Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0003447

Physical Location & Seq

Genomic Coordinates Reverse (-)

17662061 .. 17674249

Gene Structure 12189 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0202000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGTTTCCATTTTTCTGTTACCACTCTTCGTTCTCCTTCATATTATTCTTTTGCTTACTCTTTCTTTCCCGCCCATGCTTTCCCGCCAGAATCCTACCCGACCCTGCGGTAACAGTCATAACTGCGACGGCCAAAGTGTCCCACAACGCCACGTGGCACGACTTCACGAAGTTCCTGGACGCCGGGAAGGGCAGCCAGGTGGTCGGCATGTCGGAGCTCAAGAAGTACTTCAGCCGTTTCGGCTACTTACCGGTGCCCGAAAAGACCAACTTCACCGACGTCTTCGACAAGCAGCTCGAATCGGCCCTGACTCTATACCAATCCAGGTTGAGCTTGCCCGTCACGGGAAAGCTTGACCCGGAAACCATCTCGGCCATCACTTCACCGAGATGCGGGGTCAGCGACGCGCCGCAGCAGCAACATACGCCCGCGAAGCTGCATGCGACGCGTCGTTATGCTTACTTCAACGGGAAGCCTCGCTGGGCTCCGGCGAAGTTGCTCACGTATGCCATCAACCCCAAACACGTTATCAGCTACGTGAGCTCGTCGGACATAGAGACAATATTCCACCGCGCTTTTTCGCGGTGGTCGGCTGTGATTCCGGTGAACTTCACCAAAGCCAGGGACTACTCCTCCGCCGACATCAAAATCGGGTTTTACAAAGGTGATCACGGCGACGGTGAGCCGTTCGATGGTGTCCTGGGTGTTCTAGCTCACGCTTTCTCTCCCGAGAACGGGAGGTTCCATCTCGACGCAGAGGAATCATGGGCCGTAGATTTCGAATCCGACAAGTCGAAGGTGGCCGTGGATTTGGACTCCGTGGCGACCCATGAGATTGGGCATCTTCTTGGGTTGGCTCACTCCTCGGTCAAGGATGCTGTCATGTATCCGAGTCTGAGTCCTAGGACTAAGAAGGTGGACCTCCAAATGGATGACGTGGCAGGCGTTCAGGCACTCTATGGGTCAAATCCTAATTTCAAATTTAGCTCATTGCAGTCGGAAAATTCTTACAACCACGCAATCTCAATTCTCCACCCTCACATCCCTCCAATGGCTTCCGCCTGCAGACAATTCGCCAGCAGAGCATCCCTATCGTCCATCCGATCCGCCATCAGATCCAACGCCCCTAAATCCCCCTCCTCACGCTTCCCCCTCCCCACCTCCGCCCCCTCCTCCGCTCCAGTTCGCGGCTTCTCAATCTCCAGGTCTACGGGCGTGTTGGGATGCGTGCAGTCGCTGCTGCCGCTCCACAGCGCGGTGGCGGCGGCGAGGCTGACGTCAGCGCTGAGCACAACTTCGAGGAGTTGCCGGGCGCTCTCACAGGGTACTCTCTGCCGCACCTCTCCCAGCCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004372 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006730 GO:0008150 GO:0008152 GO:0009987 GO:0016740 GO:0016741 GO:0016742 GO:0044237 GO:0044281 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00260 ko00460 ko00630 ko00670 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko01523 map00260 map00460 map00630 map00670 map00680 map01100 map01110 map01120 map01130 map01200 map01230 map01523

Pfam Domains

Protein Families

SHMT

Protein Analysis

451

Amino Acids

49.28

Weight (kDa)

9.29

Isoelectric Point (pI)

53.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PG_binding_1	PF01471	71 - 126	1.7e-11	Putative peptidoglycan binding domain
Peptidase_M10	PF00413	161 - 321	2.7e-51	Matrixin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G22200 AT4G22200
fragaria_vesca	FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980
malus_domestica	MD08G1236000.v1.1
prunus_persica	Prupe.1G572200_v2.0.a1 Prupe.1G572200_v2.0.a1 Prupe.1G572200_v2.0.a1
pyrus_communis	pycom08g20420
rosa_chinensis	RchiOBHm_Chr7g0221301 RchiOBHm_Chr7g0222541
rosa_laevigata	RLG00000002163
rosa_multiflora	Rmu_co8307231.1_g000001 Rmu_sc0000324.1_g000021
rosa_roxburghii	Rroxscaffold_3G00238430
rosa_rugosa	Rorug07G0202000
rosa_samantha	Rh6BG194600 Rh7AG341200 Rh7AG352200 Rh7BG332200 Rh7CG359100 Rh7CG369500 Rh7DG339700
rosa_wichuraiana	Rw7G029020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	282, 1280
AccB1I	GGYRCC	1 cut(s)	253
AccBSI	CCGCTC	2 cut(s)	1178, 1246
AccI	GTMKAC	1 cut(s)	1208
AccII	CGCG	7 cut(s)	407, 431, 448, 573, 583, 1188, 1256
AclWI	GGATC	2 cut(s)	1098, 1110
AcoI	YGGCCR	3 cut(s)	129, 372, 801
AcsI	RAATTY	2 cut(s)	980, 1003
AcuI	CTGAAG	1 cut(s)	214
AcvI	CACGTG	1 cut(s)	153
AcyI	GRCGYC	3 cut(s)	180, 279, 1277
AfaI	GTAC	2 cut(s)	227, 1327
AfeI	AGCGCT	1 cut(s)	1284
AflIII	ACRYGT	2 cut(s)	446, 523
AgeI	ACCGGT	1 cut(s)	250
AgsI	TTSAA	2 cut(s)	466, 979
AjiI	CACGTC	1 cut(s)	937
AjnI	CCWGG	6 cut(s)	174, 195, 323, 620, 699, 1202
AluBI	AGCT	9 cut(s)	217, 295, 333, 352, 436, 534, 543, 713, 987
AluI	AGCT	9 cut(s)	217, 295, 333, 352, 436, 534, 543, 713, 987
Alw21I	GWGCWC	3 cut(s)	219, 545, 1292
Alw26I	GTCTC	1 cut(s)	551
AlwI	GGATC	2 cut(s)	1098, 1110
AlwNI	CAGNNNCTG	1 cut(s)	1237
Ama87I	CYCGRG	1 cut(s)	728
Aor51HI	AGCGCT	1 cut(s)	1284
AoxI	GGCC	5 cut(s)	129, 303, 372, 768, 801
ApeKI	GCWGC	7 cut(s)	192, 292, 412, 415, 436, 1237, 1240
ApoI	RAATTY	2 cut(s)	980, 1003
AsiGI	ACCGGT	1 cut(s)	250
Asp700I	GAANNNNTTC	1 cut(s)	227
AspA2I	CCTAGG	1 cut(s)	902
AspLEI	GCGC	5 cut(s)	409, 575, 1256, 1285, 1315
AspS9I	GGNCC	3 cut(s)	304, 768, 919
AsuC2I	CCSGG	3 cut(s)	184, 359, 1310
AsuHPI	GGTGA	6 cut(s)	265, 375, 604, 616, 677, 692
AsuII	TTCGAA	1 cut(s)	780
AvaI	CYCGRG	1 cut(s)	728
AvaII	GGWCC	1 cut(s)	919
AvrII	CCTAGG	1 cut(s)	902
BaeGI	GKGCMC	1 cut(s)	258
BanI	GGYRCC	1 cut(s)	253
BanII	GRGCYC	3 cut(s)	219, 487, 545
BbrPI	CACGTG	1 cut(s)	153
BbsI	GAAGAC	1 cut(s)	274
Bbv12I	GWGCWC	3 cut(s)	219, 545, 1292
BbvI	GCAGC	7 cut(s)	204, 304, 423, 424, 427, 1224, 1227
BccI	CCATC	7 cut(s)	374, 383, 518, 686, 753, 1106, 1118
BceAI	ACGGC	6 cut(s)	144, 219, 670, 688, 755, 788
BcgI	CGANNNNNNTGC	4 cut(s)	1054, 1074, 1088, 1108
BciT130I	CCWGG	6 cut(s)	176, 197, 325, 622, 701, 1204
BciVI	GTATCC	1 cut(s)	897
BclI	TGATCA	1 cut(s)	667
BcnI	CCSGG	3 cut(s)	184, 359, 1310
BcoDI	GTCTC	1 cut(s)	551
BfaI	CTAG	2 cut(s)	710, 903
BfmI	CTRYAG	1 cut(s)	1063
BfoI	RGCGCY	2 cut(s)	1286, 1316
BfuI	GTATCC	1 cut(s)	897
BglI	GCCNNNNNGGC	1 cut(s)	240
BlnI	CCTAGG	1 cut(s)	902
BlpI	GCTNAGC	1 cut(s)	1286
BmcAI	AGTACT	1 cut(s)	227
Bme1390I	CCNGG	9 cut(s)	176, 184, 197, 325, 359, 622, 701, 1204, 1310
Bme18I	GGWCC	1 cut(s)	919
BmeT110I	CYCGRG	1 cut(s)	728
BmgBI	CACGTC	1 cut(s)	937
BmgT120I	GGNCC	3 cut(s)	304, 768, 919
BmiI	GGNNCC	3 cut(s)	255, 486, 743
BmrFI	CCNGG	9 cut(s)	176, 184, 197, 325, 359, 622, 701, 1204, 1310
BmsI	GCATC	5 cut(s)	380, 850, 865, 1094, 1214
BpiI	GAAGAC	1 cut(s)	274
BpmI	CTGGAG	2 cut(s)	1164, 1186
Bpu1102I	GCTNAGC	1 cut(s)	1286
Bpu14I	TTCGAA	1 cut(s)	780
BpuEI	CTTGAG	1 cut(s)	203
BpuMI	CCSGG	3 cut(s)	184, 359, 1310
BsaAI	YACGTR	3 cut(s)	153, 504, 538
BsaHI	GRCGYC	3 cut(s)	180, 279, 1277
BsaJI	CCNNGG	6 cut(s)	621, 700, 804, 819, 864, 902
BsaWI	WCCGGW	2 cut(s)	250, 601
BsaXI	ACNNNNNCTCC	2 cut(s)	617, 647
Bse118I	RCCGGY	1 cut(s)	250
Bse1I	ACTGG	1 cut(s)	1181
Bse3DI	GCAATG	1 cut(s)	989
BseBI	CCWGG	6 cut(s)	176, 197, 325, 622, 701, 1204
BseDI	CCNNGG	6 cut(s)	621, 700, 804, 819, 864, 902
BseGI	GGATG	6 cut(s)	880, 937, 1041, 1085, 1098, 1229
BseMI	GCAATG	1 cut(s)	989
BseMII	CTCAG	2 cut(s)	887, 1277
BseNI	ACTGG	1 cut(s)	1181
BseRI	GAGGAG	5 cut(s)	622, 853, 1129, 1162, 1315
BseSI	GKGCMC	1 cut(s)	258
BseXI	GCAGC	7 cut(s)	204, 304, 423, 424, 427, 1224, 1227
BseYI	CCCAGC	2 cut(s)	480, 1346
BsgI	GTGCAG	1 cut(s)	1250
Bsh1236I	CGCG	7 cut(s)	407, 431, 448, 573, 583, 1188, 1256
BshFI	GGCC	5 cut(s)	131, 305, 374, 770, 803
BshNI	GGYRCC	1 cut(s)	253
BshTI	ACCGGT	1 cut(s)	250
BsiHKAI	GWGCWC	3 cut(s)	219, 545, 1292
BsiHKCI	CYCGRG	1 cut(s)	728
BsiSI	CCGG	6 cut(s)	183, 251, 359, 488, 602, 1309
BslFI	GGGAC	2 cut(s)	124, 638
BsmAI	GTCTC	1 cut(s)	551
BsmFI	GGGAC	2 cut(s)	124, 638
BsnI	GGCC	5 cut(s)	131, 305, 374, 770, 803
BsoBI	CYCGRG	1 cut(s)	728
Bsp119I	TTCGAA	1 cut(s)	780
Bsp1286I	GDGCHC	5 cut(s)	219, 258, 487, 545, 1292
Bsp143I	GATC	3 cut(s)	667, 1103, 1115
Bsp1720I	GCTNAGC	1 cut(s)	1286
BspANI	GGCC	5 cut(s)	131, 305, 374, 770, 803
BspCNI	CTCAG	2 cut(s)	888, 1278
BspFNI	CGCG	7 cut(s)	407, 431, 448, 573, 583, 1188, 1256
BspLI	GGNNCC	3 cut(s)	255, 486, 743
BspMAI	CTGCAG	1 cut(s)	1067
BspPI	GGATC	2 cut(s)	1098, 1110
BspT104I	TTCGAA	1 cut(s)	780
BspT107I	GGYRCC	1 cut(s)	253
BsrBI	CCGCTC	2 cut(s)	1178, 1246
BsrDI	GCAATG	1 cut(s)	989
BsrFI	RCCGGY	1 cut(s)	250
BsrI	ACTGG	1 cut(s)	1181
BssAI	RCCGGY	1 cut(s)	250
BssECI	CCNNGG	6 cut(s)	621, 700, 804, 819, 864, 902
BssMI	GATC	3 cut(s)	667, 1103, 1115
BssNI	GRCGYC	3 cut(s)	180, 279, 1277
BssT1I	CCWWGG	1 cut(s)	902
Bst2UI	CCWGG	6 cut(s)	176, 197, 325, 622, 701, 1204
Bst4CI	ACNGT	2 cut(s)	115, 680
Bst6I	CTCTTC	1 cut(s)	31
BstACI	GRCGYC	3 cut(s)	180, 279, 1277
BstAPI	GCANNNNNTGC	1 cut(s)	1237
BstBAI	YACGTR	3 cut(s)	153, 504, 538
BstBI	TTCGAA	1 cut(s)	780
BstC8I	GCNNGC	7 cut(s)	335, 429, 441, 943, 1063, 1078, 1229
BstDEI	CTNAG	3 cut(s)	896, 909, 1286
BstDSI	CCRYGG	2 cut(s)	804, 819
BstF5I	GGATG	6 cut(s)	880, 937, 1041, 1085, 1098, 1229
BstFNI	CGCG	7 cut(s)	407, 431, 448, 573, 583, 1188, 1256
BstH2I	RGCGCY	2 cut(s)	1286, 1316
BstHHI	GCGC	5 cut(s)	409, 575, 1256, 1285, 1315
BstKTI	GATC	3 cut(s)	670, 1106, 1118
BstMAI	GTCTC	1 cut(s)	551
BstMBI	GATC	3 cut(s)	667, 1103, 1115
BstNI	CCWGG	6 cut(s)	176, 197, 325, 622, 701, 1204
BstNSI	RCATGY	2 cut(s)	211, 443
BstSCI	CCNGG	9 cut(s)	174, 182, 195, 323, 357, 620, 699, 1202, 1308
BstSFI	CTRYAG	1 cut(s)	1063
BstSLI	GKGCMC	1 cut(s)	258
BstUI	CGCG	7 cut(s)	407, 431, 448, 573, 583, 1188, 1256
BstV1I	GCAGC	7 cut(s)	204, 304, 423, 424, 427, 1224, 1227
BstV2I	GAAGAC	1 cut(s)	274
BstX2I	RGATCY	1 cut(s)	1115
BstXI	CCANNNNNNTGG	1 cut(s)	836
BstYI	RGATCY	1 cut(s)	1115
BsuI	GTATCC	1 cut(s)	897
BsuRI	GGCC	5 cut(s)	131, 305, 374, 770, 803
BtgI	CCRYGG	2 cut(s)	804, 819
BtrI	CACGTC	1 cut(s)	937
BtsCI	GGATG	6 cut(s)	880, 937, 1041, 1085, 1098, 1229
Cac8I	GCNNGC	7 cut(s)	335, 429, 441, 943, 1063, 1078, 1229
CaiI	CAGNNNCTG	1 cut(s)	1237
CfoI	GCGC	5 cut(s)	409, 575, 1256, 1285, 1315
Cfr10I	RCCGGY	1 cut(s)	250
Cfr13I	GGNCC	3 cut(s)	304, 768, 919
CseI	GACGC	5 cut(s)	188, 413, 437, 454, 761
Csp6I	GTAC	2 cut(s)	226, 1326
CspAI	ACCGGT	1 cut(s)	250
CviAII	CATG	6 cut(s)	75, 208, 440, 765, 830, 883
CviQI	GTAC	2 cut(s)	226, 1326
DdeI	CTNAG	3 cut(s)	896, 909, 1286
DpnI	GATC	3 cut(s)	669, 1105, 1117
DpnII	GATC	3 cut(s)	667, 1103, 1115
EaeI	YGGCCR	3 cut(s)	129, 372, 801
Eam1104I	CTCTTC	1 cut(s)	31
EarI	CTCTTC	1 cut(s)	31
EciI	GGCGGA	4 cut(s)	625, 1048, 1096, 1153
Ecl136II	GAGCTC	2 cut(s)	217, 543
Eco130I	CCWWGG	1 cut(s)	902
Eco24I	GRGCYC	3 cut(s)	219, 487, 545
Eco47I	GGWCC	1 cut(s)	919
Eco47III	AGCGCT	1 cut(s)	1284
Eco53kI	GAGCTC	2 cut(s)	217, 543
Eco57I	CTGAAG	1 cut(s)	214
Eco72I	CACGTG	1 cut(s)	153
Eco88I	CYCGRG	1 cut(s)	728
EcoICRI	GAGCTC	2 cut(s)	217, 543
EcoRII	CCWGG	6 cut(s)	174, 195, 323, 620, 699, 1202
EcoT14I	CCWWGG	1 cut(s)	902
EcoT38I	GRGCYC	3 cut(s)	219, 487, 545
ErhI	CCWWGG	1 cut(s)	902
FaeI	CATG	6 cut(s)	78, 211, 443, 768, 833, 886
FalI	AAGNNNNNCTT	4 cut(s)	212, 244, 254, 286
FaqI	GGGAC	2 cut(s)	124, 638
FatI	CATG	6 cut(s)	74, 207, 439, 764, 829, 882
FauI	CCCGC	4 cut(s)	77, 91, 386, 436
FbaI	TGATCA	1 cut(s)	667
FblI	GTMKAC	1 cut(s)	1208
FokI	GGATG	6 cut(s)	887, 944, 1028, 1072, 1085, 1236
FriOI	GRGCYC	3 cut(s)	219, 487, 545
FspBI	CTAG	2 cut(s)	710, 903
GlaI	GCGC	5 cut(s)	408, 574, 1255, 1284, 1314
GsaI	CCCAGC	2 cut(s)	484, 1350
GsuI	CTGGAG	2 cut(s)	1164, 1186
HaeII	RGCGCY	2 cut(s)	1286, 1316
HaeIII	GGCC	5 cut(s)	131, 305, 374, 770, 803
HapII	CCGG	6 cut(s)	183, 251, 359, 488, 602, 1309
HgaI	GACGC	5 cut(s)	188, 413, 437, 454, 761
HhaI	GCGC	5 cut(s)	409, 575, 1256, 1285, 1315
Hin1I	GRCGYC	3 cut(s)	180, 279, 1277
Hin1II	CATG	6 cut(s)	78, 211, 443, 768, 833, 886
Hin6I	GCGC	5 cut(s)	407, 573, 1254, 1283, 1313
HinP1I	GCGC	5 cut(s)	407, 573, 1254, 1283, 1313
HindIII	AAGCTT	1 cut(s)	350
HinfI	GANTC	9 cut(s)	90, 299, 310, 598, 761, 782, 815, 892, 898
HpaII	CCGG	6 cut(s)	183, 251, 359, 488, 602, 1309
HphI	GGTGA	6 cut(s)	265, 375, 604, 616, 677, 692
Hpy166II	GTNNAC	3 cut(s)	607, 919, 1209
Hpy188I	TCNGA	8 cut(s)	214, 550, 787, 891, 897, 1000, 1103, 1115
Hpy188III	TCNNGA	4 cut(s)	166, 220, 728, 749
Hpy8I	GTNNAC	3 cut(s)	607, 919, 1209
Hpy99I	CGWCG	8 cut(s)	130, 281, 407, 448, 453, 550, 680, 755
HpyAV	CCTTC	4 cut(s)	46, 181, 790, 907
HpyCH4III	ACNGT	2 cut(s)	115, 680
HpyCH4IV	ACGT	7 cut(s)	152, 279, 503, 525, 537, 936, 1277
HpyCH4V	TGCA	4 cut(s)	439, 994, 1065, 1231
HpyF3I	CTNAG	3 cut(s)	896, 909, 1286
HpySE526I	ACGT	7 cut(s)	152, 279, 503, 525, 537, 936, 1277
Hsp92I	GRCGYC	3 cut(s)	180, 279, 1277
Hsp92II	CATG	6 cut(s)	78, 211, 443, 768, 833, 886
HspAI	GCGC	5 cut(s)	407, 573, 1254, 1283, 1313
Ksp22I	TGATCA	1 cut(s)	667
Kzo9I	GATC	3 cut(s)	667, 1103, 1115
LmnI	GCTCC	4 cut(s)	214, 490, 1183, 1251
Lsp1109I	GCAGC	7 cut(s)	204, 304, 423, 424, 427, 1224, 1227
LweI	GCATC	5 cut(s)	380, 850, 865, 1094, 1214
MaeI	CTAG	2 cut(s)	710, 903
MaeII	ACGT	7 cut(s)	152, 279, 503, 525, 537, 936, 1277
MaeIII	GTNAC	3 cut(s)	17, 109, 340
MalI	GATC	3 cut(s)	669, 1105, 1117
MbiI	CCGCTC	2 cut(s)	1178, 1246
MboI	GATC	3 cut(s)	667, 1103, 1115
MboII	GAAGA	3 cut(s)	18, 274, 836
MflI	RGATCY	1 cut(s)	1115
MhlI	GDGCHC	5 cut(s)	219, 258, 487, 545, 1292
MluCI	AATT	5 cut(s)	973, 980, 1003, 1026, 1070
MluI	ACGCGT	1 cut(s)	446
MlyI	GAGTC	4 cut(s)	304, 809, 901, 907
MmeI	TCCRAC	5 cut(s)	192, 528, 810, 978, 1143
MroXI	GAANNNNTTC	1 cut(s)	227
MslI	CAYNNNNRTG	1 cut(s)	388
MspI	CCGG	6 cut(s)	183, 251, 359, 488, 602, 1309
MspR9I	CCNGG	9 cut(s)	176, 184, 197, 325, 359, 622, 701, 1204, 1310
MvaI	CCWGG	6 cut(s)	176, 197, 325, 622, 701, 1204
MvnI	CGCG	7 cut(s)	407, 431, 448, 573, 583, 1188, 1256
NciI	CCSGG	3 cut(s)	184, 359, 1310
NdeII	GATC	3 cut(s)	667, 1103, 1115
NlaIII	CATG	6 cut(s)	78, 211, 443, 768, 833, 886
NlaIV	GGNNCC	3 cut(s)	255, 486, 743
NmeAIII	GCCGAG	1 cut(s)	350
NmuCI	GTSAC	1 cut(s)	340
NspI	RCATGY	2 cut(s)	211, 443
NspV	TTCGAA	1 cut(s)	780
PaeI	GCATGC	1 cut(s)	443
PcsI	WCGNNNNNNNCGW	1 cut(s)	942
PdmI	GAANNNNTTC	1 cut(s)	227
PfeI	GAWTC	5 cut(s)	90, 299, 598, 761, 782
PfoI	TCCNGGA	1 cut(s)	174
PinAI	ACCGGT	1 cut(s)	250
PleI	GAGTC	4 cut(s)	304, 809, 900, 906
PmaCI	CACGTG	1 cut(s)	153
PmlI	CACGTG	1 cut(s)	153
PpsI	GAGTC	4 cut(s)	304, 809, 900, 906
Ppu21I	YACGTR	3 cut(s)	153, 504, 538
Psp124BI	GAGCTC	2 cut(s)	219, 545
Psp6I	CCWGG	6 cut(s)	174, 195, 323, 620, 699, 1202
PspCI	CACGTG	1 cut(s)	153
PspFI	CCCAGC	2 cut(s)	480, 1346
PspGI	CCWGG	6 cut(s)	174, 195, 323, 620, 699, 1202
PspN4I	GGNNCC	3 cut(s)	255, 486, 743
PspPI	GGNCC	3 cut(s)	304, 768, 919
PstI	CTGCAG	1 cut(s)	1067
PstNI	CAGNNNCTG	1 cut(s)	1237
PsuI	RGATCY	1 cut(s)	1115
RsaI	GTAC	2 cut(s)	227, 1327
RsaNI	GTAC	2 cut(s)	226, 1326
RseI	CAYNNNNRTG	1 cut(s)	388
SacI	GAGCTC	2 cut(s)	219, 545
Sau3AI	GATC	3 cut(s)	667, 1103, 1115
Sau96I	GGNCC	3 cut(s)	304, 768, 919
ScaI	AGTACT	1 cut(s)	227
SchI	GAGTC	4 cut(s)	304, 809, 901, 907
ScrFI	CCNGG	9 cut(s)	176, 184, 197, 325, 359, 622, 701, 1204, 1310
SduI	GDGCHC	5 cut(s)	219, 258, 487, 545, 1292
SfaNI	GCATC	5 cut(s)	380, 850, 865, 1094, 1214
SfcI	CTRYAG	1 cut(s)	1063
SfuI	TTCGAA	1 cut(s)	780
SinI	GGWCC	1 cut(s)	919
SmiMI	CAYNNNNRTG	1 cut(s)	388
SmlI	CTYRAG	1 cut(s)	218
SmoI	CTYRAG	1 cut(s)	218
SphI	GCATGC	1 cut(s)	443
Sse9I	AATT	5 cut(s)	973, 980, 1003, 1026, 1070
SspI	AATATT	1 cut(s)	564
SspMI	CTAG	2 cut(s)	710, 903
SstI	GAGCTC	2 cut(s)	219, 545
StyD4I	CCNGG	9 cut(s)	174, 182, 195, 323, 357, 620, 699, 1202, 1308
StyI	CCWWGG	1 cut(s)	902
TaaI	ACNGT	2 cut(s)	115, 680
TaiI	ACGT	7 cut(s)	155, 282, 506, 528, 540, 939, 1280
TaqI	TCGA	7 cut(s)	285, 297, 690, 750, 780, 794, 1298
TaqII	GACCGA	1 cut(s)	856
TasI	AATT	5 cut(s)	973, 980, 1003, 1026, 1070
TatI	WGTACW	1 cut(s)	225
TauI	GCSGC	6 cut(s)	412, 1191, 1246, 1265, 1268, 1338
TfiI	GAWTC	5 cut(s)	90, 299, 598, 761, 782
TseFI	GTSAC	1 cut(s)	340
TseI	GCWGC	7 cut(s)	192, 292, 412, 415, 436, 1237, 1240
Tsp45I	GTSAC	1 cut(s)	340
TspDTI	ATGAA	1 cut(s)	28
TspGWI	ACGGA	1 cut(s)	808
VpaK11BI	GGWCC	1 cut(s)	919
XapI	RAATTY	2 cut(s)	980, 1003
XceI	RCATGY	2 cut(s)	211, 443
XmaJI	CCTAGG	1 cut(s)	902
XmiI	GTMKAC	1 cut(s)	1208
XmnI	GAANNNNTTC	1 cut(s)	227
XspI	CTAG	2 cut(s)	710, 903
ZraI	GACGTC	2 cut(s)	280, 1278
ZrmI	AGTACT	1 cut(s)	227

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.