweI GCATC 1 cut(s) 799
MaeI CTAG 4 cut(s) 228, 281, 720, 1016
MaeII ACGT 1 cut(s) 241
MaeIII GTNAC 7 cut(s) 307, 407, 454, 849, 899, 1399, 1457
MalI GATC 8 cut(s) 333, 993, 1295, 1317, 1367, 1523, 1541, 1598
MbiI CCGCTC 1 cut(s) 54
MboI GATC 8 cut(s) 331, 991, 1293, 1315, 1365, 1521, 1539, 1596
MboII GAAGA 9 cut(s) 49, 112, 652, 655, 923, 1031, 1249, 1279, 1442
MfeI CAATTG 1 cut(s) 343
MflI RGATCY 2 cut(s) 1521, 1539
MhlI GDGCHC 2 cut(s) 539, 1081
MluCI AATT 9 cut(s) 213, 343, 648, 658, 954, 966, 1301, 1447, 1453
MlyI GAGTC 2 cut(s) 56, 1093
MmeI TCCRAC 4 cut(s) 147, 1263, 1335, 1362
MroI TCCGGA 1 cut(s) 522
MseI TTAA 2 cut(s) 177, 777
MslI CAYNNNNRTG 2 cut(s) 750, 1049
MspA1I CMGCKG 2 cut(s) 97, 1372
MspI CCGG 5 cut(s) 446, 523, 551, 592, 1058
MspR9I CCNGG 3 cut(s) 446, 592, 1506
MunI CAATTG 1 cut(s) 343
Mva1269I GAATGC 1 cut(s) 772
MvaI CCWGG 1 cut(s) 1506
MvnI CGCG 1 cut(s) 69
MwoI GCNNNNNNNGC 5 cut(s) 103, 601, 613, 622, 809
NciI CCSGG 2 cut(s) 446, 592
NcoI CCATGG 2 cut(s) 984, 1044
NdeII GATC 8 cut(s) 331, 991, 1293, 1315, 1365, 1521, 1539, 1596
NlaIII CATG 7 cut(s) 32, 173, 588, 691, 988, 1048, 1550
NlaIV GGNNCC 3 cut(s) 549, 982, 1056
NmuCI GTSAC 4 cut(s) 307, 407, 1399, 1457
NsbI TGCGCA 1 cut(s) 615
NspI RCATGY 2 cut(s) 588, 691
NspV TTCGAA 1 cut(s) 487
PaeI GCATGC 1 cut(s) 588
PagI TCATGA 1 cut(s) 1546
PciI ACATGT 1 cut(s) 687
PcsI WCGNNNNNNNCGW 1 cut(s) 493
PctI GAATGC 1 cut(s) 772
PfeI GAWTC 7 cut(s) 200, 231, 370, 790, 857, 1488, 1615
PflFI GACNNNGTC 1 cut(s) 1378
PflMI CCANNNNNTGG 1 cut(s) 1118
PfoI TCCNGGA 1 cut(s) 1504
PkrI GCNGC 7 cut(s) 93, 96, 131, 139, 606, 676, 1312
PleI GAGTC 2 cut(s) 56, 1093
PmaCI CACGTG 1 cut(s) 242
PmlI CACGTG 1 cut(s) 242
PpsI GAGTC 2 cut(s) 56, 1093
Ppu21I YACGTR 1 cut(s) 242
PscI ACATGT 1 cut(s) 687
PshBI ATTAAT 1 cut(s) 777
PsiI TTATAA 1 cut(s) 291
Psp124BI GAGCTC 1 cut(s) 539
Psp6I CCWGG 1 cut(s) 1504
PspCI CACGTG 1 cut(s) 242
PspFI CCCAGC 2 cut(s) 133, 1007
PspGI CCWGG 1 cut(s) 1504
PspN4I GGNNCC 3 cut(s) 549, 982, 1056
PspPI GGNCC 2 cut(s) 131, 1374
PstNI CAGNNNCTG 1 cut(s) 1092
PsuI RGATCY 2 cut(s) 1521, 1539
PsyI GACNNNGTC 1 cut(s) 1378
PvuII CAGCTG 1 cut(s) 97
RsaI GTAC 3 cut(s) 27, 692, 950
RsaNI GTAC 3 cut(s) 26, 691, 949
RseI CAYNNNNRTG 2 cut(s) 750, 1049
SacI GAGCTC 1 cut(s) 539
SaqAI TTAA 2 cut(s) 177, 777
SatI GCNGC 7 cut(s) 92, 95, 130, 138, 605, 675, 1311
Sau3AI GATC 8 cut(s) 331, 991, 1293, 1315, 1365, 1521, 1539, 1596
Sau96I GGNCC 2 cut(s) 131, 1374
SchI GAGTC 2 cut(s) 56, 1093
ScrFI CCNGG 3 cut(s) 446, 592, 1506
SduI GDGCHC 2 cut(s) 539, 1081
SfaNI GCATC 1 cut(s) 799
SfcI CTRYAG 1 cut(s) 1093
SfuI TTCGAA 1 cut(s) 487
SinI GGWCC 1 cut(s) 1374
SmiMI CAYNNNNRTG 2 cut(s) 750, 1049
SmlI CTYRAG 1 cut(s) 1277
SmoI CTYRAG 1 cut(s) 1277
SphI GCATGC 1 cut(s) 588
Sse9I AATT 9 cut(s) 213, 343, 648, 658, 954, 966, 1301, 1447, 1453
SsiI CCGC 7 cut(s) 21, 52, 57, 92, 129, 204, 1372
SspMI CTAG 4 cut(s) 228, 281, 720, 1016
SstI GAGCTC 1 cut(s) 539
StyD4I CCNGG 3 cut(s) 444, 590, 1504
StyI CCWWGG 2 cut(s) 984, 1044
TaaI ACNGT 2 cut(s) 469, 1463
TaiI ACGT 1 cut(s) 244
TaqI TCGA 5 cut(s) 83, 330, 381, 487, 816
TasI AATT 9 cut(s) 213, 343, 648, 658, 954, 966, 1301, 1447, 1453
TatI WGTACW 2 cut(s) 25, 690
TauI GCSGC 2 cut(s) 94, 132
TfiI GAWTC 7 cut(s) 200, 231, 370, 790, 857, 1488, 1615
Tru1I TTAA 2 cut(s) 177, 777
Tru9I TTAA 2 cut(s) 177, 777
TscAI CASTG 4 cut(s) 472, 586, 1093, 1468
TseFI GTSAC 4 cut(s) 307, 407, 1399, 1457
TseI GCWGC 5 cut(s) 94, 137, 604, 674, 1310
Tsp45I GTSAC 4 cut(s) 307, 407, 1399, 1457
TspDTI ATGAA 2 cut(s) 653, 1250
TspGWI ACGGA 1 cut(s) 993
TspRI CASTG 4 cut(s) 472, 586, 1093, 1468
Tth111I GACNNNGTC 1 cut(s) 1378
Van91I CCANNNNNTGG 1 cut(s) 1118
VpaK11BI GGWCC 1 cut(s) 1374
VspI ATTAAT 1 cut(s) 777
XapI RAATTY 2 cut(s) 658, 1447
XbaI TCTAGA 1 cut(s) 1015
XceI RCATGY 2 cut(s) 588, 691
XcmI CCANNNNNNNNNTGG 1 cut(s) 1634
XspI CTAG 4 cut(s) 228, 281, 720, 1016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.