Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0008441

Physical Location & Seq

Genomic Coordinates Forward (+)

27430576 .. 27431811

Gene Structure 1236 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0282600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1191 bp

ATGCTTGTTGATGGCATTGAAACATGGGCGCCGCAGCTGCAGATGAAAAGGGTTGTGGTGGACTTTTCGTCTCCAAATATAGCAAAAGAGATGCATGTTGGTCACTTGAGATCCACCATCATTGGGGACACAATAGCACGCATGCTTGAGTTTTCGAACGTTCAAGTTCTTCGAAGGAATCATGTAGGTGATTGGGGAACGCAGTTTGGTATTTTGATCGAGTCCCTTGTGGAAAAGTACCCGGAGTTGGAAGATTTTAGCGGAATAGCCATTGGAGATCTGCAGGTTTTGTATAAAGAAGCCAATGATAGATTTAAAAGTGATCCCGAGTTTAAGGATTCGGCACGAAAGGCAGTGGCGTGGGAGCAAATCTGTGAAACTAGTCGGACAGAATTTCAGAAGATTTATCAACGCCTTGGAGTTGAGTTGGAGGAAAAGGGAGAAAGCTTTTACAACCAGTATATTCCTGGGGTTTTAAAGGAGTTGACTGACAAAGAGTTGTTGATTAAGGACAATGGAAACGAAACCAAGAGTGATGCAAGTGATACGAAAGAGAAAAGCAAGAGTGTTGCAAGTGATGAGGAAGGGAAAAGCAAGAGTGCAATGCAAAAGTGCAACTTAAGGCCTCTTGTGATCTCTATTAAAGGTTGTAATGTTCCACTGATTGTTGTGAAGAGTGATGGAGGCTACAACTATGCGACAACCGATTTGGCAGCTCTTTGGTATCGGCTAAATGAAGAGAAAGCTGAGTGGGTTATATATGTTACTGGTAATGAGACATCCCAGAAGGATTACTTGCATAAGATTTTCAAGGCAGCTCAGTGTGCAGGTTGGCTCCCAGCTGATGAAGGCAGGTCATTATATCCAAAAGCTAGCCATGTTGGTTTTGGTCTTGTTTGTGGAGCAGATGCCAAACCCCTCCGGACTTGCTGCGCCAATGTGGTTAGATTAGTTGATTTACTGGATGAAGCGAAGAACCGCAGCAAAGCAGCTCTAATTGAGCGGGGTAAAGCTAAAGGTAAAAAGTGGGATGAAGATGAGCTTGAGCGAACCGCAGAGGCTGTTGGTTATGGTGCTGTTAAGTATGCTGACCTGAAGAATAGTAGATGTAGCAAATACAAGTTCGATTTTGATCAGATGCTAAATGATAAGGGAAACACTGCAGTTTACATGCTCGGATCTGTTCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003712 GO:0003713 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005672 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0016591 GO:0017025 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022607 GO:0030880 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051090 GO:0051091 GO:0051123 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0055029 GO:0060255 GO:0061695 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0070013 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0090575 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03022 ko05203 map03022 map05203

Pfam Domains

Protein Families

TFIIA_gamma_C TFIIA_gamma_N

Protein Analysis

396

Amino Acids

44.44

Weight (kDa)

5.92

Isoelectric Point (pI)

28.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1d	PF00750	14 - 174	3.9e-51	tRNA synthetases class I (R), catalytic domain
tRNA-synt_1d	PF00750	210 - 377	1.5e-39	tRNA synthetases class I (R), catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24440 AT4G24440
fragaria_vesca	FvH4_5g34180
malus_domestica	MD08G1203900.v1.1
prunus_persica	Prupe.1G536300_v2.0.a1
pyrus_communis	pycom08g17590
rosa_chinensis	RchiOBHm_Chr5g0012851 RchiOBHm_Chr7g0233761
rosa_laevigata	RLG00000001236 RLG00000031961
rosa_multiflora	Rmu_sc0002365.1_g000032
rosa_roxburghii	Rroxscaffold_1G00063750 Rroxscaffold_3G00227010
rosa_rugosa	Rorug07G0282500 Rorug07G0282600
rosa_samantha	Rh5AG098600 Rh5CG107500 Rh7BG128400 Rh7BG411500
rosa_wichuraiana	Rw1G012030 Rw5G008620 Rw7G028720 Rw7G036250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	274, 818, 843
AccB1I	GGYRCC	1 cut(s)	28
AccBSI	CCGCTC	1 cut(s)	1003
AccIII	TCCGGA	1 cut(s)	921
AciI	CCGC	5 cut(s)	32, 261, 979, 1003, 1053
AclI	AACGTT	1 cut(s)	159
AclWI	GGATC	3 cut(s)	105, 317, 1186
AcsI	RAATTY	1 cut(s)	392
AcuI	CTGAAG	1 cut(s)	1115
AcyI	GRCGYC	1 cut(s)	29
AfaI	GTAC	1 cut(s)	239
AfiI	CCNNNNNNNGG	2 cut(s)	123, 247
AflII	CTTAAG	1 cut(s)	619
AgsI	TTSAA	3 cut(s)	20, 164, 811
AhdI	GACNNNNNGTC	1 cut(s)	67
AhlI	ACTAGT	1 cut(s)	380
AjnI	CCWGG	1 cut(s)	466
Alw26I	GTCTC	2 cut(s)	75, 770
AlwI	GGATC	3 cut(s)	105, 317, 1186
AlwNI	CAGNNNCTG	1 cut(s)	1061
Ama87I	CYCGRG	1 cut(s)	326
Aor13HI	TCCGGA	1 cut(s)	921
AoxI	GGCC	1 cut(s)	623
ApeKI	GCWGC	7 cut(s)	34, 37, 713, 815, 930, 981, 989
ApoI	RAATTY	1 cut(s)	392
ArsI	GACNNNNNNTTYG	2 cut(s)	691, 723
AspLEI	GCGC	2 cut(s)	31, 935
AsuC2I	CCSGG	1 cut(s)	242
AsuHPI	GGTGA	1 cut(s)	200
AsuII	TTCGAA	2 cut(s)	155, 172
AsuNHI	GCTAGC	1 cut(s)	872
AvaI	CYCGRG	1 cut(s)	326
BanI	GGYRCC	1 cut(s)	28
BbvI	GCAGC	7 cut(s)	24, 46, 725, 827, 917, 993, 1001
BccI	CCATC	3 cut(s)	5, 125, 674
BciT130I	CCWGG	1 cut(s)	468
BclI	TGATCA	1 cut(s)	1132
BcnI	CCSGG	1 cut(s)	242
BcoDI	GTCTC	2 cut(s)	75, 770
BcuI	ACTAGT	1 cut(s)	380
BfaI	CTAG	2 cut(s)	381, 873
BfmI	CTRYAG	3 cut(s)	38, 281, 1161
BfoI	RGCGCY	1 cut(s)	32
BfrI	CTTAAG	1 cut(s)	619
BfuAI	ACCTGC	3 cut(s)	274, 818, 843
BglII	AGATCT	1 cut(s)	277
BisI	GCNGC	8 cut(s)	32, 35, 38, 714, 816, 931, 982, 990
BlsI	GCNGC	8 cut(s)	33, 36, 39, 715, 817, 932, 983, 991
Bme1390I	CCNGG	2 cut(s)	242, 468
BmeRI	GACNNNNNGTC	1 cut(s)	67
BmeT110I	CYCGRG	1 cut(s)	326
BmiI	GGNNCC	2 cut(s)	30, 836
BmrFI	CCNGG	2 cut(s)	242, 468
BmsI	GCATC	4 cut(s)	81, 526, 898, 1128
BmtI	GCTAGC	1 cut(s)	876
Bpu14I	TTCGAA	2 cut(s)	155, 172
BpuEI	CTTGAG	3 cut(s)	127, 167, 1064
BpuMI	CCSGG	1 cut(s)	242
BsaBI	GATNNNNATC	1 cut(s)	1131
BsaHI	GRCGYC	1 cut(s)	29
BsaJI	CCNNGG	2 cut(s)	415, 467
BsaWI	WCCGGW	1 cut(s)	921
Bsc4I	CCNNNNNNNGG	2 cut(s)	123, 247
Bse1I	ACTGG	3 cut(s)	457, 772, 966
Bse3DI	GCAATG	1 cut(s)	609
Bse8I	GATNNNNATC	1 cut(s)	1131
BseAI	TCCGGA	1 cut(s)	921
BseBI	CCWGG	1 cut(s)	468
BseDI	CCNNGG	2 cut(s)	415, 467
BseGI	GGATG	3 cut(s)	779, 970, 1036
BseJI	GATNNNNATC	1 cut(s)	1131
BseLI	CCNNNNNNNGG	2 cut(s)	123, 247
BseMI	GCAATG	1 cut(s)	609
BseMII	CTCAG	2 cut(s)	738, 833
BseNI	ACTGG	3 cut(s)	457, 772, 966
BseXI	GCAGC	7 cut(s)	24, 46, 725, 827, 917, 993, 1001
BseYI	CCCAGC	1 cut(s)	838
BsgI	GTGCAG	1 cut(s)	846
BshFI	GGCC	1 cut(s)	625
BshNI	GGYRCC	1 cut(s)	28
BsiHKCI	CYCGRG	1 cut(s)	326
BsiSI	CCGG	2 cut(s)	242, 922
BslFI	GGGAC	2 cut(s)	140, 208
BslI	CCNNNNNNNGG	2 cut(s)	123, 247
BsmAI	GTCTC	2 cut(s)	75, 770
BsmBI	CGTCTC	1 cut(s)	75
BsmFI	GGGAC	2 cut(s)	140, 208
BsnI	GGCC	1 cut(s)	625
BsoBI	CYCGRG	1 cut(s)	326
Bsp119I	TTCGAA	2 cut(s)	155, 172
Bsp13I	TCCGGA	1 cut(s)	921
Bsp143I	GATC	7 cut(s)	110, 216, 277, 322, 633, 1132, 1178
BspACI	CCGC	5 cut(s)	32, 261, 979, 1003, 1053
BspANI	GGCC	1 cut(s)	625
BspCNI	CTCAG	2 cut(s)	739, 832
BspEI	TCCGGA	1 cut(s)	921
BspLI	GGNNCC	2 cut(s)	30, 836
BspMAI	CTGCAG	3 cut(s)	42, 285, 1165
BspMI	ACCTGC	3 cut(s)	274, 818, 843
BspOI	GCTAGC	1 cut(s)	876
BspPI	GGATC	3 cut(s)	105, 317, 1186
BspT104I	TTCGAA	2 cut(s)	155, 172
BspT107I	GGYRCC	1 cut(s)	28
BspTI	CTTAAG	1 cut(s)	619
BsrBI	CCGCTC	1 cut(s)	1003
BsrDI	GCAATG	1 cut(s)	609
BsrI	ACTGG	3 cut(s)	457, 772, 966
BssECI	CCNNGG	2 cut(s)	415, 467
BssMI	GATC	7 cut(s)	110, 216, 277, 322, 633, 1132, 1178
BssNI	GRCGYC	1 cut(s)	29
BssT1I	CCWWGG	1 cut(s)	415
Bst2UI	CCWGG	1 cut(s)	468
Bst6I	CTCTTC	2 cut(s)	668, 732
BstACI	GRCGYC	1 cut(s)	29
BstAFI	CTTAAG	1 cut(s)	619
BstBI	TTCGAA	2 cut(s)	155, 172
BstC8I	GCNNGC	3 cut(s)	139, 143, 874
BstDEI	CTNAG	2 cut(s)	747, 819
BstF5I	GGATG	3 cut(s)	779, 970, 1036
BstH2I	RGCGCY	1 cut(s)	32
BstHHI	GCGC	2 cut(s)	31, 935
BstKTI	GATC	7 cut(s)	113, 219, 280, 325, 636, 1135, 1181
BstMAI	GTCTC	2 cut(s)	75, 770
BstMBI	GATC	7 cut(s)	110, 216, 277, 322, 633, 1132, 1178
BstMWI	GCNNNNNNNGC	3 cut(s)	37, 350, 824
BstNI	CCWGG	1 cut(s)	468
BstNSI	RCATGY	3 cut(s)	98, 145, 1174
BstSCI	CCNGG	2 cut(s)	240, 466
BstSFI	CTRYAG	3 cut(s)	38, 281, 1161
BstV1I	GCAGC	7 cut(s)	24, 46, 725, 827, 917, 993, 1001
BstX2I	RGATCY	3 cut(s)	110, 277, 1178
BstYI	RGATCY	3 cut(s)	110, 277, 1178
BsuRI	GGCC	1 cut(s)	625
BtsCI	GGATG	3 cut(s)	779, 970, 1036
BtsI	GCAGTG	2 cut(s)	360, 1158
BtsIMutI	CAGTG	4 cut(s)	360, 659, 827, 1158
BveI	ACCTGC	3 cut(s)	274, 818, 843
Cac8I	GCNNGC	3 cut(s)	139, 143, 874
CaiI	CAGNNNCTG	1 cut(s)	1061
CfoI	GCGC	2 cut(s)	31, 935
Csp6I	GTAC	1 cut(s)	238
CspCI	CAANNNNNGTGG	2 cut(s)	103, 138
CviAII	CATG	6 cut(s)	24, 95, 142, 182, 878, 1171
CviQI	GTAC	1 cut(s)	238
DdeI	CTNAG	2 cut(s)	747, 819
DinI	GGCGCC	1 cut(s)	30
DpnI	GATC	7 cut(s)	112, 218, 279, 324, 635, 1134, 1180
DpnII	GATC	7 cut(s)	110, 216, 277, 322, 633, 1132, 1178
DraI	TTTAAA	2 cut(s)	316, 477
DriI	GACNNNNNGTC	1 cut(s)	67
Eam1104I	CTCTTC	2 cut(s)	668, 732
Eam1105I	GACNNNNNGTC	1 cut(s)	67
EarI	CTCTTC	2 cut(s)	668, 732
Eco130I	CCWWGG	1 cut(s)	415
Eco147I	AGGCCT	1 cut(s)	625
Eco57I	CTGAAG	1 cut(s)	1115
Eco88I	CYCGRG	1 cut(s)	326
EcoRII	CCWGG	1 cut(s)	466
EcoT14I	CCWWGG	1 cut(s)	415
EcoT22I	ATGCAT	1 cut(s)	96
EgeI	GGCGCC	1 cut(s)	30
EheI	GGCGCC	1 cut(s)	30
ErhI	CCWWGG	1 cut(s)	415
Esp3I	CGTCTC	1 cut(s)	75
FaeI	CATG	6 cut(s)	27, 98, 145, 185, 881, 1174
FalI	AAGNNNNNCTT	6 cut(s)	602, 634, 779, 811, 1026, 1058
FaqI	GGGAC	2 cut(s)	140, 208
FatI	CATG	6 cut(s)	23, 94, 141, 181, 877, 1170
FauI	CCCGC	1 cut(s)	996
FbaI	TGATCA	1 cut(s)	1132
Fnu4HI	GCNGC	8 cut(s)	32, 35, 38, 714, 816, 931, 982, 990
FokI	GGATG	3 cut(s)	766, 977, 1043
Fsp4HI	GCNGC	8 cut(s)	32, 35, 38, 714, 816, 931, 982, 990
FspBI	CTAG	2 cut(s)	381, 873
GlaI	GCGC	2 cut(s)	30, 934
GluI	GCNGC	8 cut(s)	32, 35, 38, 714, 816, 931, 982, 990
GsaI	CCCAGC	1 cut(s)	842
HaeII	RGCGCY	1 cut(s)	32
HaeIII	GGCC	1 cut(s)	625
HapII	CCGG	2 cut(s)	242, 922
HhaI	GCGC	2 cut(s)	31, 935
Hin1I	GRCGYC	1 cut(s)	29
Hin1II	CATG	6 cut(s)	27, 98, 145, 185, 881, 1174
Hin6I	GCGC	2 cut(s)	29, 933
HinP1I	GCGC	2 cut(s)	29, 933
HincII	GTYRAC	1 cut(s)	486
HindII	GTYRAC	1 cut(s)	486
HindIII	AAGCTT	1 cut(s)	445
HinfI	GANTC	3 cut(s)	178, 221, 338
HpaII	CCGG	2 cut(s)	242, 922
HphI	GGTGA	1 cut(s)	200
Hpy166II	GTNNAC	3 cut(s)	61, 486, 1168
Hpy188I	TCNGA	4 cut(s)	387, 399, 1137, 1178
Hpy188III	TCNNGA	2 cut(s)	326, 922
Hpy8I	GTNNAC	3 cut(s)	61, 486, 1168
HpyAV	CCTTC	4 cut(s)	168, 578, 781, 842
HpyCH4IV	ACGT	1 cut(s)	159
HpyF10VI	GCNNNNNNNGC	3 cut(s)	37, 350, 824
HpyF3I	CTNAG	2 cut(s)	747, 819
HpySE526I	ACGT	1 cut(s)	159
Hsp92I	GRCGYC	1 cut(s)	29
Hsp92II	CATG	6 cut(s)	27, 98, 145, 185, 881, 1174
HspAI	GCGC	2 cut(s)	29, 933
KasI	GGCGCC	1 cut(s)	28
Kpn2I	TCCGGA	1 cut(s)	921
Ksp22I	TGATCA	1 cut(s)	1132
Kzo9I	GATC	7 cut(s)	110, 216, 277, 322, 633, 1132, 1178
LmnI	GCTCC	3 cut(s)	364, 840, 902
Lsp1109I	GCAGC	7 cut(s)	24, 46, 725, 827, 917, 993, 1001
LweI	GCATC	4 cut(s)	81, 526, 898, 1128
MaeI	CTAG	2 cut(s)	381, 873
MaeII	ACGT	1 cut(s)	159
MaeIII	GTNAC	2 cut(s)	101, 763
MalI	GATC	7 cut(s)	112, 218, 279, 324, 635, 1134, 1180
MbiI	CCGCTC	1 cut(s)	1003
MboI	GATC	7 cut(s)	110, 216, 277, 322, 633, 1132, 1178
MboII	GAAGA	8 cut(s)	161, 263, 412, 685, 749, 985, 1046, 1108
MflI	RGATCY	3 cut(s)	110, 277, 1178
MluCI	AATT	2 cut(s)	392, 996
Mly113I	GGCGCC	1 cut(s)	29
MlyI	GAGTC	1 cut(s)	230
MmeI	TCCRAC	3 cut(s)	228, 365, 408
MnlI	CCTC	6 cut(s)	424, 574, 636, 677, 929, 1051
Mph1103I	ATGCAT	1 cut(s)	96
MroI	TCCGGA	1 cut(s)	921
MseI	TTAA	7 cut(s)	315, 333, 476, 507, 620, 642, 1080
MslI	CAYNNNNRTG	1 cut(s)	186
MspA1I	CMGCKG	2 cut(s)	37, 842
MspCI	CTTAAG	1 cut(s)	619
MspI	CCGG	2 cut(s)	242, 922
MspR9I	CCNGG	2 cut(s)	242, 468
MvaI	CCWGG	1 cut(s)	468
MwoI	GCNNNNNNNGC	3 cut(s)	37, 350, 824
NarI	GGCGCC	1 cut(s)	29
NciI	CCSGG	1 cut(s)	242
NdeII	GATC	7 cut(s)	110, 216, 277, 322, 633, 1132, 1178
NheI	GCTAGC	1 cut(s)	872
NlaIII	CATG	6 cut(s)	27, 98, 145, 185, 881, 1174
NlaIV	GGNNCC	2 cut(s)	30, 836
NmuCI	GTSAC	1 cut(s)	101
NsiI	ATGCAT	1 cut(s)	96
NspI	RCATGY	3 cut(s)	98, 145, 1174
NspV	TTCGAA	2 cut(s)	155, 172
PaeI	GCATGC	1 cut(s)	145
PceI	AGGCCT	1 cut(s)	625
PfeI	GAWTC	2 cut(s)	178, 338
PkrI	GCNGC	8 cut(s)	33, 36, 39, 715, 817, 932, 983, 991
PleI	GAGTC	1 cut(s)	229
PluTI	GGCGCC	1 cut(s)	32
PpsI	GAGTC	1 cut(s)	229
Psp1406I	AACGTT	1 cut(s)	159
Psp6I	CCWGG	1 cut(s)	466
PspFI	CCCAGC	1 cut(s)	838
PspGI	CCWGG	1 cut(s)	466
PspN4I	GGNNCC	2 cut(s)	30, 836
PstI	CTGCAG	3 cut(s)	42, 285, 1165
PstNI	CAGNNNCTG	1 cut(s)	1061
PsuI	RGATCY	3 cut(s)	110, 277, 1178
PvuII	CAGCTG	2 cut(s)	37, 842
RsaI	GTAC	1 cut(s)	239
RsaNI	GTAC	1 cut(s)	238
RseI	CAYNNNNRTG	1 cut(s)	186
SaqAI	TTAA	7 cut(s)	315, 333, 476, 507, 620, 642, 1080
SatI	GCNGC	8 cut(s)	32, 35, 38, 714, 816, 931, 982, 990
Sau3AI	GATC	7 cut(s)	110, 216, 277, 322, 633, 1132, 1178
SchI	GAGTC	1 cut(s)	230
ScrFI	CCNGG	2 cut(s)	242, 468
SfaNI	GCATC	4 cut(s)	81, 526, 898, 1128
SfcI	CTRYAG	3 cut(s)	38, 281, 1161
SfoI	GGCGCC	1 cut(s)	30
SfuI	TTCGAA	2 cut(s)	155, 172
SmiMI	CAYNNNNRTG	1 cut(s)	186
SmlI	CTYRAG	4 cut(s)	106, 146, 619, 1043
SmoI	CTYRAG	4 cut(s)	106, 146, 619, 1043
SpeI	ACTAGT	1 cut(s)	380
SphI	GCATGC	1 cut(s)	145
Sse9I	AATT	2 cut(s)	392, 996
SseBI	AGGCCT	1 cut(s)	625
SsiI	CCGC	5 cut(s)	32, 261, 979, 1003, 1053
SspDI	GGCGCC	1 cut(s)	28
SspMI	CTAG	2 cut(s)	381, 873
StuI	AGGCCT	1 cut(s)	625
StyD4I	CCNGG	2 cut(s)	240, 466
StyI	CCWWGG	1 cut(s)	415
TaiI	ACGT	1 cut(s)	162
TaqI	TCGA	4 cut(s)	155, 172, 219, 1125
TasI	AATT	2 cut(s)	392, 996
TauI	GCSGC	1 cut(s)	34
TfiI	GAWTC	2 cut(s)	178, 338
Tru1I	TTAA	7 cut(s)	315, 333, 476, 507, 620, 642, 1080
Tru9I	TTAA	7 cut(s)	315, 333, 476, 507, 620, 642, 1080
TscAI	CASTG	4 cut(s)	360, 666, 827, 1165
TseFI	GTSAC	1 cut(s)	101
TseI	GCWGC	7 cut(s)	34, 37, 713, 815, 930, 981, 989
Tsp45I	GTSAC	1 cut(s)	101
TspDTI	ATGAA	5 cut(s)	59, 750, 861, 981, 1047
TspRI	CASTG	4 cut(s)	360, 666, 827, 1165
Vha464I	CTTAAG	1 cut(s)	619
XapI	RAATTY	1 cut(s)	392
XceI	RCATGY	3 cut(s)	98, 145, 1174
XcmI	CCANNNNNNNNNTGG	2 cut(s)	464, 884
XspI	CTAG	2 cut(s)	381, 873
Zsp2I	ATGCAT	1 cut(s)	96

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.