Rh2BG348400

Monoglyceride

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0016974
Physical Location & Seq
Reverse (-)
46917605 .. 46918512
908 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG348400.1

Sequence Viewer

Length: 333 bp
ATGAATGGTGCTTCAGAAATTGATGAGTATTTGATTTTAATCCTTGAGAGTGAAATTTCAGATTGCATTTTCAACAATGTTGCTATGGATGAGCGGTTTAAGGAGGAAAGTGAATATTGTCATGGTGGCAGTGATGGATTGCATGGCTATGTTCCTTCACTTGACCATGTTGTTGCTGATACTGGGGATTTCTTGGAAAAGATTAGATTACAGAACCCTGGAGCACCGTGCTTCCTCTTTGGTCACTCAACTGGAGGAGCTGTGGTTTTGAAGGCGGCAACCTATGCTAAAATTGAAGAAAAGGTGGAAGGTATAATACTGACCTCACCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00561 ko01100 ko04714 ko04723 ko04923 map00561 map01100 map04714 map04723 map04923
Pfam Domains
Protein Families
Hydrolase_4

Protein Analysis

110

Amino Acids

11.95

Weight (kDa)

4.45

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 41 - 110 7e-19 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 94
AciI CCGC 2 cut(s) 94, 275
AcsI RAATTY 1 cut(s) 54
AgsI TTSAA 3 cut(s) 73, 271, 296
AjnI CCWGG 1 cut(s) 217
AluBI AGCT 1 cut(s) 260
AluI AGCT 1 cut(s) 260
Alw21I GWGCWC 1 cut(s) 226
ApoI RAATTY 1 cut(s) 54
AsuHPI GGTGA 1 cut(s) 318
BarI GAAGNNNNNNTAC 2 cut(s) 300, 332
Bbv12I GWGCWC 1 cut(s) 226
BccI CCATC 1 cut(s) 128
BciT130I CCWGG 1 cut(s) 219
BisI GCNGC 1 cut(s) 276
BlsI GCNGC 1 cut(s) 277
Bme1390I CCNGG 1 cut(s) 219
BmrFI CCNGG 1 cut(s) 219
BmrI ACTGGG 1 cut(s) 192
BmuI ACTGGG 1 cut(s) 192
BpmI CTGGAG 2 cut(s) 240, 273
BpuEI CTTGAG 1 cut(s) 65
BsaBI GATNNNNATC 1 cut(s) 38
BsaJI CCNNGG 1 cut(s) 217
BsaXI ACNNNNNCTCC 4 cut(s) 246, 249, 276, 279
Bse1I ACTGG 2 cut(s) 187, 256
Bse8I GATNNNNATC 1 cut(s) 38
BseBI CCWGG 1 cut(s) 219
BseDI CCNNGG 1 cut(s) 217
BseGI GGATG 1 cut(s) 94
BseJI GATNNNNATC 1 cut(s) 38
BseNI ACTGG 2 cut(s) 187, 256
BseRI GAGGAG 1 cut(s) 270
BsiHKAI GWGCWC 1 cut(s) 226
Bsp1286I GDGCHC 1 cut(s) 226
BspACI CCGC 2 cut(s) 94, 275
BsrBI CCGCTC 1 cut(s) 94
BsrI ACTGG 2 cut(s) 187, 256
BssECI CCNNGG 1 cut(s) 217
Bst2UI CCWGG 1 cut(s) 219
Bst4CI ACNGT 1 cut(s) 228
BstAPI GCANNNNNTGC 1 cut(s) 284
BstF5I GGATG 1 cut(s) 94
BstMWI GCNNNNNNNGC 1 cut(s) 284
BstNI CCWGG 1 cut(s) 219
BstSCI CCNGG 1 cut(s) 217
BtsCI GGATG 1 cut(s) 94
BtsI GCAGTG 1 cut(s) 136
BtsIMutI CAGTG 1 cut(s) 136
CviAII CATG 3 cut(s) 122, 143, 167
CviJI RGCY 2 cut(s) 147, 260
CviKI_1 RGCY 2 cut(s) 147, 260
EcoRII CCWGG 1 cut(s) 217
FaeI CATG 3 cut(s) 125, 146, 170
FaiI YATR 7 cut(s) 86, 123, 144, 150, 168, 285, 314
FatI CATG 3 cut(s) 121, 142, 166
Fnu4HI GCNGC 1 cut(s) 276
FokI GGATG 1 cut(s) 101
Fsp4HI GCNGC 1 cut(s) 276
GluI GCNGC 1 cut(s) 276
GsuI CTGGAG 2 cut(s) 240, 273
Hin1II CATG 3 cut(s) 125, 146, 170
HphI GGTGA 1 cut(s) 318
Hpy188I TCNGA 2 cut(s) 16, 61
HpyAV CCTTC 3 cut(s) 165, 265, 302
HpyCH4III ACNGT 1 cut(s) 228
HpyCH4V TGCA 2 cut(s) 66, 142
HpyF10VI GCNNNNNNNGC 1 cut(s) 284
Hsp92II CATG 3 cut(s) 125, 146, 170
LmnI GCTCC 2 cut(s) 221, 257
LpnPI CCDG 4 cut(s) 168, 204, 231, 237
MaeIII GTNAC 1 cut(s) 242
MbiI CCGCTC 1 cut(s) 94
MboII GAAGA 1 cut(s) 308
MhlI GDGCHC 1 cut(s) 226
MluCI AATT 3 cut(s) 18, 54, 291
MnlI CCTC 3 cut(s) 97, 245, 248
MseI TTAA 3 cut(s) 38, 99, 331
MslI CAYNNNNRTG 1 cut(s) 147
MspR9I CCNGG 1 cut(s) 219
MvaI CCWGG 1 cut(s) 219
MwoI GCNNNNNNNGC 1 cut(s) 284
NlaIII CATG 3 cut(s) 125, 146, 170
NmuCI GTSAC 1 cut(s) 242
PkrI GCNGC 1 cut(s) 277
Psp6I CCWGG 1 cut(s) 217
PspGI CCWGG 1 cut(s) 217
RseI CAYNNNNRTG 1 cut(s) 147
SaqAI TTAA 3 cut(s) 38, 99, 331
SatI GCNGC 1 cut(s) 276
ScrFI CCNGG 1 cut(s) 219
SduI GDGCHC 1 cut(s) 226
SetI ASST 6 cut(s) 262, 284, 306, 313, 326, 331
SmiMI CAYNNNNRTG 1 cut(s) 147
SmlI CTYRAG 1 cut(s) 44
SmoI CTYRAG 1 cut(s) 44
Sse9I AATT 3 cut(s) 18, 54, 291
SsiI CCGC 2 cut(s) 94, 275
SspI AATATT 1 cut(s) 116
StyD4I CCNGG 1 cut(s) 217
TaaI ACNGT 1 cut(s) 228
TasI AATT 3 cut(s) 18, 54, 291
TauI GCSGC 1 cut(s) 278
Tru1I TTAA 3 cut(s) 38, 99, 331
Tru9I TTAA 3 cut(s) 38, 99, 331
TscAI CASTG 1 cut(s) 136
TseFI GTSAC 1 cut(s) 242
Tsp45I GTSAC 1 cut(s) 242
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 136
XapI RAATTY 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.