Rh7CG369500

Potassium channel

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
46396312 .. 46398679
2368 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG369500.1

Sequence Viewer

Length: 1305 bp
ATGGTTTGTTATGATTTGGCATCAACCCTCCCCTTTGAGGTCATAGGCGAACACAAACTCGGTCTCTCCTACTCTCTCTTGGGATTGCTCCGATTTTGGCGTTTGAGACGAGCAAAGCAACTCTTCACAAGGCTTGAGAAGGACATCAGGTTTAGCTACTTCTGGGTCAGATGCGCCAGGCTTTTATCTGTGACACTGTTTTCAGTACATTGTGCTGGGTGCCTGTACTACCTGCTAGCAGACCGATACCCGCACCAAGGGAGGACATGGATTGGAGCTGTTATTCCCAATTTCAGAGAGACGAGTATGTGGATCCGCTACATTTCAGCCCTTTACCGGTCCATCACCACCATGTCCACCATTGGTTATGGTGACCTCCATGCAGTGAACACCATGGAAATGATCTTCATCATTTTATACATGCTTTTCAACCTCGGCCTTACTGCTTACCTAATTGGCAACATGACAAACTTAGTTGTTGAAGGCACTCGCCGTACCATGGAATTTAGAAACAGCGTTGAAGCAGCATCAAACTTTGTTGACCGGAATCGCTTGCCTCCAAGGTTGAAGGATCAAATTCTGGCCTATATTTGCTTGAGATTTAAGGCTGAGAGCTTGAACCAGCAGCAAATAATTGAACAGCTCCCCAAGGCAATTTGTAAAAGCATCTGTCAACATTTGTTCCTGCCAACAGTAGAGAAAGTTTATCTTTTCAAGGGTGTCTCAAGGGAAATACTTCTAATTCTGGTTGCAAACATGAAGGCAGAGTACATACCACCAAGAGAAGATGTTGTAATGCAAAACGAAGCACCCGATGATATATACATCATTGTTTCTGGAGAAGTGGAAATCATTGATTGTGAGATGGATAAAGAGCTAGTCGTCGGGACTTTGAAATCTGGGGACATGTTTGGAGAAGTAGGTGCACTTTGTTGCCGAGAAGTTGGTGCATTTTGTTGTAGGCCTCAAAGCTTTACATATGGAACAAAAACACTTTCACAACTCTTGAGAATCAAAACCACTGCACTAATAGAAGCAATGCAGACCAAACAAGAAGACAATGCTCAAATGCTTAAGAACTTCAAGCAGCATCACAAAAAGTTCAGGGATCTGAGAATTGGAGAAATACCGGCTGAGAGTGGGGAAGATGAGGCCATGGGTGATCCAAATTTATCATTCGACTTGTTGACTCTTGCCAGCAAAGGGAATGCTGCACTTCTTGAAGAGCTTCTCAAGTCAAAGTTGAATCCTGACATTGGAGACTCCAAAGGAAGAACACCTCTGGTATATTTCTTCGATTTCTAG

Protein Analysis

434

Amino Acids

49.64

Weight (kDa)

7.9

Isoelectric Point (pI)

27.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 3 - 166 2.2e-25 Ion transport protein
Ion_trans_2 PF07885 90 - 160 4.3e-12 Ion channel
cNMP_binding PF00027 257 - 349 1.6e-10 Cyclic nucleotide-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 240
AccB1I GGYRCC 1 cut(s) 219
AciI CCGC 2 cut(s) 251, 316
AclWI GGATC 5 cut(s) 307, 320, 579, 1116, 1157
AcsI RAATTY 3 cut(s) 503, 576, 1168
AfaI GTAC 4 cut(s) 207, 227, 496, 770
AfiI CCNNNNNNNGG 6 cut(s) 37, 257, 336, 499, 1203, 1256
AflII CTTAAG 1 cut(s) 1073
AflIII ACRYGT 1 cut(s) 906
AgeI ACCGGT 1 cut(s) 336
AjnI CCWGG 1 cut(s) 176
AluBI AGCT 7 cut(s) 156, 278, 615, 643, 877, 972, 1228
AluI AGCT 7 cut(s) 156, 278, 615, 643, 877, 972, 1228
Alw21I GWGCWC 1 cut(s) 928
Alw26I GTCTC 5 cut(s) 68, 100, 293, 727, 1254
Alw44I GTGCAC 1 cut(s) 924
AlwI GGATC 5 cut(s) 307, 320, 579, 1116, 1157
AoxI GGCC 4 cut(s) 436, 582, 962, 1152
ApaLI GTGCAC 1 cut(s) 924
ApeKI GCWGC 4 cut(s) 524, 625, 1087, 1211
ApoI RAATTY 3 cut(s) 503, 576, 1168
AsiGI ACCGGT 1 cut(s) 336
Asp700I GAANNNNTTC 2 cut(s) 735, 1227
AspLEI GCGC 1 cut(s) 176
AspS9I GGNCC 1 cut(s) 339
AsuHPI GGTGA 3 cut(s) 337, 383, 1172
AsuNHI GCTAGC 1 cut(s) 235
AvaII GGWCC 1 cut(s) 339
BaeGI GKGCMC 1 cut(s) 928
BamHI GGATCC 1 cut(s) 312
BanI GGYRCC 1 cut(s) 219
BarI GAAGNNNNNNTAC 2 cut(s) 752, 784
BbsI GAAGAC 1 cut(s) 1062
Bbv12I GWGCWC 1 cut(s) 928
BbvI GCAGC 4 cut(s) 536, 637, 1099, 1198
BccI CCATC 2 cut(s) 350, 859
BceAI ACGGC 1 cut(s) 477
BciT130I CCWGG 1 cut(s) 178
BcoDI GTCTC 5 cut(s) 68, 100, 293, 727, 1254
BfaI CTAG 3 cut(s) 236, 878, 1303
BfrI CTTAAG 1 cut(s) 1073
BfuAI ACCTGC 1 cut(s) 240
BisI GCNGC 4 cut(s) 525, 626, 1088, 1212
BlsI GCNGC 4 cut(s) 526, 627, 1089, 1213
Bme1390I CCNGG 1 cut(s) 178
Bme18I GGWCC 1 cut(s) 339
BmgT120I GGNCC 1 cut(s) 339
BmiI GGNNCC 2 cut(s) 221, 314
BmrFI CCNGG 1 cut(s) 178
BmsI GCATC 5 cut(s) 29, 161, 536, 675, 1099
BmtI GCTAGC 1 cut(s) 239
BpiI GAAGAC 1 cut(s) 1062
BpmI CTGGAG 1 cut(s) 858
BpuEI CTTGAG 5 cut(s) 155, 616, 709, 1027, 1217
BsaBI GATNNNNATC 1 cut(s) 407
BsaI GGTCTC 1 cut(s) 68
BsaJI CCNNGG 7 cut(s) 256, 393, 433, 498, 560, 648, 1155
BsaWI WCCGGW 2 cut(s) 336, 543
Bsc4I CCNNNNNNNGG 6 cut(s) 37, 257, 336, 499, 1203, 1256
Bse118I RCCGGY 2 cut(s) 336, 1129
Bse3DI GCAATG 1 cut(s) 1044
Bse8I GATNNNNATC 1 cut(s) 407
BseBI CCWGG 1 cut(s) 178
BseDI CCNNGG 7 cut(s) 256, 393, 433, 498, 560, 648, 1155
BseJI GATNNNNATC 1 cut(s) 407
BseLI CCNNNNNNNGG 6 cut(s) 37, 257, 336, 499, 1203, 1256
BseMI GCAATG 1 cut(s) 1044
BseMII CTCAG 3 cut(s) 600, 1103, 1125
BseSI GKGCMC 1 cut(s) 928
BseXI GCAGC 4 cut(s) 536, 637, 1099, 1198
BseYI CCCAGC 1 cut(s) 215
BsgI GTGCAG 2 cut(s) 1008, 1197
BshFI GGCC 4 cut(s) 438, 584, 964, 1154
BshNI GGYRCC 1 cut(s) 219
BshTI ACCGGT 1 cut(s) 336
BsiHKAI GWGCWC 1 cut(s) 928
BsiSI CCGG 3 cut(s) 337, 544, 1130
BslFI GGGAC 2 cut(s) 901, 917
BslI CCNNNNNNNGG 6 cut(s) 37, 257, 336, 499, 1203, 1256
BsmAI GTCTC 5 cut(s) 68, 100, 293, 727, 1254
BsmBI CGTCTC 2 cut(s) 100, 293
BsmFI GGGAC 2 cut(s) 901, 917
BsmI GAATGC 1 cut(s) 1213
BsnI GGCC 4 cut(s) 438, 584, 964, 1154
Bso31I GGTCTC 1 cut(s) 68
Bsp1286I GDGCHC 1 cut(s) 928
Bsp143I GATC 5 cut(s) 312, 402, 571, 1108, 1162
Bsp19I CCATGG 3 cut(s) 393, 498, 1155
BspACI CCGC 2 cut(s) 251, 316
BspANI GGCC 4 cut(s) 438, 584, 964, 1154
BspCNI CTCAG 3 cut(s) 601, 1104, 1126
BspLI GGNNCC 2 cut(s) 221, 314
BspMI ACCTGC 1 cut(s) 240
BspOI GCTAGC 1 cut(s) 239
BspPI GGATC 5 cut(s) 307, 320, 579, 1116, 1157
BspQI GCTCTTC 1 cut(s) 1218
BspT107I GGYRCC 1 cut(s) 219
BspTI CTTAAG 1 cut(s) 1073
BspTNI GGTCTC 1 cut(s) 68
BsrDI GCAATG 1 cut(s) 1044
BsrFI RCCGGY 2 cut(s) 336, 1129
BssAI RCCGGY 2 cut(s) 336, 1129
BssECI CCNNGG 7 cut(s) 256, 393, 433, 498, 560, 648, 1155
BssMI GATC 5 cut(s) 312, 402, 571, 1108, 1162
BssT1I CCWWGG 6 cut(s) 256, 393, 498, 560, 648, 1155
Bst2UI CCWGG 1 cut(s) 178
Bst4CI ACNGT 2 cut(s) 198, 694
Bst6I CTCTTC 2 cut(s) 128, 1218
BstAFI CTTAAG 1 cut(s) 1073
BstC8I GCNNGC 3 cut(s) 237, 554, 1198
BstDEI CTNAG 4 cut(s) 472, 609, 1112, 1134
BstDSI CCRYGG 3 cut(s) 393, 498, 1155
BstEII GGTNACC 1 cut(s) 371
BstHHI GCGC 1 cut(s) 176
BstKTI GATC 5 cut(s) 315, 405, 574, 1111, 1165
BstMAI GTCTC 5 cut(s) 68, 100, 293, 727, 1254
BstMBI GATC 5 cut(s) 312, 402, 571, 1108, 1162
BstNI CCWGG 1 cut(s) 178
BstNSI RCATGY 2 cut(s) 424, 910
BstPI GGTNACC 1 cut(s) 371
BstSCI CCNGG 1 cut(s) 176
BstSLI GKGCMC 1 cut(s) 928
BstV1I GCAGC 4 cut(s) 536, 637, 1099, 1198
BstV2I GAAGAC 1 cut(s) 1062
BstX2I RGATCY 2 cut(s) 312, 1108
BstYI RGATCY 2 cut(s) 312, 1108
BsuRI GGCC 4 cut(s) 438, 584, 964, 1154
BtgI CCRYGG 3 cut(s) 393, 498, 1155
BtsI GCAGTG 2 cut(s) 390, 1020
BtsIMutI CAGTG 3 cut(s) 194, 390, 1020
BveI ACCTGC 1 cut(s) 240
Cac8I GCNNGC 3 cut(s) 237, 554, 1198
CfoI GCGC 1 cut(s) 176
Cfr10I RCCGGY 2 cut(s) 336, 1129
Cfr13I GGNCC 1 cut(s) 339
Csp6I GTAC 4 cut(s) 206, 226, 495, 769
CspAI ACCGGT 1 cut(s) 336
CviQI GTAC 4 cut(s) 206, 226, 495, 769
DdeI CTNAG 4 cut(s) 472, 609, 1112, 1134
DpnI GATC 5 cut(s) 314, 404, 573, 1110, 1164
DpnII GATC 5 cut(s) 312, 402, 571, 1108, 1162
Eam1104I CTCTTC 2 cut(s) 128, 1218
EarI CTCTTC 2 cut(s) 128, 1218
Eco130I CCWWGG 6 cut(s) 256, 393, 498, 560, 648, 1155
Eco147I AGGCCT 1 cut(s) 964
Eco31I GGTCTC 1 cut(s) 68
Eco47I GGWCC 1 cut(s) 339
Eco91I GGTNACC 1 cut(s) 371
EcoO65I GGTNACC 1 cut(s) 371
EcoRII CCWGG 1 cut(s) 176
EcoT14I CCWWGG 6 cut(s) 256, 393, 498, 560, 648, 1155
ErhI CCWWGG 6 cut(s) 256, 393, 498, 560, 648, 1155
Esp3I CGTCTC 2 cut(s) 100, 293
FalI AAGNNNNNCTT 4 cut(s) 107, 139, 693, 725
FaqI GGGAC 2 cut(s) 901, 917
FauI CCCGC 1 cut(s) 258
FauNDI CATATG 1 cut(s) 979
Fnu4HI GCNGC 4 cut(s) 525, 626, 1088, 1212
Fsp4HI GCNGC 4 cut(s) 525, 626, 1088, 1212
FspBI CTAG 3 cut(s) 236, 878, 1303
GlaI GCGC 1 cut(s) 175
GluI GCNGC 4 cut(s) 525, 626, 1088, 1212
GsaI CCCAGC 1 cut(s) 219
GsuI CTGGAG 1 cut(s) 858
HaeIII GGCC 4 cut(s) 438, 584, 964, 1154
HapII CCGG 3 cut(s) 337, 544, 1130
HhaI GCGC 1 cut(s) 176
Hin6I GCGC 1 cut(s) 174
HinP1I GCGC 1 cut(s) 174
HincII GTYRAC 3 cut(s) 541, 674, 1188
HindII GTYRAC 3 cut(s) 541, 674, 1188
HindIII AAGCTT 1 cut(s) 970
HinfI GANTC 5 cut(s) 547, 1011, 1189, 1246, 1262
HpaII CCGG 3 cut(s) 337, 544, 1130
HphI GGTGA 3 cut(s) 337, 383, 1172
Hpy166II GTNNAC 6 cut(s) 357, 388, 541, 674, 926, 1188
Hpy188I TCNGA 4 cut(s) 92, 170, 296, 1113
Hpy188III TCNNGA 5 cut(s) 837, 886, 1006, 1220, 1250
Hpy8I GTNNAC 6 cut(s) 357, 388, 541, 674, 926, 1188
Hpy99I CGWCG 1 cut(s) 887
HpyAV CCTTC 4 cut(s) 133, 476, 562, 754
HpyCH4III ACNGT 2 cut(s) 198, 694
HpyCH4V TGCA 8 cut(s) 383, 752, 799, 926, 950, 1025, 1042, 1214
HpyF3I CTNAG 4 cut(s) 472, 609, 1112, 1134
HspAI GCGC 1 cut(s) 174
Kzo9I GATC 5 cut(s) 312, 402, 571, 1108, 1162
LguI GCTCTTC 1 cut(s) 1218
LmnI GCTCC 3 cut(s) 93, 275, 648
Lsp1109I GCAGC 4 cut(s) 536, 637, 1099, 1198
LweI GCATC 5 cut(s) 29, 161, 536, 675, 1099
MaeI CTAG 3 cut(s) 236, 878, 1303
MaeIII GTNAC 2 cut(s) 190, 371
MalI GATC 5 cut(s) 314, 404, 573, 1110, 1164
MboI GATC 5 cut(s) 312, 402, 571, 1108, 1162
MboII GAAGA 8 cut(s) 115, 397, 797, 1067, 1157, 1235, 1284, 1285
MflI RGATCY 2 cut(s) 312, 1108
MhlI GDGCHC 1 cut(s) 928
MluCI AATT 9 cut(s) 289, 453, 503, 576, 633, 654, 741, 1116, 1168
MlyI GAGTC 2 cut(s) 1183, 1256
MnlI CCTC 9 cut(s) 31, 38, 255, 386, 443, 567, 975, 1144, 1290
MroXI GAANNNNTTC 2 cut(s) 735, 1227
MseI TTAA 2 cut(s) 603, 1074
MslI CAYNNNNRTG 2 cut(s) 350, 398
MspCI CTTAAG 1 cut(s) 1073
MspI CCGG 3 cut(s) 337, 544, 1130
MspR9I CCNGG 1 cut(s) 178
Mva1269I GAATGC 1 cut(s) 1213
MvaI CCWGG 1 cut(s) 178
NcoI CCATGG 3 cut(s) 393, 498, 1155
NdeI CATATG 1 cut(s) 979
NdeII GATC 5 cut(s) 312, 402, 571, 1108, 1162
NheI GCTAGC 1 cut(s) 235
NlaIV GGNNCC 2 cut(s) 221, 314
NmeAIII GCCGAG 2 cut(s) 414, 962
NmuCI GTSAC 2 cut(s) 190, 371
NspI RCATGY 2 cut(s) 424, 910
PceI AGGCCT 1 cut(s) 964
PciI ACATGT 1 cut(s) 906
PciSI GCTCTTC 1 cut(s) 1218
PcsI WCGNNNNNNNCGW 1 cut(s) 810
PctI GAATGC 1 cut(s) 1213
PdmI GAANNNNTTC 2 cut(s) 735, 1227
PfeI GAWTC 3 cut(s) 547, 1011, 1246
PinAI ACCGGT 1 cut(s) 336
PkrI GCNGC 4 cut(s) 526, 627, 1089, 1213
PleI GAGTC 2 cut(s) 1183, 1256
PpsI GAGTC 2 cut(s) 1183, 1256
PscI ACATGT 1 cut(s) 906
Psp6I CCWGG 1 cut(s) 176
PspEI GGTNACC 1 cut(s) 371
PspFI CCCAGC 1 cut(s) 215
PspGI CCWGG 1 cut(s) 176
PspN4I GGNNCC 2 cut(s) 221, 314
PspPI GGNCC 1 cut(s) 339
PsuI RGATCY 2 cut(s) 312, 1108
RsaI GTAC 4 cut(s) 207, 227, 496, 770
RsaNI GTAC 4 cut(s) 206, 226, 495, 769
RseI CAYNNNNRTG 2 cut(s) 350, 398
SapI GCTCTTC 1 cut(s) 1218
SaqAI TTAA 2 cut(s) 603, 1074
SatI GCNGC 4 cut(s) 525, 626, 1088, 1212
Sau3AI GATC 5 cut(s) 312, 402, 571, 1108, 1162
Sau96I GGNCC 1 cut(s) 339
SchI GAGTC 2 cut(s) 1183, 1256
ScrFI CCNGG 1 cut(s) 178
SduI GDGCHC 1 cut(s) 928
SfaNI GCATC 5 cut(s) 29, 161, 536, 675, 1099
SinI GGWCC 1 cut(s) 339
SmiMI CAYNNNNRTG 2 cut(s) 350, 398
SmlI CTYRAG 6 cut(s) 134, 595, 724, 1006, 1073, 1232
SmoI CTYRAG 6 cut(s) 134, 595, 724, 1006, 1073, 1232
Sse9I AATT 9 cut(s) 289, 453, 503, 576, 633, 654, 741, 1116, 1168
SseBI AGGCCT 1 cut(s) 964
SsiI CCGC 2 cut(s) 251, 316
SspMI CTAG 3 cut(s) 236, 878, 1303
StuI AGGCCT 1 cut(s) 964
StyD4I CCNGG 1 cut(s) 176
StyI CCWWGG 6 cut(s) 256, 393, 498, 560, 648, 1155
TaaI ACNGT 2 cut(s) 198, 694
TaqI TCGA 2 cut(s) 1179, 1296
TaqII GACCGA 2 cut(s) 50, 258
TasI AATT 9 cut(s) 289, 453, 503, 576, 633, 654, 741, 1116, 1168
TatI WGTACW 3 cut(s) 205, 225, 768
TfiI GAWTC 3 cut(s) 547, 1011, 1246
Tru1I TTAA 2 cut(s) 603, 1074
Tru9I TTAA 2 cut(s) 603, 1074
TscAI CASTG 3 cut(s) 201, 390, 1027
TseFI GTSAC 2 cut(s) 190, 371
TseI GCWGC 4 cut(s) 524, 625, 1087, 1211
Tsp45I GTSAC 2 cut(s) 190, 371
TspDTI ATGAA 2 cut(s) 397, 773
TspRI CASTG 3 cut(s) 201, 390, 1027
Vha464I CTTAAG 1 cut(s) 1073
VneI GTGCAC 1 cut(s) 924
VpaK11BI GGWCC 1 cut(s) 339
XapI RAATTY 3 cut(s) 503, 576, 1168
XceI RCATGY 2 cut(s) 424, 910
XmnI GAANNNNTTC 2 cut(s) 735, 1227
XspI CTAG 3 cut(s) 236, 878, 1303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.