Rorug07G0234400

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0012625
Physical Location & Seq
Reverse (-)
21500417 .. 21502844
2428 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0234400.1

Sequence Viewer

Length: 2154 bp
ATGGCTGCTACTAGTACTAGTAGCATTCACTTCACTGTGAATTCCTCAGAAACCAAGAGACCCATCTTCTTCACTTCACCAATCAAACTAATCCCACCCAAAAGATTCACCATTTCTTGCAGGTCTACCAAGTCCCCTCCAAAATCTCCACCAGATTTATCACAACCCAATAACAAGAACACCACCACCAAAACCCCATCTTTGTCTGACCAACTCAAGCCTCTAACCACCACCACTCTCTCCACCCCTCCTCCCAAAGACCAACCCCAACCCCAAGTCCTATCCAAGCCCAAGTCCATCTGGGTCAACCCGGCCAAGCCCAAACGCTCTGTGCTATCCCTCCAGAGGCAGAAGCGCTCTCTCTACTCCTACAATCCTCAGGTCAGAGACCTCAGGCTCTTTGCCCAGAAGCTCAATGACTGTGACTCCTCTCAAGAAGCATTCTTGGCTGCTCTGGAGGAAATCCCACACCCACCCACCAGAGAAAATGCCCTTTTGATTCTCAACAGCTTGAAGCCATGGCAGAAAACCCACATGTTCTTCAACTGGGTCAAGTCCCAGAACCTGTTTCCAATGGAGACCATCTTCTACAATGTCACCATGAAGTCCATGAGGTTTGGGAGGCAGTTTCAGCTCATTGAGGAGCTTGCTGAGGAGATGATAAGCAATGGGGTTGCGCTTGACAACATTACTTACTCCACTATAATCACTTGTGCCAAAAGGTCCAAGCTTTTCGACAAGGCGGTGGAGTGGTTTGAGAGGATGTACAAGACTGGTTTGATGCCTGATGAGGTGACTTACTCCGCTATTTTAGATGTATATGCCAAATTGGGCAAGGTTGAGGAGGTGCTTAGTTTATATGAGAGAGGGAGGGCTAGTGGGTGGACACCTGACCCTATTGCATTTTCTGTGTTGGGTAAGATGTTTGGTGAGGCTGGGGACTATGATGGTATAAGGTATGTCTTGCAGGAAATGGCTTCTATTGGTGTGAAGCCTAATTTGGTCGTGTACAATACGTTGTTAGAGGCAATGGGGAAGGCTGGAAAGCCTGGTTTAGCTAGGAGTTTGTTCGAAGAAATGGTTGCATCCGGGCTGAAACCGAATGAGAAAACATTGACTGCACTTGTTAAGATCTATGGCAAGGCAAGGTGGGCTAGAGACGCGTTGGAATTGTGGGAGCGGATGAGGTCGAATCAGTGGCCTATGGACTTTATTTTGTATAACACATTGTTGAATATGTGTGCTGACCTTGGCTTGGAGGATGAGGCTAAGAGGCTTTTCGAGGATATGAAGCAGTCAGAGCACTGTAGGCCGGATAGTTATAGTTACACGGCAATGTTGAACATCTTTGGGAGTGGAGGGAATGCTGATGAGGCCATGGAGTTGTTTGAAGAAATGTCCAAGAAGGGTGTGCACCTCAATGTCATGGGTTGCACTTGTTTGATACAATGCTTGGGGAGAGCTAAAAGATTTGGTGATATGGTTCGAGTCTTCAATGTTGCAGTTGAAAGAGGGGTTAAACCGGATGATAGGCTCTGTGGGTGTTTACTGTCTGTTGTGTCATTGTGTGAAAAAACTGAGGATGAGGATATGGTCTTTTCATGCTTGCAGCAGGCTAATCCGAAGTTGGTTATCCTTGTAAAAGTGCTGCAAGATGAGAAAGTAGGGTTTGAGGCAATTAAAGACGAATTCAGGGATGTTATTGGTAGCACTGCAGTTGAATCCAGAAGACCCTTCTGCAATTGCTTGATTGATATATGCAGAAACAAAAATAACCACGAGAGAGCTCATGAGCTGCTCTATCTAGGAACCCTATATGGGTTGTATCCGGGTTTACACAACAAGACAGCAAATGAGTGGTGTTTAGATGTTAGGTCACTATCCATTGGTGCTGCTCACACTGCACTTGAAGAGTGGATGGGAACTCTATACAAAATTGTTCAGCGTGAAGAGGCGCTGCCGAAGTTGTTTTCTGCTCAAACCGGTGCCGGAACTCACAAATTCTCTCAAGGACTGGCCCATTCATTTGGTTCTCATGTGAAGAAGTTGGCTGCACCATTTCGGCAGAGTGAAGAGAAAGCTGGTTGTTTTGTGGCAACTAGGGAGGATTTAGTGTCGTGGGTGCAGTCACAGGCACAATCAATCACTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like Kelch_1

Protein Analysis

717

Amino Acids

80.75

Weight (kDa)

8.56

Isoelectric Point (pI)

44.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 216 - 275 6e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 234 - 276 5.2e-07 PPR repeat family
PPR_long PF17177 281 - 379 2.5e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 329 - 361 3.5e-06 PPR repeat
PPR_2 PF13041 332 - 377 3.3e-11 PPR repeat family
PPR_long PF17177 385 - 539 2.3e-09 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 405 - 448 3.2e-09 PPR repeat family
PPR_1 PF12854 435 - 467 1.3e-06 PPR repeat
PPR_2 PF13041 438 - 475 5.2e-07 PPR repeat family
PPR PF01535 441 - 471 2.6e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 111
AccB1I GGYRCC 1 cut(s) 1985
AccBSI CCGCTC 1 cut(s) 1180
AccI GTMKAC 1 cut(s) 125
AccII CGCG 1 cut(s) 1163
AciI CCGC 3 cut(s) 743, 804, 1180
AcoI YGGCCR 1 cut(s) 312
AcsI RAATTY 3 cut(s) 40, 1688, 2000
AfaI GTAC 3 cut(s) 16, 767, 1010
AfeI AGCGCT 1 cut(s) 356
AfiI CCNNNNNNNGG 3 cut(s) 345, 1255, 1818
AflIII ACRYGT 2 cut(s) 534, 1161
AgeI ACCGGT 1 cut(s) 1982
AgsI TTSAA 9 cut(s) 514, 544, 1234, 1342, 1391, 1495, 1508, 1721, 1910
AhlI ACTAGT 2 cut(s) 11, 17
AjnI CCWGG 1 cut(s) 1048
AjuI GAANNNNNNNTTGG 2 cut(s) 983, 1015
Alw21I GWGCWC 3 cut(s) 1305, 1416, 1789
Alw26I GTCTC 4 cut(s) 52, 381, 572, 1152
Alw44I GTGCAC 1 cut(s) 1412
AlwNI CAGNNNCTG 1 cut(s) 565
Aor51HI AGCGCT 1 cut(s) 356
AoxI GGCC 5 cut(s) 312, 1199, 1310, 1374, 2016
ApaLI GTGCAC 1 cut(s) 1412
ApeKI GCWGC 8 cut(s) 5, 449, 1609, 1648, 1795, 1892, 1957, 2051
ApoI RAATTY 3 cut(s) 40, 1688, 2000
AsiGI ACCGGT 1 cut(s) 1982
AspLEI GCGC 3 cut(s) 357, 679, 1957
AspS9I GGNCC 2 cut(s) 723, 2017
AsuC2I CCSGG 3 cut(s) 311, 1090, 1830
AsuHPI GGTGA 6 cut(s) 69, 100, 589, 805, 941, 1487
AsuII TTCGAA 1 cut(s) 1071
AvaII GGWCC 1 cut(s) 723
AxyI CCTNAGG 2 cut(s) 378, 392
BaeGI GKGCMC 1 cut(s) 1416
BanI GGYRCC 1 cut(s) 1985
BanII GRGCYC 1 cut(s) 1789
BauI CACGAG 1 cut(s) 1778
BbsI GAAGAC 2 cut(s) 1483, 1735
Bbv12I GWGCWC 3 cut(s) 1305, 1416, 1789
BbvCI CCTCAGC 1 cut(s) 651
BbvI GCAGC 7 cut(s) 436, 1621, 1635, 1782, 1879, 1944, 2038
BccI CCATC 6 cut(s) 71, 205, 305, 590, 941, 1912
BceAI ACGGC 1 cut(s) 1347
BciT130I CCWGG 1 cut(s) 1050
BciVI GTATCC 1 cut(s) 1836
BcnI CCSGG 3 cut(s) 311, 1090, 1830
BcoDI GTCTC 4 cut(s) 52, 381, 572, 1152
BcuI ACTAGT 2 cut(s) 11, 17
BfaI CTAG 7 cut(s) 12, 18, 876, 1059, 1155, 1805, 2100
BfmI CTRYAG 2 cut(s) 1306, 1713
BfoI RGCGCY 2 cut(s) 358, 1958
BfuAI ACCTGC 1 cut(s) 111
BfuI GTATCC 1 cut(s) 1836
BglII AGATCT 1 cut(s) 1131
BisI GCNGC 8 cut(s) 6, 450, 1610, 1649, 1796, 1893, 1958, 2052
BlsI GCNGC 8 cut(s) 7, 451, 1611, 1650, 1797, 1894, 1959, 2053
BmcAI AGTACT 1 cut(s) 16
Bme1390I CCNGG 4 cut(s) 311, 1050, 1090, 1830
Bme18I GGWCC 1 cut(s) 723
BmgT120I GGNCC 2 cut(s) 723, 2017
BmiI GGNNCC 2 cut(s) 1810, 1987
BmrFI CCNGG 4 cut(s) 311, 1050, 1090, 1830
BmrI ACTGGG 1 cut(s) 556
BmsI GCATC 2 cut(s) 771, 1094
BmuI ACTGGG 1 cut(s) 556
BpiI GAAGAC 2 cut(s) 1483, 1735
BpmI CTGGAG 2 cut(s) 326, 476
Bpu10I CCTNAGC 1 cut(s) 651
Bpu14I TTCGAA 1 cut(s) 1071
BpuEI CTTGAG 3 cut(s) 200, 417, 1992
BpuMI CCSGG 3 cut(s) 311, 1090, 1830
BsaI GGTCTC 3 cut(s) 52, 381, 572
BsaJI CCNNGG 3 cut(s) 518, 1249, 1377
BsaWI WCCGGW 2 cut(s) 1522, 1982
BsaXI ACNNNNNCTCC 6 cut(s) 235, 265, 410, 440, 862, 892
Bsc4I CCNNNNNNNGG 3 cut(s) 345, 1255, 1818
Bse118I RCCGGY 1 cut(s) 1982
Bse1I ACTGG 3 cut(s) 551, 778, 2019
Bse21I CCTNAGG 2 cut(s) 378, 392
Bse3DI GCAATG 3 cut(s) 673, 1035, 1341
BseBI CCWGG 1 cut(s) 1050
BseDI CCNNGG 3 cut(s) 518, 1249, 1377
BseGI GGATG 8 cut(s) 768, 1085, 1188, 1267, 1531, 1588, 1702, 1923
BseLI CCNNNNNNNGG 3 cut(s) 345, 1255, 1818
BseMI GCAATG 3 cut(s) 673, 1035, 1341
BseMII CTCAG 5 cut(s) 60, 392, 406, 642, 1569
BseNI ACTGG 3 cut(s) 551, 778, 2019
BseRI GAGGAG 5 cut(s) 240, 418, 656, 668, 857
BseSI GKGCMC 1 cut(s) 1416
BseXI GCAGC 7 cut(s) 436, 1621, 1635, 1782, 1879, 1944, 2038
BseYI CCCAGC 1 cut(s) 935
BsgI GTGCAG 4 cut(s) 1104, 1887, 2037, 2144
Bsh1236I CGCG 1 cut(s) 1163
BshFI GGCC 5 cut(s) 314, 1201, 1312, 1376, 2018
BshNI GGYRCC 1 cut(s) 1985
BshTI ACCGGT 1 cut(s) 1982
BsiHKAI GWGCWC 3 cut(s) 1305, 1416, 1789
BsiSI CCGG 7 cut(s) 311, 1089, 1313, 1523, 1829, 1983, 1989
BslFI GGGAC 3 cut(s) 118, 541, 953
BslI CCNNNNNNNGG 3 cut(s) 345, 1255, 1818
BsmAI GTCTC 4 cut(s) 52, 381, 572, 1152
BsmBI CGTCTC 1 cut(s) 1152
BsmFI GGGAC 3 cut(s) 118, 541, 953
BsmI GAATGC 3 cut(s) 24, 440, 1369
BsnI GGCC 5 cut(s) 314, 1201, 1312, 1376, 2018
Bso31I GGTCTC 3 cut(s) 52, 381, 572
Bsp119I TTCGAA 1 cut(s) 1071
Bsp1286I GDGCHC 3 cut(s) 1305, 1416, 1789
Bsp1407I TGTACA 2 cut(s) 765, 1008
Bsp143I GATC 1 cut(s) 1131
Bsp19I CCATGG 2 cut(s) 518, 1377
BspACI CCGC 3 cut(s) 743, 804, 1180
BspANI GGCC 5 cut(s) 314, 1201, 1312, 1376, 2018
BspCNI CTCAG 5 cut(s) 59, 391, 405, 643, 1570
BspFNI CGCG 1 cut(s) 1163
BspHI TCATGA 1 cut(s) 1789
BspLI GGNNCC 2 cut(s) 1810, 1987
BspMAI CTGCAG 1 cut(s) 1717
BspMI ACCTGC 1 cut(s) 111
BspT104I TTCGAA 1 cut(s) 1071
BspT107I GGYRCC 1 cut(s) 1985
BspTNI GGTCTC 3 cut(s) 52, 381, 572
BsrBI CCGCTC 1 cut(s) 1180
BsrDI GCAATG 3 cut(s) 673, 1035, 1341
BsrFI RCCGGY 1 cut(s) 1982
BsrGI TGTACA 2 cut(s) 765, 1008
BsrI ACTGG 3 cut(s) 551, 778, 2019
BssAI RCCGGY 1 cut(s) 1982
BssECI CCNNGG 3 cut(s) 518, 1249, 1377
BssMI GATC 1 cut(s) 1131
BssSI CACGAG 1 cut(s) 1778
BssT1I CCWWGG 3 cut(s) 518, 1249, 1377
Bst2BI CACGAG 1 cut(s) 1778
Bst2UI CCWGG 1 cut(s) 1050
Bst4CI ACNGT 4 cut(s) 37, 422, 1307, 1551
Bst6I CTCTTC 3 cut(s) 1905, 1944, 2067
BstAUI TGTACA 2 cut(s) 765, 1008
BstBI TTCGAA 1 cut(s) 1071
BstC8I GCNNGC 3 cut(s) 648, 1607, 1614
BstDEI CTNAG 7 cut(s) 46, 378, 392, 651, 851, 1269, 1578
BstDSI CCRYGG 2 cut(s) 518, 1377
BstF5I GGATG 8 cut(s) 768, 1085, 1188, 1267, 1531, 1588, 1702, 1923
BstFNI CGCG 1 cut(s) 1163
BstH2I RGCGCY 2 cut(s) 358, 1958
BstHHI GCGC 3 cut(s) 357, 679, 1957
BstKTI GATC 1 cut(s) 1134
BstMAI GTCTC 4 cut(s) 52, 381, 572, 1152
BstMBI GATC 1 cut(s) 1131
BstMWI GCNNNNNNNGC 8 cut(s) 446, 631, 1151, 1160, 1300, 1309, 1373, 1901
BstNI CCWGG 1 cut(s) 1050
BstNSI RCATGY 1 cut(s) 538
BstSCI CCNGG 4 cut(s) 309, 1048, 1088, 1828
BstSFI CTRYAG 2 cut(s) 1306, 1713
BstSLI GKGCMC 1 cut(s) 1416
BstUI CGCG 1 cut(s) 1163
BstV1I GCAGC 7 cut(s) 436, 1621, 1635, 1782, 1879, 1944, 2038
BstV2I GAAGAC 2 cut(s) 1483, 1735
BstX2I RGATCY 1 cut(s) 1131
BstXI CCANNNNNNTGG 1 cut(s) 2027
BstYI RGATCY 1 cut(s) 1131
Bsu36I CCTNAGG 2 cut(s) 378, 392
BsuI GTATCC 1 cut(s) 1836
BsuRI GGCC 5 cut(s) 314, 1201, 1312, 1376, 2018
BtgI CCRYGG 2 cut(s) 518, 1377
BtsCI GGATG 8 cut(s) 768, 1085, 1188, 1267, 1531, 1588, 1702, 1923
BtsI GCAGTG 3 cut(s) 1710, 1899, 2145
BtsIMutI CAGTG 6 cut(s) 33, 1202, 1303, 1710, 1899, 2145
BveI ACCTGC 1 cut(s) 111
Cac8I GCNNGC 3 cut(s) 648, 1607, 1614
CaiI CAGNNNCTG 1 cut(s) 565
CciI TCATGA 1 cut(s) 1789
CfoI GCGC 3 cut(s) 357, 679, 1957
Cfr10I RCCGGY 1 cut(s) 1982
Cfr13I GGNCC 2 cut(s) 723, 2017
CseI GACGC 1 cut(s) 1169
Csp6I GTAC 3 cut(s) 15, 766, 1009
CspAI ACCGGT 1 cut(s) 1982
CviAII CATG 9 cut(s) 519, 535, 601, 610, 1378, 1426, 1602, 1790, 2036
CviQI GTAC 3 cut(s) 15, 766, 1009
DdeI CTNAG 7 cut(s) 46, 378, 392, 651, 851, 1269, 1578
DpnI GATC 1 cut(s) 1133
DpnII GATC 1 cut(s) 1131
EaeI YGGCCR 1 cut(s) 312
Eam1104I CTCTTC 3 cut(s) 1905, 1944, 2067
EarI CTCTTC 3 cut(s) 1905, 1944, 2067
Ecl136II GAGCTC 1 cut(s) 1787
Eco130I CCWWGG 3 cut(s) 518, 1249, 1377
Eco24I GRGCYC 1 cut(s) 1789
Eco31I GGTCTC 3 cut(s) 52, 381, 572
Eco47I GGWCC 1 cut(s) 723
Eco47III AGCGCT 1 cut(s) 356
Eco53kI GAGCTC 1 cut(s) 1787
Eco81I CCTNAGG 2 cut(s) 378, 392
EcoICRI GAGCTC 1 cut(s) 1787
EcoRI GAATTC 2 cut(s) 40, 1688
EcoRII CCWGG 1 cut(s) 1048
EcoT14I CCWWGG 3 cut(s) 518, 1249, 1377
EcoT38I GRGCYC 1 cut(s) 1789
ErhI CCWWGG 3 cut(s) 518, 1249, 1377
Esp3I CGTCTC 1 cut(s) 1152
FaeI CATG 9 cut(s) 522, 538, 604, 613, 1381, 1429, 1605, 1793, 2039
FaqI GGGAC 3 cut(s) 118, 541, 953
FatI CATG 9 cut(s) 518, 534, 600, 609, 1377, 1425, 1601, 1789, 2035
FblI GTMKAC 1 cut(s) 125
Fnu4HI GCNGC 8 cut(s) 6, 450, 1610, 1649, 1796, 1893, 1958, 2052
FokI GGATG 8 cut(s) 775, 1072, 1195, 1274, 1538, 1595, 1709, 1930
FriOI GRGCYC 1 cut(s) 1789
Fsp4HI GCNGC 8 cut(s) 6, 450, 1610, 1649, 1796, 1893, 1958, 2052
FspBI CTAG 7 cut(s) 12, 18, 876, 1059, 1155, 1805, 2100
GlaI GCGC 3 cut(s) 356, 678, 1956
GluI GCNGC 8 cut(s) 6, 450, 1610, 1649, 1796, 1893, 1958, 2052
GsaI CCCAGC 1 cut(s) 939
GsuI CTGGAG 2 cut(s) 326, 476
HaeII RGCGCY 2 cut(s) 358, 1958
HaeIII GGCC 5 cut(s) 314, 1201, 1312, 1376, 2018
HapII CCGG 7 cut(s) 311, 1089, 1313, 1523, 1829, 1983, 1989
HgaI GACGC 1 cut(s) 1169
HhaI GCGC 3 cut(s) 357, 679, 1957
Hin1II CATG 9 cut(s) 522, 538, 604, 613, 1381, 1429, 1605, 1793, 2039
Hin6I GCGC 3 cut(s) 355, 677, 1955
HinP1I GCGC 3 cut(s) 355, 677, 1955
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HindIII AAGCTT 1 cut(s) 728
HinfI GANTC 6 cut(s) 105, 425, 499, 1192, 1488, 1721
HpaII CCGG 7 cut(s) 311, 1089, 1313, 1523, 1829, 1983, 1989
HphI GGTGA 6 cut(s) 69, 100, 589, 805, 941, 1487
Hpy166II GTNNAC 7 cut(s) 126, 307, 885, 1009, 1414, 1547, 1835
Hpy188I TCNGA 5 cut(s) 49, 208, 386, 1300, 1623
Hpy188III TCNNGA 5 cut(s) 343, 434, 455, 1725, 1790
Hpy8I GTNNAC 7 cut(s) 126, 307, 885, 1009, 1414, 1547, 1835
HpyAV CCTTC 3 cut(s) 1030, 1399, 1744
HpyCH4III ACNGT 4 cut(s) 37, 422, 1307, 1551
HpyCH4IV ACGT 1 cut(s) 1016
HpyF10VI GCNNNNNNNGC 8 cut(s) 446, 631, 1151, 1160, 1300, 1309, 1373, 1901
HpyF3I CTNAG 7 cut(s) 46, 378, 392, 651, 851, 1269, 1578
HpySE526I ACGT 1 cut(s) 1016
Hsp92II CATG 9 cut(s) 522, 538, 604, 613, 1381, 1429, 1605, 1793, 2039
HspAI GCGC 3 cut(s) 355, 677, 1955
Kzo9I GATC 1 cut(s) 1131
LmnI GCTCC 2 cut(s) 643, 1177
Lsp1109I GCAGC 7 cut(s) 436, 1621, 1635, 1782, 1879, 1944, 2038
LweI GCATC 2 cut(s) 771, 1094
MaeI CTAG 7 cut(s) 12, 18, 876, 1059, 1155, 1805, 2100
MaeII ACGT 1 cut(s) 1016
MaeIII GTNAC 6 cut(s) 422, 595, 793, 1325, 1875, 2127
MalI GATC 1 cut(s) 1133
MbiI CCGCTC 1 cut(s) 1180
MboI GATC 1 cut(s) 1131
MfeI CAATTG 1 cut(s) 1741
MflI RGATCY 1 cut(s) 1131
MhlI GDGCHC 3 cut(s) 1305, 1416, 1789
MluCI AATT 9 cut(s) 40, 827, 997, 1169, 1677, 1688, 1741, 1935, 2000
MluI ACGCGT 1 cut(s) 1161
MlyI GAGTC 2 cut(s) 419, 1497
MmeI TCCRAC 1 cut(s) 1146
MseI TTAA 4 cut(s) 1128, 1518, 1680, 2152
MslI CAYNNNNRTG 2 cut(s) 1334, 1419
MspI CCGG 7 cut(s) 311, 1089, 1313, 1523, 1829, 1983, 1989
MspR9I CCNGG 4 cut(s) 311, 1050, 1090, 1830
MunI CAATTG 1 cut(s) 1741
Mva1269I GAATGC 3 cut(s) 24, 440, 1369
MvaI CCWGG 1 cut(s) 1050
MvnI CGCG 1 cut(s) 1163
MwoI GCNNNNNNNGC 8 cut(s) 446, 631, 1151, 1160, 1300, 1309, 1373, 1901
NciI CCSGG 3 cut(s) 311, 1090, 1830
NcoI CCATGG 2 cut(s) 518, 1377
NdeII GATC 1 cut(s) 1131
NlaIII CATG 9 cut(s) 522, 538, 604, 613, 1381, 1429, 1605, 1793, 2039
NlaIV GGNNCC 2 cut(s) 1810, 1987
NmuCI GTSAC 5 cut(s) 422, 595, 793, 1875, 2127
NspI RCATGY 1 cut(s) 538
NspV TTCGAA 1 cut(s) 1071
PagI TCATGA 1 cut(s) 1789
PciI ACATGT 1 cut(s) 534
PctI GAATGC 3 cut(s) 24, 440, 1369
PfeI GAWTC 4 cut(s) 105, 499, 1192, 1721
PinAI ACCGGT 1 cut(s) 1982
PkrI GCNGC 8 cut(s) 7, 451, 1611, 1650, 1797, 1894, 1959, 2053
PleI GAGTC 2 cut(s) 419, 1496
PpsI GAGTC 2 cut(s) 419, 1496
PscI ACATGT 1 cut(s) 534
Psp124BI GAGCTC 1 cut(s) 1789
Psp6I CCWGG 1 cut(s) 1048
PspFI CCCAGC 1 cut(s) 935
PspGI CCWGG 1 cut(s) 1048
PspN4I GGNNCC 2 cut(s) 1810, 1987
PspPI GGNCC 2 cut(s) 723, 2017
PstI CTGCAG 1 cut(s) 1717
PstNI CAGNNNCTG 1 cut(s) 565
PsuI RGATCY 1 cut(s) 1131
RsaI GTAC 3 cut(s) 16, 767, 1010
RsaNI GTAC 3 cut(s) 15, 766, 1009
RseI CAYNNNNRTG 2 cut(s) 1334, 1419
SacI GAGCTC 1 cut(s) 1789
SaqAI TTAA 4 cut(s) 1128, 1518, 1680, 2152
SatI GCNGC 8 cut(s) 6, 450, 1610, 1649, 1796, 1893, 1958, 2052
Sau3AI GATC 1 cut(s) 1131
Sau96I GGNCC 2 cut(s) 723, 2017
ScaI AGTACT 1 cut(s) 16
SchI GAGTC 2 cut(s) 419, 1497
ScrFI CCNGG 4 cut(s) 311, 1050, 1090, 1830
SduI GDGCHC 3 cut(s) 1305, 1416, 1789
SfaNI GCATC 2 cut(s) 771, 1094
SfcI CTRYAG 2 cut(s) 1306, 1713
SfuI TTCGAA 1 cut(s) 1071
SinI GGWCC 1 cut(s) 723
SmiMI CAYNNNNRTG 2 cut(s) 1334, 1419
SmlI CTYRAG 3 cut(s) 215, 432, 2007
SmoI CTYRAG 3 cut(s) 215, 432, 2007
SpeI ACTAGT 2 cut(s) 11, 17
Sse9I AATT 9 cut(s) 40, 827, 997, 1169, 1677, 1688, 1741, 1935, 2000
SsiI CCGC 3 cut(s) 743, 804, 1180
SspMI CTAG 7 cut(s) 12, 18, 876, 1059, 1155, 1805, 2100
SstI GAGCTC 1 cut(s) 1789
StyD4I CCNGG 4 cut(s) 309, 1048, 1088, 1828
StyI CCWWGG 3 cut(s) 518, 1249, 1377
TaaI ACNGT 4 cut(s) 37, 422, 1307, 1551
TaiI ACGT 1 cut(s) 1019
TaqI TCGA 5 cut(s) 735, 1071, 1190, 1281, 1486
TasI AATT 9 cut(s) 40, 827, 997, 1169, 1677, 1688, 1741, 1935, 2000
TatI WGTACW 3 cut(s) 14, 765, 1008
TfiI GAWTC 4 cut(s) 105, 499, 1192, 1721
Tru1I TTAA 4 cut(s) 1128, 1518, 1680, 2152
Tru9I TTAA 4 cut(s) 1128, 1518, 1680, 2152
TscAI CASTG 6 cut(s) 40, 1202, 1310, 1717, 1906, 2152
TseFI GTSAC 5 cut(s) 422, 595, 793, 1875, 2127
TseI GCWGC 8 cut(s) 5, 449, 1609, 1648, 1795, 1892, 1957, 2051
Tsp45I GTSAC 5 cut(s) 422, 595, 793, 1875, 2127
TspDTI ATGAA 4 cut(s) 617, 1304, 1590, 2013
TspRI CASTG 6 cut(s) 40, 1202, 1310, 1717, 1906, 2152
VneI GTGCAC 1 cut(s) 1412
VpaK11BI GGWCC 1 cut(s) 723
XapI RAATTY 3 cut(s) 40, 1688, 2000
XceI RCATGY 1 cut(s) 538
XmiI GTMKAC 1 cut(s) 125
XspI CTAG 7 cut(s) 12, 18, 876, 1059, 1155, 1805, 2100
ZrmI AGTACT 1 cut(s) 16
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.