DNA-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g08170 FvH4_7g08170 |
| rosa_chinensis | RchiOBHm_Chr1g0342801 |
| rosa_multiflora | Rmu_sc0000124.1_g000026 Rmu_sc0004202.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00294560 |
| rosa_rugosa | Rorug01G0166000 Rorug01G0166100 Rorug01G0166200 |
| rosa_samantha | Rh1AG161500 Rh1AG181900 Rh1BG130900 Rh1CG168700 |
| rosa_wichuraiana | Rw1G013370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 116 |
| AclWI | GGATC | 1 cut(s) | 43 |
| AdeI | CACNNNGTG | 1 cut(s) | 251 |
| AfaI | GTAC | 2 cut(s) | 45, 172 |
| AjnI | CCWGG | 2 cut(s) | 233, 247 |
| AlwI | GGATC | 1 cut(s) | 43 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 152 |
| AspS9I | GGNCC | 2 cut(s) | 131, 149 |
| AsuHPI | GGTGA | 2 cut(s) | 237, 263 |
| AvaII | GGWCC | 2 cut(s) | 131, 149 |
| BciT130I | CCWGG | 2 cut(s) | 235, 249 |
| BfmI | CTRYAG | 1 cut(s) | 144 |
| Bme1390I | CCNGG | 2 cut(s) | 235, 249 |
| Bme18I | GGWCC | 2 cut(s) | 131, 149 |
| BmgT120I | GGNCC | 2 cut(s) | 131, 149 |
| BmrFI | CCNGG | 2 cut(s) | 235, 249 |
| BmsI | GCATC | 1 cut(s) | 228 |
| BsaJI | CCNNGG | 2 cut(s) | 55, 233 |
| Bse1I | ACTGG | 1 cut(s) | 211 |
| Bse3DI | GCAATG | 1 cut(s) | 111 |
| BseBI | CCWGG | 2 cut(s) | 235, 249 |
| BseDI | CCNNGG | 2 cut(s) | 55, 233 |
| BseGI | GGATG | 1 cut(s) | 243 |
| BseMI | GCAATG | 1 cut(s) | 111 |
| BseMII | CTCAG | 1 cut(s) | 91 |
| BseNI | ACTGG | 1 cut(s) | 211 |
| Bsp1407I | TGTACA | 1 cut(s) | 43 |
| Bsp143I | GATC | 1 cut(s) | 35 |
| BspACI | CCGC | 1 cut(s) | 116 |
| BspCNI | CTCAG | 1 cut(s) | 90 |
| BspMAI | CTGCAG | 1 cut(s) | 148 |
| BspPI | GGATC | 1 cut(s) | 43 |
| BsrDI | GCAATG | 1 cut(s) | 111 |
| BsrGI | TGTACA | 1 cut(s) | 43 |
| BsrI | ACTGG | 1 cut(s) | 211 |
| BssECI | CCNNGG | 2 cut(s) | 55, 233 |
| BssMI | GATC | 1 cut(s) | 35 |
| BssT1I | CCWWGG | 1 cut(s) | 55 |
| Bst2UI | CCWGG | 2 cut(s) | 235, 249 |
| Bst6I | CTCTTC | 1 cut(s) | 290 |
| BstAUI | TGTACA | 1 cut(s) | 43 |
| BstDEI | CTNAG | 1 cut(s) | 77 |
| BstF5I | GGATG | 1 cut(s) | 243 |
| BstKTI | GATC | 1 cut(s) | 38 |
| BstMBI | GATC | 1 cut(s) | 35 |
| BstNI | CCWGG | 2 cut(s) | 235, 249 |
| BstSCI | CCNGG | 2 cut(s) | 233, 247 |
| BstSFI | CTRYAG | 1 cut(s) | 144 |
| BstX2I | RGATCY | 1 cut(s) | 35 |
| BstYI | RGATCY | 1 cut(s) | 35 |
| BtsCI | GGATG | 1 cut(s) | 243 |
| BtsIMutI | CAGTG | 1 cut(s) | 85 |
| CaiI | CAGNNNCTG | 1 cut(s) | 152 |
| Cfr13I | GGNCC | 2 cut(s) | 131, 149 |
| CsiI | ACCWGGT | 1 cut(s) | 247 |
| Csp6I | GTAC | 2 cut(s) | 44, 171 |
| CviJI | RGCY | 3 cut(s) | 76, 224, 265 |
| CviKI_1 | RGCY | 3 cut(s) | 76, 224, 265 |
| CviQI | GTAC | 2 cut(s) | 44, 171 |
| DdeI | CTNAG | 1 cut(s) | 77 |
| DpnI | GATC | 1 cut(s) | 37 |
| DpnII | GATC | 1 cut(s) | 35 |
| DraIII | CACNNNGTG | 1 cut(s) | 251 |
| Eam1104I | CTCTTC | 1 cut(s) | 290 |
| EarI | CTCTTC | 1 cut(s) | 290 |
| Eco130I | CCWWGG | 1 cut(s) | 55 |
| Eco47I | GGWCC | 2 cut(s) | 131, 149 |
| EcoO109I | RGGNCCY | 1 cut(s) | 149 |
| EcoRII | CCWGG | 2 cut(s) | 233, 247 |
| EcoT14I | CCWWGG | 1 cut(s) | 55 |
| ErhI | CCWWGG | 1 cut(s) | 55 |
| FaiI | YATR | 3 cut(s) | 48, 175, 300 |
| FauI | CCCGC | 1 cut(s) | 109 |
| FokI | GGATG | 1 cut(s) | 250 |
| HinfI | GANTC | 1 cut(s) | 282 |
| HphI | GGTGA | 2 cut(s) | 237, 263 |
| Hpy166II | GTNNAC | 2 cut(s) | 131, 281 |
| Hpy188I | TCNGA | 1 cut(s) | 180 |
| Hpy188III | TCNNGA | 1 cut(s) | 289 |
| Hpy8I | GTNNAC | 2 cut(s) | 131, 281 |
| HpyCH4V | TGCA | 1 cut(s) | 146 |
| HpyF3I | CTNAG | 1 cut(s) | 77 |
| Kzo9I | GATC | 1 cut(s) | 35 |
| LweI | GCATC | 1 cut(s) | 228 |
| MabI | ACCWGGT | 1 cut(s) | 247 |
| MalI | GATC | 1 cut(s) | 37 |
| MboI | GATC | 1 cut(s) | 35 |
| MboII | GAAGA | 3 cut(s) | 219, 277, 304 |
| MflI | RGATCY | 1 cut(s) | 35 |
| MlyI | GAGTC | 1 cut(s) | 276 |
| MnlI | CCTC | 1 cut(s) | 214 |
| MseI | TTAA | 1 cut(s) | 183 |
| MspR9I | CCNGG | 2 cut(s) | 235, 249 |
| MvaI | CCWGG | 2 cut(s) | 235, 249 |
| NdeII | GATC | 1 cut(s) | 35 |
| PleI | GAGTC | 1 cut(s) | 276 |
| PpsI | GAGTC | 1 cut(s) | 276 |
| PpuMI | RGGWCCY | 1 cut(s) | 149 |
| Psp5II | RGGWCCY | 1 cut(s) | 149 |
| Psp6I | CCWGG | 2 cut(s) | 233, 247 |
| PspGI | CCWGG | 2 cut(s) | 233, 247 |
| PspPI | GGNCC | 2 cut(s) | 131, 149 |
| PspPPI | RGGWCCY | 1 cut(s) | 149 |
| PstI | CTGCAG | 1 cut(s) | 148 |
| PstNI | CAGNNNCTG | 1 cut(s) | 152 |
| PsuI | RGATCY | 1 cut(s) | 35 |
| RsaI | GTAC | 2 cut(s) | 45, 172 |
| RsaNI | GTAC | 2 cut(s) | 44, 171 |
| SaqAI | TTAA | 1 cut(s) | 183 |
| Sau3AI | GATC | 1 cut(s) | 35 |
| Sau96I | GGNCC | 2 cut(s) | 131, 149 |
| SchI | GAGTC | 1 cut(s) | 276 |
| ScrFI | CCNGG | 2 cut(s) | 235, 249 |
| SetI | ASST | 5 cut(s) | 11, 57, 154, 162, 253 |
| SexAI | ACCWGGT | 1 cut(s) | 247 |
| SfaNI | GCATC | 1 cut(s) | 228 |
| SfcI | CTRYAG | 1 cut(s) | 144 |
| SinI | GGWCC | 2 cut(s) | 131, 149 |
| SsiI | CCGC | 1 cut(s) | 116 |
| StyD4I | CCNGG | 2 cut(s) | 233, 247 |
| StyI | CCWWGG | 1 cut(s) | 55 |
| TatI | WGTACW | 1 cut(s) | 43 |
| Tru1I | TTAA | 1 cut(s) | 183 |
| Tru9I | TTAA | 1 cut(s) | 183 |
| TscAI | CASTG | 1 cut(s) | 85 |
| TspDTI | ATGAA | 2 cut(s) | 17, 270 |
| TspRI | CASTG | 1 cut(s) | 85 |
| VpaK11BI | GGWCC | 2 cut(s) | 131, 149 |