Rh2AG462300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
68033392 .. 68033685
294 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG462300.1

Sequence Viewer

Length: 294 bp
ATGAGTTATGATGCTGTGGTGACTGTAGCAGCATTTGGTGGTGCCTTGCTAGGAGAAGTTGTTGGAGTTACACTAGCAATTACTACTGTGGCAACTGCTGGATTTGCGTTGATGGCAGGAATAATAACTAGCTTTGCAGGAGCTTATCTTATTGGAGAATTCGCTGGTTGGTTGATCGATTCTATTTTTGCAGGAACTTATGACAGTTTAAGCACAGAGGGCTATCGATGTTACGTAGTAGAGCTGCCTGATGTCAAGGCTCTTGCTCGTCAACTTGTGCATCAGAGCAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

97

Amino Acids

10.07

Weight (kDa)

4.28

Isoelectric Point (pI)

27.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018091)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 41
AcsI RAATTY 1 cut(s) 158
AluBI AGCT 3 cut(s) 132, 143, 244
AluI AGCT 3 cut(s) 132, 143, 244
ApeKI GCWGC 2 cut(s) 29, 244
ApoI RAATTY 1 cut(s) 158
AsuHPI GGTGA 1 cut(s) 31
BanI GGYRCC 1 cut(s) 41
BbvI GCAGC 2 cut(s) 41, 231
BccI CCATC 1 cut(s) 106
BfaI CTAG 3 cut(s) 50, 74, 129
BfmI CTRYAG 1 cut(s) 24
BisI GCNGC 2 cut(s) 30, 245
BlsI GCNGC 2 cut(s) 31, 246
BmiI GGNNCC 1 cut(s) 43
BmsI GCATC 1 cut(s) 289
Bsa29I ATCGAT 2 cut(s) 177, 226
BsaAI YACGTR 1 cut(s) 235
BsaXI ACNNNNNCTCC 2 cut(s) 45, 75
BseCI ATCGAT 2 cut(s) 177, 226
BseXI GCAGC 2 cut(s) 41, 231
BshNI GGYRCC 1 cut(s) 41
BshVI ATCGAT 2 cut(s) 177, 226
Bsp143I GATC 1 cut(s) 174
BspDI ATCGAT 2 cut(s) 177, 226
BspLI GGNNCC 1 cut(s) 43
BspT107I GGYRCC 1 cut(s) 41
BssMI GATC 1 cut(s) 174
Bst4CI ACNGT 3 cut(s) 25, 88, 206
BstBAI YACGTR 1 cut(s) 235
BstKTI GATC 1 cut(s) 177
BstMBI GATC 1 cut(s) 174
BstMWI GCNNNNNNNGC 3 cut(s) 104, 113, 219
BstSFI CTRYAG 1 cut(s) 24
BstSNI TACGTA 1 cut(s) 235
BstV1I GCAGC 2 cut(s) 41, 231
Bsu15I ATCGAT 2 cut(s) 177, 226
BsuTUI ATCGAT 2 cut(s) 177, 226
ClaI ATCGAT 2 cut(s) 177, 226
CviJI RGCY 5 cut(s) 132, 143, 222, 244, 260
CviKI_1 RGCY 5 cut(s) 132, 143, 222, 244, 260
DpnI GATC 1 cut(s) 176
DpnII GATC 1 cut(s) 174
Eco105I TACGTA 1 cut(s) 235
EcoRI GAATTC 1 cut(s) 158
FaiI YATR 2 cut(s) 9, 201
Fnu4HI GCNGC 2 cut(s) 30, 245
Fsp4HI GCNGC 2 cut(s) 30, 245
FspBI CTAG 3 cut(s) 50, 74, 129
GluI GCNGC 2 cut(s) 30, 245
HincII GTYRAC 1 cut(s) 272
HindII GTYRAC 1 cut(s) 272
HinfI GANTC 1 cut(s) 179
HphI GGTGA 1 cut(s) 31
Hpy166II GTNNAC 1 cut(s) 272
Hpy188I TCNGA 1 cut(s) 285
Hpy8I GTNNAC 1 cut(s) 272
HpyCH4III ACNGT 3 cut(s) 25, 88, 206
HpyCH4IV ACGT 1 cut(s) 234
HpyCH4V TGCA 3 cut(s) 137, 191, 280
HpyF10VI GCNNNNNNNGC 3 cut(s) 104, 113, 219
HpySE526I ACGT 1 cut(s) 234
Kzo9I GATC 1 cut(s) 174
LmnI GCTCC 1 cut(s) 140
LpnPI CCDG 6 cut(s) 84, 102, 123, 150, 177, 261
Lsp1109I GCAGC 2 cut(s) 41, 231
LweI GCATC 1 cut(s) 289
MaeI CTAG 3 cut(s) 50, 74, 129
MaeII ACGT 1 cut(s) 234
MaeIII GTNAC 3 cut(s) 19, 67, 230
MalI GATC 1 cut(s) 176
MboI GATC 1 cut(s) 174
MluCI AATT 3 cut(s) 78, 158, 289
MmeI TCCRAC 1 cut(s) 43
MnlI CCTC 1 cut(s) 211
MseI TTAA 1 cut(s) 209
MwoI GCNNNNNNNGC 3 cut(s) 104, 113, 219
NdeII GATC 1 cut(s) 174
NlaIV GGNNCC 1 cut(s) 43
NmuCI GTSAC 1 cut(s) 19
PfeI GAWTC 1 cut(s) 179
PkrI GCNGC 2 cut(s) 31, 246
Ppu21I YACGTR 1 cut(s) 235
PspN4I GGNNCC 1 cut(s) 43
SaqAI TTAA 1 cut(s) 209
SatI GCNGC 2 cut(s) 30, 245
Sau3AI GATC 1 cut(s) 174
SetI ASST 4 cut(s) 134, 145, 237, 246
SfaNI GCATC 1 cut(s) 289
SfcI CTRYAG 1 cut(s) 24
SnaBI TACGTA 1 cut(s) 235
Sse9I AATT 3 cut(s) 78, 158, 289
SspMI CTAG 3 cut(s) 50, 74, 129
TaaI ACNGT 3 cut(s) 25, 88, 206
TaiI ACGT 1 cut(s) 237
TaqI TCGA 2 cut(s) 177, 226
TasI AATT 3 cut(s) 78, 158, 289
TfiI GAWTC 1 cut(s) 179
Tru1I TTAA 1 cut(s) 209
Tru9I TTAA 1 cut(s) 209
TseFI GTSAC 1 cut(s) 19
TseI GCWGC 2 cut(s) 29, 244
Tsp45I GTSAC 1 cut(s) 19
XapI RAATTY 1 cut(s) 158
XspI CTAG 3 cut(s) 50, 74, 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.