Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0003447

Physical Location & Seq

Genomic Coordinates Reverse (-)

39976938 .. 39986093

Gene Structure 9156 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G029020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2511 bp

ATGCAGAACAAGGTTTGTGGCTGGAAATTAGGCCAAAATGGGCAGCAGGTGATCAAAGGTCGTCATCAAGCATCTGATGGTGATCAACCACCTCATGAGCAACATCACAATTACAAGAATAATGATCAAATGATGTACTCAAACATATCATCGTCGTCGGATCTCAACTTGAGAAACCTCTCAAAGCTTATACTTCCTCCTTTGGGTGCCTCGAGCTACAACCAGCCGACTCAAATGCACTCAAAAGGCTGGATTATTTTACCCATGGACTCCAGATACAGGAGTTGGGAGACATTTATGGTGCTTTTGGTGGCTTACTCAGCCTGGGTATACCCGTTTGAGGTTGCTTTTCTCATGTCGTCGTCGGGAAAAAGCAGCAAGCCTCTCTACTTAGCAGGCTACATTGTTGATCTATTTTTCGGCATCGATATCATATTGACATTCTTCGTCGCATATATTGATCCCAGAACTCAATTACTTGTTCTCGACTCCAAAAAGATCGCTACAAGATATCTTTCGACATGGTTTGTTATGGATTTGGCATCAACCCTCCCCTTTGAGATTATAGGCAAACACAAACTCGGTCTCTCCTACTCTCTCTTGGGATTGCTCCGATTTTGGCGATTGAGACGAGCAAAGCAACTCTTCACAAGGCTTGAGAAGGACATCAGGTTTAGCTACTTCTGGGTCAGATGCGCCAGGCTTTTATCTGTGACACTGTTTACAGTACATTGTGCTGGGTGCCTGTACTACCTGCTAGCAGACCGATACCCGCACCAAGGGAGGACATGGATTGGAGCTGTTATTCCCAATTTCAGAGAGACGAGTCTGTGGATCCGCTACATTTCAGCCCTCTACTGGTCCATCACCACCATGTCCACCGTTGGTTATGGTGACCTCCATGCAGTGAACACCATGGAAATGATCTTCATCATTTTATACATGCTTTTCAACCTCGGCCTTGCTGCTTACCTAATTGGCAACATGACAAACTTAGTTGTTGAAGGCACTCGCCGTACCATGGAATTTAGAAACAGCGTTGAAGCAGCATCAAACTTTGTTGACCGCAATCGCTTGCCTCCAAGGTTGAAGAATCAAATTCTGGCCTATATTTGCTTGAGATTTAAGGCTGAGAGCTTGAACCAGCAGCAAATAATTGAACAGCTCCCCAAGTCAATTTTAAAAGAAGTTTATCTTTTCAAGGGTGTCTCAAGGGAAATACTTCTAATTCTGGTTGCAAACATGAAGGCAGAGTACATACCACCAAGAGAAGATGTTGTAATGCAAAACGAAGCACCCGATGATATATACATCATTGTTTCTGGAGAAGTGGAAATCATTGATTGTGAGATGGATAAAGAGCTAGTCGTCGGGACTTTGAAATCTGGGGACATGTTTGGAGAAGTAGGTGCACTTTGTTGCCGAGAAGTTGGTGCACTTTGTTGTAGGCCTCAAAGCTTTACATATCGGACAAAAACACTTTCACAACTCTTGAGACTCAAAACCACTGCACTAATAGAAGCAATGCAGATCAAACAAGAAGACAATGCACAAATGCTTAAGAATTTCAAGCAGCATCACAAAAAGCTAAGGGATCTGAGAATTGGAGAAATATTGGCTGAGAGTGGGGAAGATGAGGCCATGGGTGATCCAAGTTTAGCATCCGACTTATTGACTATAGCCAGCAAAGGGAATGCTGCACTTCTTGAAGAGCTCCTCAAGTCAAAGTTGGATCCTGACATTGGAGACTCCAAAGGAAGAACACCTCTGCATGTAGCAGCATCAAACGGGCACGAAGAATGTGTCTTGGTACTCCTCAAGTATGCTTGTAACATACATGTGAGAGACACTAATGGTAACACGGCAATATGGGAAGCAATTGCAGCAAAGCACCATTCTATATTCAAGATCCTCTACTATTATGCTGCCTTTTCTTATCCCTACACTGCCGGTGATCTTCTATGCACCGCTGCCAGAAGAAACGATCTGAATGTGATGAAGGAACTGTTGAAGCATGAATTGCAAGTTGACTCAAAGGATTTCGACGGAAAAATAGCAGTACAAGTAGCCATGGAAGAAAACAATGTAGACATGGTAAACTTGCTGGTGATGAATGGAGCAGATGTCACCAATGTTTCACATGACTACTTATTTCCTTCACAAACCTTAAGCGATATGCTGCAAAAACGAGAGGTTGGACACCAGATTACAGTGCCAGACCCTACCCTGAATGAAGTGCTATTGTTCAGAAATGATGGAGAGAAAAATGTTGATTGGAAAAAATTCAATGGAGTGAATTTTCCAAGAGAGAAACACTGTTGCACTGAAGCCGGGAGGTTGATTAGATTGCCTCATTCACTAGAGGAGCTCAAAAATATTGCAGGTGAAAAGTTTGGGTTTGATCCAGAGAATGTAATATTAACGGATGAAGAAGGAGCAGAAATAGACTGTATCGAAGTGATTAGAGATAATGACAAGCTTTTCATATATATAGTGGAGGACACAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009506 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0012505 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0030054 GO:0031224 GO:0031226 GO:0031984 GO:0033993 GO:0034220 GO:0042175 GO:0042221 GO:0042391 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0097305 GO:0098655 GO:0098660 GO:0098662 GO:0098827 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ion_trans KHA cNMP_binding

Protein Analysis

836

Amino Acids

95.23

Weight (kDa)

6.27

Isoelectric Point (pI)

31.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	93 - 340	1.1e-40	Ion transport protein
Ion_trans_2	PF07885	253 - 334	8.5e-13	Ion channel
cNMP_binding	PF00027	419 - 510	9.4e-11	Cyclic nucleotide-binding domain
Ank_4	PF13637	559 - 606	1e-06	Ankyrin repeats (many copies)
Ank_2	PF12796	560 - 641	5.7e-15	Ankyrin repeats (3 copies)
Ank_5	PF13857	577 - 623	1.1e-08	Ankyrin repeats (many copies)
Ank	PF00023	586 - 616	8.6e-08	Ankyrin repeat
Ank_2	PF12796	653 - 710	3.6e-07	Ankyrin repeats (3 copies)
KHA	PF11834	772 - 829	4.3e-19	KHA, dimerisation domain of potassium ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G22200 AT4G22200
fragaria_vesca	FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980 FvH4_5g28980
malus_domestica	MD08G1236000.v1.1
prunus_persica	Prupe.1G572200_v2.0.a1 Prupe.1G572200_v2.0.a1 Prupe.1G572200_v2.0.a1
pyrus_communis	pycom08g20420
rosa_chinensis	RchiOBHm_Chr7g0221301 RchiOBHm_Chr7g0222541
rosa_laevigata	RLG00000002163
rosa_multiflora	Rmu_co8307231.1_g000001 Rmu_sc0000324.1_g000021
rosa_roxburghii	Rroxscaffold_3G00238430
rosa_rugosa	Rorug07G0202000
rosa_samantha	Rh6BG194600 Rh7AG341200 Rh7AG352200 Rh7BG332200 Rh7CG359100 Rh7CG369500 Rh7DG339700
rosa_wichuraiana	Rw7G029020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	37, 2372
Acc36I	ACCTGC	3 cut(s)	37, 762, 2372
AccB1I	GGYRCC	2 cut(s)	206, 741
AccI	GTMKAC	2 cut(s)	330, 2088
AciI	CCGC	4 cut(s)	773, 838, 1066, 1968
AcsI	RAATTY	5 cut(s)	1025, 1098, 1564, 2282, 2296
AcuI	CTGAAG	1 cut(s)	2346
AfaI	GTAC	7 cut(s)	137, 729, 749, 1018, 1256, 1812, 2061
AfiI	CCNNNNNNNGG	8 cut(s)	203, 279, 340, 779, 858, 1021, 1689, 1742
AflII	CTTAAG	2 cut(s)	1559, 2167
AflIII	ACRYGT	2 cut(s)	1392, 1837
AjnI	CCWGG	2 cut(s)	323, 698
Alw21I	GWGCWC	4 cut(s)	1414, 1438, 1716, 2370
Alw26I	GTCTC	8 cut(s)	284, 590, 622, 815, 1213, 1489, 1740, 1839
Alw44I	GTGCAC	2 cut(s)	1410, 1434
Ama87I	CYCGRG	1 cut(s)	211
AoxI	GGCC	5 cut(s)	31, 958, 1104, 1448, 1638
ApaLI	GTGCAC	2 cut(s)	1410, 1434
ApoI	RAATTY	5 cut(s)	1025, 1098, 1564, 2282, 2296
ArsI	GACNNNNNNTTYG	2 cut(s)	1788, 1820
Asp700I	GAANNNNTTC	2 cut(s)	1221, 2282
AspLEI	GCGC	1 cut(s)	698
AspS9I	GGNCC	1 cut(s)	861
AsuC2I	CCSGG	1 cut(s)	2332
AsuHPI	GGTGA	9 cut(s)	61, 92, 859, 905, 1658, 1964, 2119, 2119, 2396
AsuNHI	GCTAGC	1 cut(s)	757
AvaI	CYCGRG	1 cut(s)	211
AvaII	GGWCC	1 cut(s)	861
BaeGI	GKGCMC	3 cut(s)	1414, 1438, 1794
BaeI	ACNNNNGTAYC	2 cut(s)	268, 301
BamHI	GGATCC	2 cut(s)	834, 1732
BanI	GGYRCC	2 cut(s)	206, 741
BanII	GRGCYC	2 cut(s)	1716, 2370
BarI	GAAGNNNNNNTAC	2 cut(s)	1238, 1270
BbsI	GAAGAC	1 cut(s)	1548
Bbv12I	GWGCWC	4 cut(s)	1414, 1438, 1716, 2370
BccI	CCATC	4 cut(s)	71, 872, 1345, 2249
BceAI	ACGGC	2 cut(s)	999, 1878
BcgI	CGANNNNNNTGC	2 cut(s)	217, 251
BciT130I	CCWGG	2 cut(s)	325, 700
BclI	TGATCA	3 cut(s)	51, 82, 124
BcnI	CCSGG	1 cut(s)	2332
BcoDI	GTCTC	8 cut(s)	284, 590, 622, 815, 1213, 1489, 1740, 1839
BfaI	CTAG	3 cut(s)	758, 1364, 2360
BfmI	CTRYAG	1 cut(s)	1677
BfrI	CTTAAG	2 cut(s)	1559, 2167
BfuAI	ACCTGC	3 cut(s)	37, 762, 2372
Bme1390I	CCNGG	3 cut(s)	325, 700, 2332
Bme18I	GGWCC	1 cut(s)	861
BmeT110I	CYCGRG	1 cut(s)	211
BmgT120I	GGNCC	1 cut(s)	861
BmiI	GGNNCC	4 cut(s)	208, 743, 836, 1734
BmrFI	CCNGG	3 cut(s)	325, 700, 2332
BmsI	GCATC	8 cut(s)	80, 432, 551, 683, 1058, 1585, 1670, 1790
BmtI	GCTAGC	1 cut(s)	761
BpiI	GAAGAC	1 cut(s)	1548
BpmI	CTGGAG	2 cut(s)	256, 1344
Bpu10I	CCTNAGC	1 cut(s)	1589
BpuEI	CTTGAG	7 cut(s)	190, 677, 1138, 1195, 1513, 1703, 1802
BpuMI	CCSGG	1 cut(s)	2332
Bsa29I	ATCGAT	1 cut(s)	426
BsaBI	GATNNNNATC	2 cut(s)	81, 929
BsaI	GGTCTC	1 cut(s)	590
BsaJI	CCNNGG	9 cut(s)	264, 324, 778, 915, 955, 1020, 1082, 1641, 2070
BsaXI	ACNNNNNCTCC	2 cut(s)	2109, 2139
Bsc4I	CCNNNNNNNGG	8 cut(s)	203, 279, 340, 779, 858, 1021, 1689, 1742
Bse118I	RCCGGY	1 cut(s)	1949
Bse1I	ACTGG	1 cut(s)	863
Bse3DI	GCAATG	1 cut(s)	1530
Bse8I	GATNNNNATC	2 cut(s)	81, 929
BseBI	CCWGG	2 cut(s)	325, 700
BseCI	ATCGAT	1 cut(s)	426
BseDI	CCNNGG	9 cut(s)	264, 324, 778, 915, 955, 1020, 1082, 1641, 2070
BseGI	GGATG	2 cut(s)	1661, 2431
BseJI	GATNNNNATC	2 cut(s)	81, 929
BseLI	CCNNNNNNNGG	8 cut(s)	203, 279, 340, 779, 858, 1021, 1689, 1742
BseMI	GCAATG	1 cut(s)	1530
BseMII	CTCAG	4 cut(s)	333, 1122, 1589, 1611
BseNI	ACTGG	1 cut(s)	863
BseRI	GAGGAG	3 cut(s)	1706, 1805, 2378
BseSI	GKGCMC	3 cut(s)	1414, 1438, 1794
BseYI	CCCAGC	1 cut(s)	737
BsgI	GTGCAG	2 cut(s)	1494, 1683
BshFI	GGCC	5 cut(s)	33, 960, 1106, 1450, 1640
BshNI	GGYRCC	2 cut(s)	206, 741
BshVI	ATCGAT	1 cut(s)	426
BsiHKAI	GWGCWC	4 cut(s)	1414, 1438, 1716, 2370
BsiHKCI	CYCGRG	1 cut(s)	211
BsiSI	CCGG	2 cut(s)	1950, 2331
BslFI	GGGAC	2 cut(s)	1387, 1403
BslI	CCNNNNNNNGG	8 cut(s)	203, 279, 340, 779, 858, 1021, 1689, 1742
BsmAI	GTCTC	8 cut(s)	284, 590, 622, 815, 1213, 1489, 1740, 1839
BsmBI	CGTCTC	2 cut(s)	622, 815
BsmFI	GGGAC	2 cut(s)	1387, 1403
BsmI	GAATGC	1 cut(s)	1699
BsnI	GGCC	5 cut(s)	33, 960, 1106, 1450, 1640
Bso31I	GGTCTC	1 cut(s)	590
BsoBI	CYCGRG	1 cut(s)	211
Bsp1286I	GDGCHC	5 cut(s)	1414, 1438, 1716, 1794, 2370
Bsp19I	CCATGG	5 cut(s)	264, 915, 1020, 1641, 2070
BspACI	CCGC	4 cut(s)	773, 838, 1066, 1968
BspANI	GGCC	5 cut(s)	33, 960, 1106, 1450, 1640
BspCNI	CTCAG	4 cut(s)	332, 1123, 1590, 1612
BspDI	ATCGAT	1 cut(s)	426
BspHI	TCATGA	1 cut(s)	94
BspLI	GGNNCC	4 cut(s)	208, 743, 836, 1734
BspMI	ACCTGC	3 cut(s)	37, 762, 2372
BspOI	GCTAGC	1 cut(s)	761
BspQI	GCTCTTC	1 cut(s)	1704
BspT107I	GGYRCC	2 cut(s)	206, 741
BspTI	CTTAAG	2 cut(s)	1559, 2167
BspTNI	GGTCTC	1 cut(s)	590
BsrDI	GCAATG	1 cut(s)	1530
BsrFI	RCCGGY	1 cut(s)	1949
BsrI	ACTGG	1 cut(s)	863
BssAI	RCCGGY	1 cut(s)	1949
BssECI	CCNNGG	9 cut(s)	264, 324, 778, 915, 955, 1020, 1082, 1641, 2070
BssNAI	GTATAC	1 cut(s)	331
BssT1I	CCWWGG	7 cut(s)	264, 778, 915, 1020, 1082, 1641, 2070
Bst1107I	GTATAC	1 cut(s)	331
Bst2UI	CCWGG	2 cut(s)	325, 700
Bst4CI	ACNGT	7 cut(s)	720, 727, 883, 2007, 2212, 2318, 2450
Bst6I	CTCTTC	2 cut(s)	650, 1704
BstAFI	CTTAAG	2 cut(s)	1559, 2167
BstAPI	GCANNNNNTGC	1 cut(s)	2020
BstC8I	GCNNGC	5 cut(s)	380, 397, 759, 1076, 1684
BstDEI	CTNAG	7 cut(s)	319, 391, 994, 1131, 1589, 1598, 1620
BstDSI	CCRYGG	5 cut(s)	264, 915, 1020, 1641, 2070
BstEII	GGTNACC	1 cut(s)	893
BstF5I	GGATG	2 cut(s)	1661, 2431
BstHHI	GCGC	1 cut(s)	698
BstMAI	GTCTC	8 cut(s)	284, 590, 622, 815, 1213, 1489, 1740, 1839
BstMWI	GCNNNNNNNGC	3 cut(s)	320, 1883, 2020
BstNI	CCWGG	2 cut(s)	325, 700
BstNSI	RCATGY	4 cut(s)	946, 1396, 1775, 1841
BstPI	GGTNACC	1 cut(s)	893
BstSCI	CCNGG	3 cut(s)	323, 698, 2330
BstSFI	CTRYAG	1 cut(s)	1677
BstSLI	GKGCMC	3 cut(s)	1414, 1438, 1794
BstV2I	GAAGAC	1 cut(s)	1548
BstX2I	RGATCY	5 cut(s)	160, 834, 1594, 1732, 1908
BstYI	RGATCY	5 cut(s)	160, 834, 1594, 1732, 1908
BstZ17I	GTATAC	1 cut(s)	331
Bsu15I	ATCGAT	1 cut(s)	426
BsuRI	GGCC	5 cut(s)	33, 960, 1106, 1450, 1640
BsuTUI	ATCGAT	1 cut(s)	426
BtgI	CCRYGG	5 cut(s)	264, 915, 1020, 1641, 2070
BtsCI	GGATG	2 cut(s)	1661, 2431
BtsI	GCAGTG	3 cut(s)	912, 1506, 1944
BtsIMutI	CAGTG	7 cut(s)	716, 912, 1506, 1944, 2217, 2314, 2322
BveI	ACCTGC	3 cut(s)	37, 762, 2372
Cac8I	GCNNGC	5 cut(s)	380, 397, 759, 1076, 1684
CciI	TCATGA	1 cut(s)	94
CfoI	GCGC	1 cut(s)	698
Cfr10I	RCCGGY	1 cut(s)	1949
Cfr13I	GGNCC	1 cut(s)	861
ClaI	ATCGAT	1 cut(s)	426
Csp6I	GTAC	7 cut(s)	136, 728, 748, 1017, 1255, 1811, 2060
CspCI	CAANNNNNGTGG	1 cut(s)	33
CviQI	GTAC	7 cut(s)	136, 728, 748, 1017, 1255, 1811, 2060
DdeI	CTNAG	7 cut(s)	319, 391, 994, 1131, 1589, 1598, 1620
DraI	TTTAAA	1 cut(s)	1182
Eam1104I	CTCTTC	2 cut(s)	650, 1704
EarI	CTCTTC	2 cut(s)	650, 1704
Ecl136II	GAGCTC	2 cut(s)	1714, 2368
Eco130I	CCWWGG	7 cut(s)	264, 778, 915, 1020, 1082, 1641, 2070
Eco147I	AGGCCT	1 cut(s)	1450
Eco24I	GRGCYC	2 cut(s)	1716, 2370
Eco31I	GGTCTC	1 cut(s)	590
Eco32I	GATATC	2 cut(s)	430, 512
Eco47I	GGWCC	1 cut(s)	861
Eco53kI	GAGCTC	2 cut(s)	1714, 2368
Eco57I	CTGAAG	1 cut(s)	2346
Eco88I	CYCGRG	1 cut(s)	211
Eco91I	GGTNACC	1 cut(s)	893
EcoICRI	GAGCTC	2 cut(s)	1714, 2368
EcoO65I	GGTNACC	1 cut(s)	893
EcoRII	CCWGG	2 cut(s)	323, 698
EcoRV	GATATC	2 cut(s)	430, 512
EcoT14I	CCWWGG	7 cut(s)	264, 778, 915, 1020, 1082, 1641, 2070
EcoT38I	GRGCYC	2 cut(s)	1716, 2370
ErhI	CCWWGG	7 cut(s)	264, 778, 915, 1020, 1082, 1641, 2070
Esp3I	CGTCTC	2 cut(s)	622, 815
FalI	AAGNNNNNCTT	4 cut(s)	629, 661, 1179, 1211
FaqI	GGGAC	2 cut(s)	1387, 1403
FauI	CCCGC	1 cut(s)	780
FbaI	TGATCA	3 cut(s)	51, 82, 124
FblI	GTMKAC	2 cut(s)	330, 2088
FokI	GGATG	2 cut(s)	1648, 2438
FriOI	GRGCYC	2 cut(s)	1716, 2370
FspBI	CTAG	3 cut(s)	758, 1364, 2360
GlaI	GCGC	1 cut(s)	697
GsaI	CCCAGC	1 cut(s)	741
GsuI	CTGGAG	2 cut(s)	256, 1344
HaeIII	GGCC	5 cut(s)	33, 960, 1106, 1450, 1640
HapII	CCGG	2 cut(s)	1950, 2331
HhaI	GCGC	1 cut(s)	698
Hin6I	GCGC	1 cut(s)	696
HinP1I	GCGC	1 cut(s)	696
HincII	GTYRAC	2 cut(s)	1063, 2029
HindII	GTYRAC	2 cut(s)	1063, 2029
HindIII	AAGCTT	3 cut(s)	185, 1456, 2477
HinfI	GANTC	8 cut(s)	229, 269, 488, 826, 1093, 1497, 1748, 2030
HpaII	CCGG	2 cut(s)	1950, 2331
HphI	GGTGA	9 cut(s)	61, 92, 859, 905, 1658, 1964, 2119, 2119, 2396
Hpy99I	CGWCG	7 cut(s)	157, 160, 364, 367, 452, 1373, 2048
HpyAV	CCTTC	6 cut(s)	655, 998, 1240, 1993, 2166, 2426
HpyCH4III	ACNGT	7 cut(s)	720, 727, 883, 2007, 2212, 2318, 2450
HpyF10VI	GCNNNNNNNGC	3 cut(s)	320, 1883, 2020
HpyF3I	CTNAG	7 cut(s)	319, 391, 994, 1131, 1589, 1598, 1620
HspAI	GCGC	1 cut(s)	696
Ksp22I	TGATCA	3 cut(s)	51, 82, 124
LguI	GCTCTTC	1 cut(s)	1704
LmnI	GCTCC	7 cut(s)	615, 797, 1170, 1719, 2117, 2365, 2435
LweI	GCATC	8 cut(s)	80, 432, 551, 683, 1058, 1585, 1670, 1790
MaeI	CTAG	3 cut(s)	758, 1364, 2360
MaeIII	GTNAC	5 cut(s)	712, 893, 1829, 1856, 2125
MfeI	CAATTG	1 cut(s)	1878
MflI	RGATCY	5 cut(s)	160, 834, 1594, 1732, 1908
MhlI	GDGCHC	5 cut(s)	1414, 1438, 1716, 1794, 2370
MlyI	GAGTC	7 cut(s)	223, 263, 482, 835, 1491, 1742, 2024
MmeI	TCCRAC	4 cut(s)	138, 1689, 1710, 2176
MroXI	GAANNNNTTC	2 cut(s)	1221, 2282
MseI	TTAA	6 cut(s)	1125, 1181, 1560, 2168, 2420, 2509
MslI	CAYNNNNRTG	3 cut(s)	872, 920, 1838
MspA1I	CMGCKG	1 cut(s)	1970
MspCI	CTTAAG	2 cut(s)	1559, 2167
MspI	CCGG	2 cut(s)	1950, 2331
MspR9I	CCNGG	3 cut(s)	325, 700, 2332
MunI	CAATTG	1 cut(s)	1878
Mva1269I	GAATGC	1 cut(s)	1699
MvaI	CCWGG	2 cut(s)	325, 700
MwoI	GCNNNNNNNGC	3 cut(s)	320, 1883, 2020
NciI	CCSGG	1 cut(s)	2332
NcoI	CCATGG	5 cut(s)	264, 915, 1020, 1641, 2070
NheI	GCTAGC	1 cut(s)	757
NlaIV	GGNNCC	4 cut(s)	208, 743, 836, 1734
NmeAIII	GCCGAG	2 cut(s)	936, 1448
NmuCI	GTSAC	3 cut(s)	712, 893, 2125
NspI	RCATGY	4 cut(s)	946, 1396, 1775, 1841
PaeR7I	CTCGAG	1 cut(s)	211
PagI	TCATGA	1 cut(s)	94
PaqCI	CACCTGC	2 cut(s)	37, 2372
PceI	AGGCCT	1 cut(s)	1450
PciI	ACATGT	2 cut(s)	1392, 1837
PciSI	GCTCTTC	1 cut(s)	1704
PcsI	WCGNNNNNNNCGW	1 cut(s)	1296
PctI	GAATGC	1 cut(s)	1699
PdmI	GAANNNNTTC	2 cut(s)	1221, 2282
PfeI	GAWTC	1 cut(s)	1093
PleI	GAGTC	7 cut(s)	223, 263, 482, 834, 1491, 1742, 2024
PpsI	GAGTC	7 cut(s)	223, 263, 482, 834, 1491, 1742, 2024
PscI	ACATGT	2 cut(s)	1392, 1837
Psp124BI	GAGCTC	2 cut(s)	1716, 2370
Psp6I	CCWGG	2 cut(s)	323, 698
PspEI	GGTNACC	1 cut(s)	893
PspFI	CCCAGC	1 cut(s)	737
PspGI	CCWGG	2 cut(s)	323, 698
PspN4I	GGNNCC	4 cut(s)	208, 743, 836, 1734
PspPI	GGNCC	1 cut(s)	861
PspXI	VCTCGAGB	1 cut(s)	211
PsuI	RGATCY	5 cut(s)	160, 834, 1594, 1732, 1908
RsaI	GTAC	7 cut(s)	137, 729, 749, 1018, 1256, 1812, 2061
RsaNI	GTAC	7 cut(s)	136, 728, 748, 1017, 1255, 1811, 2060
RseI	CAYNNNNRTG	3 cut(s)	872, 920, 1838
SacI	GAGCTC	2 cut(s)	1716, 2370
SapI	GCTCTTC	1 cut(s)	1704
SaqAI	TTAA	6 cut(s)	1125, 1181, 1560, 2168, 2420, 2509
Sau96I	GGNCC	1 cut(s)	861
SchI	GAGTC	7 cut(s)	223, 263, 482, 835, 1491, 1742, 2024
ScrFI	CCNGG	3 cut(s)	325, 700, 2332
SduI	GDGCHC	5 cut(s)	1414, 1438, 1716, 1794, 2370
SfaNI	GCATC	8 cut(s)	80, 432, 551, 683, 1058, 1585, 1670, 1790
SfcI	CTRYAG	1 cut(s)	1677
Sfr274I	CTCGAG	1 cut(s)	211
SinI	GGWCC	1 cut(s)	861
SlaI	CTCGAG	1 cut(s)	211
SmiMI	CAYNNNNRTG	3 cut(s)	872, 920, 1838
SseBI	AGGCCT	1 cut(s)	1450
SsiI	CCGC	4 cut(s)	773, 838, 1066, 1968
SspI	AATATT	3 cut(s)	1614, 2377, 2418
SspMI	CTAG	3 cut(s)	758, 1364, 2360
SstI	GAGCTC	2 cut(s)	1716, 2370
StuI	AGGCCT	1 cut(s)	1450
StyD4I	CCNGG	3 cut(s)	323, 698, 2330
StyI	CCWWGG	7 cut(s)	264, 778, 915, 1020, 1082, 1641, 2070
TaaI	ACNGT	7 cut(s)	720, 727, 883, 2007, 2212, 2318, 2450
TaqI	TCGA	6 cut(s)	212, 426, 486, 518, 2043, 2454
TaqII	GACCGA	2 cut(s)	572, 780
TatI	WGTACW	5 cut(s)	135, 727, 747, 1254, 2059
TfiI	GAWTC	1 cut(s)	1093
Tru1I	TTAA	6 cut(s)	1125, 1181, 1560, 2168, 2420, 2509
Tru9I	TTAA	6 cut(s)	1125, 1181, 1560, 2168, 2420, 2509
TscAI	CASTG	7 cut(s)	723, 912, 1513, 1951, 2217, 2321, 2329
TseFI	GTSAC	3 cut(s)	712, 893, 2125
Tsp45I	GTSAC	3 cut(s)	712, 893, 2125
TspDTI	ATGAA	8 cut(s)	919, 1259, 2012, 2031, 2126, 2247, 2442, 2473
TspGWI	ACGGA	2 cut(s)	2061, 2438
TspRI	CASTG	7 cut(s)	723, 912, 1513, 1951, 2217, 2321, 2329
Vha464I	CTTAAG	2 cut(s)	1559, 2167
VneI	GTGCAC	2 cut(s)	1410, 1434
VpaK11BI	GGWCC	1 cut(s)	861
XapI	RAATTY	5 cut(s)	1025, 1098, 1564, 2282, 2296
XceI	RCATGY	4 cut(s)	946, 1396, 1775, 1841
XhoI	CTCGAG	1 cut(s)	211
XmiI	GTMKAC	2 cut(s)	330, 2088
XmnI	GAANNNNTTC	2 cut(s)	1221, 2282
XspI	CTAG	3 cut(s)	758, 1364, 2360

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.