Rh2AG259000

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
29728591 .. 29728746
156 bp
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UTR
Exon/CDS
Intron
Rh2AG259000.1

Sequence Viewer

Length: 156 bp
ATGTGGAGCTTCTTTGCCGCCTCGCCGATCAAATCAGTCAGCGCCGCCTTAATGTTCATATGCACGTCTTCCCTATCAGTCCTCAATTCGCCTCTAAATCTCCGTACGCCCTTGATGAATGCTATCCCTACTCTCAACAGTGATGAATCCCTAATA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

52

Amino Acids

5.6

Weight (kDa)

5.82

Isoelectric Point (pI)

41.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 18, 45
AfaI GTAC 1 cut(s) 106
AjiI CACGTC 1 cut(s) 66
AluBI AGCT 1 cut(s) 9
AluI AGCT 1 cut(s) 9
AspLEI GCGC 1 cut(s) 44
BbsI GAAGAC 1 cut(s) 60
BfoI RGCGCY 1 cut(s) 45
BisI GCNGC 2 cut(s) 18, 45
BlsI GCNGC 2 cut(s) 19, 46
BmgBI CACGTC 1 cut(s) 66
BpiI GAAGAC 1 cut(s) 60
BsiWI CGTACG 1 cut(s) 104
BsmI GAATGC 1 cut(s) 124
Bsp143I GATC 1 cut(s) 27
BspACI CCGC 2 cut(s) 18, 45
BssMI GATC 1 cut(s) 27
Bst4CI ACNGT 1 cut(s) 140
BstH2I RGCGCY 1 cut(s) 45
BstHHI GCGC 1 cut(s) 44
BstKTI GATC 1 cut(s) 30
BstMBI GATC 1 cut(s) 27
BstV2I GAAGAC 1 cut(s) 60
BtrI CACGTC 1 cut(s) 66
BtsIMutI CAGTG 1 cut(s) 145
CfoI GCGC 1 cut(s) 44
Csp6I GTAC 1 cut(s) 105
CviJI RGCY 1 cut(s) 9
CviKI_1 RGCY 1 cut(s) 9
CviQI GTAC 1 cut(s) 105
DpnI GATC 1 cut(s) 29
DpnII GATC 1 cut(s) 27
FaiI YATR 2 cut(s) 59, 61
FauNDI CATATG 1 cut(s) 59
Fnu4HI GCNGC 2 cut(s) 18, 45
Fsp4HI GCNGC 2 cut(s) 18, 45
GlaI GCGC 1 cut(s) 43
GluI GCNGC 2 cut(s) 18, 45
HaeII RGCGCY 1 cut(s) 45
HhaI GCGC 1 cut(s) 44
Hin6I GCGC 1 cut(s) 42
HinP1I GCGC 1 cut(s) 42
HinfI GANTC 1 cut(s) 146
HpyCH4III ACNGT 1 cut(s) 140
HpyCH4IV ACGT 1 cut(s) 65
HpyCH4V TGCA 1 cut(s) 63
HpySE526I ACGT 1 cut(s) 65
HspAI GCGC 1 cut(s) 42
Kzo9I GATC 1 cut(s) 27
LmnI GCTCC 1 cut(s) 6
MaeII ACGT 1 cut(s) 65
MalI GATC 1 cut(s) 29
MboI GATC 1 cut(s) 27
MboII GAAGA 1 cut(s) 60
MluCI AATT 1 cut(s) 85
MnlI CCTC 3 cut(s) 31, 92, 102
MseI TTAA 1 cut(s) 50
Mva1269I GAATGC 1 cut(s) 124
NdeI CATATG 1 cut(s) 59
NdeII GATC 1 cut(s) 27
PctI GAATGC 1 cut(s) 124
PfeI GAWTC 1 cut(s) 146
Pfl23II CGTACG 1 cut(s) 104
PkrI GCNGC 2 cut(s) 19, 46
PspLI CGTACG 1 cut(s) 104
RsaI GTAC 1 cut(s) 106
RsaNI GTAC 1 cut(s) 105
SaqAI TTAA 1 cut(s) 50
SatI GCNGC 2 cut(s) 18, 45
Sau3AI GATC 1 cut(s) 27
SetI ASST 2 cut(s) 11, 68
SgeI CNNG 3 cut(s) 34, 76, 124
Sse9I AATT 1 cut(s) 85
SsiI CCGC 2 cut(s) 18, 45
TaaI ACNGT 1 cut(s) 140
TaiI ACGT 1 cut(s) 68
TasI AATT 1 cut(s) 85
TauI GCSGC 2 cut(s) 20, 47
TfiI GAWTC 1 cut(s) 146
Tru1I TTAA 1 cut(s) 50
Tru9I TTAA 1 cut(s) 50
TscAI CASTG 1 cut(s) 145
TspDTI ATGAA 2 cut(s) 46, 131
TspGWI ACGGA 1 cut(s) 92
TspRI CASTG 1 cut(s) 145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.