Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0005329

Physical Location & Seq

Genomic Coordinates Reverse (-)

5730213 .. 5733174

Gene Structure 2962 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG028600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGGATATGGCACCAAACACAAAATATCTCCAAAACACAACTTCCTTGGGACACAGTTCACTCATCACTCTTCTACACTGCTGTATGGCCATCACCACCGGCATATGTTCATCACCAAACCAACCTCCAACTCTCCCCACACTTTCACTCTCAACCATCTCACCACTCAAAACCCACTTGCCTTTTCCCTCCTCCAAATTTGGCGCCAACTTAGTCTCCAGCGATGCATTGGTCAATGGAGCTGCAGCGGAGGCAGTGGCGCTGGCACGCGCTGTGGCAGAGGTGACCAGAGATGCCGCGGCGGTGAGGGAAGGTATTAGTGATGTTTGGAGTTGCAATGAGAGTGGGAATGAGAGGGGTGGTGGATTGATGGCGAGGAGGAAGAAGAGGAGGAGGAGGAAAGGGTTGGAGTGTTTTGATGATGAGGAGAGGAAGAGGGAGTTTGAAGATGAGAGGGTTTCATTTGGGGTTGTGAGATATGGTTATCTGAGCCCAAGAGAGGAGGCAGAGTGCTGTCAGAGTCTCAAGGAGGGAGCAAAACTAGAATCTGAAAGAACAAGAGTCACAGAAGCTCAAGCGCATGAGCCAACTTCGAAACAGCTGGCAAATGTGATGAGGGTGAAGATGAGAAGTATAGATAAGGTTATCCATAACAGAAGAGAGTCACAAGAAAGGATCATCAAGAGCTATCGAGGACTTGTTGTCTCTGTTGCCAGCAGTTATCAAGGGAAAGGATTAAGCTTGGAGGACCTCATTCAGGAAGGGAGCATTGGACTTCTTCGAGGGGCAGAGAAGTTTGATCCTGAGAGAGGATTTAAATTATCAACATATGTGTATTGGTGGATTAGACAAGCTATCATCAGAGCCATAGAAAAGAAGTCTAGAATAATCAGATTACCAGGACACATTTGTGGAGTGATGGCAAAAATCACAAAAGCTAAAAATTCCTTCAACCAAAGATTTCACCGGCTGCCTAGTCACGAAGAAATTGCTGAAATGGTAAATATTCAAGCCTCAACTGTAAGACTTGTTTGTGAGAGGAGCAGACTCCCTCTTTCATTGGATCGAGTGGTGACTGATCAAGGTTGCATGGCACTCCAGGATATCATAAGAGGGCCGGATGAGATGATGCCAGGAACGATGCTTAGAAAACAGCTAATGAAGCAAGAGGTGGAGAAGCTTCTAAAGATGTTGAGTGATAGAGAAGCAAATGTATTGAGATTACACTTTGGACTAAATGGAGAGACCCCTCAGTCCTTTGAGGAAATAGGAAGATTGTTAGAACTTTCAAGGGAGAGGGTTCGACAGATCAACGGCATTGCATTATCAAAATTAAAGCAGACAAGTACTTTGGACAATCTAAAATTGTATATTGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000988 GO:0000990 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016987 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2000142 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sigma70_r2 Sigma70_r3 Sigma70_r4

Protein Analysis

459

Amino Acids

51.58

Weight (kDa)

9.43

Isoelectric Point (pI)

48.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sigma70_r2	PF04542	227 - 295	3.3e-23	Sigma-70 region 2
Sigma70_r3	PF04539	308 - 375	9.2e-11	Sigma-70 region 3
Sigma70_r4	PF04545	395 - 447	4.7e-12	Sigma-70, region 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005329)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13730
fragaria_vesca	FvH4_7g01630
malus_domestica	MD02G1302300.v1.1 MD07G1021800.v1.1
prunus_persica	Prupe.2G021900_v2.0.a1 Prupe.2G021900_v2.0.a1 Prupe.2G021900_v2.0.a1 Prupe.2G021900_v2.0.a1 Prupe.2G021900_v2.0.a1 Prupe.2G021900_v2.0.a1 Prupe.2G021900_v2.0.a1 Prupe.2G021900_v2.0.a1 Prupe.2G021900_v2.0.a1 Prupe.2G021900_v2.0.a1
pyrus_communis	pycom02g25460 pycom07g01650
rosa_chinensis	RchiOBHm_Chr1g0317901
rosa_laevigata	RLG00000029590 RLG00000030578
rosa_multiflora	Rmu_sc0000654.1_g000054 Rmu_ssc0000008.1_g000049
rosa_roxburghii	Rroxscaffold_4G00330140
rosa_rugosa	Rorug01G0018500
rosa_samantha	Rh1AG030000 Rh1BG026000 Rh1BG026100 Rh1CG028600 Rh1DG041500
rosa_wichuraiana	Rw1G002260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1252
AccB1I	GGYRCC	2 cut(s)	10, 203
AccII	CGCG	2 cut(s)	270, 299
AciI	CCGC	4 cut(s)	248, 297, 299, 302
AclWI	GGATC	3 cut(s)	683, 794, 1071
AcoI	YGGCCR	1 cut(s)	87
AcsI	RAATTY	2 cut(s)	197, 943
AcyI	GRCGYC	1 cut(s)	204
AfaI	GTAC	1 cut(s)	1348
AfiI	CCNNNNNNNGG	3 cut(s)	499, 757, 809
AgsI	TTSAA	4 cut(s)	446, 952, 1010, 1290
AhdI	GACNNNNNGTC	1 cut(s)	701
AjnI	CCWGG	3 cut(s)	898, 1098, 1132
AjuI	GAANNNNNNNTTGG	2 cut(s)	753, 785
AleI	CACNNNNGTG	1 cut(s)	909
AluBI	AGCT	9 cut(s)	242, 572, 601, 687, 741, 854, 938, 1156, 1180
AluI	AGCT	9 cut(s)	242, 572, 601, 687, 741, 854, 938, 1156, 1180
Alw26I	GTCTC	4 cut(s)	220, 527, 709, 1238
AlwI	GGATC	3 cut(s)	683, 794, 1071
AoxI	GGCC	2 cut(s)	87, 1115
ApeKI	GCWGC	3 cut(s)	242, 245, 970
ApoI	RAATTY	2 cut(s)	197, 943
ArsI	GACNNNNNNTTYG	2 cut(s)	1333, 1365
AspLEI	GCGC	4 cut(s)	206, 262, 272, 580
AspS9I	GGNCC	2 cut(s)	748, 1115
AsuHPI	GGTGA	8 cut(s)	85, 105, 153, 295, 316, 631, 956, 1084
AsuII	TTCGAA	1 cut(s)	593
AvaII	GGWCC	1 cut(s)	748
BalI	TGGCCA	1 cut(s)	89
BanI	GGYRCC	2 cut(s)	10, 203
BanII	GRGCYC	1 cut(s)	494
BbvI	GCAGC	3 cut(s)	229, 257, 957
BccI	CCATC	4 cut(s)	98, 164, 364, 913
BceAI	ACGGC	1 cut(s)	1330
BcgI	CGANNNNNNTGC	2 cut(s)	971, 1005
BciT130I	CCWGG	3 cut(s)	900, 1100, 1134
BclI	TGATCA	1 cut(s)	1078
BcoDI	GTCTC	4 cut(s)	220, 527, 709, 1238
BfaI	CTAG	3 cut(s)	542, 882, 975
BfmI	CTRYAG	1 cut(s)	243
BfoI	RGCGCY	2 cut(s)	207, 263
BisI	GCNGC	5 cut(s)	243, 246, 297, 300, 971
BlsI	GCNGC	5 cut(s)	244, 247, 298, 301, 972
BmcAI	AGTACT	1 cut(s)	1348
Bme1390I	CCNGG	3 cut(s)	900, 1100, 1134
Bme18I	GGWCC	1 cut(s)	748
BmeRI	GACNNNNNGTC	1 cut(s)	701
BmgT120I	GGNCC	2 cut(s)	748, 1115
BmiI	GGNNCC	2 cut(s)	12, 205
BmrFI	CCNGG	3 cut(s)	900, 1100, 1134
BmsI	GCATC	4 cut(s)	214, 283, 1119, 1131
BpmI	CTGGAG	2 cut(s)	202, 1082
Bpu14I	TTCGAA	1 cut(s)	593
BpuEI	CTTGAG	2 cut(s)	509, 558
BsaHI	GRCGYC	1 cut(s)	204
BsaI	GGTCTC	1 cut(s)	1238
BsaJI	CCNNGG	2 cut(s)	45, 297
BsaXI	ACNNNNNCTCC	4 cut(s)	200, 230, 494, 524
Bsc4I	CCNNNNNNNGG	3 cut(s)	499, 757, 809
Bse118I	RCCGGY	2 cut(s)	98, 966
Bse3DI	GCAATG	2 cut(s)	343, 1317
BseBI	CCWGG	3 cut(s)	900, 1100, 1134
BseDI	CCNNGG	2 cut(s)	45, 297
BseGI	GGATG	1 cut(s)	1126
BseLI	CCNNNNNNNGG	3 cut(s)	499, 757, 809
BseMI	GCAATG	2 cut(s)	343, 1317
BseMII	CTCAG	3 cut(s)	479, 795, 1265
BseRI	GAGGAG	8 cut(s)	181, 391, 403, 406, 409, 440, 515, 1054
BseXI	GCAGC	3 cut(s)	229, 257, 957
Bsh1236I	CGCG	2 cut(s)	270, 299
BshFI	GGCC	2 cut(s)	89, 1117
BshNI	GGYRCC	2 cut(s)	10, 203
BsiSI	CCGG	3 cut(s)	99, 967, 1118
BslFI	GGGAC	1 cut(s)	63
BslI	CCNNNNNNNGG	3 cut(s)	499, 757, 809
BsmAI	GTCTC	4 cut(s)	220, 527, 709, 1238
BsmFI	GGGAC	1 cut(s)	63
BsnI	GGCC	2 cut(s)	89, 1117
Bso31I	GGTCTC	1 cut(s)	1238
Bsp119I	TTCGAA	1 cut(s)	593
Bsp1286I	GDGCHC	1 cut(s)	494
Bsp143I	GATC	5 cut(s)	675, 799, 1063, 1078, 1308
BspACI	CCGC	4 cut(s)	248, 297, 299, 302
BspANI	GGCC	2 cut(s)	89, 1117
BspCNI	CTCAG	3 cut(s)	480, 796, 1264
BspFNI	CGCG	2 cut(s)	270, 299
BspLI	GGNNCC	2 cut(s)	12, 205
BspMAI	CTGCAG	1 cut(s)	247
BspPI	GGATC	3 cut(s)	683, 794, 1071
BspT104I	TTCGAA	1 cut(s)	593
BspT107I	GGYRCC	2 cut(s)	10, 203
BspTNI	GGTCTC	1 cut(s)	1238
BsrDI	GCAATG	2 cut(s)	343, 1317
BsrFI	RCCGGY	2 cut(s)	98, 966
BssAI	RCCGGY	2 cut(s)	98, 966
BssECI	CCNNGG	2 cut(s)	45, 297
BssMI	GATC	5 cut(s)	675, 799, 1063, 1078, 1308
BssNI	GRCGYC	1 cut(s)	204
BssT1I	CCWWGG	1 cut(s)	45
Bst2UI	CCWGG	3 cut(s)	900, 1100, 1134
Bst4CI	ACNGT	2 cut(s)	56, 1021
Bst6I	CTCTTC	4 cut(s)	75, 380, 428, 652
BstACI	GRCGYC	1 cut(s)	204
BstBI	TTCGAA	1 cut(s)	593
BstC8I	GCNNGC	4 cut(s)	264, 268, 603, 715
BstDEI	CTNAG	5 cut(s)	211, 488, 804, 1145, 1251
BstDSI	CCRYGG	1 cut(s)	297
BstEII	GGTNACC	1 cut(s)	283
BstENI	CCTNNNNNAGG	2 cut(s)	755, 807
BstF5I	GGATG	1 cut(s)	1126
BstFNI	CGCG	2 cut(s)	270, 299
BstH2I	RGCGCY	2 cut(s)	207, 263
BstHHI	GCGC	4 cut(s)	206, 262, 272, 580
BstKTI	GATC	5 cut(s)	678, 802, 1066, 1081, 1311
BstMAI	GTCTC	4 cut(s)	220, 527, 709, 1238
BstMBI	GATC	5 cut(s)	675, 799, 1063, 1078, 1308
BstMWI	GCNNNNNNNGC	2 cut(s)	251, 1162
BstNI	CCWGG	3 cut(s)	900, 1100, 1134
BstPI	GGTNACC	1 cut(s)	283
BstSCI	CCNGG	3 cut(s)	898, 1098, 1132
BstSFI	CTRYAG	1 cut(s)	243
BstUI	CGCG	2 cut(s)	270, 299
BstV1I	GCAGC	3 cut(s)	229, 257, 957
BsuRI	GGCC	2 cut(s)	89, 1117
BtgI	CCRYGG	1 cut(s)	297
BtgZI	GCGATG	1 cut(s)	237
BtsCI	GGATG	1 cut(s)	1126
BtsI	GCAGTG	2 cut(s)	76, 261
BtsIMutI	CAGTG	2 cut(s)	76, 261
Cac8I	GCNNGC	4 cut(s)	264, 268, 603, 715
CfoI	GCGC	4 cut(s)	206, 262, 272, 580
Cfr10I	RCCGGY	2 cut(s)	98, 966
Cfr13I	GGNCC	2 cut(s)	748, 1115
Cfr42I	CCGCGG	1 cut(s)	300
Csp6I	GTAC	1 cut(s)	1347
CspCI	CAANNNNNGTGG	2 cut(s)	325, 360
CviAII	CATG	2 cut(s)	581, 1090
CviQI	GTAC	1 cut(s)	1347
DdeI	CTNAG	5 cut(s)	211, 488, 804, 1145, 1251
DinI	GGCGCC	1 cut(s)	205
DpnI	GATC	5 cut(s)	677, 801, 1065, 1080, 1310
DpnII	GATC	5 cut(s)	675, 799, 1063, 1078, 1308
DraI	TTTAAA	1 cut(s)	817
DrdI	GACNNNNNNGTC	1 cut(s)	1252
DriI	GACNNNNNGTC	1 cut(s)	701
DseDI	GACNNNNNNGTC	1 cut(s)	1252
EaeI	YGGCCR	1 cut(s)	87
Eam1104I	CTCTTC	4 cut(s)	75, 380, 428, 652
Eam1105I	GACNNNNNGTC	1 cut(s)	701
EarI	CTCTTC	4 cut(s)	75, 380, 428, 652
Eco130I	CCWWGG	1 cut(s)	45
Eco24I	GRGCYC	1 cut(s)	494
Eco31I	GGTCTC	1 cut(s)	1238
Eco32I	GATATC	1 cut(s)	1105
Eco47I	GGWCC	1 cut(s)	748
Eco91I	GGTNACC	1 cut(s)	283
EcoNI	CCTNNNNNAGG	2 cut(s)	755, 807
EcoO109I	RGGNCCY	1 cut(s)	748
EcoO65I	GGTNACC	1 cut(s)	283
EcoRII	CCWGG	3 cut(s)	898, 1098, 1132
EcoRV	GATATC	1 cut(s)	1105
EcoT14I	CCWWGG	1 cut(s)	45
EcoT22I	ATGCAT	1 cut(s)	229
EcoT38I	GRGCYC	1 cut(s)	494
EgeI	GGCGCC	1 cut(s)	205
EheI	GGCGCC	1 cut(s)	205
ErhI	CCWWGG	1 cut(s)	45
FaeI	CATG	2 cut(s)	584, 1093
FaqI	GGGAC	1 cut(s)	63
FatI	CATG	2 cut(s)	580, 1089
FauNDI	CATATG	2 cut(s)	104, 829
FbaI	TGATCA	1 cut(s)	1078
Fnu4HI	GCNGC	5 cut(s)	243, 246, 297, 300, 971
FokI	GGATG	1 cut(s)	1133
FriOI	GRGCYC	1 cut(s)	494
Fsp4HI	GCNGC	5 cut(s)	243, 246, 297, 300, 971
FspBI	CTAG	3 cut(s)	542, 882, 975
GlaI	GCGC	4 cut(s)	205, 261, 271, 579
GluI	GCNGC	5 cut(s)	243, 246, 297, 300, 971
GsuI	CTGGAG	2 cut(s)	202, 1082
HaeII	RGCGCY	2 cut(s)	207, 263
HaeIII	GGCC	2 cut(s)	89, 1117
HapII	CCGG	3 cut(s)	99, 967, 1118
HhaI	GCGC	4 cut(s)	206, 262, 272, 580
Hin1I	GRCGYC	1 cut(s)	204
Hin1II	CATG	2 cut(s)	584, 1093
Hin6I	GCGC	4 cut(s)	204, 260, 270, 578
HinP1I	GCGC	4 cut(s)	204, 260, 270, 578
HindIII	AAGCTT	2 cut(s)	739, 1178
HinfI	GANTC	5 cut(s)	520, 545, 561, 662, 1047
HpaII	CCGG	3 cut(s)	99, 967, 1118
HphI	GGTGA	8 cut(s)	85, 105, 153, 295, 316, 631, 956, 1084
Hpy166II	GTNNAC	1 cut(s)	59
Hpy188I	TCNGA	5 cut(s)	489, 519, 550, 863, 893
Hpy188III	TCNNGA	5 cut(s)	682, 758, 803, 882, 980
Hpy8I	GTNNAC	1 cut(s)	59
HpyAV	CCTTC	3 cut(s)	305, 755, 958
HpyCH4III	ACNGT	2 cut(s)	56, 1021
HpyCH4V	TGCA	5 cut(s)	227, 245, 336, 1089, 1322
HpyF10VI	GCNNNNNNNGC	2 cut(s)	251, 1162
HpyF3I	CTNAG	5 cut(s)	211, 488, 804, 1145, 1251
Hsp92I	GRCGYC	1 cut(s)	204
Hsp92II	CATG	2 cut(s)	584, 1093
HspAI	GCGC	4 cut(s)	204, 260, 270, 578
KasI	GGCGCC	1 cut(s)	203
Ksp22I	TGATCA	1 cut(s)	1078
KspI	CCGCGG	1 cut(s)	300
Kzo9I	GATC	5 cut(s)	675, 799, 1063, 1078, 1308
LmnI	GCTCC	4 cut(s)	239, 533, 765, 1041
Lsp1109I	GCAGC	3 cut(s)	229, 257, 957
LweI	GCATC	4 cut(s)	214, 283, 1119, 1131
MaeI	CTAG	3 cut(s)	542, 882, 975
MaeIII	GTNAC	5 cut(s)	283, 562, 663, 977, 1072
MalI	GATC	5 cut(s)	677, 801, 1065, 1080, 1310
MboI	GATC	5 cut(s)	675, 799, 1063, 1078, 1308
MhlI	GDGCHC	1 cut(s)	494
MlsI	TGGCCA	1 cut(s)	89
MluCI	AATT	6 cut(s)	197, 818, 943, 987, 1331, 1364
MluNI	TGGCCA	1 cut(s)	89
Mly113I	GGCGCC	1 cut(s)	204
MlyI	GAGTC	4 cut(s)	529, 570, 671, 1041
MmeI	TCCRAC	2 cut(s)	152, 387
Mox20I	TGGCCA	1 cut(s)	89
Mph1103I	ATGCAT	1 cut(s)	229
MscI	TGGCCA	1 cut(s)	89
MseI	TTAA	3 cut(s)	737, 816, 1334
MslI	CAYNNNNRTG	1 cut(s)	909
Msp20I	TGGCCA	1 cut(s)	89
MspA1I	CMGCKG	3 cut(s)	248, 299, 601
MspI	CCGG	3 cut(s)	99, 967, 1118
MspR9I	CCNGG	3 cut(s)	900, 1100, 1134
MvaI	CCWGG	3 cut(s)	900, 1100, 1134
MvnI	CGCG	2 cut(s)	270, 299
MwoI	GCNNNNNNNGC	2 cut(s)	251, 1162
NarI	GGCGCC	1 cut(s)	204
NdeI	CATATG	2 cut(s)	104, 829
NdeII	GATC	5 cut(s)	675, 799, 1063, 1078, 1308
NlaIII	CATG	2 cut(s)	584, 1093
NlaIV	GGNNCC	2 cut(s)	12, 205
NmuCI	GTSAC	5 cut(s)	283, 562, 663, 977, 1072
NsiI	ATGCAT	1 cut(s)	229
NspV	TTCGAA	1 cut(s)	593
OliI	CACNNNNGTG	1 cut(s)	909
PfeI	GAWTC	1 cut(s)	545
PfoI	TCCNGGA	1 cut(s)	1098
PkrI	GCNGC	5 cut(s)	244, 247, 298, 301, 972
PleI	GAGTC	4 cut(s)	528, 569, 670, 1041
PluTI	GGCGCC	1 cut(s)	207
PpsI	GAGTC	4 cut(s)	528, 569, 670, 1041
PpuMI	RGGWCCY	1 cut(s)	748
Psp5II	RGGWCCY	1 cut(s)	748
Psp6I	CCWGG	3 cut(s)	898, 1098, 1132
PspEI	GGTNACC	1 cut(s)	283
PspGI	CCWGG	3 cut(s)	898, 1098, 1132
PspN4I	GGNNCC	2 cut(s)	12, 205
PspPI	GGNCC	2 cut(s)	748, 1115
PspPPI	RGGWCCY	1 cut(s)	748
PstI	CTGCAG	1 cut(s)	247
PvuII	CAGCTG	1 cut(s)	601
RsaI	GTAC	1 cut(s)	1348
RsaNI	GTAC	1 cut(s)	1347
RseI	CAYNNNNRTG	1 cut(s)	909
SacII	CCGCGG	1 cut(s)	300
SaqAI	TTAA	3 cut(s)	737, 816, 1334
SatI	GCNGC	5 cut(s)	243, 246, 297, 300, 971
Sau3AI	GATC	5 cut(s)	675, 799, 1063, 1078, 1308
Sau96I	GGNCC	2 cut(s)	748, 1115
ScaI	AGTACT	1 cut(s)	1348
SchI	GAGTC	4 cut(s)	529, 570, 671, 1041
ScrFI	CCNGG	3 cut(s)	900, 1100, 1134
SduI	GDGCHC	1 cut(s)	494
SfaNI	GCATC	4 cut(s)	214, 283, 1119, 1131
SfcI	CTRYAG	1 cut(s)	243
SfoI	GGCGCC	1 cut(s)	205
Sfr303I	CCGCGG	1 cut(s)	300
SfuI	TTCGAA	1 cut(s)	593
SgrBI	CCGCGG	1 cut(s)	300
SinI	GGWCC	1 cut(s)	748
SmiI	ATTTAAAT	1 cut(s)	817
SmiMI	CAYNNNNRTG	1 cut(s)	909
SmlI	CTYRAG	2 cut(s)	524, 573
SmoI	CTYRAG	2 cut(s)	524, 573
Sse9I	AATT	6 cut(s)	197, 818, 943, 987, 1331, 1364
SsiI	CCGC	4 cut(s)	248, 297, 299, 302
SspDI	GGCGCC	1 cut(s)	203
SspI	AATATT	1 cut(s)	1006
SspMI	CTAG	3 cut(s)	542, 882, 975
StyD4I	CCNGG	3 cut(s)	898, 1098, 1132
StyI	CCWWGG	1 cut(s)	45
SwaI	ATTTAAAT	1 cut(s)	817
TaaI	ACNGT	2 cut(s)	56, 1021
TaqI	TCGA	5 cut(s)	593, 691, 781, 1066, 1303
TasI	AATT	6 cut(s)	197, 818, 943, 987, 1331, 1364
TatI	WGTACW	1 cut(s)	1346
TauI	GCSGC	2 cut(s)	299, 302
TfiI	GAWTC	1 cut(s)	545
Tru1I	TTAA	3 cut(s)	737, 816, 1334
Tru9I	TTAA	3 cut(s)	737, 816, 1334
TscAI	CASTG	2 cut(s)	83, 261
TseFI	GTSAC	5 cut(s)	283, 562, 663, 977, 1072
TseI	GCWGC	3 cut(s)	242, 245, 970
Tsp45I	GTSAC	5 cut(s)	283, 562, 663, 977, 1072
TspDTI	ATGAA	4 cut(s)	99, 450, 1047, 1175
TspRI	CASTG	2 cut(s)	83, 261
VpaK11BI	GGWCC	1 cut(s)	748
XagI	CCTNNNNNAGG	2 cut(s)	755, 807
XapI	RAATTY	2 cut(s)	197, 943
XbaI	TCTAGA	1 cut(s)	881
XcmI	CCANNNNNNNNNTGG	1 cut(s)	226
XspI	CTAG	3 cut(s)	542, 882, 975
ZrmI	AGTACT	1 cut(s)	1348
Zsp2I	ATGCAT	1 cut(s)	229

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.